Citrus Sinensis ID: 001568
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1051 | 2.2.26 [Sep-21-2011] | |||||||
| Q42883 | 1048 | Calcium-transporting ATPa | N/A | no | 0.995 | 0.998 | 0.818 | 0.0 | |
| O23087 | 1054 | Calcium-transporting ATPa | yes | no | 0.993 | 0.990 | 0.783 | 0.0 | |
| Q9XES1 | 1061 | Calcium-transporting ATPa | no | no | 0.968 | 0.959 | 0.663 | 0.0 | |
| P92939 | 1061 | Calcium-transporting ATPa | no | no | 0.967 | 0.958 | 0.665 | 0.0 | |
| Q7PPA5 | 1018 | Calcium-transporting ATPa | yes | no | 0.917 | 0.946 | 0.491 | 0.0 | |
| Q9YGL9 | 1042 | Sarcoplasmic/endoplasmic | yes | no | 0.914 | 0.922 | 0.486 | 0.0 | |
| Q03669 | 1041 | Sarcoplasmic/endoplasmic | no | no | 0.918 | 0.926 | 0.492 | 0.0 | |
| P11607 | 1042 | Sarcoplasmic/endoplasmic | yes | no | 0.921 | 0.928 | 0.493 | 0.0 | |
| P22700 | 1020 | Calcium-transporting ATPa | yes | no | 0.918 | 0.946 | 0.487 | 0.0 | |
| P16615 | 1042 | Sarcoplasmic/endoplasmic | yes | no | 0.923 | 0.931 | 0.492 | 0.0 |
| >sp|Q42883|ECAP_SOLLC Calcium-transporting ATPase, endoplasmic reticulum-type OS=Solanum lycopersicum GN=LCA1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1771 bits (4586), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 857/1047 (81%), Positives = 951/1047 (90%), Gaps = 1/1047 (0%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
MEEKPFPAWSW+V+QCLKEY VKL+KGLS+ EV+KRRERYG NEL+KEKGKPLW+LVLEQ
Sbjct: 1 MEEKPFPAWSWSVDQCLKEYQVKLEKGLSTYEVDKRRERYGLNELEKEKGKPLWRLVLEQ 60
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
FDDTLVKILL AAFISF+LAY + ++G+SGFE YVEPLVI+ ILVLNAIVGVWQESNAE
Sbjct: 61 FDDTLVKILLGAAFISFVLAYVNQDETGESGFEAYVEPLVILWILVLNAIVGVWQESNAE 120
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
KALEALK++Q ES KVLRDGYLVPD PA LVPGDIVEL VGDKVPADMRVA LK+S+LR
Sbjct: 121 KALEALKEMQGESAKVLRDGYLVPDFPAKELVPGDIVELRVGDKVPADMRVATLKSSTLR 180
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
VEQSSLTGE+MP+ K T + DDCELQAKENMVFAGTTVVNGSC+CIV+NTGM TEIGK
Sbjct: 181 VEQSSLTGESMPVTKSTDFLATDDCELQAKENMVFAGTTVVNGSCICIVVNTGMCTEIGK 240
Query: 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANV 300
IQ+QIHDAS+EESDTPL+KKLDEFGNRLT AIG+VCLVVW +NY+ FLSW+VVD WP++
Sbjct: 241 IQRQIHDASMEESDTPLKKKLDEFGNRLTFAIGVVCLVVWAINYKYFLSWEVVDDWPSDF 300
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
+FSFEKC YYFKIAVALAVAAIPEGLP+VITTCLALGTRKMAQKNAIVRKL SVETLGCT
Sbjct: 301 RFSFEKCAYYFKIAVALAVAAIPEGLPSVITTCLALGTRKMAQKNAIVRKLQSVETLGCT 360
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMSV+EFFTLGRKTT R+F VEGTTYDPKDGGI++W C MDANL
Sbjct: 361 TVICSDKTGTLTTNQMSVSEFFTLGRKTTACRVFGVEGTTYDPKDGGIMNWNCCKMDANL 420
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
MA+ICA+CNDAGV+CDG LF+ATGLPTEAALKVLVEKMG PD K R KI D Q+ ++Y
Sbjct: 421 LLMAEICAICNDAGVFCDGRLFKATGLPTEAALKVLVEKMGVPDSKARCKIRDAQIVSSY 480
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
LID +TV+LGCC+WW KRSKRVATLEFDR+RKSM VIVREP G N+LLVKG+ ESLLERS
Sbjct: 481 LIDRNTVKLGCCDWWMKRSKRVATLEFDRVRKSMGVIVREPNGSNRLLVKGAFESLLERS 540
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
++VQLADGS VPLDE C QL+L + LEMSSKGLRCLG+AYKD+LGE S YY+ +HPAHKK
Sbjct: 541 TYVQLADGSTVPLDESCRQLLLLKQLEMSSKGLRCLGLAYKDDLGELSGYYAATHPAHKK 600
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDPSCYS+IESDLVFVGVVGLRDPPR V +A++DCR AGI++MVITGDNKSTAEA+CR
Sbjct: 601 LLDPSCYSSIESDLVFVGVVGLRDPPREEVHRAVNDCRRAGIKIMVITGDNKSTAEAVCR 660
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+I+LFS E+L G SFTGKEFMA SS QQIE LS+ GGKVFSRAEPRHKQEIVRMLKEMG
Sbjct: 661 EIQLFSNGENLRGSSFTGKEFMAFSSQQQIEILSQDGGKVFSRAEPRHKQEIVRMLKEMG 720
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIY 780
E+VAMTGDGVNDAPALKLADIG+AMGITGTEVAKEASDMVLADDNF +IVSAVAEGRSIY
Sbjct: 721 EIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIY 780
Query: 781 NNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADV 840
NNMKAFIRYMISSNVGEVISIFLTA LGIPECLIPVQLLWVNLVTDGPPATALGFNPADV
Sbjct: 781 NNMKAFIRYMISSNVGEVISIFLTAVLGIPECLIPVQLLWVNLVTDGPPATALGFNPADV 840
Query: 841 DIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLV 900
DIMQKPPRK DALINSWV RY+VIGSYVGIATVGIF++WYT+ SF+GIN+V DGHTLV
Sbjct: 841 DIMQKPPRKNTDALINSWVFFRYMVIGSYVGIATVGIFIVWYTQASFLGINIVSDGHTLV 900
Query: 901 TLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMF 960
L QLRNWGECSTW+NFTV+P+ G ++ITFS+PC+YFT+GKVKAMTLSLSVLVAIEMF
Sbjct: 901 ELSQLRNWGECSTWTNFTVSPFK-AGNRLITFSDPCEYFTVGKVKAMTLSLSVLVAIEMF 959
Query: 961 NSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLV 1020
NSLNALSEDNSL+ MPPWRNPWLLVAMS+S LH +ILYVPFLAD+FG+VPL+L EW LV
Sbjct: 960 NSLNALSEDNSLIKMPPWRNPWLLVAMSLSFALHSVILYVPFLADIFGIVPLSLYEWLLV 1019
Query: 1021 ILVSAPVILIDEVLKFVGRNRRLSGKK 1047
IL+SAPVILIDEVLKFVGR RR + K
Sbjct: 1020 ILLSAPVILIDEVLKFVGRRRRRTKLK 1046
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to an endomembrane compartment. Solanum lycopersicum (taxid: 4081) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|O23087|ECA2_ARATH Calcium-transporting ATPase 2, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1696 bits (4391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 823/1051 (78%), Positives = 934/1051 (88%), Gaps = 7/1051 (0%)
Query: 2 EEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQF 61
EEK F AWSW+VEQCLKEY +LDKGL+S +V+ RR++YG+NEL KEKGKPLW LVLEQF
Sbjct: 3 EEKSFSAWSWSVEQCLKEYKTRLDKGLTSEDVQIRRQKYGFNELAKEKGKPLWHLVLEQF 62
Query: 62 DDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEK 121
DDTLVKILL AAFISF+LA+ SGFE +VEP VIVLIL+LNA+VGVWQESNAEK
Sbjct: 63 DDTLVKILLGAAFISFVLAFLGEEHGSGSGFEAFVEPFVIVLILILNAVVGVWQESNAEK 122
Query: 122 ALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRV 181
ALEALK++QCES KVLRDG ++P+LPA LVPGDIVEL VGDKVPADMRV+ LKTS+LRV
Sbjct: 123 ALEALKEMQCESAKVLRDGNVLPNLPARELVPGDIVELNVGDKVPADMRVSGLKTSTLRV 182
Query: 182 EQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKI 241
EQSSLTGEAMP+LKG + V +DDCELQ KENMVFAGTTVVNGSCVCIV + GM+TEIGKI
Sbjct: 183 EQSSLTGEAMPVLKGANLVVMDDCELQGKENMVFAGTTVVNGSCVCIVTSIGMDTEIGKI 242
Query: 242 QKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGW-PANV 300
Q+QIH+ASLEES+TPL+KKLDEFG+RLTTAI +VC++VW++NY+NF+SWDVVDG+ P N+
Sbjct: 243 QRQIHEASLEESETPLKKKLDEFGSRLTTAICIVCVLVWMINYKNFVSWDVVDGYKPVNI 302
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
+FSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT
Sbjct: 303 KFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 362
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMS TEFFTLG KTT +R+F V GTTYDPKDGGIVDW C NMDANL
Sbjct: 363 TVICSDKTGTLTTNQMSATEFFTLGGKTTTTRVFSVSGTTYDPKDGGIVDWGCNNMDANL 422
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
QA+A+IC++CNDAGV+ +G LFRATGLPTEAALKVLVEKMG P+ K I + N+
Sbjct: 423 QAVAEICSICNDAGVFYEGKLFRATGLPTEAALKVLVEKMGIPEKKNSENIEE---VTNF 479
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
+ S+V+L CC+WW KRSK+VATLEFDR+RKSMSVIV EP G N+LLVKG+ ES+LERS
Sbjct: 480 SDNGSSVKLACCDWWNKRSKKVATLEFDRVRKSMSVIVSEPNGQNRLLVKGAAESILERS 539
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
S QLADGS+V LDE +++L +H EM+SKGLRCLG+AYKDELGEFSDY SE HP+HKK
Sbjct: 540 SFAQLADGSLVALDESSREVILKKHSEMTSKGLRCLGLAYKDELGEFSDYSSEEHPSHKK 599
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDPS YS IE++L+FVGVVGLRDPPR V +AI+DCR AGI VMVITGDNKSTAEAIC
Sbjct: 600 LLDPSSYSNIETNLIFVGVVGLRDPPREEVGRAIEDCRDAGIRVMVITGDNKSTAEAICC 659
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+I+LFS NEDL+ SFTGKEFM+L ++++ E LSK GGKVFSRAEPRHKQEIVRMLKEMG
Sbjct: 660 EIRLFSENEDLSQSSFTGKEFMSLPASRRSEILSKSGGKVFSRAEPRHKQEIVRMLKEMG 719
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIY 780
E+VAMTGDGVNDAPALKLADIG+AMGITGTEVAKEASDMVLADDNF +IVSAVAEGRSIY
Sbjct: 720 EIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIY 779
Query: 781 NNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADV 840
NNMKAFIRYMISSNVGEVISIFLTAALGIPEC+IPVQLLWVNLVTDGPPATALGFNPAD+
Sbjct: 780 NNMKAFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADI 839
Query: 841 DIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLV 900
DIM+KPPRK DD LI+SWVL+RYLVIGSYVG+ATVGIFVLWYT+ SF+GI+L+ DGHTLV
Sbjct: 840 DIMKKPPRKSDDCLIDSWVLIRYLVIGSYVGVATVGIFVLWYTQASFLGISLISDGHTLV 899
Query: 901 TLPQLRNWGECSTW-SNFTVAPYAVGGG-QMITF-SNPCDYFTIGKVKAMTLSLSVLVAI 957
+ QL+NW ECS+W +NFT PY V GG + I F +NPCDYFT+GKVK MTLSL+VLVAI
Sbjct: 900 SFTQLQNWSECSSWGTNFTATPYTVAGGLRTIAFENNPCDYFTLGKVKPMTLSLTVLVAI 959
Query: 958 EMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEW 1017
EMFNSLNALSEDNSL+TMPPWRNPWLLVAM+VS LHC+ILYVPFLA+VFG+VPL+ EW
Sbjct: 960 EMFNSLNALSEDNSLLTMPPWRNPWLLVAMTVSFALHCVILYVPFLANVFGIVPLSFREW 1019
Query: 1018 FLVILVSAPVILIDEVLKFVGRNRRLSGKKE 1048
F+VILVS PVILIDE LKF+GR RR KK+
Sbjct: 1020 FVVILVSFPVILIDEALKFIGRCRRTRIKKK 1050
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to an endomembrane compartment. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9XES1|ECA4_ARATH Calcium-transporting ATPase 4, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1374 bits (3557), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 687/1035 (66%), Positives = 822/1035 (79%), Gaps = 17/1035 (1%)
Query: 6 FPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTL 65
FPAW V +C +++ V +KGLS+ EV KR + YG NEL+K +G +++L+LEQF+DTL
Sbjct: 24 FPAWGKDVSECEEKFGVSREKGLSTDEVLKRHQIYGLNELEKPEGTSIFKLILEQFNDTL 83
Query: 66 VKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEA 125
V+ILL AA ISF+LA+F + G+ G +VEPLVI LIL++NAIVG+WQE+NAEKALEA
Sbjct: 84 VRILLAAAVISFVLAFFDGDEGGEMGITAFVEPLVIFLILIVNAIVGIWQETNAEKALEA 143
Query: 126 LKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSS 185
LK+IQ + V+RDG V LPA LVPGDIVEL VGDKVPADMRV AL +S+LRVEQ S
Sbjct: 144 LKEIQSQQATVMRDGTKVSSLPAKELVPGDIVELRVGDKVPADMRVVALISSTLRVEQGS 203
Query: 186 LTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQI 245
LTGE+ + K T V ++ ++Q K+ MVFAGTTVVNG+C+C+V +TGMNTEIG++ QI
Sbjct: 204 LTGESEAVSKTTKHVD-ENADIQGKKCMVFAGTTVVNGNCICLVTDTGMNTEIGRVHSQI 262
Query: 246 HDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFE 305
+A+ E DTPL+KKL+EFG LT IGL+C +VW++N + FLSW+ VDGWP N +FSFE
Sbjct: 263 QEAAQHEEDTPLKKKLNEFGEVLTMIIGLICALVWLINVKYFLSWEYVDGWPRNFKFSFE 322
Query: 306 KCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICS 365
KCTYYF+IAVALAVAAIPEGLPAVITTCLALGTRKMAQKNA+VRKLPSVETLGCTTVICS
Sbjct: 323 KCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICS 382
Query: 366 DKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAK 425
DKTGTLTTNQM+V++ +G + R F+VEGT++DP+DG I DWP MDANLQ +AK
Sbjct: 383 DKTGTLTTNQMAVSKLVAMGSRIGTLRSFNVEGTSFDPRDGKIEDWPTGRMDANLQMIAK 442
Query: 426 ICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSS 485
I A+CNDA V F + G+PTEAALKVLVEKMGFP+ G N+ S D +
Sbjct: 443 IAAICNDANVEKSDQQFVSRGMPTEAALKVLVEKMGFPE--GLNEASS---------DGN 491
Query: 486 TVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQL 545
+R CC W++ +R+ATLEFDR RKSM V+V +G LLVKG+VE++LERS+H+QL
Sbjct: 492 VLR--CCRLWSELEQRIATLEFDRDRKSMGVMVDSSSGKKLLLVKGAVENVLERSTHIQL 549
Query: 546 ADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYY-SESHPAHKKLLDP 604
DGS LD+ L+L +MS LRCLG AY D +F+ Y SE HPAH++LL+P
Sbjct: 550 LDGSTRELDQYSRDLILQSLHDMSLSALRCLGFAYSDVPSDFATYDGSEDHPAHQQLLNP 609
Query: 605 SCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKL 664
S YS+IES+LVFVG VGLRDPPR V +AI DCR AGI VMVITGDNKSTAEAICR+I +
Sbjct: 610 SNYSSIESNLVFVGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKSTAEAICREIGV 669
Query: 665 FSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVA 724
F +ED++ RS TGKEFM + Q L + GG +FSRAEP+HKQEIVR+LKE GEVVA
Sbjct: 670 FEADEDISSRSLTGKEFMDVK--DQKNHLRQTGGLLFSRAEPKHKQEIVRLLKEDGEVVA 727
Query: 725 MTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMK 784
MTGDGVNDAPALKLADIGVAMGI+GTEVAKEASD+VLADDNF +IV+AV EGRSIYNNMK
Sbjct: 728 MTGDGVNDAPALKLADIGVAMGISGTEVAKEASDLVLADDNFSTIVAAVGEGRSIYNNMK 787
Query: 785 AFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQ 844
AFIRYMISSN+GEV SIFLTAALGIPE +IPVQLLWVNLVTDGPPATALGFNP D DIM+
Sbjct: 788 AFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMK 847
Query: 845 KPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQ 904
KPPR+ DD+LI +W+L RY+VIG YVG+ATVG+F++WYT SFMGI+L DGH+LV+ Q
Sbjct: 848 KPPRRSDDSLITAWILFRYMVIGLYVGVATVGVFIIWYTHNSFMGIDLSQDGHSLVSYSQ 907
Query: 905 LRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMFNSLN 964
L +WG+CS+W F V+P+ G SNPCDYF GK+KA TLSLSVLVAIEMFNSLN
Sbjct: 908 LAHWGQCSSWEGFKVSPFTAGSQTFSFDSNPCDYFQQGKIKASTLSLSVLVAIEMFNSLN 967
Query: 965 ALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLVILVS 1024
ALSED SLVTMPPW NPWLL+AM+VS GLH +ILYVPFLA VFG+VPL+LNEW LV+ VS
Sbjct: 968 ALSEDGSLVTMPPWVNPWLLLAMAVSFGLHFVILYVPFLAQVFGIVPLSLNEWLLVLAVS 1027
Query: 1025 APVILIDEVLKFVGR 1039
PVILIDEVLKFVGR
Sbjct: 1028 LPVILIDEVLKFVGR 1042
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to an endomembrane compartment. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P92939|ECA1_ARATH Calcium-transporting ATPase 1, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1374 bits (3556), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/1036 (66%), Positives = 824/1036 (79%), Gaps = 19/1036 (1%)
Query: 6 FPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTL 65
FPAW+ V +C + + V +KGLSS EV KR + YG NEL+K +G +++L+LEQF+DTL
Sbjct: 24 FPAWAKDVAECEEHFVVSREKGLSSDEVLKRHQIYGLNELEKPEGTSIFKLILEQFNDTL 83
Query: 66 VKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEA 125
V+ILL AA ISF+LA+F + G+ G +VEPLVI LIL++NAIVG+WQE+NAEKALEA
Sbjct: 84 VRILLAAAVISFVLAFFDGDEGGEMGITAFVEPLVIFLILIVNAIVGIWQETNAEKALEA 143
Query: 126 LKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSS 185
LK+IQ + V+RDG V LPA LVPGDIVEL VGDKVPADMRV AL +S+LRVEQ S
Sbjct: 144 LKEIQSQQATVMRDGTKVSSLPAKELVPGDIVELRVGDKVPADMRVVALISSTLRVEQGS 203
Query: 186 LTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQI 245
LTGE+ + K T V ++ ++Q K+ MVFAGTTVVNG+C+C+V +TGMNTEIG++ QI
Sbjct: 204 LTGESEAVSKTTKHVD-ENADIQGKKCMVFAGTTVVNGNCICLVTDTGMNTEIGRVHSQI 262
Query: 246 HDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFE 305
+A+ E DTPL+KKL+EFG LT IGL+C +VW++N + FLSW+ VDGWP N +FSFE
Sbjct: 263 QEAAQHEEDTPLKKKLNEFGEVLTMIIGLICALVWLINVKYFLSWEYVDGWPRNFKFSFE 322
Query: 306 KCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICS 365
KCTYYF+IAVALAVAAIPEGLPAVITTCLALGTRKMAQKNA+VRKLPSVETLGCTTVICS
Sbjct: 323 KCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICS 382
Query: 366 DKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAK 425
DKTGTLTTNQM+V++ +G + R F+VEGT++DP+DG I DWP MDANLQ +AK
Sbjct: 383 DKTGTLTTNQMAVSKLVAMGSRIGTLRSFNVEGTSFDPRDGKIEDWPMGRMDANLQMIAK 442
Query: 426 ICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSS 485
I A+CNDA V F + G+PTEAALKVLVEKMGFP+ G N+ S D
Sbjct: 443 IAAICNDANVEQSDQQFVSRGMPTEAALKVLVEKMGFPE--GLNEASS---------DGD 491
Query: 486 TVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQL 545
+R CC W++ +R+ATLEFDR RKSM V+V +G+ LLVKG+VE++LERS+H+QL
Sbjct: 492 VLR--CCRLWSELEQRIATLEFDRDRKSMGVMVDSSSGNKLLLVKGAVENVLERSTHIQL 549
Query: 546 ADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYY-SESHPAHKKLLDP 604
DGS LD+ L+L +MS LRCLG AY D +F+ Y SE HPAH++LL+P
Sbjct: 550 LDGSKRELDQYSRDLILQSLRDMSLSALRCLGFAYSDVPSDFATYDGSEDHPAHQQLLNP 609
Query: 605 SCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKL 664
S YS+IES+L+FVG VGLRDPPR V +AI DCR AGI VMVITGDNKSTAEAICR+I +
Sbjct: 610 SNYSSIESNLIFVGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKSTAEAICREIGV 669
Query: 665 FSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVA 724
F +ED++ RS TG EFM + Q L + GG +FSRAEP+HKQEIVR+LKE GEVVA
Sbjct: 670 FEADEDISSRSLTGIEFMDVQ--DQKNHLRQTGGLLFSRAEPKHKQEIVRLLKEDGEVVA 727
Query: 725 MTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMK 784
MTGDGVNDAPALKLADIGVAMGI+GTEVAKEASDMVLADDNF +IV+AV EGRSIYNNMK
Sbjct: 728 MTGDGVNDAPALKLADIGVAMGISGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYNNMK 787
Query: 785 AFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQ 844
AFIRYMISSN+GEV SIFLTAALGIPE +IPVQLLWVNLVTDGPPATALGFNP D DIM+
Sbjct: 788 AFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMK 847
Query: 845 KPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQ 904
KPPR+ DD+LI +W+L RY+VIG YVG+ATVG+F++WYT SFMGI+L DGH+LV+ Q
Sbjct: 848 KPPRRSDDSLITAWILFRYMVIGLYVGVATVGVFIIWYTHSSFMGIDLSQDGHSLVSYSQ 907
Query: 905 LRNWGECSTWSNFTVAPYAVGGGQMITF-SNPCDYFTIGKVKAMTLSLSVLVAIEMFNSL 963
L +WG+CS+W F V+P+ G Q +F SNPCDYF GK+KA TLSLSVLVAIEMFNSL
Sbjct: 908 LAHWGQCSSWEGFKVSPF-TAGSQTFSFDSNPCDYFQQGKIKASTLSLSVLVAIEMFNSL 966
Query: 964 NALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLVILV 1023
NALSED SLVTMPPW NPWLL+AM+VS GLH +ILYVPFLA VFG+VPL+LNEW LV+ V
Sbjct: 967 NALSEDGSLVTMPPWVNPWLLLAMAVSFGLHFVILYVPFLAQVFGIVPLSLNEWLLVLAV 1026
Query: 1024 SAPVILIDEVLKFVGR 1039
S PVILIDEVLKFVGR
Sbjct: 1027 SLPVILIDEVLKFVGR 1042
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the endoplasmic reticulum lumen. Also regulate manganese ion homeostasis by pumping it into endomembrane compartments. Can also transport zinc. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q7PPA5|ATC1_ANOGA Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Anopheles gambiae GN=Ca-P60A PE=2 SV=5 | Back alignment and function description |
|---|
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/1049 (49%), Positives = 671/1049 (63%), Gaps = 85/1049 (8%)
Query: 10 SWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKIL 69
S TV++ L + V ++GLS +V++ +++YG NEL E+GK LWQLVLEQFDD LVKIL
Sbjct: 6 SKTVDEVLSHFRVDPERGLSLDQVKEYQKKYGPNELPAEEGKTLWQLVLEQFDDLLVKIL 65
Query: 70 LVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKI 129
L+AA ISF+LA F + G E +VEP VI+LIL+ NA+VGVWQE NAE A+EALK+
Sbjct: 66 LLAAIISFVLALFEEHE----GVEAFVEPFVILLILIANAVVGVWQERNAESAIEALKEY 121
Query: 130 QCESGKVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTG 188
+ E GKV+R D V + A +VPGD+VE+ VGDK+PAD+R+ + ++++R++QS LTG
Sbjct: 122 EPEMGKVIRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTG 181
Query: 189 EAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDA 248
E++ ++K T V Q K+N++F+GT V G +VI TG+NT IGKI+ ++ +
Sbjct: 182 ESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGVVIGTGLNTAIGKIRTEMSET 241
Query: 249 SLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCT 308
EE TPL++KLDEFG +L+ I L+C+ VW +N +F PA+ +
Sbjct: 242 --EEIKTPLQQKLDEFGEQLSKVISLICVAVWAINIGHFND-------PAHGGSWIKGAV 292
Query: 309 YYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKT 368
YYFKIAVALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VICSDKT
Sbjct: 293 YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKT 352
Query: 369 GTLTTNQMSVTEFFTL----GRKTTISRIFHVEGTTYDP-----KDGGIVDWPCYNMDAN 419
GTLTTNQMSV+ F G ++ + F + G+TY+P +G + Y
Sbjct: 353 GTLTTNQMSVSRMFIFEKIEGNDSSFTE-FEISGSTYEPIGEVTLNGQRIKAADYE---T 408
Query: 420 LQAMAKICAVCNDAGVYCD--GPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLA 477
L + IC +CND+ + + +F G TE AL VL EK+ +V
Sbjct: 409 LHELGTICIMCNDSAIDFNETKKVFEKVGEATETALIVLAEKLNPFNV------------ 456
Query: 478 ANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHN-----QLLVKGS 532
A +D + + + + K+ TLEF R RKSMS +L KG+
Sbjct: 457 AKQGLDRRSSAICVRQEIETKWKKEFTLEFSRDRKSMSSYCTPLKASKLGNGPKLFCKGA 516
Query: 533 VESLLERSSHVQLADGSVVPLDEPCWQ--LMLSRHLEMSSKGLRCLGMAYKDELGEFSDY 590
E +LER +H ++ + VPL + Q L L+R LRCL +A D
Sbjct: 517 PEGVLERCTHARVGS-TKVPLTQTLKQRILDLTRTYGTGRDTLRCLALATAD-------- 567
Query: 591 YSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGD 650
S P L D + + T E +L FVGVVG+ DPPR V +I CR AGI V+VITGD
Sbjct: 568 -SPMKPDDMDLNDSTKFYTYEVNLTFVGVVGMLDPPRKEVQDSIVRCRAAGIRVIVITGD 626
Query: 651 NKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQ 710
NK+TAEAICR+I +F +ED TG+S++G+EF LS ++Q EA S+ ++FSR EP HK
Sbjct: 627 NKATAEAICRRIGVFGEDEDTTGKSYSGREFDDLSVSEQREACSR--ARLFSRVEPAHKS 684
Query: 711 EIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIV 770
+IV L+ M E+ AMTGDGVNDAPALK A+IG+AMG +GT VAK A++MVLADDNF SIV
Sbjct: 685 KIVEFLQSMNEISAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKSAAEMVLADDNFSSIV 743
Query: 771 SAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPA 830
+AV EGR+IYNNMK FIRY+ISSN+GEV+SIFLTAALG+PE LIPVQLLWVNLVTDG PA
Sbjct: 744 AAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPA 803
Query: 831 TALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGI 890
TALGFNP D+DIM KPPRK D+ LI+ W+ RY+ IG YVG ATVG W+
Sbjct: 804 TALGFNPPDLDIMTKPPRKADEGLISGWLFFRYMAIGGYVGCATVGGAAWWFMFSE---- 859
Query: 891 NLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLS 950
T PQL W T +GGG+ + C F MT++
Sbjct: 860 ----------TGPQLSYW-------QLTHHLSCLGGGEEFKGID-CKIFN--DPHPMTMA 899
Query: 951 LSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVV 1010
LSVLV IEM N++N+LSE+ SLV MPPW N WL+ +M +S LH +ILYV L+ VF V
Sbjct: 900 LSVLVTIEMLNAMNSLSENQSLVQMPPWCNIWLIASMCLSFALHFVILYVDVLSTVFQVT 959
Query: 1011 PLNLNEWFLVILVSAPVILIDEVLKFVGR 1039
PL+ NEW V+ S PV+L+DE+LKFV R
Sbjct: 960 PLDGNEWMTVMKFSLPVVLLDEILKFVAR 988
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Anopheles gambiae (taxid: 7165) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9YGL9|AT2A3_CHICK Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Gallus gallus GN=ATP2A3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/1061 (48%), Positives = 673/1061 (63%), Gaps = 100/1061 (9%)
Query: 8 AWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVK 67
A S V+ L + V GLS +V + RE+YG NEL E+ K LW+LVLEQF+D LV+
Sbjct: 4 AHSVPVQDVLSRFGVAESCGLSPEQVRRNREKYGPNELPAEERKSLWELVLEQFEDLLVR 63
Query: 68 ILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALK 127
ILL+AAF+SFILA+F + + F VEP+VI++IL+ NA+VGVWQE NAE A+EALK
Sbjct: 64 ILLMAAFLSFILAWFEEGEESTTAF---VEPIVIIMILIANAVVGVWQERNAESAIEALK 120
Query: 128 KIQCESGKVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSL 186
+ + E GKV+R D V + A +VPGDIVE+ VGDKVPAD+R+ +++++LRV+QS L
Sbjct: 121 EYEPEMGKVIRADRSGVQRIRARDIVPGDIVEVAVGDKVPADIRIIEIRSTTLRVDQSIL 180
Query: 187 TGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIH 246
TGE+M ++K P+ Q K+NM+F+GT + G V IVI TG+ TEIGKI+ Q+
Sbjct: 181 TGESMSVIKHADPIPDPRAVNQDKKNMLFSGTNIAAGKAVGIVIATGVYTEIGKIRNQMV 240
Query: 247 DASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDG--WPANVQFSF 304
+ E TPL++KLDEF +L+ I LVC+ VW++N +F D V G W F
Sbjct: 241 ET--EPEKTPLQQKLDEFSQQLSKVIFLVCIAVWVINISHFS--DPVHGGSW-------F 289
Query: 305 EKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVIC 364
YYFK +VALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VIC
Sbjct: 290 RGAIYYFKTSVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVIC 349
Query: 365 SDKTGTLTTNQMSVTEFFTL----GRKTTISRIFHVEGTTYDPKDGGIVDWP---CYNMD 417
SDKTGTLTTNQMSV F + G + ++ F + G+TY P+ + D C D
Sbjct: 350 SDKTGTLTTNQMSVCRMFIMEKVEGTQCSLHE-FSITGSTYAPEGQILKDEKPVRCGQYD 408
Query: 418 ANLQAMAKICAVCNDAGV-YCDGP-LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQ 475
L +A ICA+CND+ + Y + ++ G TE AL LVEKM D +K+S +
Sbjct: 409 G-LVELATICALCNDSSLDYNESKKVYEKVGEATETALTCLVEKMNVFDTDT-SKLSKVE 466
Query: 476 LAANYLIDSSTVRLGCCEWWTKR-SKRVATLEFDRIRKSMSVIVREPTG--HN----QLL 528
R C K ++ TLEF R RKSMSV PTG HN ++
Sbjct: 467 ------------RANACNSVIKHLMRKECTLEFSRDRKSMSVYC-TPTGPGHNSAGSKMF 513
Query: 529 VKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLS--RHLEMSSKGLRCLGMAYKDELGE 586
VKG+ ES++ER +HV++ V PL P + +LS R M + LRCL +A D
Sbjct: 514 VKGAPESVIERCTHVRVGTAKV-PLTPPVREKILSQIRDWGMGTDTLRCLALATHD---- 568
Query: 587 FSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMV 646
+ E+ H D + ++ E++L FVG VG+ DPPR V +I+ CR AGI V++
Sbjct: 569 -APVQRETMQLH----DSTTFTHYETNLTFVGCVGMLDPPRKEVTSSIEMCRKAGIRVIM 623
Query: 647 ITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEP 706
ITGDNK TA AICR+I +F+ +ED+ G+++TG+EF LS Q +A + + F+R EP
Sbjct: 624 ITGDNKGTAVAICRRIGIFTESEDVAGKAYTGREFDELSPEAQRQACRE--ARCFARVEP 681
Query: 707 RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNF 766
HK IV L+ E+ AMTGDGVNDAPALK A+IG+AMG +GT VAK A++MVL+DDNF
Sbjct: 682 AHKSRIVEYLQSFNEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKSAAEMVLSDDNF 740
Query: 767 GSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTD 826
+IVSAV EGR+IYNNMK FIRY+ISSNVGEV+ IFLTA LG+PE LIPVQLLWVNLVTD
Sbjct: 741 STIVSAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAILGLPEALIPVQLLWVNLVTD 800
Query: 827 GPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGS 886
G PATALGFNP D+DIM K PR + LI+ W+ RYL IG YVG+ATVG W+
Sbjct: 801 GLPATALGFNPPDLDIMDKLPRNPKEPLISGWLFFRYLAIGVYVGLATVGAATWWF---- 856
Query: 887 FMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNP------CDYFT 940
L V+ QLRN+ C T NP C+ F
Sbjct: 857 -----LYDAEGPQVSFHQLRNFMRC-------------------TEDNPIFEGVNCEIFE 892
Query: 941 IGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYV 1000
T++LSVLV IEM N+LN++SE+ SL+ MPPW N WLL A+ +S+ LH ILYV
Sbjct: 893 --SRYPTTMALSVLVTIEMCNALNSVSENQSLLRMPPWLNIWLLGAIVMSMALHFFILYV 950
Query: 1001 PFLADVFGVVPLNLNEWFLVILVSAPVILIDEVLKFVGRNR 1041
+ +F V PL+ +W +V+ +S PVIL+DE LK++ RN
Sbjct: 951 KPMPLIFQVTPLSWPQWVVVLKISLPVILLDEGLKYLSRNH 991
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of the calcium. Transports calcium ions from the cytosol into the sarcoplasmic/endoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction. Gallus gallus (taxid: 9031) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q03669|AT2A2_CHICK Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Gallus gallus GN=ATP2A2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/1066 (49%), Positives = 687/1066 (64%), Gaps = 101/1066 (9%)
Query: 8 AWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVK 67
A + TVE+ L + V GLS +V+K +E++G NEL E+GK L +LV+EQF+D LV+
Sbjct: 4 AHTKTVEEVLAYFGVNESTGLSLEQVKKLKEKWGSNELPAEEGKTLLELVIEQFEDLLVR 63
Query: 68 ILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALK 127
ILL+AA ISF+LA+F + G+ +VEP VI+LILV NAIVGVWQE NAE A+EALK
Sbjct: 64 ILLLAACISFVLAWF---EEGEETITAFVEPFVILLILVANAIVGVWQERNAENAIEALK 120
Query: 128 KIQCESGKVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSL 186
+ + E GKV R D V + A +VPGDIVE+ VGDKVPAD+R+ ++K+++LRV+QS L
Sbjct: 121 EYEPEMGKVYRQDRKSVQRIKARDIVPGDIVEVAVGDKVPADIRITSIKSTTLRVDQSIL 180
Query: 187 TGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIH 246
TGE++ ++K T PV Q K+NM+F+GT + G + +VI TG+NTEIGKI+ ++
Sbjct: 181 TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAMGVVIATGVNTEIGKIRDEM- 239
Query: 247 DASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDG--WPANVQFSF 304
+ E+ TPL++KLDEFG +L+ I L+C+ VWI+N +F D V G W
Sbjct: 240 -VATEQERTPLQQKLDEFGEQLSKVISLICIAVWIINIGHF--NDPVHGGSW-------I 289
Query: 305 EKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVIC 364
YYFKIAVALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VIC
Sbjct: 290 RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVIC 349
Query: 365 SDKTGTLTTNQMSVTEFFTL----GRKTTISRIFHVEGTTYDP-----KDGGIVDWPCYN 415
SDKTGTLTTNQMSV F L G +++ F V G+TY P KD ++ Y+
Sbjct: 350 SDKTGTLTTNQMSVCRMFILDKVEGDSCSLNE-FTVTGSTYAPMGEVHKDDKLIKCSQYD 408
Query: 416 MDANLQAMAKICAVCNDAGV-YCDGP-LFRATGLPTEAALKVLVEKMGF--PDVKGRNKI 471
L +A ICA+CND+ + Y + ++ G TE AL LVEKM D+KG ++I
Sbjct: 409 ---GLVELATICALCNDSSLDYNEAKGVYEKVGEATETALTCLVEKMNVFDTDLKGLSRI 465
Query: 472 SDTQLAANYLIDSSTVRLGCCEWWTKR-SKRVATLEFDRIRKSMSVIV--REP--TGHNQ 526
R C K+ K+ TLEF R RKSMSV +P T ++
Sbjct: 466 E---------------RANACNSVIKQLMKKEFTLEFSRDRKSMSVYCTPNKPSRTSMSK 510
Query: 527 LLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLS--RHLEMSSKGLRCLGMAYKDEL 584
+ VKG+ E +++R +HV++ + + PL Q ++S R LRCL +A D
Sbjct: 511 MFVKGAPEGVIDRCTHVRVGNAKI-PLSSGIKQKIMSVIREWGTGRDTLRCLALATHD-- 567
Query: 585 GEFSDYYSESHPAHKK---LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAG 641
+P K+ L D S + E++L FVG VG+ DPPR V +I C+ AG
Sbjct: 568 ----------NPPRKEEMNLEDSSNFINYETNLTFVGCVGMLDPPRIEVASSIKLCKQAG 617
Query: 642 IEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701
I V++ITGDNK TA AICR+I +F +ED++ ++FTG+EF LS Q +A H + F
Sbjct: 618 IRVIMITGDNKGTAVAICRRIGIFVEDEDVSTKAFTGREFDELSLAAQRDAC--HHARCF 675
Query: 702 SRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVL 761
+R EP HK +IV L+ E+ AMTGDGVNDAPALK A+IG+AMG +GT VAK AS+MVL
Sbjct: 676 ARVEPSHKSKIVEFLQSFDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVL 734
Query: 762 ADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWV 821
ADDNF +IV+AV EGR+IYNNMK FIRY+ISSNVGEV+ IFLTAALG PE LIPVQLLWV
Sbjct: 735 ADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWV 794
Query: 822 NLVTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLW 881
NLVTDG PATALGFNP D+DIM KPPR + LI+ W+ RYL IG YVG ATVG W
Sbjct: 795 NLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWW 854
Query: 882 YTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWS-NFTVAPYAVGGGQMITFSNPCDYFT 940
+ + DG VT QL ++ +C + +F+ G + F +P
Sbjct: 855 F---------IAADGGPRVTFYQLSHFLQCKEDNPDFS-------GVDCVVFESP----- 893
Query: 941 IGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYV 1000
MT++LSVLV IEM N+LN+LSE+ SL+ MPPW N WL+ A+ +S+ LH LILYV
Sbjct: 894 ----YPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWENIWLVGAICLSMSLHFLILYV 949
Query: 1001 PFLADVFGVVPLNLNEWFLVILVSAPVILIDEVLKFVGRNRRLSGK 1046
L +F + PLN+ +W +V+ +S PVIL+DE LK+V RN GK
Sbjct: 950 EPLPIIFQITPLNVTQWLMVLKISLPVILLDETLKYVARNYLEPGK 995
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Isoform SERCA2A is involved in the regulation of the contraction/relaxation cycle. Gallus gallus (taxid: 9031) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P11607|AT2A2_PIG Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Sus scrofa GN=ATP2A2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/1065 (49%), Positives = 687/1065 (64%), Gaps = 97/1065 (9%)
Query: 8 AWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVK 67
A + TVE+ L + V GLS +V+K +ER+G NEL E+GK L +LV+EQF+D LV+
Sbjct: 4 AHTKTVEEVLGHFGVNESTGLSLEQVKKLKERWGSNELPAEEGKTLLELVIEQFEDLLVR 63
Query: 68 ILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALK 127
ILL+AA ISF+LA+F + G+ +VEP VI+LILV NAIVGVWQE NAE A+EALK
Sbjct: 64 ILLLAACISFVLAWF---EEGEETITAFVEPFVILLILVANAIVGVWQERNAENAIEALK 120
Query: 128 KIQCESGKVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSL 186
+ + E GKV R D V + A +VPGDIVE+ VGDKVPAD+R+ ++K+++LRV+QS L
Sbjct: 121 EYEPEMGKVYRQDRKSVQRIKAKDIVPGDIVEIAVGDKVPADIRLTSIKSTTLRVDQSIL 180
Query: 187 TGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIH 246
TGE++ ++K T PV Q K+NM+F+GT + G + +V+ TG+NTEIGKI+ ++
Sbjct: 181 TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAMGVVVATGVNTEIGKIRDEM- 239
Query: 247 DASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDG--WPANVQFSF 304
+ E+ TPL++KLDEFG +L+ I L+C+ VWI+N +F D V G W
Sbjct: 240 -VATEQERTPLQQKLDEFGEQLSKVISLICIAVWIINIGHF--NDPVHGGSW-------I 289
Query: 305 EKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVIC 364
YYFKIAVALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VIC
Sbjct: 290 RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVIC 349
Query: 365 SDKTGTLTTNQMSVTEFFTLGR---KTTISRIFHVEGTTYDP-----KDGGIVDWPCYNM 416
SDKTGTLTTNQMSV F L + T F + G+TY P KD V C+
Sbjct: 350 SDKTGTLTTNQMSVCRMFILDKVEGDTCSLNEFTITGSTYAPIGEVHKDDKPVK--CHQY 407
Query: 417 DANLQAMAKICAVCNDAGV-YCDGP-LFRATGLPTEAALKVLVEKMGFPD--VKGRNKIS 472
D L +A ICA+CND+ + Y + ++ G TE AL LVEKM D +KG +KI
Sbjct: 408 DG-LVELATICALCNDSALDYNEAKGVYEKVGEATETALTCLVEKMNVFDTELKGLSKIE 466
Query: 473 DTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIV--REP--TGHNQLL 528
A N +I + K+ TLEF R RKSMSV +P T +++
Sbjct: 467 RAN-ACNSVIK-------------QLMKKEFTLEFSRDRKSMSVYCTPNKPSRTSMSKMF 512
Query: 529 VKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLS--RHLEMSSKGLRCLGMAYKDELGE 586
VKG+ E +++R +H+++ + VP+ Q ++S R S LRCL +A D
Sbjct: 513 VKGAPEGVIDRCTHIRVG-STKVPMTPGVKQKIMSVIREWGSGSDTLRCLALATHD---- 567
Query: 587 FSDYYSESHPAHKK---LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIE 643
+P ++ L D + + E++L FVG VG+ DPPR V ++ CR AGI
Sbjct: 568 --------NPMRREEMNLEDSANFIKYETNLTFVGCVGMLDPPRIEVASSVKLCRQAGIR 619
Query: 644 VMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703
V++ITGDNK TA AICR+I +F +ED+T ++FTG+EF L+ + Q EA + F+R
Sbjct: 620 VIMITGDNKGTAVAICRRIGIFGQDEDVTSKAFTGREFDELNPSAQREAC--LNARCFAR 677
Query: 704 AEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLAD 763
EP HK +IV L+ E+ AMTGDGVNDAPALK ++IG+AMG +GT VAK AS+MVLAD
Sbjct: 678 VEPSHKSKIVEFLQSFDEITAMTGDGVNDAPALKKSEIGIAMG-SGTAVAKTASEMVLAD 736
Query: 764 DNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNL 823
DNF +IV+AV EGR+IYNNMK FIRY+ISSNVGEV+ IFLTAALG PE LIPVQLLWVNL
Sbjct: 737 DNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNL 796
Query: 824 VTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYT 883
VTDG PATALGFNP D+DIM KPPR + LI+ W+ RYL IG YVG ATVG W+
Sbjct: 797 VTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWWF- 855
Query: 884 KGSFMGINLVGDGHTLVTLPQLRNWGECSTWS-NFTVAPYAVGGGQMITFSNPCDYFTIG 942
+ DG VT QL ++ +C + +F AV F +P
Sbjct: 856 --------IAADGGPRVTFYQLSHFLQCKEDNPDFEGVDCAV-------FESP------- 893
Query: 943 KVKAMTLSLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPF 1002
MT++LSVLV IEM N+LN+LSE+ SL+ MPPW N WL+ ++ +S+ LH LILYV
Sbjct: 894 --YPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEP 951
Query: 1003 LADVFGVVPLNLNEWFLVILVSAPVILIDEVLKFVGRNRRLSGKK 1047
L +F + PLNL +W +V+ +S PVIL+DE LKFV RN GK+
Sbjct: 952 LPLIFQITPLNLTQWLMVLKISLPVILMDETLKFVARNYLEPGKE 996
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Isoform SERCA2A is involved in the regulation of the contraction/relaxation cycle. Sus scrofa (taxid: 9823) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P22700|ATC1_DROME Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Drosophila melanogaster GN=Ca-P60A PE=1 SV=2 | Back alignment and function description |
|---|
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/1051 (48%), Positives = 674/1051 (64%), Gaps = 86/1051 (8%)
Query: 10 SWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKIL 69
S TVEQ L + ++GL+ +++ +++YG NEL E+GK +WQLVLEQFDD LVKIL
Sbjct: 6 SKTVEQSLNFFGTDPERGLTLDQIKANQKKYGPNELPTEEGKSIWQLVLEQFDDLLVKIL 65
Query: 70 LVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKI 129
L+AA ISF+LA F + + F +VEPLVI+LIL+ NA+VGVWQE NAE A+EALK+
Sbjct: 66 LLAAIISFVLALF---EEHEETFTAFVEPLVILLILIANAVVGVWQERNAESAIEALKEY 122
Query: 130 QCESGKVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTG 188
+ E GKV+R D + + A +VPGD+VE+ VGDK+PAD+R+ + +++LR++QS LTG
Sbjct: 123 EPEMGKVVRQDKSGIQKVRAKEIVPGDLVEVSVGDKIPADIRITHIYSTTLRIDQSILTG 182
Query: 189 EAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDA 248
E++ ++K T + Q K+N++F+GT V G +VI TG++T IGKI+ ++ +
Sbjct: 183 ESVSVIKHTDAIPDPRAVNQDKKNILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEMSET 242
Query: 249 SLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCT 308
EE TPL++KLDEFG +L+ I ++C+ VW +N +F PA+ +
Sbjct: 243 --EEIKTPLQQKLDEFGEQLSKVISVICVAVWAINIGHFND-------PAHGGSWIKGAI 293
Query: 309 YYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKT 368
YYFKIAVALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VICSDKT
Sbjct: 294 YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKT 353
Query: 369 GTLTTNQMSVTEFFTL----GRKTTISRIFHVEGTTYDP-----KDGGIVDWPCYNMDAN 419
GTLTTNQMSV+ F G ++ F + G+TY+P +G + Y+
Sbjct: 354 GTLTTNQMSVSRMFIFDKVEGNDSSFLE-FEMTGSTYEPIGEVFLNGQRIKAADYD---T 409
Query: 420 LQAMAKICAVCNDAGVYCD--GPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLA 477
LQ ++ IC +CND+ + + F G TE AL VL EK+ V
Sbjct: 410 LQELSTICIMCNDSAIDYNEFKQAFEKVGEATETALIVLAEKLNSFSVNKSG-------- 461
Query: 478 ANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIV------REPTGHNQLLVKG 531
+D + + C + K+ TLEF R RKSMS R TG +L VKG
Sbjct: 462 ----LDRRSAAIACRGEIETKWKKEFTLEFSRDRKSMSSYCTPLKASRLGTGP-KLFVKG 516
Query: 532 SVESLLERSSHVQLADGSVVPLDEPCWQ--LMLSRHLEMSSKGLRCLGMAYKDELGEFSD 589
+ E +LER +H ++ + VPL L L+ LRCL +A D
Sbjct: 517 APEGVLERCTHARVGT-TKVPLTSALKAKILALTGQYGTGRDTLRCLALAVAD------- 568
Query: 590 YYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITG 649
S P L D + + E +L FVGVVG+ DPPR V +I CR AGI V+VITG
Sbjct: 569 --SPMKPDEMDLGDSTKFYQYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITG 626
Query: 650 DNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHK 709
DNK+TAEAICR+I +F+ +ED TG+S++G+EF LS T+Q A+++ ++FSR EP+HK
Sbjct: 627 DNKATAEAICRRIGVFAEDEDTTGKSYSGREFDDLSPTEQKAAVAR--SRLFSRVEPQHK 684
Query: 710 QEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSI 769
+IV L+ M E+ AMTGDGVNDAPALK A+IG+AMG +GT VAK A++MVLADDNF SI
Sbjct: 685 SKIVEFLQSMNEISAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKSAAEMVLADDNFSSI 743
Query: 770 VSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPP 829
VSAV EGR+IYNNMK FIRY+ISSN+GEV+SIFLTAALG+PE LIPVQLLWVNLVTDG P
Sbjct: 744 VSAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLP 803
Query: 830 ATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMG 889
ATALGFNP D+DIM+KPPRK D+ LI+ W+ RY+ IG YVG ATVG W+
Sbjct: 804 ATALGFNPPDLDIMEKPPRKADEGLISGWLFFRYMAIGFYVGAATVGAAAWWFV------ 857
Query: 890 INLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTL 949
+G P+L W T +GGG + C F+ AMT+
Sbjct: 858 --FSDEG------PKLSYW-------QLTHHLSCLGGGDEFKGVD-CKIFS--DPHAMTM 899
Query: 950 SLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGV 1009
+LSVLV IEM N++N+LSE+ SL+TMPPW N WL+ +M++S LH +ILYV L+ VF V
Sbjct: 900 ALSVLVTIEMLNAMNSLSENQSLITMPPWCNLWLIGSMALSFTLHFVILYVDVLSTVFQV 959
Query: 1010 VPLNLNEWFLVILVSAPVILIDEVLKFVGRN 1040
PL+ EW V+ S PV+L+DE LKFV R
Sbjct: 960 TPLSAEEWITVMKFSIPVVLLDETLKFVARK 990
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Drosophila melanogaster (taxid: 7227) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P16615|AT2A2_HUMAN Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Homo sapiens GN=ATP2A2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/1062 (49%), Positives = 686/1062 (64%), Gaps = 91/1062 (8%)
Query: 8 AWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVK 67
A + TVE+ L + V GLS +V+K +ER+G NEL E+GK L +LV+EQF+D LV+
Sbjct: 4 AHTKTVEEVLGHFGVNESTGLSLEQVKKLKERWGSNELPAEEGKTLLELVIEQFEDLLVR 63
Query: 68 ILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALK 127
ILL+AA ISF+LA+F + G+ +VEP VI+LILV NAIVGVWQE NAE A+EALK
Sbjct: 64 ILLLAACISFVLAWF---EEGEETITAFVEPFVILLILVANAIVGVWQERNAENAIEALK 120
Query: 128 KIQCESGKVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSL 186
+ + E GKV R D V + A +VPGDIVE+ VGDKVPAD+R+ ++K+++LRV+QS L
Sbjct: 121 EYEPEMGKVYRQDRKSVQRIKAKDIVPGDIVEIAVGDKVPADIRLTSIKSTTLRVDQSIL 180
Query: 187 TGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIH 246
TGE++ ++K T PV Q K+NM+F+GT + G + +V+ TG+NTEIGKI+ ++
Sbjct: 181 TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAMGVVVATGVNTEIGKIRDEM- 239
Query: 247 DASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDG--WPANVQFSF 304
+ E+ TPL++KLDEFG +L+ I L+C+ VWI+N +F D V G W
Sbjct: 240 -VATEQERTPLQQKLDEFGEQLSKVISLICIAVWIINIGHF--NDPVHGGSW-------I 289
Query: 305 EKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVIC 364
YYFKIAVALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VIC
Sbjct: 290 RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVIC 349
Query: 365 SDKTGTLTTNQMSVTEFFTLGR---KTTISRIFHVEGTTYDP-----KDGGIVDWPCYNM 416
SDKTGTLTTNQMSV F L R T F + G+TY P KD V+ C+
Sbjct: 350 SDKTGTLTTNQMSVCRMFILDRVEGDTCSLNEFTITGSTYAPIGEVHKDDKPVN--CHQY 407
Query: 417 DANLQAMAKICAVCNDAGV-YCDGP-LFRATGLPTEAALKVLVEKMGFPD--VKGRNKIS 472
D L +A ICA+CND+ + Y + ++ G TE AL LVEKM D +KG +KI
Sbjct: 408 DG-LVELATICALCNDSALDYNEAKGVYEKVGEATETALTCLVEKMNVFDTELKGLSKIE 466
Query: 473 DTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIV--REP--TGHNQLL 528
A N +I + K+ TLEF R RKSMSV +P T +++
Sbjct: 467 RAN-ACNSVIK-------------QLMKKEFTLEFSRDRKSMSVYCTPNKPSRTSMSKMF 512
Query: 529 VKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLS--RHLEMSSKGLRCLGMAYKDELGE 586
VKG+ E +++R +H+++ + VP+ Q ++S R S LRCL +A D
Sbjct: 513 VKGAPEGVIDRCTHIRVG-STKVPMTSGVKQKIMSVIREWGSGSDTLRCLALATHDNPLR 571
Query: 587 FSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMV 646
+ + E D + + E++L FVG VG+ DPPR V ++ CR AGI V++
Sbjct: 572 REEMHLE---------DSANFIKYETNLTFVGCVGMLDPPRIEVASSVKLCRQAGIRVIM 622
Query: 647 ITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEP 706
ITGDNK TA AICR+I +F +ED+T ++FTG+EF L+ + Q +A + F+R EP
Sbjct: 623 ITGDNKGTAVAICRRIGIFGQDEDVTSKAFTGREFDELNPSAQRDAC--LNARCFARVEP 680
Query: 707 RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNF 766
HK +IV L+ E+ AMTGDGVNDAPALK A+IG+AMG +GT VAK AS+MVLADDNF
Sbjct: 681 SHKSKIVEFLQSFDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNF 739
Query: 767 GSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTD 826
+IV+AV EGR+IYNNMK FIRY+ISSNVGEV+ IFLTAALG PE LIPVQLLWVNLVTD
Sbjct: 740 STIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTD 799
Query: 827 GPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGS 886
G PATALGFNP D+DIM KPPR + LI+ W+ RYL IG YVG ATVG W+
Sbjct: 800 GLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWWF---- 855
Query: 887 FMGINLVGDGHTLVTLPQLRNWGECSTWS-NFTVAPYAVGGGQMITFSNPCDYFTIGKVK 945
+ DG V+ QL ++ +C + +F A+ F +P
Sbjct: 856 -----IAADGGPRVSFYQLSHFLQCKEDNPDFEGVDCAI-------FESP---------Y 894
Query: 946 AMTLSLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLAD 1005
MT++LSVLV IEM N+LN+LSE+ SL+ MPPW N WL+ ++ +S+ LH LILYV L
Sbjct: 895 PMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPL 954
Query: 1006 VFGVVPLNLNEWFLVILVSAPVILIDEVLKFVGRNRRLSGKK 1047
+F + PLN+ +W +V+ +S PVIL+DE LKFV RN GK+
Sbjct: 955 IFQITPLNVTQWLMVLKISLPVILMDETLKFVARNYLEPGKE 996
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Isoform 2 is involved in the regulation of the contraction/relaxation cycle. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1051 | ||||||
| 359489590 | 1051 | PREDICTED: calcium-transporting ATPase, | 0.987 | 0.987 | 0.872 | 0.0 | |
| 147767786 | 1051 | hypothetical protein VITISV_022077 [Viti | 0.987 | 0.987 | 0.871 | 0.0 | |
| 224127987 | 1045 | endoplasmic reticulum [ER]-type calcium | 0.994 | 1.0 | 0.867 | 0.0 | |
| 356520254 | 1057 | PREDICTED: calcium-transporting ATPase, | 1.0 | 0.994 | 0.830 | 0.0 | |
| 356559943 | 1057 | PREDICTED: calcium-transporting ATPase, | 1.0 | 0.994 | 0.835 | 0.0 | |
| 17342714 | 1047 | type IIA calcium ATPase [Medicago trunca | 0.995 | 0.999 | 0.820 | 0.0 | |
| 350538145 | 1048 | calcium-transporting ATPase, endoplasmic | 0.995 | 0.998 | 0.818 | 0.0 | |
| 15236991 | 1054 | Ca2+-transporting ATPase [Arabidopsis th | 0.993 | 0.990 | 0.783 | 0.0 | |
| 297810071 | 1056 | calcium-transporting ATPase 2, endoplasm | 0.993 | 0.988 | 0.780 | 0.0 | |
| 302785838 | 1042 | hypothetical protein SELMODRAFT_102055 [ | 0.976 | 0.984 | 0.714 | 0.0 |
| >gi|359489590|ref|XP_002264585.2| PREDICTED: calcium-transporting ATPase, endoplasmic reticulum-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1872 bits (4850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 906/1038 (87%), Positives = 976/1038 (94%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
MEE PFPAWSW+VEQCLKEYNV++DKGLSS EVEKRRERYGWNEL KEKGKPLW+LVLEQ
Sbjct: 1 MEENPFPAWSWSVEQCLKEYNVRIDKGLSSYEVEKRRERYGWNELTKEKGKPLWRLVLEQ 60
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
FDD LVKILLVAAFISFILAY H + + GFE YVEP VIVLILVLNAIVGV QE+NAE
Sbjct: 61 FDDMLVKILLVAAFISFILAYLHGDECEELGFEAYVEPFVIVLILVLNAIVGVIQETNAE 120
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
KALEALK++QCESGKVLRDGY VPDLPA LVPGDIVEL VGDKVPADMRVAALKTS+LR
Sbjct: 121 KALEALKEMQCESGKVLRDGYFVPDLPARELVPGDIVELRVGDKVPADMRVAALKTSTLR 180
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
VEQSSLTGEAMP+LKGTSP+F+DDCELQAKENMVFAGTTVVNGSC+CIV+NTGMNTEIGK
Sbjct: 181 VEQSSLTGEAMPVLKGTSPIFMDDCELQAKENMVFAGTTVVNGSCICIVVNTGMNTEIGK 240
Query: 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANV 300
IQ QIH+ASLEES+TPL+KKLDEFGNRLTT IGLVCL+VW++NY+ FL+WD+V+GWP N
Sbjct: 241 IQTQIHEASLEESNTPLKKKLDEFGNRLTTVIGLVCLIVWVINYKYFLTWDLVNGWPTNF 300
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
+FSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT
Sbjct: 301 RFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMS TEFFTLG K T SRIFHVEG+TYDPKDGGIVDW CYNMDANL
Sbjct: 361 TVICSDKTGTLTTNQMSATEFFTLGGKITSSRIFHVEGSTYDPKDGGIVDWNCYNMDANL 420
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
QAMA+ICAVCNDAG++C+G LFRATGLPTEAALKVLVEKMG PDVK RNKI DTQLAA+Y
Sbjct: 421 QAMAEICAVCNDAGIFCNGRLFRATGLPTEAALKVLVEKMGVPDVKARNKIRDTQLAASY 480
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
LID STV+LGCCEWWTKRSKRVATLEFDRIRKSMSV+VREPTG N+LLVKG+VESLLERS
Sbjct: 481 LIDRSTVKLGCCEWWTKRSKRVATLEFDRIRKSMSVLVREPTGRNRLLVKGAVESLLERS 540
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
SHVQLADGS+VPLDEP QL+L R+LEMSSKGLRCLG+AYKD+LGEFSDYY+E+HPAHKK
Sbjct: 541 SHVQLADGSLVPLDEPYRQLLLLRNLEMSSKGLRCLGLAYKDDLGEFSDYYTETHPAHKK 600
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDP+CYS+IES+LVFVGVVGLRDPPR V KAIDDCR AGI+VMVITGDNKSTAEAIC+
Sbjct: 601 LLDPACYSSIESELVFVGVVGLRDPPRDEVHKAIDDCREAGIKVMVITGDNKSTAEAICQ 660
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+I+LFS E L G SFTGKEFMALS ++QIE LSK GGKVFSRAEPRHKQEIVRMLKEMG
Sbjct: 661 EIRLFSEGEQLKGASFTGKEFMALSPSEQIEILSKPGGKVFSRAEPRHKQEIVRMLKEMG 720
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIY 780
E+VAMTGDGVNDAPALKLADIG+AMGITGTEVAKEASDMVLADDNF +IVSAVAEGRSIY
Sbjct: 721 EIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIY 780
Query: 781 NNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADV 840
NNMKAFIRYMISSNVGEVISIFLTAAL IPEC+IPVQLLWVNLVTDGPPATALGFNPADV
Sbjct: 781 NNMKAFIRYMISSNVGEVISIFLTAALSIPECMIPVQLLWVNLVTDGPPATALGFNPADV 840
Query: 841 DIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLV 900
DIM+KPPRK DDALINSWVL RYLVIGSYVGIATVGIF+LWYT+ SF+GINLV DGHTLV
Sbjct: 841 DIMRKPPRKSDDALINSWVLFRYLVIGSYVGIATVGIFILWYTQASFLGINLVSDGHTLV 900
Query: 901 TLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMF 960
L QLRNWGECS+WSNFTV P+ VG G++ITFSNPCDYF++GKVKA+TLSLSVLVAIEMF
Sbjct: 901 ELSQLRNWGECSSWSNFTVTPFTVGDGRVITFSNPCDYFSVGKVKAVTLSLSVLVAIEMF 960
Query: 961 NSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLV 1020
NSLNALSEDNSLVTMPPWRNPWLLVAMS S G+HCLILYVPFLADVFG+VPL+LNEWFLV
Sbjct: 961 NSLNALSEDNSLVTMPPWRNPWLLVAMSFSFGMHCLILYVPFLADVFGIVPLSLNEWFLV 1020
Query: 1021 ILVSAPVILIDEVLKFVG 1038
ILVSAPVILIDEVLK VG
Sbjct: 1021 ILVSAPVILIDEVLKLVG 1038
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147767786|emb|CAN66975.1| hypothetical protein VITISV_022077 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1870 bits (4845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 905/1038 (87%), Positives = 975/1038 (93%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
MEE PFPAWSW+VEQCLKEYNV++DKGLSS EVEKRRERYGWNEL KEKGKPLW+LVLEQ
Sbjct: 1 MEENPFPAWSWSVEQCLKEYNVRIDKGLSSYEVEKRRERYGWNELTKEKGKPLWRLVLEQ 60
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
FDD LVKILLVAAFISFILAY H + + GFE YVEP VIVLILVLNAIVGV QE+NAE
Sbjct: 61 FDDMLVKILLVAAFISFILAYLHGDECEELGFEAYVEPFVIVLILVLNAIVGVIQETNAE 120
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
KALEALK++QCESGKVLRDGY VPDLPA LVPGDIVEL VGDKVPADMRVAALKTS+LR
Sbjct: 121 KALEALKEMQCESGKVLRDGYFVPDLPARELVPGDIVELRVGDKVPADMRVAALKTSTLR 180
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
VEQSSLTGEAMP+LKGTSP+F+DDCELQAKENMVFAGTTVVNGSC+CIV+NTGMNTEIGK
Sbjct: 181 VEQSSLTGEAMPVLKGTSPIFMDDCELQAKENMVFAGTTVVNGSCICIVVNTGMNTEIGK 240
Query: 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANV 300
IQ QIH+ASLEES+TPL+KKLDEFGNRLTT IGLVCL+VW++NY+ FL+WD+V+GWP N
Sbjct: 241 IQTQIHEASLEESNTPLKKKLDEFGNRLTTVIGLVCLIVWVINYKYFLTWDLVNGWPTNF 300
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
+FSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT
Sbjct: 301 RFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMS TEFFTLG K T SRIFHVEG+TYDPKDGGIVDW CYNMDANL
Sbjct: 361 TVICSDKTGTLTTNQMSATEFFTLGGKITSSRIFHVEGSTYDPKDGGIVDWNCYNMDANL 420
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
QAMA+ICAVCNDAG++C+G LFRATGLPTEAALKVLVEKMG PDVK RNKI DTQLAA+Y
Sbjct: 421 QAMAEICAVCNDAGIFCNGRLFRATGLPTEAALKVLVEKMGVPDVKARNKIRDTQLAASY 480
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
LID STV+LGCCEWWTKRSKRVATLEFDRIRKSMSV+VREPTG N+LLVKG+VESLLERS
Sbjct: 481 LIDRSTVKLGCCEWWTKRSKRVATLEFDRIRKSMSVLVREPTGRNRLLVKGAVESLLERS 540
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
SHVQLADGS+VPLDEP QL+L R+LEMSSKGLRCLG+AYKD+LGEFSDYY+E+HPAHKK
Sbjct: 541 SHVQLADGSLVPLDEPYRQLLLLRNLEMSSKGLRCLGLAYKDDLGEFSDYYTETHPAHKK 600
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDP+CYS+IES+LVFVGVVGLRDPPR V KAIDDCR AGI+VMVITGDNKSTAEAIC+
Sbjct: 601 LLDPACYSSIESELVFVGVVGLRDPPRDEVHKAIDDCREAGIKVMVITGDNKSTAEAICQ 660
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+I+LFS E L G SFTGKEFMALS ++QIE LSK GGKVFSRAEPRHKQEIVRMLKEMG
Sbjct: 661 EIRLFSEGEQLKGASFTGKEFMALSPSEQIEILSKPGGKVFSRAEPRHKQEIVRMLKEMG 720
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIY 780
E+VAMTGDGVNDAPALKLADIG+AMGITGTEVAKEASDMVLADDNF +IVSAVAEGRSIY
Sbjct: 721 EIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIY 780
Query: 781 NNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADV 840
NNMKAFIRYMISSNVGEVISIFLTAAL IPEC+IPVQLLWVNLVTDGPPATALGFNPADV
Sbjct: 781 NNMKAFIRYMISSNVGEVISIFLTAALSIPECMIPVQLLWVNLVTDGPPATALGFNPADV 840
Query: 841 DIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLV 900
DIM+KPPRK DDALINSWVL RYLVIGSYVGIATVG F+LWYT+ SF+GINLV DGHTLV
Sbjct: 841 DIMRKPPRKSDDALINSWVLFRYLVIGSYVGIATVGXFILWYTQASFLGINLVSDGHTLV 900
Query: 901 TLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMF 960
L QLRNWGECS+WSNFTV P+ VG G++ITFSNPCDYF++GKVKA+TLSLSVLVAIEMF
Sbjct: 901 ELSQLRNWGECSSWSNFTVTPFTVGDGRVITFSNPCDYFSVGKVKAVTLSLSVLVAIEMF 960
Query: 961 NSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLV 1020
NSLNALSEDNSLVTMPPWRNPWLLVAMS S G+HCLILYVPFLADVFG+VPL+LNEWFLV
Sbjct: 961 NSLNALSEDNSLVTMPPWRNPWLLVAMSFSFGMHCLILYVPFLADVFGIVPLSLNEWFLV 1020
Query: 1021 ILVSAPVILIDEVLKFVG 1038
ILVSAPVILIDEVLK VG
Sbjct: 1021 ILVSAPVILIDEVLKLVG 1038
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127987|ref|XP_002320213.1| endoplasmic reticulum [ER]-type calcium ATPase [Populus trichocarpa] gi|222860986|gb|EEE98528.1| endoplasmic reticulum [ER]-type calcium ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1865 bits (4831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 912/1051 (86%), Positives = 973/1051 (92%), Gaps = 6/1051 (0%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
MEEKPFPAWSW+VEQCLKE+NVKLDKGLSS EVEKRRERYGWNEL KEKGKPLW LVLEQ
Sbjct: 1 MEEKPFPAWSWSVEQCLKEFNVKLDKGLSSYEVEKRRERYGWNELAKEKGKPLWWLVLEQ 60
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
FDD LVKILLVAAFISFILAY H+ +SG++GFE YVEPLVIVLIL LNAIVGVWQE+NAE
Sbjct: 61 FDDMLVKILLVAAFISFILAYLHAGESGEAGFEAYVEPLVIVLILALNAIVGVWQETNAE 120
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
KALEALK++QCESGKVLRDGY++P+LPA LVPGDIVEL VGDKVPADMRVA LKTS+LR
Sbjct: 121 KALEALKEMQCESGKVLRDGYMMPELPARELVPGDIVELRVGDKVPADMRVAVLKTSTLR 180
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
VEQSSLTGEAMP+LKGT+P+F+DDCELQAKENMVFAGTTVVNGSC+CIVI+TGM TEIGK
Sbjct: 181 VEQSSLTGEAMPVLKGTAPIFMDDCELQAKENMVFAGTTVVNGSCICIVISTGMKTEIGK 240
Query: 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANV 300
IQKQIH+ASLEESDTPL+KKLDEFG RLTTAIG CLVVWI+NY+NFLSWDVVDGWP N+
Sbjct: 241 IQKQIHEASLEESDTPLKKKLDEFGGRLTTAIGFACLVVWIINYKNFLSWDVVDGWPTNI 300
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
+FSFEKCTYYFKIAVALAVAAIPEGLPAVITT LALGTRKMAQKNAIVRKLPSVETLGCT
Sbjct: 301 RFSFEKCTYYFKIAVALAVAAIPEGLPAVITTSLALGTRKMAQKNAIVRKLPSVETLGCT 360
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMSVTEFFTLG KTT SRIF VEGTTYDPKDGGIVDW CYNMDANL
Sbjct: 361 TVICSDKTGTLTTNQMSVTEFFTLGGKTTSSRIFRVEGTTYDPKDGGIVDWTCYNMDANL 420
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
QAMA+ICAVCNDAG++CDG LFRATGLPTEAALKVLVEKMG PD K R KI D QLAANY
Sbjct: 421 QAMAEICAVCNDAGIFCDGRLFRATGLPTEAALKVLVEKMGVPDAKAREKIRDMQLAANY 480
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
LID S CEWWTKR KR+ATLEFDRIRKSMS+IVREP G N+LLVKG+VESLLERS
Sbjct: 481 LIDRS------CEWWTKRLKRLATLEFDRIRKSMSIIVREPNGQNRLLVKGAVESLLERS 534
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
SHVQLADGSVVP+DEPC QL+ R LEMSSKGLRCLG+AYKD+LGEFSDY++E+HPAHKK
Sbjct: 535 SHVQLADGSVVPIDEPCRQLLSLRLLEMSSKGLRCLGLAYKDDLGEFSDYHAENHPAHKK 594
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDP+ Y +IESDLVFVGVVGLRDPPR V KAI+DCR AGI VMVITGDNKSTAEAIC+
Sbjct: 595 LLDPAYYMSIESDLVFVGVVGLRDPPREEVHKAIEDCRDAGIRVMVITGDNKSTAEAICK 654
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+IKLF E L GRSFTGKEF ALS ++Q+E LSK GGKVFSRAEPRHKQEIVRMLK+MG
Sbjct: 655 EIKLFDEGEGLRGRSFTGKEFTALSPSEQMEILSKPGGKVFSRAEPRHKQEIVRMLKDMG 714
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIY 780
E+VAMTGDGVNDAPALKLADIG+AMGITGTEVAKEASDMVLADDNF SIVSAVAEGRSIY
Sbjct: 715 EIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSSIVSAVAEGRSIY 774
Query: 781 NNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADV 840
NNMKAFIRYMISSNVGEVISIFLTAALGIPEC+IPVQLLWVNLVTDGPPATALGFNPADV
Sbjct: 775 NNMKAFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADV 834
Query: 841 DIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLV 900
DIM+KPPRK +DALINSWVL RYLVIGSYVGIATVGIFVLWYT+ SF+GINLV DGHTLV
Sbjct: 835 DIMRKPPRKCNDALINSWVLFRYLVIGSYVGIATVGIFVLWYTQASFLGINLVSDGHTLV 894
Query: 901 TLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMF 960
L QLRNWGEC TWSNFTV PY VGGG+MITFSNPCDYF+ GKVKAMTLSLSVLVAIEMF
Sbjct: 895 QLSQLRNWGECPTWSNFTVTPYQVGGGRMITFSNPCDYFSAGKVKAMTLSLSVLVAIEMF 954
Query: 961 NSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLV 1020
NSLNALSEDNSLVTMPPWRNPWLLVAMSVS GLHC+ILYVPFLADVFG+VPL+L EWFLV
Sbjct: 955 NSLNALSEDNSLVTMPPWRNPWLLVAMSVSFGLHCVILYVPFLADVFGIVPLSLKEWFLV 1014
Query: 1021 ILVSAPVILIDEVLKFVGRNRRLSGKKEKTA 1051
ILVSAPVILIDE LKFVGR+ R KKEK A
Sbjct: 1015 ILVSAPVILIDEALKFVGRSGRCRAKKEKIA 1045
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|356520254|ref|XP_003528778.1| PREDICTED: calcium-transporting ATPase, endoplasmic reticulum-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1836 bits (4756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 874/1053 (83%), Positives = 973/1053 (92%), Gaps = 2/1053 (0%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
MEEKPFPAWSW++EQCLKEY VKLDKGLS+ EV+KR E+YG NEL KEKGKPLW+LVLEQ
Sbjct: 5 MEEKPFPAWSWSIEQCLKEYGVKLDKGLSTYEVQKRHEKYGMNELAKEKGKPLWELVLEQ 64
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
FDD LVKILL AAFISF+LAYFH SDSG+SGFE YVEPLVI+LILVLNAIVGVWQE+NAE
Sbjct: 65 FDDMLVKILLAAAFISFLLAYFHGSDSGESGFEAYVEPLVIILILVLNAIVGVWQENNAE 124
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
KALEALK++Q ESGKVLRDGY VPDLPA LVPGDIVEL VGDKVPADMRVAALKTS+LR
Sbjct: 125 KALEALKELQSESGKVLRDGYFVPDLPAKELVPGDIVELHVGDKVPADMRVAALKTSTLR 184
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
VEQSSLTGEAMP+LKGT+PVFLDDCELQAKENMVFAGTTVVNGSCVCIVI TGM+TEIGK
Sbjct: 185 VEQSSLTGEAMPVLKGTNPVFLDDCELQAKENMVFAGTTVVNGSCVCIVITTGMDTEIGK 244
Query: 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANV 300
I KQIH+AS EESDTPLRKKLDEFGNRLTTAIGLVCL+VW++NY+NF+SW+VVDGWP+N+
Sbjct: 245 IHKQIHEASQEESDTPLRKKLDEFGNRLTTAIGLVCLIVWVINYKNFISWEVVDGWPSNI 304
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
FSF+KCTYYFKIAV+LAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT
Sbjct: 305 NFSFQKCTYYFKIAVSLAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 364
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQM+VTEFFTLG KTT SR+ VEGTTYDPKDGGI+DW CYNMDANL
Sbjct: 365 TVICSDKTGTLTTNQMAVTEFFTLGGKTTASRLISVEGTTYDPKDGGILDWGCYNMDANL 424
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKI-SDTQLAAN 479
Q MA+ICAVCNDAG+Y DG LFRATGLPTEAALKVLVEKMG PD K RNKI ++T+LAAN
Sbjct: 425 QVMAEICAVCNDAGIYFDGRLFRATGLPTEAALKVLVEKMGVPDAKARNKIRNNTELAAN 484
Query: 480 YLIDSST-VRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLE 538
+++ +T V+LGCCEWW KRSK+VATLEFDRIRKSMSVIVREP G N+LLVKG+VESLLE
Sbjct: 485 NMMNGNTMVKLGCCEWWNKRSKKVATLEFDRIRKSMSVIVREPNGQNRLLVKGAVESLLE 544
Query: 539 RSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAH 598
RSSHVQLADGS+VP+D+ C +L+L R EMSSKGLRCLG AY DELGEFSDYY+++HPAH
Sbjct: 545 RSSHVQLADGSLVPIDDQCRELLLRRLQEMSSKGLRCLGFAYNDELGEFSDYYADTHPAH 604
Query: 599 KKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAI 658
KKLLDP+ YS+IESDLVFVG+VGLRDPPR V KAI+DC+ AGI VMVITGDNKSTAEAI
Sbjct: 605 KKLLDPTYYSSIESDLVFVGIVGLRDPPREEVHKAIEDCKEAGIRVMVITGDNKSTAEAI 664
Query: 659 CRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKE 718
CR+IKLFS +EDLTG+S GKEF++LS ++Q++ L + GGKVFSRAEPRHKQEIVR+LKE
Sbjct: 665 CREIKLFSKDEDLTGQSLAGKEFISLSHSEQVKILLRPGGKVFSRAEPRHKQEIVRLLKE 724
Query: 719 MGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRS 778
MGE+VAMTGDGVNDAPALKLADIG+AMGITGTEVAKEASDMVLADDNF +IV AVAEGRS
Sbjct: 725 MGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVLAVAEGRS 784
Query: 779 IYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPA 838
IYNNMK+FIRYMISSN+GEVISIFLTAALGIPEC+I VQLLWVNLVTDGPPATALGFNPA
Sbjct: 785 IYNNMKSFIRYMISSNIGEVISIFLTAALGIPECMISVQLLWVNLVTDGPPATALGFNPA 844
Query: 839 DVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHT 898
DVDIMQKPPR+ DD LI+SWVL RYLVIGSYVG+ATVGIFVLWYT+ SF+GINLV DGHT
Sbjct: 845 DVDIMQKPPRRSDDPLISSWVLFRYLVIGSYVGLATVGIFVLWYTQASFLGINLVSDGHT 904
Query: 899 LVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIE 958
++ L QLRNWGEC +WSNFTVAP+ V GG++ITFSNPCDYF++GK+KAMTLSLSVLVAIE
Sbjct: 905 IIELSQLRNWGECPSWSNFTVAPFEVAGGRLITFSNPCDYFSVGKLKAMTLSLSVLVAIE 964
Query: 959 MFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWF 1018
MFNSLNALSE+NSL +PPWRNPWLLVAMS+S GLHCLILY PFLA+VFGV+PL+LNEWF
Sbjct: 965 MFNSLNALSEENSLRKLPPWRNPWLLVAMSISFGLHCLILYTPFLAEVFGVIPLSLNEWF 1024
Query: 1019 LVILVSAPVILIDEVLKFVGRNRRLSGKKEKTA 1051
+V+L+SAPVILIDE+LK V R++R KEK A
Sbjct: 1025 MVLLISAPVILIDEILKLVVRSQRRLLTKEKEA 1057
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356559943|ref|XP_003548255.1| PREDICTED: calcium-transporting ATPase, endoplasmic reticulum-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1824 bits (4724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 880/1053 (83%), Positives = 974/1053 (92%), Gaps = 2/1053 (0%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
MEEKPFPAWSW+VEQCLKEY VKLDKGLS+ EV+KR E+YGWNEL KEKGKPLW+LVLEQ
Sbjct: 5 MEEKPFPAWSWSVEQCLKEYGVKLDKGLSTYEVQKRLEKYGWNELAKEKGKPLWELVLEQ 64
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
FDD LVKILL AAFISF+LAYFH SDS +SGFE YVEPLVI+LILVLNAIVGVWQE+NAE
Sbjct: 65 FDDMLVKILLAAAFISFLLAYFHGSDSEESGFEAYVEPLVIILILVLNAIVGVWQENNAE 124
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
KALEALK++QCESGKVLRDGY VPDLPA LVPGDIVEL VGDK PADMRVAALKTS LR
Sbjct: 125 KALEALKELQCESGKVLRDGYFVPDLPARELVPGDIVELHVGDKAPADMRVAALKTSILR 184
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
VEQSSLTGEAMP+LKGT+PVFLDDCELQAKENMVFAGTTVVNGSCVCIVI TGM+TEIGK
Sbjct: 185 VEQSSLTGEAMPVLKGTNPVFLDDCELQAKENMVFAGTTVVNGSCVCIVITTGMDTEIGK 244
Query: 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANV 300
IQKQIH+AS EESDTPL+KKLDEFGNRLTTAIGLVCL+VW++NY+NF+SWDVVDGWP+N+
Sbjct: 245 IQKQIHEASQEESDTPLKKKLDEFGNRLTTAIGLVCLIVWVINYKNFISWDVVDGWPSNI 304
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
+FSF+KCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT
Sbjct: 305 KFSFQKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 364
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQM+VTEFFTLG KTT SR+ VEGTTYDPKDGGIVDW CYNMD NL
Sbjct: 365 TVICSDKTGTLTTNQMAVTEFFTLGGKTTASRLIGVEGTTYDPKDGGIVDWGCYNMDVNL 424
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISD-TQLAAN 479
Q MA+ICAVCNDAG+Y DG LFRATGLPTEAALKVLVEKMG PD K RNKI D T+LAAN
Sbjct: 425 QVMAEICAVCNDAGIYFDGRLFRATGLPTEAALKVLVEKMGVPDAKSRNKIRDNTELAAN 484
Query: 480 YLIDSSTV-RLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLE 538
+++ +TV +LGCCEWW KRSK+VATLEFDRIRKSMSVIVREP G N+LLVKG+VESLLE
Sbjct: 485 NMMNGNTVVKLGCCEWWNKRSKKVATLEFDRIRKSMSVIVREPNGQNRLLVKGAVESLLE 544
Query: 539 RSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAH 598
RSSHVQLADGSVVP+D+ C +L+L R EMSSKGLRCLG AY D+LGEFSDYY+++HPAH
Sbjct: 545 RSSHVQLADGSVVPIDDQCRELLLQRLQEMSSKGLRCLGFAYNDDLGEFSDYYADTHPAH 604
Query: 599 KKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAI 658
KKLLDP+ YS+IESDLVFVG++GLRDPPR V KAI+DC+ AGI VMVITGDNKSTAEAI
Sbjct: 605 KKLLDPTHYSSIESDLVFVGIIGLRDPPREEVHKAIEDCKEAGIRVMVITGDNKSTAEAI 664
Query: 659 CRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKE 718
CR+IKLFS +EDLTG+S TGKEF++ S ++Q++ L + GGKVFSRAEPRHKQEIVR+LKE
Sbjct: 665 CREIKLFSKDEDLTGQSLTGKEFISFSPSEQVKILLRPGGKVFSRAEPRHKQEIVRLLKE 724
Query: 719 MGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRS 778
MGE+VAMTGDGVNDAPALKLADIG+AMGITGTEVAKEASDMVLADDNF +IVSAVAEGRS
Sbjct: 725 MGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRS 784
Query: 779 IYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPA 838
IYNNMK+FIRYMISSNVGEVISIFLTAALGIPEC+IPVQLLWVNLVTDGPPATALGFNPA
Sbjct: 785 IYNNMKSFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPA 844
Query: 839 DVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHT 898
D+DIMQKPPR+ DD LI+SWVL RYLVIGSYVG+ATVGIFVLWYT+ SF+GINLV DGHT
Sbjct: 845 DIDIMQKPPRRNDDPLISSWVLFRYLVIGSYVGLATVGIFVLWYTQASFLGINLVSDGHT 904
Query: 899 LVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIE 958
++ L QLRNWGEC +WSNFT+AP+ V GG++ITFSNPCDYF++GKVKAMTLSLSVLVAIE
Sbjct: 905 IIELSQLRNWGECPSWSNFTIAPFEVAGGRLITFSNPCDYFSVGKVKAMTLSLSVLVAIE 964
Query: 959 MFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWF 1018
MFNSLNALSE+NSL +PPWRNPWLLVAMS+SLGLHCLILY PFLA+VFGV+PL+LNEWF
Sbjct: 965 MFNSLNALSEENSLRKLPPWRNPWLLVAMSISLGLHCLILYTPFLAEVFGVIPLSLNEWF 1024
Query: 1019 LVILVSAPVILIDEVLKFVGRNRRLSGKKEKTA 1051
+V+L+SAPVILIDE+LK V R+ R KEK A
Sbjct: 1025 MVLLISAPVILIDEILKLVVRSHRRLLTKEKEA 1057
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|17342714|gb|AAL35972.1| type IIA calcium ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1796 bits (4652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 861/1049 (82%), Positives = 964/1049 (91%), Gaps = 3/1049 (0%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
MEEKPFPAWSW+V++CL+EY VKL+KGLSS EV+KRRE+YGWNEL KEKGKPLW+LVLEQ
Sbjct: 1 MEEKPFPAWSWSVDECLEEYGVKLEKGLSSNEVQKRREKYGWNELAKEKGKPLWKLVLEQ 60
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
FDD LVKILL AAFISF+LAYF S+SG FE YVEPLVI+LILVLNAIVGVWQE+NAE
Sbjct: 61 FDDMLVKILLAAAFISFLLAYFEGSESG---FEAYVEPLVIILILVLNAIVGVWQENNAE 117
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
KALEALK++QCES KVLRDGY VPDLPA LVPGDIVEL VGDKVPADMRVAALKTS+LR
Sbjct: 118 KALEALKELQCESIKVLRDGYFVPDLPARELVPGDIVELRVGDKVPADMRVAALKTSTLR 177
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
+EQSSLTGEAMP+LKGT+P+F+DDCELQAKENMVFAGTTVVNGSC+CIVI T MNTEIGK
Sbjct: 178 LEQSSLTGEAMPVLKGTNPIFMDDCELQAKENMVFAGTTVVNGSCICIVITTAMNTEIGK 237
Query: 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANV 300
IQKQIH+ASLEESDTPL+KKLDEFG RLTT+IG+VCLVVWI+NY+NF+SWDVVDGWP N+
Sbjct: 238 IQKQIHEASLEESDTPLKKKLDEFGGRLTTSIGIVCLVVWIINYKNFISWDVVDGWPTNI 297
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
QFSF+KCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT
Sbjct: 298 QFSFQKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 357
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMS TEFFTLG KTT R+ VEGTTYDPKDGGIVDW CYNMDANL
Sbjct: 358 TVICSDKTGTLTTNQMSATEFFTLGGKTTACRVISVEGTTYDPKDGGIVDWTCYNMDANL 417
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
AMA+ICAVCNDAGVY DG LFRATGLPTEAALKVLVEKMGFPD K RNK D +A N
Sbjct: 418 LAMAEICAVCNDAGVYFDGRLFRATGLPTEAALKVLVEKMGFPDTKSRNKTHDALVATNN 477
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
++D +T++LGCCEWW +RSKRVATLEFDR+RKSMSVIVREP G N+LLVKG+VESLLERS
Sbjct: 478 MVDCNTLKLGCCEWWNRRSKRVATLEFDRVRKSMSVIVREPDGQNRLLVKGAVESLLERS 537
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
S+VQLADGS+VP+D+ C +L+L R EMSSKGLRCLG+A KDELGEFSDYY+++HPAHKK
Sbjct: 538 SYVQLADGSLVPIDDQCRELLLQRLHEMSSKGLRCLGLACKDELGEFSDYYADTHPAHKK 597
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDP+ YS+IESDL+FVGVVGLRDPPR V KAI+DC+ AGI VMVITGDNKSTAEAIC+
Sbjct: 598 LLDPTYYSSIESDLIFVGVVGLRDPPREEVHKAIEDCKQAGIRVMVITGDNKSTAEAICK 657
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+IKLFS +EDLTG+S TGKEFM+LS ++Q++ L ++GGKVFSRAEPRHKQEIVR+LKEMG
Sbjct: 658 EIKLFSTDEDLTGQSLTGKEFMSLSHSEQVKLLLRNGGKVFSRAEPRHKQEIVRLLKEMG 717
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIY 780
E+VAMTGDGVNDAPALKLADIG+AMGITGTEVAKEASDMVLADDNF +IVSA+AEGR+IY
Sbjct: 718 EIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAIAEGRAIY 777
Query: 781 NNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADV 840
NNMKAFIRYMISSNVGEVISIFLTAALGIPEC+IPVQLLWVNLVTDGPPATALGFNPADV
Sbjct: 778 NNMKAFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADV 837
Query: 841 DIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLV 900
DIMQKPPRK DDALI++WVL RYLVIGSYVGIATVGIFVLWYT+ SF+GINLV DGHT++
Sbjct: 838 DIMQKPPRKSDDALISAWVLFRYLVIGSYVGIATVGIFVLWYTQASFLGINLVSDGHTVI 897
Query: 901 TLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMF 960
L QL NW EC +WSNF V+ + GGG++I FSNPCDYF++GKVKAMTLSLSVLVAIEMF
Sbjct: 898 ELTQLLNWRECPSWSNFNVSSFDAGGGRVIAFSNPCDYFSVGKVKAMTLSLSVLVAIEMF 957
Query: 961 NSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLV 1020
NSLNALSE+NSL T+PPWRNPWLL AM++S LHCLILY+PFL++VFGV PL+LNEWFLV
Sbjct: 958 NSLNALSEENSLRTLPPWRNPWLLAAMTISFALHCLILYIPFLSEVFGVAPLSLNEWFLV 1017
Query: 1021 ILVSAPVILIDEVLKFVGRNRRLSGKKEK 1049
IL+SAPVILIDE+LK R++R K+++
Sbjct: 1018 ILISAPVILIDEILKLAVRSQRRKTKEKE 1046
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|350538145|ref|NP_001234073.1| calcium-transporting ATPase, endoplasmic reticulum-type [Solanum lycopersicum] gi|68052031|sp|Q42883.1|ECAP_SOLLC RecName: Full=Calcium-transporting ATPase, endoplasmic reticulum-type gi|170378|gb|AAA34138.1| Ca2+-ATPase [Solanum lycopersicum] gi|4206311|gb|AAD11617.1| Ca2+-ATPase [Solanum lycopersicum] gi|4206313|gb|AAD11618.1| Ca2+-ATPase [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
Score = 1771 bits (4586), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 857/1047 (81%), Positives = 951/1047 (90%), Gaps = 1/1047 (0%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
MEEKPFPAWSW+V+QCLKEY VKL+KGLS+ EV+KRRERYG NEL+KEKGKPLW+LVLEQ
Sbjct: 1 MEEKPFPAWSWSVDQCLKEYQVKLEKGLSTYEVDKRRERYGLNELEKEKGKPLWRLVLEQ 60
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
FDDTLVKILL AAFISF+LAY + ++G+SGFE YVEPLVI+ ILVLNAIVGVWQESNAE
Sbjct: 61 FDDTLVKILLGAAFISFVLAYVNQDETGESGFEAYVEPLVILWILVLNAIVGVWQESNAE 120
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
KALEALK++Q ES KVLRDGYLVPD PA LVPGDIVEL VGDKVPADMRVA LK+S+LR
Sbjct: 121 KALEALKEMQGESAKVLRDGYLVPDFPAKELVPGDIVELRVGDKVPADMRVATLKSSTLR 180
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
VEQSSLTGE+MP+ K T + DDCELQAKENMVFAGTTVVNGSC+CIV+NTGM TEIGK
Sbjct: 181 VEQSSLTGESMPVTKSTDFLATDDCELQAKENMVFAGTTVVNGSCICIVVNTGMCTEIGK 240
Query: 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANV 300
IQ+QIHDAS+EESDTPL+KKLDEFGNRLT AIG+VCLVVW +NY+ FLSW+VVD WP++
Sbjct: 241 IQRQIHDASMEESDTPLKKKLDEFGNRLTFAIGVVCLVVWAINYKYFLSWEVVDDWPSDF 300
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
+FSFEKC YYFKIAVALAVAAIPEGLP+VITTCLALGTRKMAQKNAIVRKL SVETLGCT
Sbjct: 301 RFSFEKCAYYFKIAVALAVAAIPEGLPSVITTCLALGTRKMAQKNAIVRKLQSVETLGCT 360
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMSV+EFFTLGRKTT R+F VEGTTYDPKDGGI++W C MDANL
Sbjct: 361 TVICSDKTGTLTTNQMSVSEFFTLGRKTTACRVFGVEGTTYDPKDGGIMNWNCCKMDANL 420
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
MA+ICA+CNDAGV+CDG LF+ATGLPTEAALKVLVEKMG PD K R KI D Q+ ++Y
Sbjct: 421 LLMAEICAICNDAGVFCDGRLFKATGLPTEAALKVLVEKMGVPDSKARCKIRDAQIVSSY 480
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
LID +TV+LGCC+WW KRSKRVATLEFDR+RKSM VIVREP G N+LLVKG+ ESLLERS
Sbjct: 481 LIDRNTVKLGCCDWWMKRSKRVATLEFDRVRKSMGVIVREPNGSNRLLVKGAFESLLERS 540
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
++VQLADGS VPLDE C QL+L + LEMSSKGLRCLG+AYKD+LGE S YY+ +HPAHKK
Sbjct: 541 TYVQLADGSTVPLDESCRQLLLLKQLEMSSKGLRCLGLAYKDDLGELSGYYAATHPAHKK 600
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDPSCYS+IESDLVFVGVVGLRDPPR V +A++DCR AGI++MVITGDNKSTAEA+CR
Sbjct: 601 LLDPSCYSSIESDLVFVGVVGLRDPPREEVHRAVNDCRRAGIKIMVITGDNKSTAEAVCR 660
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+I+LFS E+L G SFTGKEFMA SS QQIE LS+ GGKVFSRAEPRHKQEIVRMLKEMG
Sbjct: 661 EIQLFSNGENLRGSSFTGKEFMAFSSQQQIEILSQDGGKVFSRAEPRHKQEIVRMLKEMG 720
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIY 780
E+VAMTGDGVNDAPALKLADIG+AMGITGTEVAKEASDMVLADDNF +IVSAVAEGRSIY
Sbjct: 721 EIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIY 780
Query: 781 NNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADV 840
NNMKAFIRYMISSNVGEVISIFLTA LGIPECLIPVQLLWVNLVTDGPPATALGFNPADV
Sbjct: 781 NNMKAFIRYMISSNVGEVISIFLTAVLGIPECLIPVQLLWVNLVTDGPPATALGFNPADV 840
Query: 841 DIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLV 900
DIMQKPPRK DALINSWV RY+VIGSYVGIATVGIF++WYT+ SF+GIN+V DGHTLV
Sbjct: 841 DIMQKPPRKNTDALINSWVFFRYMVIGSYVGIATVGIFIVWYTQASFLGINIVSDGHTLV 900
Query: 901 TLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMF 960
L QLRNWGECSTW+NFTV+P+ G ++ITFS+PC+YFT+GKVKAMTLSLSVLVAIEMF
Sbjct: 901 ELSQLRNWGECSTWTNFTVSPFK-AGNRLITFSDPCEYFTVGKVKAMTLSLSVLVAIEMF 959
Query: 961 NSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLV 1020
NSLNALSEDNSL+ MPPWRNPWLLVAMS+S LH +ILYVPFLAD+FG+VPL+L EW LV
Sbjct: 960 NSLNALSEDNSLIKMPPWRNPWLLVAMSLSFALHSVILYVPFLADIFGIVPLSLYEWLLV 1019
Query: 1021 ILVSAPVILIDEVLKFVGRNRRLSGKK 1047
IL+SAPVILIDEVLKFVGR RR + K
Sbjct: 1020 ILLSAPVILIDEVLKFVGRRRRRTKLK 1046
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15236991|ref|NP_191999.1| Ca2+-transporting ATPase [Arabidopsis thaliana] gi|12230024|sp|O23087.1|ECA2_ARATH RecName: Full=Calcium-transporting ATPase 2, endoplasmic reticulum-type gi|2252852|gb|AAB62850.1| similar to the cation transport ATPases family [Arabidopsis thaliana] gi|4185853|emb|CAA10659.1| Ca2+-ATPase [Arabidopsis thaliana] gi|7267429|emb|CAB80899.1| Ca2+-transporting ATPase-like protein [Arabidopsis thaliana] gi|332656553|gb|AEE81953.1| Ca2+-transporting ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1696 bits (4391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 823/1051 (78%), Positives = 934/1051 (88%), Gaps = 7/1051 (0%)
Query: 2 EEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQF 61
EEK F AWSW+VEQCLKEY +LDKGL+S +V+ RR++YG+NEL KEKGKPLW LVLEQF
Sbjct: 3 EEKSFSAWSWSVEQCLKEYKTRLDKGLTSEDVQIRRQKYGFNELAKEKGKPLWHLVLEQF 62
Query: 62 DDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEK 121
DDTLVKILL AAFISF+LA+ SGFE +VEP VIVLIL+LNA+VGVWQESNAEK
Sbjct: 63 DDTLVKILLGAAFISFVLAFLGEEHGSGSGFEAFVEPFVIVLILILNAVVGVWQESNAEK 122
Query: 122 ALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRV 181
ALEALK++QCES KVLRDG ++P+LPA LVPGDIVEL VGDKVPADMRV+ LKTS+LRV
Sbjct: 123 ALEALKEMQCESAKVLRDGNVLPNLPARELVPGDIVELNVGDKVPADMRVSGLKTSTLRV 182
Query: 182 EQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKI 241
EQSSLTGEAMP+LKG + V +DDCELQ KENMVFAGTTVVNGSCVCIV + GM+TEIGKI
Sbjct: 183 EQSSLTGEAMPVLKGANLVVMDDCELQGKENMVFAGTTVVNGSCVCIVTSIGMDTEIGKI 242
Query: 242 QKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGW-PANV 300
Q+QIH+ASLEES+TPL+KKLDEFG+RLTTAI +VC++VW++NY+NF+SWDVVDG+ P N+
Sbjct: 243 QRQIHEASLEESETPLKKKLDEFGSRLTTAICIVCVLVWMINYKNFVSWDVVDGYKPVNI 302
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
+FSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT
Sbjct: 303 KFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 362
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMS TEFFTLG KTT +R+F V GTTYDPKDGGIVDW C NMDANL
Sbjct: 363 TVICSDKTGTLTTNQMSATEFFTLGGKTTTTRVFSVSGTTYDPKDGGIVDWGCNNMDANL 422
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
QA+A+IC++CNDAGV+ +G LFRATGLPTEAALKVLVEKMG P+ K I + N+
Sbjct: 423 QAVAEICSICNDAGVFYEGKLFRATGLPTEAALKVLVEKMGIPEKKNSENIEE---VTNF 479
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
+ S+V+L CC+WW KRSK+VATLEFDR+RKSMSVIV EP G N+LLVKG+ ES+LERS
Sbjct: 480 SDNGSSVKLACCDWWNKRSKKVATLEFDRVRKSMSVIVSEPNGQNRLLVKGAAESILERS 539
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
S QLADGS+V LDE +++L +H EM+SKGLRCLG+AYKDELGEFSDY SE HP+HKK
Sbjct: 540 SFAQLADGSLVALDESSREVILKKHSEMTSKGLRCLGLAYKDELGEFSDYSSEEHPSHKK 599
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDPS YS IE++L+FVGVVGLRDPPR V +AI+DCR AGI VMVITGDNKSTAEAIC
Sbjct: 600 LLDPSSYSNIETNLIFVGVVGLRDPPREEVGRAIEDCRDAGIRVMVITGDNKSTAEAICC 659
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+I+LFS NEDL+ SFTGKEFM+L ++++ E LSK GGKVFSRAEPRHKQEIVRMLKEMG
Sbjct: 660 EIRLFSENEDLSQSSFTGKEFMSLPASRRSEILSKSGGKVFSRAEPRHKQEIVRMLKEMG 719
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIY 780
E+VAMTGDGVNDAPALKLADIG+AMGITGTEVAKEASDMVLADDNF +IVSAVAEGRSIY
Sbjct: 720 EIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIY 779
Query: 781 NNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADV 840
NNMKAFIRYMISSNVGEVISIFLTAALGIPEC+IPVQLLWVNLVTDGPPATALGFNPAD+
Sbjct: 780 NNMKAFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADI 839
Query: 841 DIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLV 900
DIM+KPPRK DD LI+SWVL+RYLVIGSYVG+ATVGIFVLWYT+ SF+GI+L+ DGHTLV
Sbjct: 840 DIMKKPPRKSDDCLIDSWVLIRYLVIGSYVGVATVGIFVLWYTQASFLGISLISDGHTLV 899
Query: 901 TLPQLRNWGECSTW-SNFTVAPYAVGGG-QMITF-SNPCDYFTIGKVKAMTLSLSVLVAI 957
+ QL+NW ECS+W +NFT PY V GG + I F +NPCDYFT+GKVK MTLSL+VLVAI
Sbjct: 900 SFTQLQNWSECSSWGTNFTATPYTVAGGLRTIAFENNPCDYFTLGKVKPMTLSLTVLVAI 959
Query: 958 EMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEW 1017
EMFNSLNALSEDNSL+TMPPWRNPWLLVAM+VS LHC+ILYVPFLA+VFG+VPL+ EW
Sbjct: 960 EMFNSLNALSEDNSLLTMPPWRNPWLLVAMTVSFALHCVILYVPFLANVFGIVPLSFREW 1019
Query: 1018 FLVILVSAPVILIDEVLKFVGRNRRLSGKKE 1048
F+VILVS PVILIDE LKF+GR RR KK+
Sbjct: 1020 FVVILVSFPVILIDEALKFIGRCRRTRIKKK 1050
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297810071|ref|XP_002872919.1| calcium-transporting ATPase 2, endoplasmic reticulum-type [Arabidopsis lyrata subsp. lyrata] gi|297318756|gb|EFH49178.1| calcium-transporting ATPase 2, endoplasmic reticulum-type [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1691 bits (4378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 822/1053 (78%), Positives = 936/1053 (88%), Gaps = 9/1053 (0%)
Query: 2 EEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQF 61
EEK F AWSW+VEQCLKEY +LDKGL+S +++ RR++YG+NEL KEKGKPLW LVLEQF
Sbjct: 3 EEKSFSAWSWSVEQCLKEYKTRLDKGLTSEDIQFRRQKYGFNELAKEKGKPLWHLVLEQF 62
Query: 62 DDTLVKILLVAAFISFILAYFHSSDS--GDSGFEDYVEPLVIVLILVLNAIVGVWQESNA 119
DDTLVKILL AAFISF+LA+ S+ SGFE +VEP VIVLIL+LNA+VGVWQESNA
Sbjct: 63 DDTLVKILLGAAFISFVLAFLGESEEHGSGSGFEAFVEPFVIVLILILNAVVGVWQESNA 122
Query: 120 EKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSL 179
EKALEALK++QCES KVLRDG ++P+LPA LVPGDIVEL VGDKVPADMRV+ LKTS+L
Sbjct: 123 EKALEALKEMQCESAKVLRDGTVLPNLPARELVPGDIVELNVGDKVPADMRVSGLKTSTL 182
Query: 180 RVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIG 239
RVEQSSLTGEAMP+LKG +PV DDCELQ KENMVFAGTTVVNGSCVCIV + GM+TEIG
Sbjct: 183 RVEQSSLTGEAMPVLKGANPVVTDDCELQGKENMVFAGTTVVNGSCVCIVTSIGMDTEIG 242
Query: 240 KIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGW-PA 298
KIQ+QIH+ASLEES+TPL+KKLDEFG+RLTTAI +VC++VWI+NY+NF+SWDVVDG+ P
Sbjct: 243 KIQRQIHEASLEESETPLKKKLDEFGSRLTTAICIVCVLVWIINYKNFVSWDVVDGYKPV 302
Query: 299 NVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLG 358
N++FSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLG
Sbjct: 303 NIRFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLG 362
Query: 359 CTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDA 418
CTTVICSDKTGTLTTNQMS TEFFTLG KTT +R+F V GTTYDPKDGGIVDW NMDA
Sbjct: 363 CTTVICSDKTGTLTTNQMSATEFFTLGGKTTTTRVFSVNGTTYDPKDGGIVDWGSNNMDA 422
Query: 419 NLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAA 478
NLQA+A+IC++CNDAGV+ +G LFRATGLPTEAALKVLVEKMG P+ K I +
Sbjct: 423 NLQAVAEICSICNDAGVFYEGKLFRATGLPTEAALKVLVEKMGIPEKKNGENIEE---VV 479
Query: 479 NYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLE 538
N+ + S+V+L CC+WW KRSK+VATLEFDR+RKSMSVIVR+P G N+LLVKG+ ES+LE
Sbjct: 480 NFSNNGSSVKLACCDWWNKRSKKVATLEFDRVRKSMSVIVRKPNGQNRLLVKGAAESILE 539
Query: 539 RSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAH 598
RSS QLADGS+VPLD+ +++L +H EM+SKGLRCLG+AYKDELGEFSDY +E HP+H
Sbjct: 540 RSSFAQLADGSLVPLDDSSREVILKKHSEMTSKGLRCLGLAYKDELGEFSDYSTEEHPSH 599
Query: 599 KKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAI 658
KKLLDPS YS IE++L+FVGVVGLRDPPR V +AI+DCR AGI VMVITGDNKSTAEAI
Sbjct: 600 KKLLDPSSYSNIETNLIFVGVVGLRDPPREEVGRAIEDCRDAGIRVMVITGDNKSTAEAI 659
Query: 659 CRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKE 718
C +I+LFS NEDL+ SFTGKEFM+ ++++ E LSK GGKVFSRAEPRHKQEIVRMLKE
Sbjct: 660 CCEIRLFSENEDLSQSSFTGKEFMSFPASRRSEILSKSGGKVFSRAEPRHKQEIVRMLKE 719
Query: 719 MGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRS 778
MGE+VAMTGDGVNDAPALKLADIG+AMGITGTEVAKEASDMVLADDNF +IVSAVAEGRS
Sbjct: 720 MGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRS 779
Query: 779 IYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPA 838
IYNNMKAFIRYMISSNVGEVISIFLTAALGIPEC+IPVQLLWVNLVTDGPPATALGFNPA
Sbjct: 780 IYNNMKAFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPA 839
Query: 839 DVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHT 898
D+DIM+KPPRK DD LI+SWVL+RYLVIGSYVG+ATVGIFVLWYT+ SF+GI+L+ DGHT
Sbjct: 840 DIDIMKKPPRKSDDCLIDSWVLIRYLVIGSYVGVATVGIFVLWYTQASFLGISLISDGHT 899
Query: 899 LVTLPQLRNWGECSTW-SNFTVAPYAVGGG-QMITF-SNPCDYFTIGKVKAMTLSLSVLV 955
LV+ QL+NW ECS+W +NFT PY + GG + I F +N CDYFT+GKVK MTLSLSVLV
Sbjct: 900 LVSFNQLQNWSECSSWGTNFTATPYTIAGGLKTIAFDNNSCDYFTLGKVKPMTLSLSVLV 959
Query: 956 AIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLN 1015
AIEMFNSLNALSEDNSL+TMPPWRNPWLLVAM+VS GLHC+ILYVPFLA+VFG+VPL+
Sbjct: 960 AIEMFNSLNALSEDNSLLTMPPWRNPWLLVAMTVSFGLHCVILYVPFLANVFGIVPLSFR 1019
Query: 1016 EWFLVILVSAPVILIDEVLKFVGRNRRLSGKKE 1048
EWF+VILVS PVILIDE LKF+GR RR KK+
Sbjct: 1020 EWFVVILVSFPVILIDEALKFIGRCRRTRIKKK 1052
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302785838|ref|XP_002974690.1| hypothetical protein SELMODRAFT_102055 [Selaginella moellendorffii] gi|300157585|gb|EFJ24210.1| hypothetical protein SELMODRAFT_102055 [Selaginella moellendorffii] | Back alignment and taxonomy information |
|---|
Score = 1467 bits (3797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 743/1040 (71%), Positives = 850/1040 (81%), Gaps = 14/1040 (1%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
M EK +PAW+ +VE+C ++ V KGLS EV RRERYGWNEL +E+GKPLW+LVLEQ
Sbjct: 1 MGEKAYPAWARSVEECARDVGVDPSKGLSGEEVIARRERYGWNELKRERGKPLWKLVLEQ 60
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSG-DSGFEDYVEPLVIVLILVLNAIVGVWQESNA 119
FDDTLV+ILL AA +SF+L Y + G +S YVEPLVIV+IL++NA+VGVWQESNA
Sbjct: 61 FDDTLVRILLGAAVVSFLLTYIDGKNKGAESELTAYVEPLVIVMILIINAVVGVWQESNA 120
Query: 120 EKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSL 179
E+ALEALK++Q E+ KVLRDG L+ DLPA LVPGD+VEL VGDKVPADMR+A+LKTS+
Sbjct: 121 ERALEALKEMQPENAKVLRDGQLLGDLPARELVPGDVVELRVGDKVPADMRIASLKTSTF 180
Query: 180 RVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIG 239
R+EQSSLTGE++P++KG V +D ELQ K+ MVFAGTTVVNGSC C+V +TGMNTEIG
Sbjct: 181 RIEQSSLTGESVPVIKGLQAVESEDIELQGKDCMVFAGTTVVNGSCFCVVTSTGMNTEIG 240
Query: 240 KIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPAN 299
KIQ QI +A+LEE DTPL+KKLDEFG RLT IG++CL+VW++NY+ FLSWDVV GWP N
Sbjct: 241 KIQAQIQEAALEEDDTPLKKKLDEFGERLTFVIGMICLLVWVINYKYFLSWDVVGGWPRN 300
Query: 300 VQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGC 359
V+FSFEKCTYYF+IAVALAVAAIPEGLPAVITT LALGTRKMAQKNAIVRKLPSVETLGC
Sbjct: 301 VRFSFEKCTYYFEIAVALAVAAIPEGLPAVITTSLALGTRKMAQKNAIVRKLPSVETLGC 360
Query: 360 TTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDAN 419
TTVICSDKTGTLTTNQMSV EF G R F VEGTTY+P DG I+ P +MD N
Sbjct: 361 TTVICSDKTGTLTTNQMSVMEFAGNGGSAGEVREFSVEGTTYNPDDGEILGLPV-SMDRN 419
Query: 420 LQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAAN 479
LQ +A+I AVCNDA + G FRA+G+PTEAALKVLVEK+G PD K KI
Sbjct: 420 LQTIAQIAAVCNDAAITYKGGQFRASGMPTEAALKVLVEKIGLPDAKEYVKICLNP---- 475
Query: 480 YLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLER 539
R GCC+WW +R KRVA LEFDR RKSMSVIV+ +G + LLVKG+VE++LER
Sbjct: 476 --------RAGCCDWWFRRVKRVAALEFDRYRKSMSVIVQNSSGQSTLLVKGAVENVLER 527
Query: 540 SSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHK 599
S +QL DG+VV LD +LS+ MSSK LRCLG+AYKD+LGE S Y ESHPAHK
Sbjct: 528 CSFMQLMDGTVVELDNASRAAILSKLNTMSSKALRCLGLAYKDDLGELSTYDGESHPAHK 587
Query: 600 KLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAIC 659
KLLDPS YS IESDLV+ G+VGLRDPPR V A+DDCR AGI VMVITGDNK+TAEAIC
Sbjct: 588 KLLDPSNYSAIESDLVYCGMVGLRDPPRDEVKSAMDDCREAGIRVMVITGDNKNTAEAIC 647
Query: 660 RQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEM 719
R+I +F E L G+SFTGK+FMALS+ Q+ + LS GG+VFSRAEPRHKQEIVRMLK+
Sbjct: 648 REIGVFYNGESLAGKSFTGKDFMALSTEQRCKVLSGSGGRVFSRAEPRHKQEIVRMLKDA 707
Query: 720 GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSI 779
GEVVAMTGDGVNDAPALKLADIG+AMGITGTEVAKEA+DMVLADDNF +IVSAVAEGRSI
Sbjct: 708 GEVVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEAADMVLADDNFSTIVSAVAEGRSI 767
Query: 780 YNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPAD 839
YNNMKAFIRYMISSN+GEV SIFLTAALG+PE LIPVQLLWVNLVTDGPPATALGFNP D
Sbjct: 768 YNNMKAFIRYMISSNIGEVASIFLTAALGMPEGLIPVQLLWVNLVTDGPPATALGFNPPD 827
Query: 840 VDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTL 899
+DIM+KPPRK +D LIN+WVLLRY+VIG YVG+ATVGIF LWYT SF+GI+L DGH+L
Sbjct: 828 LDIMKKPPRKSNDKLINAWVLLRYMVIGLYVGVATVGIFALWYTHDSFLGIDLSSDGHSL 887
Query: 900 VTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEM 959
VT QL +WGEC TW FTVAP+ VG SNPCDYF GKVKA TLSLSVLVAIEM
Sbjct: 888 VTFSQLTHWGECPTWEGFTVAPFTVGSRIYSFDSNPCDYFAAGKVKATTLSLSVLVAIEM 947
Query: 960 FNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFL 1019
FNSLNALSED SL+ MPPWRNPWLLVAM+ SLGLH +ILYVP LA VFG+VPL+ EW L
Sbjct: 948 FNSLNALSEDGSLLVMPPWRNPWLLVAMAASLGLHFIILYVPLLAQVFGIVPLSWREWLL 1007
Query: 1020 VILVSAPVILIDEVLKFVGR 1039
V++VS PVILIDEVLKF+GR
Sbjct: 1008 VLVVSLPVILIDEVLKFLGR 1027
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Source: Selaginella moellendorffii Species: Selaginella moellendorffii Genus: Selaginella Family: Selaginellaceae Order: Selaginellales Class: Isoetopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1051 | ||||||
| UNIPROTKB|Q42883 | 1048 | LCA1 "Calcium-transporting ATP | 0.990 | 0.993 | 0.806 | 0.0 | |
| TAIR|locus:2134623 | 1054 | ECA2 "ER-type Ca2+-ATPase 2" [ | 0.995 | 0.992 | 0.768 | 0.0 | |
| TAIR|locus:2026555 | 1061 | ECA4 "endomembrane-type CA-ATP | 0.967 | 0.958 | 0.651 | 0.0 | |
| TAIR|locus:2026580 | 1061 | ECA1 "ER-type Ca2+-ATPase 1" [ | 0.967 | 0.958 | 0.651 | 0.0 | |
| TAIR|locus:2201916 | 998 | ECA3 "endoplasmic reticulum-ty | 0.610 | 0.643 | 0.419 | 1.4e-227 | |
| WB|WBGene00004736 | 1059 | sca-1 [Caenorhabditis elegans | 0.780 | 0.774 | 0.490 | 1.5e-225 | |
| ZFIN|ZDB-GENE-090501-2 | 1056 | si:dkey-28b4.8 "si:dkey-28b4.8 | 0.807 | 0.803 | 0.486 | 3.5e-224 | |
| ASPGD|ASPL0000030946 | 1006 | AN5743 [Emericella nidulans (t | 0.791 | 0.827 | 0.487 | 3e-221 | |
| UNIPROTKB|P70083 | 996 | atp2a1 "Sarcoplasmic/endoplasm | 0.784 | 0.827 | 0.481 | 2.2e-220 | |
| UNIPROTKB|F1MPR3 | 1015 | ATP2A2 "Uncharacterized protei | 0.517 | 0.535 | 0.505 | 1.6e-184 |
| UNIPROTKB|Q42883 LCA1 "Calcium-transporting ATPase, endoplasmic reticulum-type" [Solanum lycopersicum (taxid:4081)] | Back alignment and assigned GO terms |
|---|
Score = 4409 (1557.1 bits), Expect = 0., P = 0.
Identities = 840/1042 (80%), Positives = 932/1042 (89%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
MEEKPFPAWSW+V+QCLKEY VKL+KGLS+ EV+KRRERYG NEL+KEKGKPLW+LVLEQ
Sbjct: 1 MEEKPFPAWSWSVDQCLKEYQVKLEKGLSTYEVDKRRERYGLNELEKEKGKPLWRLVLEQ 60
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYXXXXXXXXXXXXXXXXXXWQESNAE 120
FDDTLVKILL AAFISF+LAY + ++G+SGFE Y WQESNAE
Sbjct: 61 FDDTLVKILLGAAFISFVLAYVNQDETGESGFEAYVEPLVILWILVLNAIVGVWQESNAE 120
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
KALEALK++Q ES KVLRDGYLVPD PA LVPGDIVEL VGDKVPADMRVA LK+S+LR
Sbjct: 121 KALEALKEMQGESAKVLRDGYLVPDFPAKELVPGDIVELRVGDKVPADMRVATLKSSTLR 180
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
VEQSSLTGE+MP+ K T + DDCELQAKENMVFAGTTVVNGSC+CIV+NTGM TEIGK
Sbjct: 181 VEQSSLTGESMPVTKSTDFLATDDCELQAKENMVFAGTTVVNGSCICIVVNTGMCTEIGK 240
Query: 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANV 300
IQ+QIHDAS+EESDTPL+KKLDEFGNRLT AIG+VCLVVW +NY+ FLSW+VVD WP++
Sbjct: 241 IQRQIHDASMEESDTPLKKKLDEFGNRLTFAIGVVCLVVWAINYKYFLSWEVVDDWPSDF 300
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
+FSFEKC YYFKIAVALAVAAIPEGLP+VITTCLALGTRKMAQKNAIVRKL SVETLGCT
Sbjct: 301 RFSFEKCAYYFKIAVALAVAAIPEGLPSVITTCLALGTRKMAQKNAIVRKLQSVETLGCT 360
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMSV+EFFTLGRKTT R+F VEGTTYDPKDGGI++W C MDANL
Sbjct: 361 TVICSDKTGTLTTNQMSVSEFFTLGRKTTACRVFGVEGTTYDPKDGGIMNWNCCKMDANL 420
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
MA+ICA+CNDAGV+CDG LF+ATGLPTEAALKVLVEKMG PD K R KI D Q+ ++Y
Sbjct: 421 LLMAEICAICNDAGVFCDGRLFKATGLPTEAALKVLVEKMGVPDSKARCKIRDAQIVSSY 480
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
LID +TV+LGCC+WW KRSKRVATLEFDR+RKSM VIVREP G N+LLVKG+ ESLLERS
Sbjct: 481 LIDRNTVKLGCCDWWMKRSKRVATLEFDRVRKSMGVIVREPNGSNRLLVKGAFESLLERS 540
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
++VQLADGS VPLDE C QL+L + LEMSSKGLRCLG+AYKD+LGE S YY+ +HPAHKK
Sbjct: 541 TYVQLADGSTVPLDESCRQLLLLKQLEMSSKGLRCLGLAYKDDLGELSGYYAATHPAHKK 600
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDPSCYS+IESDLVFVGVVGLRDPPR V +A++DCR AGI++MVITGDNKSTAEA+CR
Sbjct: 601 LLDPSCYSSIESDLVFVGVVGLRDPPREEVHRAVNDCRRAGIKIMVITGDNKSTAEAVCR 660
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+I+LFS E+L G SFTGKEFMA SS QQIE LS+ GGKVFSRAEPRHKQEIVRMLKEMG
Sbjct: 661 EIQLFSNGENLRGSSFTGKEFMAFSSQQQIEILSQDGGKVFSRAEPRHKQEIVRMLKEMG 720
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIY 780
E+VAMTGDGVNDAPALKLADIG+AMGITGTEVAKEASDMVLADDNF +IVSAVAEGRSIY
Sbjct: 721 EIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIY 780
Query: 781 NNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADV 840
NNMKAFIRYMISSNVGEVISIFLTA LGIPECLIPVQLLWVNLVTDGPPATALGFNPADV
Sbjct: 781 NNMKAFIRYMISSNVGEVISIFLTAVLGIPECLIPVQLLWVNLVTDGPPATALGFNPADV 840
Query: 841 DIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLV 900
DIMQKPPRK DALINSWV RY+VIGSYVGIATVGIF++WYT+ SF+GIN+V DGHTLV
Sbjct: 841 DIMQKPPRKNTDALINSWVFFRYMVIGSYVGIATVGIFIVWYTQASFLGINIVSDGHTLV 900
Query: 901 TLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMF 960
L QLRNWGECSTW+NFTV+P+ G ++ITFS+PC+YFT+GKVKAMTLSLSVLVAIEMF
Sbjct: 901 ELSQLRNWGECSTWTNFTVSPFKAGN-RLITFSDPCEYFTVGKVKAMTLSLSVLVAIEMF 959
Query: 961 NSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLV 1020
NSLNALSEDNSL+ MPPWRNPWLLVAMS+S LH +ILYVPFLAD+FG+VPL+L EW LV
Sbjct: 960 NSLNALSEDNSLIKMPPWRNPWLLVAMSLSFALHSVILYVPFLADIFGIVPLSLYEWLLV 1019
Query: 1021 ILVSAPVILIDEVLKFVGRNRR 1042
IL+SAPVILIDEVLKFVGR RR
Sbjct: 1020 ILLSAPVILIDEVLKFVGRRRR 1041
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| TAIR|locus:2134623 ECA2 "ER-type Ca2+-ATPase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4219 (1490.2 bits), Expect = 0., P = 0.
Identities = 810/1054 (76%), Positives = 919/1054 (87%)
Query: 2 EEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQF 61
EEK F AWSW+VEQCLKEY +LDKGL+S +V+ RR++YG+NEL KEKGKPLW LVLEQF
Sbjct: 3 EEKSFSAWSWSVEQCLKEYKTRLDKGLTSEDVQIRRQKYGFNELAKEKGKPLWHLVLEQF 62
Query: 62 DDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYXXXXXXXXXXXXXXXXXXWQESNAEK 121
DDTLVKILL AAFISF+LA+ SGFE + WQESNAEK
Sbjct: 63 DDTLVKILLGAAFISFVLAFLGEEHGSGSGFEAFVEPFVIVLILILNAVVGVWQESNAEK 122
Query: 122 ALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRV 181
ALEALK++QCES KVLRDG ++P+LPA LVPGDIVEL VGDKVPADMRV+ LKTS+LRV
Sbjct: 123 ALEALKEMQCESAKVLRDGNVLPNLPARELVPGDIVELNVGDKVPADMRVSGLKTSTLRV 182
Query: 182 EQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKI 241
EQSSLTGEAMP+LKG + V +DDCELQ KENMVFAGTTVVNGSCVCIV + GM+TEIGKI
Sbjct: 183 EQSSLTGEAMPVLKGANLVVMDDCELQGKENMVFAGTTVVNGSCVCIVTSIGMDTEIGKI 242
Query: 242 QKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGW-PANV 300
Q+QIH+ASLEES+TPL+KKLDEFG+RLTTAI +VC++VW++NY+NF+SWDVVDG+ P N+
Sbjct: 243 QRQIHEASLEESETPLKKKLDEFGSRLTTAICIVCVLVWMINYKNFVSWDVVDGYKPVNI 302
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
+FSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT
Sbjct: 303 KFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 362
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMS TEFFTLG KTT +R+F V GTTYDPKDGGIVDW C NMDANL
Sbjct: 363 TVICSDKTGTLTTNQMSATEFFTLGGKTTTTRVFSVSGTTYDPKDGGIVDWGCNNMDANL 422
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
QA+A+IC++CNDAGV+ +G LFRATGLPTEAALKVLVEKMG P+ K I + N+
Sbjct: 423 QAVAEICSICNDAGVFYEGKLFRATGLPTEAALKVLVEKMGIPEKKNSENIEEV---TNF 479
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
+ S+V+L CC+WW KRSK+VATLEFDR+RKSMSVIV EP G N+LLVKG+ ES+LERS
Sbjct: 480 SDNGSSVKLACCDWWNKRSKKVATLEFDRVRKSMSVIVSEPNGQNRLLVKGAAESILERS 539
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
S QLADGS+V LDE +++L +H EM+SKGLRCLG+AYKDELGEFSDY SE HP+HKK
Sbjct: 540 SFAQLADGSLVALDESSREVILKKHSEMTSKGLRCLGLAYKDELGEFSDYSSEEHPSHKK 599
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDPS YS IE++L+FVGVVGLRDPPR V +AI+DCR AGI VMVITGDNKSTAEAIC
Sbjct: 600 LLDPSSYSNIETNLIFVGVVGLRDPPREEVGRAIEDCRDAGIRVMVITGDNKSTAEAICC 659
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+I+LFS NEDL+ SFTGKEFM+L ++++ E LSK GGKVFSRAEPRHKQEIVRMLKEMG
Sbjct: 660 EIRLFSENEDLSQSSFTGKEFMSLPASRRSEILSKSGGKVFSRAEPRHKQEIVRMLKEMG 719
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIY 780
E+VAMTGDGVNDAPALKLADIG+AMGITGTEVAKEASDMVLADDNF +IVSAVAEGRSIY
Sbjct: 720 EIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIY 779
Query: 781 NNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADV 840
NNMKAFIRYMISSNVGEVISIFLTAALGIPEC+IPVQLLWVNLVTDGPPATALGFNPAD+
Sbjct: 780 NNMKAFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADI 839
Query: 841 DIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLV 900
DIM+KPPRK DD LI+SWVL+RYLVIGSYVG+ATVGIFVLWYT+ SF+GI+L+ DGHTLV
Sbjct: 840 DIMKKPPRKSDDCLIDSWVLIRYLVIGSYVGVATVGIFVLWYTQASFLGISLISDGHTLV 899
Query: 901 TLPQLRNWGECSTW-SNFTVAPYAVGGG-QMITF-SNPCDYFTIGKVKAMTLSLSVLVAI 957
+ QL+NW ECS+W +NFT PY V GG + I F +NPCDYFT+GKVK MTLSL+VLVAI
Sbjct: 900 SFTQLQNWSECSSWGTNFTATPYTVAGGLRTIAFENNPCDYFTLGKVKPMTLSLTVLVAI 959
Query: 958 EMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEW 1017
EMFNSLNALSEDNSL+TMPPWRNPWLLVAM+VS LHC+ILYVPFLA+VFG+VPL+ EW
Sbjct: 960 EMFNSLNALSEDNSLLTMPPWRNPWLLVAMTVSFALHCVILYVPFLANVFGIVPLSFREW 1019
Query: 1018 FLVILVSAPVILIDEVLKFVGRNRRLSGKKE-KT 1050
F+VILVS PVILIDE LKF+GR RR KK+ KT
Sbjct: 1020 FVVILVSFPVILIDEALKFIGRCRRTRIKKKIKT 1053
|
|
| TAIR|locus:2026555 ECA4 "endomembrane-type CA-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3405 (1203.7 bits), Expect = 0., P = 0.
Identities = 675/1036 (65%), Positives = 808/1036 (77%)
Query: 6 FPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTL 65
FPAW V +C +++ V +KGLS+ EV KR + YG NEL+K +G +++L+LEQF+DTL
Sbjct: 24 FPAWGKDVSECEEKFGVSREKGLSTDEVLKRHQIYGLNELEKPEGTSIFKLILEQFNDTL 83
Query: 66 VKILLVAAFISFILAYFHSSDSGDSGFEDYXXXXXXXXXXXXXXXXXXWQESNAEKALEA 125
V+ILL AA ISF+LA+F + G+ G + WQE+NAEKALEA
Sbjct: 84 VRILLAAAVISFVLAFFDGDEGGEMGITAFVEPLVIFLILIVNAIVGIWQETNAEKALEA 143
Query: 126 LKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSS 185
LK+IQ + V+RDG V LPA LVPGDIVEL VGDKVPADMRV AL +S+LRVEQ S
Sbjct: 144 LKEIQSQQATVMRDGTKVSSLPAKELVPGDIVELRVGDKVPADMRVVALISSTLRVEQGS 203
Query: 186 LTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQI 245
LTGE+ + K T V ++ ++Q K+ MVFAGTTVVNG+C+C+V +TGMNTEIG++ QI
Sbjct: 204 LTGESEAVSKTTKHVD-ENADIQGKKCMVFAGTTVVNGNCICLVTDTGMNTEIGRVHSQI 262
Query: 246 HDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFE 305
+A+ E DTPL+KKL+EFG LT IGL+C +VW++N + FLSW+ VDGWP N +FSFE
Sbjct: 263 QEAAQHEEDTPLKKKLNEFGEVLTMIIGLICALVWLINVKYFLSWEYVDGWPRNFKFSFE 322
Query: 306 KCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICS 365
KCTYYF+IAVALAVAAIPEGLPAVITTCLALGTRKMAQKNA+VRKLPSVETLGCTTVICS
Sbjct: 323 KCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICS 382
Query: 366 DKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAK 425
DKTGTLTTNQM+V++ +G + R F+VEGT++DP+DG I DWP MDANLQ +AK
Sbjct: 383 DKTGTLTTNQMAVSKLVAMGSRIGTLRSFNVEGTSFDPRDGKIEDWPTGRMDANLQMIAK 442
Query: 426 ICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSS 485
I A+CNDA V F + G+PTEAALKVLVEKMGFP+ G N+ S D +
Sbjct: 443 IAAICNDANVEKSDQQFVSRGMPTEAALKVLVEKMGFPE--GLNEASS---------DGN 491
Query: 486 TVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQL 545
+R CC W++ +R+ATLEFDR RKSM V+V +G LLVKG+VE++LERS+H+QL
Sbjct: 492 VLR--CCRLWSELEQRIATLEFDRDRKSMGVMVDSSSGKKLLLVKGAVENVLERSTHIQL 549
Query: 546 ADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYY-SESHPAHKKLLDP 604
DGS LD+ L+L +MS LRCLG AY D +F+ Y SE HPAH++LL+P
Sbjct: 550 LDGSTRELDQYSRDLILQSLHDMSLSALRCLGFAYSDVPSDFATYDGSEDHPAHQQLLNP 609
Query: 605 SCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKL 664
S YS+IES+LVFVG VGLRDPPR V +AI DCR AGI VMVITGDNKSTAEAICR+I +
Sbjct: 610 SNYSSIESNLVFVGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKSTAEAICREIGV 669
Query: 665 FSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVA 724
F +ED++ RS TGKEFM + Q L + GG +FSRAEP+HKQEIVR+LKE GEVVA
Sbjct: 670 FEADEDISSRSLTGKEFMDVKD--QKNHLRQTGGLLFSRAEPKHKQEIVRLLKEDGEVVA 727
Query: 725 MTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMK 784
MTGDGVNDAPALKLADIGVAMGI+GTEVAKEASD+VLADDNF +IV+AV EGRSIYNNMK
Sbjct: 728 MTGDGVNDAPALKLADIGVAMGISGTEVAKEASDLVLADDNFSTIVAAVGEGRSIYNNMK 787
Query: 785 AFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQ 844
AFIRYMISSN+GEV SIFLTAALGIPE +IPVQLLWVNLVTDGPPATALGFNP D DIM+
Sbjct: 788 AFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMK 847
Query: 845 KPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQ 904
KPPR+ DD+LI +W+L RY+VIG YVG+ATVG+F++WYT SFMGI+L DGH+LV+ Q
Sbjct: 848 KPPRRSDDSLITAWILFRYMVIGLYVGVATVGVFIIWYTHNSFMGIDLSQDGHSLVSYSQ 907
Query: 905 LRNWGECSTWSNFTVAPYAVGGGQMITF-SNPCDYFTIGKVKAMTLSLSVLVAIEMFNSL 963
L +WG+CS+W F V+P+ G Q +F SNPCDYF GK+KA TLSLSVLVAIEMFNSL
Sbjct: 908 LAHWGQCSSWEGFKVSPFTAGS-QTFSFDSNPCDYFQQGKIKASTLSLSVLVAIEMFNSL 966
Query: 964 NALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLVILV 1023
NALSED SLVTMPPW NPWLL+AM+VS GLH +ILYVPFLA VFG+VPL+LNEW LV+ V
Sbjct: 967 NALSEDGSLVTMPPWVNPWLLLAMAVSFGLHFVILYVPFLAQVFGIVPLSLNEWLLVLAV 1026
Query: 1024 SAPVILIDEVLKFVGR 1039
S PVILIDEVLKFVGR
Sbjct: 1027 SLPVILIDEVLKFVGR 1042
|
|
| TAIR|locus:2026580 ECA1 "ER-type Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3398 (1201.2 bits), Expect = 0., P = 0.
Identities = 675/1036 (65%), Positives = 807/1036 (77%)
Query: 6 FPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTL 65
FPAW+ V +C + + V +KGLSS EV KR + YG NEL+K +G +++L+LEQF+DTL
Sbjct: 24 FPAWAKDVAECEEHFVVSREKGLSSDEVLKRHQIYGLNELEKPEGTSIFKLILEQFNDTL 83
Query: 66 VKILLVAAFISFILAYFHSSDSGDSGFEDYXXXXXXXXXXXXXXXXXXWQESNAEKALEA 125
V+ILL AA ISF+LA+F + G+ G + WQE+NAEKALEA
Sbjct: 84 VRILLAAAVISFVLAFFDGDEGGEMGITAFVEPLVIFLILIVNAIVGIWQETNAEKALEA 143
Query: 126 LKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSS 185
LK+IQ + V+RDG V LPA LVPGDIVEL VGDKVPADMRV AL +S+LRVEQ S
Sbjct: 144 LKEIQSQQATVMRDGTKVSSLPAKELVPGDIVELRVGDKVPADMRVVALISSTLRVEQGS 203
Query: 186 LTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQI 245
LTGE+ + K T V ++ ++Q K+ MVFAGTTVVNG+C+C+V +TGMNTEIG++ QI
Sbjct: 204 LTGESEAVSKTTKHVD-ENADIQGKKCMVFAGTTVVNGNCICLVTDTGMNTEIGRVHSQI 262
Query: 246 HDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFE 305
+A+ E DTPL+KKL+EFG LT IGL+C +VW++N + FLSW+ VDGWP N +FSFE
Sbjct: 263 QEAAQHEEDTPLKKKLNEFGEVLTMIIGLICALVWLINVKYFLSWEYVDGWPRNFKFSFE 322
Query: 306 KCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICS 365
KCTYYF+IAVALAVAAIPEGLPAVITTCLALGTRKMAQKNA+VRKLPSVETLGCTTVICS
Sbjct: 323 KCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICS 382
Query: 366 DKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAK 425
DKTGTLTTNQM+V++ +G + R F+VEGT++DP+DG I DWP MDANLQ +AK
Sbjct: 383 DKTGTLTTNQMAVSKLVAMGSRIGTLRSFNVEGTSFDPRDGKIEDWPMGRMDANLQMIAK 442
Query: 426 ICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSS 485
I A+CNDA V F + G+PTEAALKVLVEKMGFP+ G N+ S D
Sbjct: 443 IAAICNDANVEQSDQQFVSRGMPTEAALKVLVEKMGFPE--GLNEASS---------DGD 491
Query: 486 TVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQL 545
+R CC W++ +R+ATLEFDR RKSM V+V +G+ LLVKG+VE++LERS+H+QL
Sbjct: 492 VLR--CCRLWSELEQRIATLEFDRDRKSMGVMVDSSSGNKLLLVKGAVENVLERSTHIQL 549
Query: 546 ADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYY-SESHPAHKKLLDP 604
DGS LD+ L+L +MS LRCLG AY D +F+ Y SE HPAH++LL+P
Sbjct: 550 LDGSKRELDQYSRDLILQSLRDMSLSALRCLGFAYSDVPSDFATYDGSEDHPAHQQLLNP 609
Query: 605 SCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKL 664
S YS+IES+L+FVG VGLRDPPR V +AI DCR AGI VMVITGDNKSTAEAICR+I +
Sbjct: 610 SNYSSIESNLIFVGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKSTAEAICREIGV 669
Query: 665 FSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVA 724
F +ED++ RS TG EFM + Q L + GG +FSRAEP+HKQEIVR+LKE GEVVA
Sbjct: 670 FEADEDISSRSLTGIEFMDVQD--QKNHLRQTGGLLFSRAEPKHKQEIVRLLKEDGEVVA 727
Query: 725 MTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMK 784
MTGDGVNDAPALKLADIGVAMGI+GTEVAKEASDMVLADDNF +IV+AV EGRSIYNNMK
Sbjct: 728 MTGDGVNDAPALKLADIGVAMGISGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYNNMK 787
Query: 785 AFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQ 844
AFIRYMISSN+GEV SIFLTAALGIPE +IPVQLLWVNLVTDGPPATALGFNP D DIM+
Sbjct: 788 AFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMK 847
Query: 845 KPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQ 904
KPPR+ DD+LI +W+L RY+VIG YVG+ATVG+F++WYT SFMGI+L DGH+LV+ Q
Sbjct: 848 KPPRRSDDSLITAWILFRYMVIGLYVGVATVGVFIIWYTHSSFMGIDLSQDGHSLVSYSQ 907
Query: 905 LRNWGECSTWSNFTVAPYAVGGGQMITF-SNPCDYFTIGKVKAMTLSLSVLVAIEMFNSL 963
L +WG+CS+W F V+P+ G Q +F SNPCDYF GK+KA TLSLSVLVAIEMFNSL
Sbjct: 908 LAHWGQCSSWEGFKVSPFTAGS-QTFSFDSNPCDYFQQGKIKASTLSLSVLVAIEMFNSL 966
Query: 964 NALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLVILV 1023
NALSED SLVTMPPW NPWLL+AM+VS GLH +ILYVPFLA VFG+VPL+LNEW LV+ V
Sbjct: 967 NALSEDGSLVTMPPWVNPWLLLAMAVSFGLHFVILYVPFLAQVFGIVPLSLNEWLLVLAV 1026
Query: 1024 SAPVILIDEVLKFVGR 1039
S PVILIDEVLKFVGR
Sbjct: 1027 SLPVILIDEVLKFVGR 1042
|
|
| TAIR|locus:2201916 ECA3 "endoplasmic reticulum-type calcium-transporting ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1146 (408.5 bits), Expect = 1.4e-227, Sum P(3) = 1.4e-227
Identities = 295/704 (41%), Positives = 400/704 (56%)
Query: 8 AWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVK 67
A++ +V + L + V KGLS +V YG N L +EK P W+LVL+QFDD LVK
Sbjct: 4 AYARSVSEVLDFFGVDPTKGLSDSQVVHHSRLYGRNVLPEEKRTPFWKLVLKQFDDLLVK 63
Query: 68 ILLVAAFISFILAYFHSSDSGDSGFEDYXXXXXXXXXXXXXXXXXXWQESNAEKALEALK 127
IL+VAA +SF+LA + G++G + E+NAEKALE L+
Sbjct: 64 ILIVAAIVSFVLALAN----GETGLTAFLEPFVILLILAANAAVGVITETNAEKALEELR 119
Query: 128 KIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLT 187
Q VLR+G LPA LVPGDIVE+ VG K+PAD+R+ + +++ RV+Q+ LT
Sbjct: 120 AYQANIATVLRNGCF-SILPATELVPGDIVEVTVGCKIPADLRMIEMSSNTFRVDQAILT 178
Query: 188 GEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHD 247
GE+ + K + Q K+N++F+GT VV G +VI G NT +G I HD
Sbjct: 179 GESCSVEKDVDCTLTTNAVYQDKKNILFSGTDVVAGRGRAVVIGVGSNTAMGSI----HD 234
Query: 248 ASLEESD--TPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFE 305
+ L+ D TPL+KKLDEFG+ L I +C++VW++N +F P++ F F+
Sbjct: 235 SMLQTDDEATPLKKKLDEFGSFLAKVIAGICVLVWVVNIGHFSD-------PSHGGF-FK 286
Query: 306 KCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICS 365
+YFKIAVALAVAAIPEGLPAV+TTCLALGT+KMA+ NAIVR LPSVETLGCTTVICS
Sbjct: 287 GAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKKMARLNAIVRSLPSVETLGCTTVICS 346
Query: 366 DKTGTLTTNQMSVTEFFTL--GRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQA- 422
DKTGTLTTN MSV++ + + F V GTTY P +G + D +D Q+
Sbjct: 347 DKTGTLTTNMMSVSKICVVQSAEHGPMINEFTVSGTTYAP-EGTVFDSNGMQLDLPAQSP 405
Query: 423 ----MAKICAVCNDAGVYC--DGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQL 476
+A ++CND+ + D + G TE AL+VL EK+G P G + +
Sbjct: 406 CLHHLAMCSSLCNDSILQYNPDKDSYEKIGESTEVALRVLAEKVGLP---GFDSMPS--- 459
Query: 477 AANYLIDSSTVRLGCCE-WWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLV---KGS 532
A N L S R C +W + K+V LEF R RK MSV+ H Q+ V KG+
Sbjct: 460 ALNML--SKHERASYCNHYWENQFKKVYVLEFTRDRKMMSVLC----SHKQMDVMFSKGA 513
Query: 533 VESLLERSSHVQL-ADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYY 591
ES++ R + + DGSVVPL + SR + LRCL +A+K
Sbjct: 514 PESIIARCNKILCNGDGSVVPLTAAGRAELESRFYSFGDETLRCLALAFK---------- 563
Query: 592 SESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDN 651
+ P ++ + Y E+DL F+G+VG+ DPPR V A+ C AGI V+V+TGDN
Sbjct: 564 --TVPHGQQTIS---YDN-ENDLTFIGLVGMLDPPREEVRDAMLACMTAGIRVIVVTGDN 617
Query: 652 KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSK 695
KSTAE++CR+I F D +G S+T EF L + QQ AL +
Sbjct: 618 KSTAESLCRKIGAFDNLVDFSGMSYTASEFERLPAVQQTLALRR 661
|
|
| WB|WBGene00004736 sca-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 1901 (674.2 bits), Expect = 1.5e-225, Sum P(2) = 1.5e-225
Identities = 429/874 (49%), Positives = 571/874 (65%)
Query: 26 KGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSS 85
+GL+ ++VE R +YG NE+ E+GK LW+L+LEQFDD LVKILL+AA ISF+LA F
Sbjct: 21 EGLTPQQVETLRNKYGENEMPAEEGKSLWELILEQFDDLLVKILLLAAIISFVLALFEEH 80
Query: 86 DSGDSGFEDYXXXXXXXXXXXXXXXXXXWQESNAEKALEALKKIQCESGKVLRDGYL-VP 144
+ + WQE NAE A+EALK+ + E KV+R G+ +
Sbjct: 81 EDQTEAVTAFVEPFVILLILIANATVGVWQERNAESAIEALKEYEPEMAKVIRSGHHGIQ 140
Query: 145 DLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDD 204
+ A LVPGD+VE+ VGDK+PAD+R+ + ++++R++QS LTGE++ ++K T V
Sbjct: 141 MVRAKELVPGDLVEVSVGDKIPADLRLVKIYSTTIRIDQSILTGESVSVIKHTDSVPDPR 200
Query: 205 CELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEF 264
Q K+N +F+GT V +G IV TG+ TEIGKI+ ++ A E TPL++KLDEF
Sbjct: 201 AVNQDKKNCLFSGTNVASGKARGIVFGTGLTTEIGKIRTEM--AETENEKTPLQQKLDEF 258
Query: 265 GNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPE 324
G +L+ I ++C+ VW +N +F PA+ + YYFKIAVALAVAAIPE
Sbjct: 259 GEQLSKVISVICVAVWAINIGHFND-------PAHGGSWVKGAIYYFKIAVALAVAAIPE 311
Query: 325 GLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTL 384
GLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VICSDKTGTLTTNQMSV++ F
Sbjct: 312 GLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSKMFIA 371
Query: 385 GRKT--TISRI-FHVEGTTYDP-----KDGGIVDWPCYNMDANLQAMAKICAVCNDAGV- 435
G+ + I+ F + G+TY+P +G ++ P +L +A ICA+CND+ V
Sbjct: 372 GQASGDNINFTEFAISGSTYEPVGKVSTNGREIN-PAAGEFESLTELAMICAMCNDSSVD 430
Query: 436 YCDGP-LFRATGLPTEAALKVLVEKMGFPDVKGRNK--ISDTQLAANYLIDSSTVRLGCC 492
Y + ++ G TE AL VL EKM +V G +K +S +L + + ++
Sbjct: 431 YNETKKIYEKVGEATETALIVLAEKM---NVFGTSKAGLSPKELGG---VCNRVIQQ--- 481
Query: 493 EWWTKRSKRVATLEFDRIRKSMSVIVREPTGHN--QLLVKGSVESLLERSSHVQLADGSV 550
+W K+ TLEF R RKSMS +G + ++ VKG+ E +L R +HV++ +G
Sbjct: 482 KW-----KKEFTLEFSRDRKSMSAYCFPASGGSGAKMFVKGAPEGVLGRCTHVRV-NGQK 535
Query: 551 VPLDEPCWQLMLSRHLEMSS--KGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYS 608
VPL Q ++ + ++ + LRCL LG S S+ L D + +
Sbjct: 536 VPLTSAMTQKIVDQCVQYGTGRDTLRCLA------LGTIDTPVSVSN---MNLEDSTQFV 586
Query: 609 TIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGN 668
E D+ FVGVVG+ DPPR V +I C AGI V++ITGDNK+TAEAI R+I LF N
Sbjct: 587 KYEQDITFVGVVGMLDPPRTEVSDSIKACNHAGIRVIMITGDNKNTAEAIGRRIGLFGEN 646
Query: 669 EDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGD 728
ED TG+++TG+EF L QQ EA + K+F+R EP HK +IV +L+ GE+ AMTGD
Sbjct: 647 EDTTGKAYTGREFDDLPPEQQSEACRR--AKLFARVEPSHKSKIVDILQSQGEITAMTGD 704
Query: 729 GVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIR 788
GVNDAPALK A+IG++MG +GT VAK AS+MVLADDNF SIVSAV EGR+IYNNMK FIR
Sbjct: 705 GVNDAPALKKAEIGISMG-SGTAVAKSASEMVLADDNFASIVSAVEEGRAIYNNMKQFIR 763
Query: 789 YMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPR 848
Y+ISSNVGEV+SIF+ AALGIPE LIPVQLLWVNLVTDG PATALGFNP D+DIM + PR
Sbjct: 764 YLISSNVGEVVSIFMVAALGIPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRHPR 823
Query: 849 KIDDALINSWVLLRYLVIGSYVGIATVGIFVLWY 882
+D LI+ W+ RYL +G+YVG+ATVG + W+
Sbjct: 824 SANDGLISGWLFFRYLAVGTYVGVATVGASMWWF 857
|
|
| ZFIN|ZDB-GENE-090501-2 si:dkey-28b4.8 "si:dkey-28b4.8" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1913 (678.5 bits), Expect = 3.5e-224, Sum P(2) = 3.5e-224
Identities = 452/929 (48%), Positives = 587/929 (63%)
Query: 12 TVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLV 71
TVE+ L ++V GLSS ++ K RER+G NEL E+GK LW+LVLEQF+D LV+ILL+
Sbjct: 8 TVEEVLGYFSVNETTGLSSEQLRKSRERWGPNELPAEEGKSLWELVLEQFEDLLVRILLL 67
Query: 72 AAFISFILAYFHSSDSGDSGFEDYXXXXXXXXXXXXXXXXXXWQESNAEKALEALKKIQC 131
AA ISF LA+F + G+ + WQE NAE A+EALK+ +
Sbjct: 68 AACISFTLAWF---EEGEGTITAFVEPFVILLILIANAIVGVWQERNAENAIEALKQYEP 124
Query: 132 ESGKVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEA 190
E GKV R D V + A +VPGDIVE+ VGDKVPAD+R+ ++++++LRV+QS LTGE+
Sbjct: 125 EMGKVYRQDRKSVQRVRARDIVPGDIVEVAVGDKVPADIRLTSIRSTTLRVDQSILTGES 184
Query: 191 MPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASL 250
+ +LK T PV Q K+NM+F+GT + G + +V+ TG++TEIGKI+ ++ A+
Sbjct: 185 VSVLKHTDPVPDPRAVNQDKKNMLFSGTNIAAGRAIGVVVATGVHTEIGKIRDEM--AAT 242
Query: 251 EESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDG--WPANVQFSFEKCT 308
+ TPL++KLD+FG +L+ I ++C+ VW +N +F D V G W
Sbjct: 243 DPERTPLQQKLDQFGEQLSMVITVICVAVWGINIGHFN--DPVHGGSW-------LRGAV 293
Query: 309 YYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKT 368
YYFKIAVALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VICSDKT
Sbjct: 294 YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMARKNAIVRSLPSVETLGCTSVICSDKT 353
Query: 369 GTLTTNQMSVTEFFTL----GRKTTISRIFHVEGTTYDP-----KDGGIVDWPCYNMDAN 419
GTLTTNQMSV+ F + G + ++ F V G+TY P KDG V C +
Sbjct: 354 GTLTTNQMSVSRLFIVDMVAGERCLLNE-FTVTGSTYAPEGEVSKDG--VQVRCSQYEG- 409
Query: 420 LQAMAKICAVCNDAGV-YCDGP-LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLA 477
L MA ICA+CND+ + Y + +F G TE AL LVEKM + DT L
Sbjct: 410 LVEMASICALCNDSSLDYNESKGVFEKVGEATETALCCLVEKMN---------VFDTDLR 460
Query: 478 ANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSV------IVREPTGHNQLLVKG 531
+ S+ CC + ++ TLEF R RKSMSV + R +G ++ VKG
Sbjct: 461 G---LTSAERATACCSVIKQLMRKELTLEFSRDRKSMSVFCSPNKLTRSASGA-KMFVKG 516
Query: 532 SVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSS--KGLRCLGMAYKDELGEFSD 589
+ ES+LER ++++ G+ VPL + +LS E S LRCL MA +D
Sbjct: 517 APESVLERCRWIRVSGGTRVPLSSDLREQLLSTVREWGSGRDTLRCLAMATRD------- 569
Query: 590 YYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITG 649
S P L + + +S ESDL FVG VG+ DPPR V A+ CR AGI V++ITG
Sbjct: 570 --SPPDPRTLNLENSAAFSEYESDLTFVGCVGMLDPPRKEVLNAVRMCRQAGIRVIMITG 627
Query: 650 DNKSTAEAICRQIKLFSGNED------LTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703
DNK TA +ICRQ+ + + E+ L G TG+EF L Q +A + F+R
Sbjct: 628 DNKGTALSICRQVGIITEQEEEEAEGGLYGSGLTGREFDELPPHLQRQACRT--ARCFAR 685
Query: 704 AEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLAD 763
EP HK IV L+ + ++ AMTGDGVNDAPALK A+IG+AMG +GT VAK AS+M+LAD
Sbjct: 686 VEPTHKSRIVEYLQSLSDITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKSASEMILAD 744
Query: 764 DNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNL 823
DNF +IV+AV EGR+IYNNMK FIRY+ISSN+GEV+ IFLTAALG+PE LIPVQLLWVNL
Sbjct: 745 DNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVCIFLTAALGMPEALIPVQLLWVNL 804
Query: 824 VTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYT 883
VTDG PATALGFNP D+DIM +PPR + LI+SW+ RYL++G YVG ATVG W
Sbjct: 805 VTDGFPATALGFNPPDLDIMSRPPRSPKEPLISSWLFCRYLIVGCYVGAATVGAAAWW-- 862
Query: 884 KGSFMGINLVGDGHTLVTLPQLRNWGECS 912
FM + DG L T QL ++ +CS
Sbjct: 863 ---FMAAH---DGPKL-TFYQLSHYLQCS 884
|
|
| ASPGD|ASPL0000030946 AN5743 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 1886 (669.0 bits), Expect = 3.0e-221, Sum P(3) = 3.0e-221
Identities = 427/876 (48%), Positives = 568/876 (64%)
Query: 15 QCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAF 74
+ LK ++V GLSS +V R++YG N L +E PLW+LVLEQF D LV ILL +A
Sbjct: 11 EVLKHFDVTERSGLSSAQVSHSRQKYGPNALAEEPPTPLWELVLEQFKDQLVLILLGSAA 70
Query: 75 ISFILAYFHSSDSGDSGFEDYXXXXXXXXXXXXXXXXXXWQESNAEKALEALKKIQCESG 134
+SF+LA F SD + F D QES+AEKA+ AL++
Sbjct: 71 VSFVLALFEESDDW-TVFVDPAVILTILILNAIVGVT---QESSAEKAIAALQEYSANEA 126
Query: 135 KVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPIL 194
KV+RDG +V + A LVPGDIV + VGD+VPAD R+ A+ ++S RV+Q+ LTGE+ +
Sbjct: 127 KVVRDG-VVQRIKAEDLVPGDIVHVAVGDRVPADCRLLAIHSNSFRVDQAILTGESESVA 185
Query: 195 KGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESD 254
K T V Q + N++F+GTTVVNG+ +V+ TG +T IG I + I + + E
Sbjct: 186 KDTRAVSDRQAVKQDQTNILFSGTTVVNGNATAVVVLTGSSTAIGDIHESI-TSQISEP- 243
Query: 255 TPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIA 314
TPL++KL++FG+ L I ++C++VW++N +F GW YY KIA
Sbjct: 244 TPLKQKLNDFGDMLAKVITVICILVWVINIEHFND-PSHGGWAKGA-------IYYLKIA 295
Query: 315 VALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTN 374
V+L VAAIPEGL VITTCLALGTRKMAQKNA+VR LPSVETLG +VICSDKTGTLTTN
Sbjct: 296 VSLGVAAIPEGLAVVITTCLALGTRKMAQKNAVVRSLPSVETLGSCSVICSDKTGTLTTN 355
Query: 375 QMSVTEFFTLGRKTTISRIFHVEGTTYDPKDG----GIVDWPCYNMDANLQAMAKICAVC 430
QMSV + L + T + VEGTT+ P+ G V + ++ MA++ A C
Sbjct: 356 QMSVGKIVYLSQLGTGVEVIDVEGTTFAPEGSLSYNGQVVTNLAASSSTIRQMAEVMARC 415
Query: 431 NDAGVYCDGPL--FRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVR 488
N A + D F G PTE AL+VLVEK+G D +K+ L A+ + S+
Sbjct: 416 NAAAIAYDEKTGTFSCIGEPTEGALRVLVEKIGTDDAAMNDKL--LSLPASQKLHVSSA- 472
Query: 489 LGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQ-LLVKGSVESLLERSSHVQLA- 546
++ R AT EF R RKSMSV+V TG N+ LLVKG+ ES+LER S+ L
Sbjct: 473 -----YYESRLPLQATYEFSRDRKSMSVLVG--TGSNRRLLVKGAPESILERCSYALLGP 525
Query: 547 DGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSC 606
+G+ V L + L+ S +E +S+GLR + +A D++G ++P K
Sbjct: 526 NGARVSLTKAHLDLLSSEVVEYASRGLRVIALASVDDVG--------ANPLIHKASTSEE 577
Query: 607 YSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666
Y+ +E ++ +G+V + DPPR V +I C AGI V+VITGDN++TAE+ICR+I +F
Sbjct: 578 YAQLEQNMTLIGLVAMLDPPRVEVADSIKKCAEAGIRVIVITGDNQNTAESICREIGVFG 637
Query: 667 GNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMT 726
+EDL G+SFTG+EF +LS +Q+EA+ +FSR EP HK ++V +L+ +G VVAMT
Sbjct: 638 KDEDLKGKSFTGREFDSLSHNEQLEAVKS--ASLFSRTEPSHKSKLVDLLQSLGHVVAMT 695
Query: 727 GDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAF 786
GDGVNDAPALK +DIGVAMG TGT+VAK A+DMVL DDNF +I +AV EGRSIY+N + F
Sbjct: 696 GDGVNDAPALKKSDIGVAMG-TGTDVAKLAADMVLVDDNFATITTAVEEGRSIYSNTQQF 754
Query: 787 IRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKP 846
IRY+ISSN+GEV+SIFLTAALG+PE L+PVQLLWVNLVTDG PATAL FNPAD D+M++P
Sbjct: 755 IRYLISSNIGEVVSIFLTAALGMPEALVPVQLLWVNLVTDGLPATALSFNPADHDVMRRP 814
Query: 847 PRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWY 882
PRK D+ L+ W+L RYLVIG+YVG ATV +V W+
Sbjct: 815 PRKRDEPLVGGWLLFRYLVIGTYVGAATVFGYVWWF 850
|
|
| UNIPROTKB|P70083 atp2a1 "Sarcoplasmic/endoplasmic reticulum calcium ATPase 1" [Makaira nigricans (taxid:13604)] | Back alignment and assigned GO terms |
|---|
Score = 1867 (662.3 bits), Expect = 2.2e-220, Sum P(2) = 2.2e-220
Identities = 427/887 (48%), Positives = 566/887 (63%)
Query: 15 QCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAF 74
+CL + V GLS + +K +++G+NEL E+GK +W L++EQF+D LV+ILL+AA
Sbjct: 11 ECLSYFGVNEHTGLSPDQFKKNLDKFGYNELPAEEGKSIWDLIVEQFEDLLVRILLLAAC 70
Query: 75 ISFILAYFHSSDSGDSGFEDYXXXXXXXXXXXXXXXXXXWQESNAEKALEALKKIQCESG 134
ISF+LA+F + G+ + WQE NAE A+EALK+ + E G
Sbjct: 71 ISFVLAWF---EEGEETITAFVEPFVILLILIANAIVGVWQERNAEDAIEALKEYEPEMG 127
Query: 135 KVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPI 193
KV R D V + A +VPGDIVE+ VGDKVPAD+R+ ++K+++LRV+QS LTGE++ +
Sbjct: 128 KVYRSDRKSVQRIKAREIVPGDIVEVSVGDKVPADIRIVSIKSTTLRVDQSILTGESVSV 187
Query: 194 LKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEES 253
+K T V Q K+NM+F+GT + G + + I TG++TEIGKI+ Q+ A+ E+
Sbjct: 188 IKHTESVPDPRAVNQDKKNMLFSGTNIAAGKAIGVAIATGVSTEIGKIRDQM--AATEQE 245
Query: 254 DTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDG--WPANVQFSFEKCTYYF 311
TPL+ KLDEFG +L+ I L+C+ VW +N +F D V G W YYF
Sbjct: 246 KTPLQAKLDEFGEQLSKVISLICVAVWAINIGHFN--DPVHGGSW-------IRGAVYYF 296
Query: 312 KIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTL 371
KIAVALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VICSDKTGTL
Sbjct: 297 KIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTL 356
Query: 372 TTNQMSVTEFFTL----GRKTTISRIFHVEGTTYDPKD----GGIVDWPCYNMDANLQAM 423
TTNQM VT+ F + G ++ F + G+ Y P+ GG C D L +
Sbjct: 357 TTNQMCVTKMFIVKSVDGDHVDLNA-FDISGSKYTPEGEVSHGGSKT-NCSAYDG-LVEL 413
Query: 424 AKICAVCNDAGV-YCDGP-LFRATGLPTEAALKVLVEKMGF--PDVKGRNKISDTQLAAN 479
A ICA+CND+ + Y + ++ G TE AL LVEKM +VK ++I AN
Sbjct: 414 ATICALCNDSSLDYNESKKIYEKVGEATETALCCLVEKMNVFNSNVKNLSRIE----RAN 469
Query: 480 YLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHN--QLLVKGSVESLL 537
CC + K+ TLEF R RKSMSV G ++ VKG+ E ++
Sbjct: 470 ----------ACCTVIKQLMKKNFTLEFSRDRKSMSVYCTPAKGDGGAKMFVKGAPEGVI 519
Query: 538 ERSSHVQLADGSVVPLDEPCWQLMLS--RHLEMSSKGLRCLGMAYKDELGEFSDYYSESH 595
+R ++V++ + VPL + +++ R LRCL +A +D + + E
Sbjct: 520 DRCAYVRVGT-TRVPLTSAIKEKIMAVIRDWGTGRDTLRCLALATRDTPLKVEEMNLE-- 576
Query: 596 PAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTA 655
D + ++ E+D+ FVG VG+ DPPR V +I+ CR AGI V++ITGDNK TA
Sbjct: 577 -------DSTKFADYETDMTFVGCVGMLDPPRKEVTGSIELCRDAGIRVIMITGDNKGTA 629
Query: 656 EAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRM 715
AICR+I +F +ED++ +++TG+EF L S Q EA+ + F+R EP HK +IV
Sbjct: 630 IAICRRIGIFKEDEDVSNKAYTGREFDDLPSQDQAEAVRR--ACCFARVEPSHKSKIVEF 687
Query: 716 LKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAE 775
L+ ++ AMTGDGVNDAPALK A+IG+AMG +GT VAK AS+MVLADDNF SIV+AV E
Sbjct: 688 LQGNDDITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEE 746
Query: 776 GRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGF 835
GR+IYNNMK FIRY+ISSNVGEV+ IFLTAALG+PE LIPVQLLWVNLVTDG PATALGF
Sbjct: 747 GRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGF 806
Query: 836 NPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWY 882
NP D+DIM KPPR + LI+ W+ RY+ IG YVG ATVG W+
Sbjct: 807 NPPDLDIMGKPPRSPKEPLISGWLFFRYMAIGGYVGAATVGGAAWWF 853
|
|
| UNIPROTKB|F1MPR3 ATP2A2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1262 (449.3 bits), Expect = 1.6e-184, Sum P(3) = 1.6e-184
Identities = 299/592 (50%), Positives = 375/592 (63%)
Query: 309 YYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKT 368
YYFKIAVALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VICSDKT
Sbjct: 267 YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKT 326
Query: 369 GTLTTNQMSVTEFFTLGR---KTTISRIFHVEGTTYDPKDGGIV--DWPCYNMDANLQAM 423
GTLTTNQMSV F L + T F + G+TY P G I D P +
Sbjct: 327 GTLTTNQMSVCRMFILDKVEGDTCSLNEFTITGSTYAPI-GEIHKDDKPV--KCHQYDGL 383
Query: 424 AKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMG------FPDVKGRNKISDTQLA 477
++ +C C+ + L A K + EK+G + + + DT+L
Sbjct: 384 VELATIC----ALCND-----SALDYNEA-KGVYEKVGEATETALTCLVEKMNVFDTELK 433
Query: 478 ANYLIDSSTVRLGCCEWWTKR-SKRVATLEFDRIRKSMSVIV--REP--TGHNQLLVKGS 532
I+ R C K+ K+ TLEF R RKSMSV +P T +++ VKG+
Sbjct: 434 GLSKIE----RANACNSVIKQLMKKEFTLEFSRDRKSMSVYCTPNKPSRTSMSKMFVKGA 489
Query: 533 VESLLERSSHVQLADGSVVPLDEPCWQLMLS--RHLEMSSKGLRCLGMAYKDELGEFSDY 590
E +++R +H+++ + VP+ Q ++S R S LRCL +A D
Sbjct: 490 PEGVIDRCTHIRVGS-TKVPMTPGVKQKIMSVIREWGSGSDTLRCLALATHD-------- 540
Query: 591 YSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGD 650
+ L D + + E++L FVG VG+ DPPR V ++ CR AGI V++ITGD
Sbjct: 541 -NPLRREEMNLEDSANFIKYETNLTFVGCVGMLDPPRIEVASSVKLCRQAGIRVIMITGD 599
Query: 651 NKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQ 710
NK TA AICR+I +F +ED+T ++FTG+EF LS + Q EA + F+R EP HK
Sbjct: 600 NKGTAVAICRRIGIFRQDEDVTAKAFTGREFDELSPSAQREACLN--ARCFARVEPSHKS 657
Query: 711 EIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIV 770
+IV L+ E+ AMTGDGVNDAPALK ++IG+AMG +GT VAK AS+MVLADDNF +IV
Sbjct: 658 KIVEFLQSFDEITAMTGDGVNDAPALKKSEIGIAMG-SGTAVAKTASEMVLADDNFSTIV 716
Query: 771 SAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPA 830
+AV EGR+IYNNMK FIRY+ISSNVGEV+ IFLTAALG PE LIPVQLLWVNLVTDG PA
Sbjct: 717 AAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPA 776
Query: 831 TALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWY 882
TALGFNP D+DIM KPPR + LI+ W+ RYL IG YVG ATVG W+
Sbjct: 777 TALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWWF 828
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9YGL9 | AT2A3_CHICK | 3, ., 6, ., 3, ., 8 | 0.4863 | 0.9143 | 0.9222 | yes | no |
| O59868 | ATC1_SCHPO | 3, ., 6, ., 3, ., 8 | 0.3026 | 0.8268 | 0.9666 | yes | no |
| Q42883 | ECAP_SOLLC | 3, ., 6, ., 3, ., 8 | 0.8185 | 0.9952 | 0.9980 | N/A | no |
| O34431 | ATCL_BACSU | 3, ., 6, ., 3, ., 8 | 0.3414 | 0.8201 | 0.9685 | yes | no |
| O46674 | AT2A2_CANFA | 3, ., 6, ., 3, ., 8 | 0.4938 | 0.9134 | 0.9628 | yes | no |
| P37278 | ATCL_SYNE7 | 3, ., 6, ., 3, ., 8 | 0.3355 | 0.8563 | 0.9719 | yes | no |
| Q292Q0 | ATC1_DROPS | 3, ., 6, ., 3, ., 8 | 0.4900 | 0.9162 | 0.9610 | yes | no |
| P11507 | AT2A2_RAT | 3, ., 6, ., 3, ., 8 | 0.4924 | 0.9238 | 0.9309 | yes | no |
| P11607 | AT2A2_PIG | 3, ., 6, ., 3, ., 8 | 0.4938 | 0.9210 | 0.9289 | yes | no |
| O55143 | AT2A2_MOUSE | 3, ., 6, ., 3, ., 8 | 0.4933 | 0.9181 | 0.9243 | yes | no |
| Q7PPA5 | ATC1_ANOGA | 3, ., 6, ., 3, ., 8 | 0.4918 | 0.9172 | 0.9469 | yes | no |
| P22700 | ATC1_DROME | 3, ., 6, ., 3, ., 8 | 0.4871 | 0.9181 | 0.9460 | yes | no |
| P16615 | AT2A2_HUMAN | 3, ., 6, ., 3, ., 8 | 0.4924 | 0.9238 | 0.9318 | yes | no |
| O23087 | ECA2_ARATH | 3, ., 6, ., 3, ., 8 | 0.7830 | 0.9933 | 0.9905 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1051 | |||
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 0.0 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 0.0 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-140 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-134 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-127 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 2e-66 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 3e-64 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 3e-59 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 5e-57 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 5e-50 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 8e-47 | |
| pfam00689 | 175 | pfam00689, Cation_ATPase_C, Cation transporting AT | 2e-45 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 4e-45 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-40 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 7e-40 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 3e-39 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 2e-36 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 2e-33 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 2e-32 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 3e-28 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 1e-27 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-26 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 5e-26 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 7e-25 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 1e-24 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 9e-24 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 1e-22 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 4e-22 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 2e-20 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 4e-20 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 1e-19 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 3e-19 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 5e-19 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 6e-16 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 1e-15 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 3e-15 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 2e-14 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 1e-13 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 2e-12 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 1e-11 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 5e-09 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 7e-07 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 7e-06 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 1e-05 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 4e-05 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 9e-05 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 1e-04 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 6e-04 | |
| COG0561 | 264 | COG0561, Cof, Predicted hydrolases of the HAD supe | 0.002 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 0.002 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 1284 bits (3324), Expect = 0.0
Identities = 550/988 (55%), Positives = 670/988 (67%), Gaps = 76/988 (7%)
Query: 57 VLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQE 116
VLEQF+D LV+ILL+AA +SF+LA+F + + F VEP VI+LILV NAIVGVWQE
Sbjct: 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAF---VEPFVILLILVANAIVGVWQE 57
Query: 117 SNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKT 176
NAEKA+EALK+ + E KVLRDG + A LVPGDIVEL VGDKVPAD+RV +LKT
Sbjct: 58 RNAEKAIEALKEYESEHAKVLRDGRWSV-IKAKDLVPGDIVELAVGDKVPADIRVLSLKT 116
Query: 177 SSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNT 236
LRV+QS LTGE++ + K T V + Q K+NM+F+GT VV G +V+ TGM+T
Sbjct: 117 --LRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMST 174
Query: 237 EIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGW 296
EIGKI+ ++ A E+ DTPL+KKLDEFG L+ IGL+C++VW++N +F
Sbjct: 175 EIGKIRDEMRAA--EQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFND------- 225
Query: 297 PANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVET 356
PA + YYFKIAVALAVAAIPEGLPAVITTCLALGTRKMA+KNAIVRKLPSVET
Sbjct: 226 PALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVET 285
Query: 357 LGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYN- 415
LGCTTVICSDKTGTLTTNQMSV + L ++ F V GTTY P+ G I D
Sbjct: 286 LGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAG 345
Query: 416 -MDANLQAMAKICAVCNDAGVYCD--GPLFRATGLPTEAALKVLVEKMGFPDVKGRNKIS 472
DA L+ +A I A+CND+ + + ++ G TEAALKVLVEKMG P K N +S
Sbjct: 346 GQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATK--NGVS 403
Query: 473 DTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGS 532
+ A GC W + K++ATLEF R RKSMSV+ + TG+ L VKG+
Sbjct: 404 SKRRPAL----------GCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNK-LFVKGA 452
Query: 533 VESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSS-KGLRCLGMAYKDELGEFSDYY 591
E +LER +H+ DG VPL + +LS EM + K LRCL +A+KD +
Sbjct: 453 PEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDL 512
Query: 592 SESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDN 651
L DP+ + IESDL F+GVVG+ DPPR V AI+ CR AGI V++ITGDN
Sbjct: 513 ---------LSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDN 563
Query: 652 KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQE 711
K TAEAICR+I +FS +ED+T +SFTG+EF + +Q A +FSR EP HK E
Sbjct: 564 KETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACR--SAVLFSRVEPSHKSE 621
Query: 712 IVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVS 771
+V +L+E GE+VAMTGDGVNDAPALK ADIG+AMG +GTEVAKEASDMVLADDNF +IV+
Sbjct: 622 LVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVA 680
Query: 772 AVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPAT 831
AV EGR+IYNNMK FIRYMISSN+GEV+ IFLTAALGIPE LIPVQLLWVNLVTDG PAT
Sbjct: 681 AVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPAT 740
Query: 832 ALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGIN 891
ALGFNP D DIM KPPR+ D+ LI W+ RYLV+G YVG+ATVG FV WY
Sbjct: 741 ALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWY--------- 791
Query: 892 LVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSL 951
L ++ C S FT P F +P Y GK A T+SL
Sbjct: 792 ------------LLTHFTGCDEDS-FTTCP---------DFEDPDCYVFEGKQPARTISL 829
Query: 952 SVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVP 1011
SVLV IEMFN+LNALSED SL+ MPPW N WL+ A+ +S+ LH LILYVPFL+ +FGV P
Sbjct: 830 SVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLILYVPFLSRIFGVTP 889
Query: 1012 LNLNEWFLVILVSAPVILIDEVLKFVGR 1039
L+L +W +V+ +S PVIL+DEVLKF R
Sbjct: 890 LSLTDWLMVLKLSLPVILVDEVLKFFSR 917
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 754 bits (1948), Expect = 0.0
Identities = 361/1031 (35%), Positives = 523/1031 (50%), Gaps = 151/1031 (14%)
Query: 17 LKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFIS 76
L E GLS EV++R ++YG NEL +EK + L + L QF D + +LLVAA +S
Sbjct: 34 LLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLS 93
Query: 77 FILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKV 136
+ + + V+ +VI+L++V+NA++G QE AEKALEALKK+ KV
Sbjct: 94 AFVGDW---------VDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKV 144
Query: 137 LRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKG 196
LRDG V +PA LVPGDIV L GD VPAD+R+ L++S L V++S+LTGE++P+ K
Sbjct: 145 LRDGKFVE-IPASELVPGDIVLLEAGDVVPADLRL--LESSDLEVDESALTGESLPVEKQ 201
Query: 197 TSPVFLDDCELQAKE-NMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDT 255
P+ D L NM+F+GTTVV+G IV+ TG TE GKI + + +E T
Sbjct: 202 ALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTK--KEVKT 259
Query: 256 PLRKKLDEFGNRLTTAIGLVCLVVWIMN-YRNFLSWDVVDGWPANVQFSFEKCTYYFKIA 314
PL++KL++ G L ++ +V+++ +R F A
Sbjct: 260 PLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLES-----------------FLTA 302
Query: 315 VALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTN 374
+ALAVAA+PEGLPAV+T LALG ++MA+ NAIVR L ++ETLG VICSDKTGTLT N
Sbjct: 303 LALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQN 362
Query: 375 QMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAG 434
+M+V + + G I + L A+CN
Sbjct: 363 KMTVKKIYINGGGKDIDDKDLKD-------------------SPALLRFLLAAALCNSVT 403
Query: 435 VYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEW 494
+G G PTE AL EK+GF
Sbjct: 404 PEKNGWYQ--AGDPTEGALVEFAEKLGFSLDLSG-------------------------- 435
Query: 495 WTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLD 554
+A + FD RK MSVIV+ G L VKG+ E +LER + G + PL
Sbjct: 436 LEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI----GELEPLT 491
Query: 555 EPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDL 614
E + + E++S+GLR L +AYK +K + IESDL
Sbjct: 492 EEGLRTLEEAVKELASEGLRVLAVAYK------------KLDRAEKDDE---VDEIESDL 536
Query: 615 VFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGR 674
VF+G+ G+ DPPR V +AI++ R AGI+V +ITGD+ TA AI ++ + E +
Sbjct: 537 VFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIE--AEAESAL 594
Query: 675 SFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAP 734
G E ALS + E + + VF+R P K IV L++ G VVAMTGDGVNDAP
Sbjct: 595 VIDGAELDALSDEELAELVEEL--SVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAP 652
Query: 735 ALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSN 794
ALK AD+G+AMG GT+ AKEA+D+VL DDNF +IV AV EGR +Y N+K FI Y++S N
Sbjct: 653 ALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKN 712
Query: 795 VGEVISIFLTAALGIPEC-LIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKIDDA 853
VGEV+++ + + + L P+QLLW+NL+TD PA ALG + D+M++PPR ++
Sbjct: 713 VGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEG 772
Query: 854 LINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQLRNWGECST 913
L N + R+++I + + L Y
Sbjct: 773 LFNRKIFWRFILIIGLLSAILFILTFLLY------------------------------- 801
Query: 914 WSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLV 973
++ F + + T + +VLV I++ +L S +
Sbjct: 802 ---------------LLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFL 846
Query: 974 TMPPWRNPWLLVAMSVSLGLHCLILYVPFLA-DVFGVVPLNLNEWFLVILVSAPVILIDE 1032
+ + N +L +A+ V + L LI+++P L +F PL+L EW + I V+ ++ I
Sbjct: 847 SSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLIAIAVALLLLYIVV 906
Query: 1033 VLKFVGRNRRL 1043
+ ++R+L
Sbjct: 907 SELYKLKSRKL 917
|
Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 557 bits (1437), Expect = 0.0
Identities = 317/881 (35%), Positives = 475/881 (53%), Gaps = 123/881 (13%)
Query: 12 TVEQCLKEYNVKLDKGL-SSREVEKRRERYGWNELDKEKGKPLWQLVLEQF-DDTLVKIL 69
+VE+ + L GL SS+E RR +GWNE D E+ + LW+ L QF + L+ +L
Sbjct: 8 SVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLL 67
Query: 70 LVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKI 129
+ +A IS + +D V + +LI+V VG QE +EK+LEAL K+
Sbjct: 68 IASAVISVFMG----------NIDDAVSITLAILIVV---TVGFVQEYRSEKSLEALNKL 114
Query: 130 QCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGE 189
++R+G L L A LVPGD+V L VGD+VPAD+R+ ++ L +++S+LTGE
Sbjct: 115 VPPECHLIREGKLEHVL-ASTLVPGDLVCLSVGDRVPADLRI--VEAVDLSIDESNLTGE 171
Query: 190 AMPILKGTSPV----FLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQI 245
P+ K T+P+ D L + N+ F GT V G IV+ TG NTE G + K +
Sbjct: 172 TTPVSKVTAPIPAATNGD---LAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMM 228
Query: 246 HDASLEESDTPLRKKLDEFGNRLT----TAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQ 301
++E+ TPL+K +D G +L+ IG++CLV W +++L
Sbjct: 229 Q--AIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQG-KDWLE------------ 273
Query: 302 FSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTT 361
F I+V+LAVAAIPEGLP ++T LALG +M++K AIVRKLPSVETLG
Sbjct: 274 --------MFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVN 325
Query: 362 VICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQ 421
VICSDKTGTLT N M+VT+ +T T+ + DG ++ Y + +
Sbjct: 326 VICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLH-GFYTVA--VS 382
Query: 422 AMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYL 481
+ + +CN+A + G PT+ AL L+ K G D++
Sbjct: 383 RILEAGNLCNNAKFRNEADTL--LGNPTDVALIELLMKFGLDDLR--------------- 425
Query: 482 IDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLL-VKGSVESLLERS 540
+ RVA + F RK M+V +++ +KG+ E +L+
Sbjct: 426 ---------------ETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYC 470
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
++ Q DG + L + ++ EM+S GLR + A E G+
Sbjct: 471 TYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEKGQ-------------- 516
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
L F+G+VG+ DPPR GV +A+ G+ +++ITGD++ TA +I R
Sbjct: 517 -------------LTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIAR 563
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
++ + S T +S +G++ A+ Q + + K VF+RA P HK +IV+ L++ G
Sbjct: 564 RLGMPS----KTSQSVSGEKLDAMDDQQLSQIVPK--VAVFARASPEHKMKIVKALQKRG 617
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIY 780
+VVAMTGDGVNDAPALKLADIGVAMG TGT+VAKEA+DM+L DD+F +I+SA+ EG+ I+
Sbjct: 618 DVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIF 677
Query: 781 NNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADV 840
NN+K FI + +S++V + I L +G P L +Q+LW+N++ DGPPA +LG P D
Sbjct: 678 NNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDK 737
Query: 841 DIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLW 881
D+M+KPPR +D ++ ++ + LV S + I +FV
Sbjct: 738 DVMRKPPRPRNDKILTKDLIKKILV--SAIIIVVGTLFVFV 776
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 443 bits (1142), Expect = e-140
Identities = 302/1022 (29%), Positives = 459/1022 (44%), Gaps = 154/1022 (15%)
Query: 28 LSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDS 87
LSS +E+R + YG NEL ++ K Q+V D + +L VAA +S +L
Sbjct: 62 LSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLG-LPEPGE 120
Query: 88 GDSGFE----DYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLV 143
G + E + V LV V+++VL V +++ + L K Q V+R G
Sbjct: 121 GKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQ--KIAVIRGGQ-E 177
Query: 144 PDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLD 203
+ +V GDIV L GD VPAD + SL +++SS+TGE+ PI KG
Sbjct: 178 QQISIHDIVVGDIVSLSTGDVVPADG--VFISGLSLEIDESSITGESDPIKKG------- 228
Query: 204 DCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDE 263
++ + +GT V GS +V G+N+ GK+ ++ A E TPL++KL E
Sbjct: 229 ----PVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQA--GEDSTPLQEKLSE 282
Query: 264 FGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTY---YFKIAVALAVA 320
L IG + ++ + V + + + E +F IAV + V
Sbjct: 283 ----LAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVV 338
Query: 321 AIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTE 380
A+PEGLP +T LA +KM + N +VR L + ET+G T ICSDKTGTLT N MSV +
Sbjct: 339 AVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQ 398
Query: 381 FFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAG--VYCD 438
+ ++ V N+ +++ + N + V
Sbjct: 399 GYIGEQRFN-------------------VRDVLRNVPKHVRNILVEGISLNSSSEEVVDR 439
Query: 439 GPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKR 498
G G TE AL + F + R D VR
Sbjct: 440 GGKRAFIGSKTECAL------LDFGLLLLR--------------DYQEVR--------AE 471
Query: 499 SKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCW 558
K V F+ RK MSV+V+ G + KG+ E +L+ ++G P+ +
Sbjct: 472 EKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDK 531
Query: 559 QLMLSRHLEMSSKGLRCLGMAYKD-ELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFV 617
++S LR + +AY+D EF L +
Sbjct: 532 DRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYP-----------------NKGLTLI 574
Query: 618 GVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFT 677
GVVG++DP R GV +A+ +C+ AGI V ++TGDN TA+AI R + + G +
Sbjct: 575 GVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILT----FGGLAME 630
Query: 678 GKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALK 737
GKEF +L + L K +V +R+ P KQ +V MLK+MGEVVA+TGDG NDAPALK
Sbjct: 631 GKEFRSLVYEEMDPILPKL--RVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALK 688
Query: 738 LADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGE 797
LAD+G +MGI+GTEVAKEASD++L DDNF SIV AV GR++Y+N++ F+++ ++ NV
Sbjct: 689 LADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVA 748
Query: 798 VISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKIDDALINS 857
VI F+ + + L VQLLWVNL+ D A AL P ++ + P + LI+
Sbjct: 749 VILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISR 808
Query: 858 WVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNF 917
+ L Y V F+L + GS ++
Sbjct: 809 SMWKNILGQAGY---QLVVTFILLFAGGSIFDVS-------------------------- 839
Query: 918 TVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMFNSLNA--LSEDNSLVTM 975
G IT + TI + V +++FN +NA L E N +
Sbjct: 840 --------GPDEITSHQQGELNTI--------VFNTFVLLQLFNEINARKLYERNVFEGL 883
Query: 976 PPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLVILVSAPVILIDEVLK 1035
++N + M + G ++ V F F V L++ +W +L+ ++ +L+
Sbjct: 884 --FKNRIFVTIMGFTFG--FQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLR 939
Query: 1036 FV 1037
+
Sbjct: 940 LI 941
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 431 bits (1109), Expect = e-134
Identities = 312/1063 (29%), Positives = 493/1063 (46%), Gaps = 134/1063 (12%)
Query: 12 TVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLV 71
++++ ++Y L KGLS+ + R G N L P W Q +L +
Sbjct: 21 SLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWI 80
Query: 72 AAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQC 131
A + F+ +S + ++ +V+ ++++ +QE+ + K +E+ K +
Sbjct: 81 GAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVP 140
Query: 132 ESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAM 191
+ V+RDG + A +V GD+VE+ GD++PAD+R+ + +V+ SSLTGE+
Sbjct: 141 QQALVIRDGE-KMSINAEQVVVGDLVEVKGGDRIPADLRI--ISAQGCKVDNSSLTGESE 197
Query: 192 PILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDAS-L 250
P + SP F + L+ + N+ F T V G+ IV+NTG T +G+I AS L
Sbjct: 198 P--QTRSPEFTHENPLETR-NIAFFSTNCVEGTARGIVVNTGDRTVMGRIASL---ASGL 251
Query: 251 EESDTPLRKKLDEFGNRLT---TAIGLVCLVV-WIMNYRNFLSWDVVDGWPANVQFSFEK 306
E TP+ +++ F + +T +G+ ++ I+ Y W V F
Sbjct: 252 ENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGYT----------WLEAVIF---- 297
Query: 307 CTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSD 366
+ + VA +PEGL A +T CL L ++MA+KN +V+ L +VETLG T+ ICSD
Sbjct: 298 -------LIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSD 350
Query: 367 KTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKI 426
KTGTLT N+M+V + H TT D + G D A A+++I
Sbjct: 351 KTGTLTQNRMTVAHMW-------FDNQIHEADTTED-QSGVSFD----KSSATWLALSRI 398
Query: 427 CAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSST 486
+CN RA + + +L R D +A L+
Sbjct: 399 AGLCN-----------RAVFKAGQENVPIL----------KRAVAGDASESA--LLKCIE 435
Query: 487 VRLGCCEWWTKRSKRVATLEFDRIRK-SMSVIVRE-PTGHNQLLV-KGSVESLLERSSHV 543
+ LG +R+ +V + F+ K +S+ E P LLV KG+ E +LER S +
Sbjct: 436 LCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSI 495
Query: 544 QLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYY--SESHPAHKKL 601
L G PLDE + + +LE+ G R LG F Y E P +
Sbjct: 496 -LIHGKEQPLDEELKEAFQNAYLELGGLGERVLG---------FCHLYLPDEQFPEGFQ- 544
Query: 602 LDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ 661
D + +L FVG++ + DPPR V A+ CR AGI+V+++TGD+ TA+AI +
Sbjct: 545 FDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG 604
Query: 662 IKLFS-GN---EDLTGR----------------SFTGKEFMALSSTQQIEALSKHGGKVF 701
+ + S GN ED+ R G + ++S Q E L H VF
Sbjct: 605 VGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVF 664
Query: 702 SRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVL 761
+R P+ K IV + G +VA+TGDGVND+PALK ADIGVAMGI G++V+K+A+DM+L
Sbjct: 665 ARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMIL 724
Query: 762 ADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWV 821
DDNF SIV+ V EGR I++N+K I Y ++SN+ E+ + IP L + +L +
Sbjct: 725 LDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCI 784
Query: 822 NLVTDGPPATALGFNPADVDIMQKPPR-KIDDALINSWVL-LRYLVIGSYVGIATVGIFV 879
+L TD PA +L + A+ DIM++ PR D L+N ++ + Y IG + +
Sbjct: 785 DLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYF 844
Query: 880 LWYTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYF 939
+ + F+ ++LVG LR W + + GQ T+
Sbjct: 845 VILAENGFLPLHLVG----------LR-----VQWDDRWINDLEDSYGQEWTYEQR---- 885
Query: 940 TIGKVKAMTLSLSVLVAIEMFNSLNAL---SEDNSLVTMPPWRNPWLLVAMSVSLGLHCL 996
K T + V+I + + + + NS V +N L+ + L
Sbjct: 886 ---KYVEFTCHTAFFVSIVVVQWADLIICKTRRNS-VFQQGMKNKILIFGLFEETALAAF 941
Query: 997 ILYVPFLADVFGVVPLNLNEWFLVILVSAPVILIDEVLKFVGR 1039
+ Y P + + PL WF S + + DE+ K + R
Sbjct: 942 LSYCPGMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIR 984
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 412 bits (1061), Expect = e-127
Identities = 268/949 (28%), Positives = 460/949 (48%), Gaps = 99/949 (10%)
Query: 6 FPAWSWTVEQCLKEY-NVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDT 64
F A+ + E+ + +GL+ E + R + G N L+ + G ++L Q +
Sbjct: 4 FNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNA 63
Query: 65 LVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALE 124
+ +L++AA ISF D++E VI I+ LN ++G QE AEK ++
Sbjct: 64 MCMVLIIAAAISF-------------AMHDWIEGGVISAIIALNILIGFIQEYKAEKTMD 110
Query: 125 ALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQS 184
+LK + V+R+G + + LVPGDI L GD +PAD+R+ ++T + +++
Sbjct: 111 SLKNLASPMAHVIRNGK-SDAIDSHDLVPGDICLLKTGDTIPADLRL--IETKNFDTDEA 167
Query: 185 SLTGEAMPILKGTSPVFL--DDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQ 242
LTGE++P++K F +D + + N+ F+ + V G I I T +N+EIG I
Sbjct: 168 LLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIA 227
Query: 243 KQIHDAS-----LEESDTPLRKKLDEFGNRLTTAI--GLVCLVVWIMNYRNFLSWDVVDG 295
+ E+ D R+KL+++ ++T + + L V +R V+
Sbjct: 228 AGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILF 287
Query: 296 WPANVQFSFEKCTYYFKI-------AVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIV 348
A + + F + A+ LA++ IPE L AV++ +A+G M+++N IV
Sbjct: 288 CIAIIFAIIVMAAHKFDVDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIV 347
Query: 349 RKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFF------------------TLGRKTTI 390
RKL ++E LG ICSDKTGT+T +M + + G + I
Sbjct: 348 RKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGI 407
Query: 391 SRIFHVEGTTYDPKDGGI----------VDWPCYNMDANL-QAMAKICAVCNDAGVYCDG 439
R E + + D I +D P ++D +L + + A+ N A V+ D
Sbjct: 408 PRFSPYEYSHNEAADQDILKEFKDELKEIDLP-EDIDMDLFIKLLETAALANIATVFKDD 466
Query: 440 PL--FRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTK 497
++A G PTE A+ V +K P + + N D S++ + +
Sbjct: 467 ATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNEN---DQSSLSQHNEKPGSA 523
Query: 498 RSKRVATLEFDRIRKSMSVIVREPTGHN-QLLVKGSVESLLERSSHVQLADG-SVVPLDE 555
+ + +A FD K M+ I + G + KG+ E ++E S DG + PL++
Sbjct: 524 QFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLED 583
Query: 556 PCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLV 615
+L+++ ++++GLR L A K + + + + +T ESDL
Sbjct: 584 CDRELIIANMESLAAEGLRVLAFASK-------SFDKADNNDDQLKNETLNRATAESDLE 636
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGN------E 669
F+G++G+ DPPR A++ C AGI V ++TGD TA+AI +++ + N E
Sbjct: 637 FLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDE 696
Query: 670 DLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDG 729
+ TG +F ALS ++++ L K V +R P+ K +++ L AMTGDG
Sbjct: 697 IMDSMVMTGSQFDALSD-EEVDDL-KALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDG 754
Query: 730 VNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRY 789
VND+P+LK+A++G+AMGI G++VAK+ASD+VL+DDNF SI++A+ EGR +++N+ F+ +
Sbjct: 755 VNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLH 814
Query: 790 MISSNVGEVISIFLTAALG-------IPECLIPVQLLWVNLVTDGPPATALGFNPADVDI 842
+++ NV E I + + A P L PV++LW ++T PA LG A D+
Sbjct: 815 LLAENVAEAILLIIGLAFRDENGKSVFP--LSPVEILWCIMITSCFPAMGLGLEKAAPDL 872
Query: 843 MQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGIN 891
M + P + + +++ G ++G + + F G G
Sbjct: 873 MDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFT-----GILYGFG 916
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 233 bits (596), Expect = 2e-66
Identities = 120/428 (28%), Positives = 184/428 (42%), Gaps = 120/428 (28%)
Query: 422 AMAKICAVCNDAGV--------YCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISD 473
+AK + + Y TG T+ K+ ++ + K N S
Sbjct: 220 RLAKKGILVRNLNALEELGKVDYL---CSDKTGTLTKN--KMTLQGVYIDGGKEDNSSSL 274
Query: 474 TQLAANYL----IDSSTVR----LGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHN 525
NYL ++ + ++ +G + K K + F + K MSVIV P G +
Sbjct: 275 VACDNNYLSGDPMEKALLKSAELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSD 334
Query: 526 QLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELG 585
L VKG+ E +LER ++ +E LE++ +GLR L A K+
Sbjct: 335 LLFVKGAPEFILERCNN----------YEEKY--------LELARQGLRVLAFASKE--- 373
Query: 586 EFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVM 645
+E DL F+G++ DP R + I++ + AGI+V+
Sbjct: 374 ------------------------LEDDLEFLGLITFEDPLRPDAKETIEELKAAGIKVV 409
Query: 646 VITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705
+ITGDN TA+AI +++ + VF+R
Sbjct: 410 MITGDNVLTAKAIAKELGID----------------------------------VFARVS 435
Query: 706 PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDN 765
P K +IV L++ G +VAMTGDGVNDAPALK AD+G+AMG AK A+D+VL DD+
Sbjct: 436 PEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDD 489
Query: 766 FGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVT 825
+IV AV EGR I++N+K+ I + I+ N+ + L + L+
Sbjct: 490 LSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIV--------------IILLL 535
Query: 826 DGPPATAL 833
A AL
Sbjct: 536 PMLAALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 232 bits (593), Expect = 3e-64
Identities = 118/354 (33%), Positives = 186/354 (52%), Gaps = 48/354 (13%)
Query: 27 GLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSD 86
GL+S E +KR +YG NEL EK L F + L ++ AA I+ L
Sbjct: 1 GLTSAEAKKRLAKYGPNEL-PEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIAL------- 52
Query: 87 SGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDL 146
E++V+ ++I+ +L+LNA +G +E+ A A+EALK+ +VLRDG ++
Sbjct: 53 ------ENWVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQ-EI 105
Query: 147 PAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCE 206
PA LVPGD+V L +GD VPAD R+ + ++V+Q++LTGE++P+ K T
Sbjct: 106 PASELVPGDVVRLKIGDIVPADCRL--FEGDYIQVDQAALTGESLPVTKKTG-------- 155
Query: 207 LQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGN 266
++ ++G+TV G +V TGMNT GK + S E L+K L + G
Sbjct: 156 -----DIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALV--QSTETGSGHLQKILSKIGL 208
Query: 267 RLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGL 326
L IG++ L+ ++ + E + A+ L V IP +
Sbjct: 209 FLIVLIGVLVLIELVVLFFGRG----------------ESFREGLQFALVLLVGGIPIAM 252
Query: 327 PAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTE 380
PAV++ +A+G ++A+K AIV +L ++E L ++CSDKTGTLT N++S+ E
Sbjct: 253 PAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDE 306
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 202 bits (516), Expect = 3e-59
Identities = 86/258 (33%), Positives = 143/258 (55%), Gaps = 37/258 (14%)
Query: 100 VIVLILVLNAIVGVWQESNAEKALEALKKIQCESG-KVLRDGYLVPDLPAIGLVPGDIVE 158
+I+L++++NA++ +QE A KAL+ALKK+ + V+RDG ++PA LV GDIV
Sbjct: 1 IILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEE-EIPADELVVGDIVL 59
Query: 159 LGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGT 218
L GD+VPAD R+ SL V++S+LTGE++P+ K + + VFAGT
Sbjct: 60 LKPGDRVPADGRI---IEGSLEVDESALTGESLPVEKS-------------RGDTVFAGT 103
Query: 219 TVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLV 278
V++G IV TG +TE+GKI + + +A + + TPL++ LD+ L + + ++
Sbjct: 104 VVLSGELKVIVTATGEDTELGKIARLVEEA--KSAKTPLQRLLDKLAKILVPIVLALAIL 161
Query: 279 VWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGT 338
V+++ + + A+A+ VAA PE LP + LA+G
Sbjct: 162 VFLIWFFRGGDF-----------------LEALLRALAVLVAACPEALPLAVPLALAVGA 204
Query: 339 RKMAQKNAIVRKLPSVET 356
++A+K +V+ L ++ET
Sbjct: 205 GRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 206 bits (526), Expect = 5e-57
Identities = 94/318 (29%), Positives = 155/318 (48%), Gaps = 30/318 (9%)
Query: 100 VIVLILVLNAIVGVWQESNAEKALEALKKIQ--CESGKVLRDGYLVPDLPAIGLVPGDIV 157
I+ ++++ ++ V Q+ AE L +L VLR+G+ +PA LVPGD+V
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGWKE--IPAKDLVPGDVV 58
Query: 158 ELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAG 217
+ G+ VPAD + + S V++S+LTGE+ P+LK + ++VFAG
Sbjct: 59 LVKSGETVPADGVLLS---GSCFVDESNLTGESNPVLKTALK---ETQSGTITGDLVFAG 112
Query: 218 TTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNR-LTTAIGLVC 276
T V G+ + +V TG+ T +G+I + + E+ TPL+ K D N + L+
Sbjct: 113 TYVFGGTLIVVVTPTGILTTVGRIAVVV--KTGFETRTPLQSKRDRLENFIFILFLLLLA 170
Query: 277 LVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLAL 336
L V++ + WD + A A+ + V +P LPA +T LA+
Sbjct: 171 LAVFLYLFIRG--WDPNSIFKA------------LLRALIVLVIVVPPALPAAVTVALAV 216
Query: 337 GTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFH- 395
G ++A+K +VR L ++E LG +CSDKTGTLT N+M++ + G K S
Sbjct: 217 GDARLAKKGILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDNSSSLVA 276
Query: 396 --VEGTTYDPKDGGIVDW 411
+ DP + ++
Sbjct: 277 CDNNYLSGDPMEKALLKS 294
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 191 bits (487), Expect = 5e-50
Identities = 112/355 (31%), Positives = 185/355 (52%), Gaps = 35/355 (9%)
Query: 498 RSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPC 557
R +++ + FD R+ MSV+V E T H+QL+ KG++E +L S V+ G +VPLD+
Sbjct: 440 RWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHN-GEIVPLDDI- 497
Query: 558 WQLMLSRHL--EMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTI-ESDL 614
L + + ++ +GLR + +A K PA + Y ESDL
Sbjct: 498 -MLRRIKRVTDTLNRQGLRVVAVATKY------------LPARE-----GDYQRADESDL 539
Query: 615 VFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGR 674
+ G + DPP+ A+ + +G+ V ++TGD++ A +C ++ L +G
Sbjct: 540 ILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAG------E 593
Query: 675 SFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAP 734
G + LS + + +F+R P HK+ IV +LK G VV GDG+NDAP
Sbjct: 594 VLIGSDIETLSDDELANLAERT--TLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAP 651
Query: 735 ALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSN 794
AL+ ADIG+++ ++A+EA+D++L + + + V EGR + NM +I+ SSN
Sbjct: 652 ALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSN 710
Query: 795 VGEVISIFLTAALGIPEC-LIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPR 848
G V S+ + +A +P ++P+ LL NL+ D A+ F+ D + +QKP R
Sbjct: 711 FGNVFSVLVASAF-LPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQR 763
|
Length = 902 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 181 bits (460), Expect = 8e-47
Identities = 111/388 (28%), Positives = 190/388 (48%), Gaps = 37/388 (9%)
Query: 498 RSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPC 557
R K+V + FD R+ +SV+V +L+ KG+VE +L +H + G+VV L E
Sbjct: 405 RWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRF-GGAVVTLSESE 463
Query: 558 WQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFV 617
+ EM+ +G+R + +A K +D+ E L+
Sbjct: 464 KSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTD----------------EEQLIIE 507
Query: 618 GVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFT 677
G +G DPP+ +AI GI V V+TGDN+ IC+++ + + +
Sbjct: 508 GFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAND------FLL 561
Query: 678 GKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALK 737
G + LS + L K+ +F+R P K I+ +LK+ G V GDG+NDAPAL+
Sbjct: 562 GADIEELSDEELARELRKY--HIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALR 619
Query: 738 LADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGE 797
AD+G+++ T ++AKEASD++L + + + V EGR+ + N+ +++ SSN G
Sbjct: 620 KADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGN 678
Query: 798 VISIFLTAALGIPEC-LIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKIDDALIN 856
V S+ + +A IP ++ + LL NL+ D L ++ D + ++KP +
Sbjct: 679 VFSVLVASAF-IPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQ------WE 730
Query: 857 SWVLLRYLV-IGSYVGIATVGIFVL-WY 882
+ R+++ IG I + F+L W+
Sbjct: 731 QKGMGRFMLCIGPVSSIFDIATFLLMWF 758
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|216063 pfam00689, Cation_ATPase_C, Cation transporting ATPase, C-terminus | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 2e-45
Identities = 73/225 (32%), Positives = 108/225 (48%), Gaps = 53/225 (23%)
Query: 813 LIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGI 872
L P+Q+LW+NLVTDG PA ALGF P + D+M++PPRK + L + +L R L+ G + I
Sbjct: 4 LTPIQILWINLVTDGLPALALGFEPPEPDLMKRPPRKPKEPLFSRKLLRRILLQGLLIAI 63
Query: 873 ATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITF 932
T+ +F L GI+ G T+
Sbjct: 64 VTLLVFFLGL---LGFGISESGLAQTM--------------------------------- 87
Query: 933 SNPCDYFTIGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLG 992
F LV ++FN+LNA S SL + + N LL+A+ +SL
Sbjct: 88 -----AFN------------TLVLSQLFNALNARSLRRSLFKIGLFSNKLLLLAVLLSLL 130
Query: 993 LHCLILYVPFLADVFGVVPLNLNEWFLVILVSAPVILIDEVLKFV 1037
L LI+YVP L VFG PL+L +W +V+ ++ V+L+ E+ K +
Sbjct: 131 LQLLIIYVPGLQAVFGTTPLSLEQWLIVLGLALVVLLVVELRKLL 175
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices. Length = 175 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 175 bits (446), Expect = 4e-45
Identities = 108/387 (27%), Positives = 191/387 (49%), Gaps = 42/387 (10%)
Query: 14 EQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAA 73
E L++ V + GL++ EV +R +G N+ +EK P +L++ F++ + IL +
Sbjct: 21 ETLLRKLGV-HETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLM 79
Query: 74 FISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCES 133
+S++ +D ++I L+++ + ++G QES AE+A ALK + +
Sbjct: 80 GVSYLT-------------DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNT 126
Query: 134 GKVLRDGY-----LVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTG 188
VLR + ++P LVPGD++EL GD +PAD RV + L + QS+LTG
Sbjct: 127 ATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARV--ISARDLFINQSALTG 184
Query: 189 EAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDA 248
E++P+ K D E+ +EN+ F GT V++G +V+ TG +T G +
Sbjct: 185 ESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAA--- 241
Query: 249 SLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCT 308
+ T K + L + ++ VV ++N W A
Sbjct: 242 TERRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKGDW-----LEA---------- 286
Query: 309 YYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKT 368
F A+A+AV PE LP ++++ LA G M++K IV++L +++ G ++C+DKT
Sbjct: 287 --FLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKT 344
Query: 369 GTLTTNQMSVTEFFTLGRKTTISRIFH 395
GTLT +++ + + +T+ R+
Sbjct: 345 GTLTQDKIELEKHIDSSGETS-ERVLK 370
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 162 bits (413), Expect = 1e-40
Identities = 203/931 (21%), Positives = 339/931 (36%), Gaps = 192/931 (20%)
Query: 27 GLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSD 86
GL++ ++ +R+ +YG NE++ +L+ E+ + V S IL
Sbjct: 139 GLTTGDIAQRKAKYGKNEIEIPV-PSFLELLKEEV----LHPFYVFQVFSVILWLLD--- 190
Query: 87 SGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDL 146
E Y L IV + + + V+Q + L + S V+R+G V +
Sbjct: 191 ------EYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVHKPQ-SVIVIRNGKWVT-I 242
Query: 147 PAIGLVPGDIVELGV--GDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDD 204
+ LVPGDIV + +P D L + S V +S LTGE++P+LK P DD
Sbjct: 243 ASDELVPGDIVSIPRPEEKTMPCDS---VLLSGSCIVNESMLTGESVPVLKFPIPDNGDD 299
Query: 205 CE-LQAKE----NMVFAGTTVV-------NGSCVCIVINTGMNTEIGKIQKQIHDASLEE 252
E L E +++F GT ++ + C+ IV+ TG +T G++ + I L
Sbjct: 300 DEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSI----LYP 355
Query: 253 SDTPLRKKLDEFGNRLTTAIGLVC--LVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYY 310
+ D F L A+ + + I ++ + +
Sbjct: 356 KPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKD----------GRPLGKIILRSLDI 405
Query: 311 FKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLP-SVETLGCTTVICSDKTG 369
I V P LPA ++ + ++ K I P + G V C DKTG
Sbjct: 406 ITIVV-------PPALPAELSIGINNSLARLK-KKGIFCTSPFRINFAGKIDVCCFDKTG 457
Query: 370 TLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAV 429
TLT + + + G V+G + + + IV + K A
Sbjct: 458 TLTEDGLDL-----RG----------VQGLSGNQEFLKIVTEDSSLKPSIT---HKALAT 499
Query: 430 CNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRL 489
C+ + +G L G P + K + E G+ + T + A D L
Sbjct: 500 CH-SLTKLEGKL---VGDPLD---KKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQEL 552
Query: 490 GCCEWWTKRSKRVATLEFDRIRKSMSVIVREPT-GHNQLLVKGSVESLLERSSHVQLADG 548
+ +F + MSVIV VKG+ E++ S
Sbjct: 553 SI----------IRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPET---- 598
Query: 549 SVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYS 608
VP D Q +L + +G R L +AYK EL +K D S
Sbjct: 599 --VPSDY---QEVLKS---YTREGYRVLALAYK-ELP---------KLTLQKAQDLS-RD 639
Query: 609 TIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTA-------EAICRQ 661
+ES+L F+G + +P + + I + + A I ++ITGDN TA +
Sbjct: 640 AVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPS 699
Query: 662 IKLFSGNEDLTGRS------------------------------------------FTGK 679
L + +GK
Sbjct: 700 NTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGK 759
Query: 680 EFMAL--SSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALK 737
F L S + + L H VF+R P K+ +V +L+++ V M GDG ND ALK
Sbjct: 760 AFAVLQAHSPELLLRLLSH-TTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALK 818
Query: 738 LADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVA-------EGRSIYNNMKAFIRYM 790
AD+G+++ EAS F S +++++ EGR +YM
Sbjct: 819 QADVGISL------SEAEAS----VAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYM 868
Query: 791 ISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKI 850
++ + S+ + +G L Q L ++L+ P A + N + ++ P
Sbjct: 869 ALYSLIQFYSVSILYLIGSN--LGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERP--- 923
Query: 851 DDALINSWVLLRYLVIGSYVGIATVGIFVLW 881
L + ++L ++I + I + V
Sbjct: 924 PSNLFSVYILTS-VLIQFVLHILSQVYLVFE 953
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 159 bits (405), Expect = 7e-40
Identities = 110/354 (31%), Positives = 181/354 (51%), Gaps = 30/354 (8%)
Query: 500 KRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQ 559
++V L FD +R+ +SV+V + G + L+ KG+VE +L ++HV+ +V PLDE +
Sbjct: 440 RKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVR-DGDTVRPLDEARRE 498
Query: 560 LMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTI-ESDLVFVG 618
+L+ ++ G R L +A + E+ YST E DLV G
Sbjct: 499 RLLALAEAYNADGFRVLLVATR-EIPG----GESRAQ----------YSTADERDLVIRG 543
Query: 619 VVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTG 678
+ DPP+ AI R G+ V V+TGDN ICR++ L G E L G
Sbjct: 544 FLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPG-EPLLGT---- 598
Query: 679 KEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKL 738
E A+ + + VF++ P K +++ L+ G V GDG+NDAPAL+
Sbjct: 599 -EIEAMDDAA-LAREVEER-TVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRD 655
Query: 739 ADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEV 798
AD+G+++ +G ++AKE++D++L + + + V +GR + N+ ++ SSN G V
Sbjct: 656 ADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNV 714
Query: 799 ISIFLTAALGIP-ECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKID 851
S+ L A+ IP ++ + LL NL+ D +L ++ D + ++K PRK D
Sbjct: 715 FSV-LVASAFIPFLPMLAIHLLLQNLMYD-ISQLSLPWDKMDKEFLRK-PRKWD 765
|
Length = 903 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 157 bits (400), Expect = 3e-39
Identities = 103/359 (28%), Positives = 176/359 (49%), Gaps = 55/359 (15%)
Query: 27 GLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSD 86
GL+ EVE RE++G NEL +K P W + + + +L + IS+
Sbjct: 67 GLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYAT------- 119
Query: 87 SGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPD- 145
ED VI L++ ++ ++ QE+ + KA +ALK + + VLR +
Sbjct: 120 ------EDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGEN 173
Query: 146 ----LPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILK------ 195
+P LVPGDI++L GD +PAD+R+ L+ L V Q+SLTGE++P+ K
Sbjct: 174 GWLEIPIDQLVPGDIIKLAAGDMIPADLRI--LQARDLFVAQASLTGESLPVEKFATTRQ 231
Query: 196 --GTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEES 253
++P+ D + F GT VV+G+ +VI TG NT G++ ++ + +
Sbjct: 232 PEHSNPLECD--------TLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRV--SEQDSE 281
Query: 254 DTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKI 313
++ + L + ++ VV ++N + D W A
Sbjct: 282 PNAFQQGISRVSWLLIRFMLVMAPVVLLIN-----GYTKGDWWEA------------ALF 324
Query: 314 AVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLT 372
A+++AV PE LP ++T+ LA G K++++ IV++L +++ G ++C+DKTGTLT
Sbjct: 325 ALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLT 383
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 149 bits (377), Expect = 2e-36
Identities = 115/390 (29%), Positives = 186/390 (47%), Gaps = 70/390 (17%)
Query: 13 VEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVA 72
+E+ L N GL+ + +R +RYG NE+ EK +L+ F++ + +L+V
Sbjct: 32 LEETLANLNTHRQ-GLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVL 90
Query: 73 AFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCE 132
A ISF Y+ G+ D ++I+ +++L+ ++ WQE + KA EALK +
Sbjct: 91 AAISFFTDYWLPLRRGEE--TDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRT 148
Query: 133 SGKVLRDGY-----LVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLT 187
+ VLR G+ + ++P LVPGDIV L GD +PAD+R+ +++ L + Q+ LT
Sbjct: 149 TATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRL--IESRDLFISQAVLT 206
Query: 188 GEAMPI----------LKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTE 237
GEA+P+ K + D+ L N+ F GT VV+G+ +V+ TG T
Sbjct: 207 GEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTY 266
Query: 238 IGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIG--------------LVCL-VVWIM 282
G + K I G R TA LV + VV ++
Sbjct: 267 FGSLAKSI------------------VGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLI 308
Query: 283 NYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMA 342
N F D ++ A+A+AV PE LP ++++ LA G MA
Sbjct: 309 N--GFTKGDWLEA---------------LLFALAVAVGLTPEMLPMIVSSNLAKGAIAMA 351
Query: 343 QKNAIVRKLPSVETLGCTTVICSDKTGTLT 372
++ +V++L +++ G V+C+DKTGTLT
Sbjct: 352 RRKVVVKRLNAIQNFGAMDVLCTDKTGTLT 381
|
Length = 903 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 138 bits (349), Expect = 2e-33
Identities = 90/324 (27%), Positives = 148/324 (45%), Gaps = 58/324 (17%)
Query: 567 EMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPP 626
E++S+G R LG+A DE G + F+G++ L DPP
Sbjct: 411 ELASRGYRALGVARTDEEGRWH---------------------------FLGLLPLFDPP 443
Query: 627 RGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGK---EFMA 683
R + I+ R G+EV ++TGD+ + A+ R++ L G T + +
Sbjct: 444 RHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGL--GTNIYTADVLLKGDNRDDLP 501
Query: 684 LSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743
+ +E G F+ P HK EIV +L++ G +V MTGDGVNDAPALK AD+G+
Sbjct: 502 SGLGEMVE---DADG--FAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGI 556
Query: 744 AMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFL 803
A+ T+ A+ A+D+VL + IV A+ E R I+ MK+++ Y I+ + V L
Sbjct: 557 AVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGL 615
Query: 804 TAAL---GIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVL 860
+ P P+ ++ + ++ DG T + ++ KP + W L
Sbjct: 616 LILILNFYFP----PIMVVIIAILNDGTIMT-IAYDNV------KPSKLPQ-----RWNL 659
Query: 861 LRYLVIGSYVGI-ATVGIFVLWYT 883
+ + +GI + F+L
Sbjct: 660 REVFTMSTVLGIYLVISTFLLLAI 683
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 135 bits (341), Expect = 2e-32
Identities = 63/169 (37%), Positives = 89/169 (52%), Gaps = 34/169 (20%)
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRS 675
VGV+ L D R +AI + GI+V+++TGDN+ TAEAI +++ +
Sbjct: 528 LVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI----------- 576
Query: 676 FTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPA 735
E A E L P K EIVR L+ G VAM GDG+NDAPA
Sbjct: 577 ---DEVRA-------ELL------------PEDKAEIVRELQAEGRKVAMVGDGINDAPA 614
Query: 736 LKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMK 784
L AD+G+AMG +GT+VA EA+D+VL D+ ++ A+ R+ +K
Sbjct: 615 LAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIK 662
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 120 bits (304), Expect = 3e-28
Identities = 71/317 (22%), Positives = 136/317 (42%), Gaps = 48/317 (15%)
Query: 69 LLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKK 128
LL+A ++ I AY +E +++ + +L + + A AL AL
Sbjct: 3 LLMA--LATIAAYAMG---------LVLEGALLLFLFLLGETLEERAKGRASDALSALLA 51
Query: 129 IQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTG 188
+ + +VL+ ++P L GDIV + G+++P D V + S V++S+LTG
Sbjct: 52 LAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVV--ISGESE-VDESALTG 108
Query: 189 EAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDA 248
E+MP+ K + + VFAGT +GS V G ++ + +I + + +A
Sbjct: 109 ESMPVEK-------------KEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEA 155
Query: 249 SLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCT 308
+ S P+++ D + A+ + L+ ++ W + + +
Sbjct: 156 --QSSKAPIQRLADRIASYYVPAVLAIALLTFV-------VWLALGAL-----GALYR-- 199
Query: 309 YYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKT 368
A+A+ V A P L + + A++ +++ ++E L + DKT
Sbjct: 200 -----ALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKT 254
Query: 369 GTLTTNQMSVTEFFTLG 385
GTLTT + +V + L
Sbjct: 255 GTLTTGKPTVVDIEPLD 271
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 118 bits (299), Expect = 1e-27
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 42/207 (20%)
Query: 610 IESDLVFVGVVGLRDPPRGGVDKAIDDCRGAG-IEVMVITGDNKSTAEAICRQIKLFSGN 668
+ D +GV+ LRD R +AI + AG I+++++TGDN+S AEA+ ++ G
Sbjct: 369 VAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAEL----GI 424
Query: 669 EDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGD 728
++ V + P K IV+ L+E G VVAM GD
Sbjct: 425 DE-----------------------------VHAELLPEDKLAIVKELQEEGGVVAMVGD 455
Query: 729 GVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMK---- 784
G+NDAPAL AD+G+AMG G++VA EA+D+VL +D+ S+ +A+ R +K
Sbjct: 456 GINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLA 514
Query: 785 ---AFIRYMISSNVGEVISIFLTAALG 808
+ I G ++ ++L A L
Sbjct: 515 WALGYNLVAIPLAAGGLLPLWLLAVLL 541
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 2e-26
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 34/168 (20%)
Query: 617 VGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSF 676
GV+ L D + + I + GIE +++TGDN+ TA+A+ +++ G E+
Sbjct: 406 AGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL----GIEN------ 455
Query: 677 TGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPAL 736
V + P K +++ L+E G+VVAM GDG+NDAPAL
Sbjct: 456 -----------------------VRAEVLPDDKAALIKKLQEKGKVVAMVGDGINDAPAL 492
Query: 737 KLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMK 784
AD+G+A+G GT+VA EA+D+VL ++ + +A+ R +K
Sbjct: 493 AQADVGIAIG-AGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIK 539
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 5e-26
Identities = 139/491 (28%), Positives = 199/491 (40%), Gaps = 107/491 (21%)
Query: 346 AIVRKLPSVETLGCTTVICSDKTGTLTTNQM----------SVTEFFT---------LGR 386
A VR E LG I SDKTGTLT N M S + FT LG
Sbjct: 345 ASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGS 404
Query: 387 KTTISRIFHVEGTTYDPKDGGIVD--WPCYNMDANLQAMAKICAVCNDA--GVYCDGPL- 441
VE + D +VD + A+C+ DGP
Sbjct: 405 YVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEE 464
Query: 442 --FRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRS 499
++A P EAAL +GF T + + LI+ TK
Sbjct: 465 ITYQAAS-PDEAALVKAARDVGF------VFFERTPKSISLLIEMHGE--------TKEY 509
Query: 500 KRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQ 559
+ + LEF+ RK MSVIVR P G +LL KG+ + +R L+ G +E
Sbjct: 510 EILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKR-----LSSGGNQVNEE---- 560
Query: 560 LMLSRHLE-MSSKGLRCLGMAYKD----ELGEFSDYYSESHPA---HKKLLDPSCYSTIE 611
HLE +S+GLR L +AY++ E E+++ Y+E+ A ++ LD +IE
Sbjct: 561 --TKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLD-VVAESIE 617
Query: 612 SDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAI---CR-------Q 661
DL+ +G + D + GV + I+ R AGI++ V+TGD TA I CR Q
Sbjct: 618 KDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQ 677
Query: 662 IKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHG-------GKVFS------------ 702
I + S + D T +F ++++ L G GK
Sbjct: 678 IVITSDSLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFL 737
Query: 703 ------------RAEPRHKQEIVRMLKEM-GEVVAMTGDGVNDAPALKLADIGVAMGITG 749
R P K ++VR++K+ G+ GDG ND ++ AD+GV GI+G
Sbjct: 738 QLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGV--GISG 795
Query: 750 TE--VAKEASD 758
E A ASD
Sbjct: 796 KEGMQAVMASD 806
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 7e-25
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 44/196 (22%)
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIE-VMVITGDNKSTAEAICRQIKLFSGNEDLTGR 674
++G + L D PR +AI + + GIE V+++TGD ++ AE + R++ G ++
Sbjct: 353 YLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVAREL----GIDE---- 404
Query: 675 SFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAP 734
V + P K EIV+ L+E VAM GDG+NDAP
Sbjct: 405 -------------------------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAP 439
Query: 735 ALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSN 794
AL AD+G+AMG +G++VA E +D+VL +D+ + A+ R R ++ N
Sbjct: 440 ALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARR--------TRRIVKQN 491
Query: 795 VGEVISIFLTAALGIP 810
V VI++ + L +
Sbjct: 492 V--VIALGIILLLILL 505
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 1e-24
Identities = 78/337 (23%), Positives = 141/337 (41%), Gaps = 60/337 (17%)
Query: 62 DDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE- 120
DTL+ + A+ ++A + + + +++ +L +G W E A+
Sbjct: 20 MDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFIL---LGRWLEMLAKG 76
Query: 121 ---KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTS 177
AL L K+Q + +L D + ++P L PGDIV + G+K+P D V ++
Sbjct: 77 RASDALSKLAKLQPSTATLLTDDGEIEEVPVELLQPGDIVRVLPGEKIPVDGTV--IEGE 134
Query: 178 SLRVEQSSLTGEAMPILK--GTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMN 235
S V++S +TGE++P+ K G V AGT GS V TG +
Sbjct: 135 S-EVDESLVTGESLPVPKKVGDP---------------VIAGTVNGTGSLVVRATATGED 178
Query: 236 TEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTT-------AIGLVCLVVWIMNYRNFL 288
T + +I + + A ++ + +++ AI L+ V+W++
Sbjct: 179 TTLAQIVRLVRQAQQSKA------PIQRLADKVAGYFVPVVIAIALITFVIWLI------ 226
Query: 289 SWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIV 348
A+ F+ E +AV + + A P L T +A+ T A+ ++
Sbjct: 227 -------LGADFVFALE-------VAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLI 272
Query: 349 RKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLG 385
+ ++E + DKTGTLT + +VT+ G
Sbjct: 273 KDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFG 309
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 9e-24
Identities = 79/331 (23%), Positives = 137/331 (41%), Gaps = 58/331 (17%)
Query: 63 DTLVKI-LLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQE----S 117
DTLV + + A S F Y E +++ L L +G + E
Sbjct: 150 DTLVALATIGAYAYSLYATLFP----------VYFEEAAMLIFLFL---LGRYLEARAKG 196
Query: 118 NAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTS 177
A +A+ AL + ++ V+R ++P + GDIV + G+++P D V + S
Sbjct: 197 RARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVV--VSGS 254
Query: 178 SLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTE 237
S V++S LTGE++P+ K + VFAGT ++GS V G +T
Sbjct: 255 SS-VDESMLTGESLPVEKK-------------PGDEVFAGTVNLDGSLTIRVTRVGADTT 300
Query: 238 IGKIQKQIHDASLEESDTPLRKKLDEFGNRLT-TAIGLVCLVVWIMNYRNFLSWDVVDGW 296
+ +I + + +A + S P+++ D + + + L F W + G
Sbjct: 301 LARIIRLVEEA--QSSKAPIQRLADRVASYFVPVVLVIAALT--------FALWPLFGGG 350
Query: 297 PANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLAL--GTRKMAQKNAIVRKLPSV 354
A+A+ V A P L + T A+ G + A++ +++ ++
Sbjct: 351 DWE---------TALYRALAVLVIACPCAL--GLATPTAILVGIGRAARRGILIKGGEAL 399
Query: 355 ETLGCTTVICSDKTGTLTTNQMSVTEFFTLG 385
E L + DKTGTLT + VT+ L
Sbjct: 400 ERLAKVDTVVFDKTGTLTEGKPEVTDVVALD 430
|
Length = 713 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 1e-22
Identities = 68/293 (23%), Positives = 130/293 (44%), Gaps = 41/293 (13%)
Query: 94 DYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVP 153
+Y+E +++L+ + + + A +AL+AL ++ ++ +VLR G L ++ L
Sbjct: 17 EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLE-EVAVEELKV 75
Query: 154 GDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENM 213
GD+V + G++VP D V + ++ V++S+LTGE++P+ K A +
Sbjct: 76 GDVVVVKPGERVPVDGVVLSGTST---VDESALTGESVPVEK-------------APGDE 119
Query: 214 VFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIG 273
VFAG ++G +V ++ I KI + +A + ++ +D F T +
Sbjct: 120 VFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEA--QSRKAKTQRFIDRFARYYTPVVL 177
Query: 274 LVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTC 333
+ L +W+ V ++ ++ A+ L V A P L VI+
Sbjct: 178 AIALAIWL------------------VPGLLKRWPFWVYRALVLLVVASPCAL--VISAP 217
Query: 334 LAL--GTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTL 384
A A+ +++ ++E L + DKTGTLTT + V +
Sbjct: 218 AAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA 270
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 90.3 bits (225), Expect = 4e-22
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 8 AWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVK 67
+ +VE+ L L+KGL+ E E+R E+YG NEL ++K K LW++ L QF D LV
Sbjct: 1 WHTLSVEEVLARLGTDLEKGLTEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVI 60
Query: 68 ILLVAAFIS 76
ILL+AA +S
Sbjct: 61 ILLIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 85.7 bits (213), Expect = 2e-20
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 9 WSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKI 68
+ ++E+ L+ L+KGLSS E +R ERYG NEL K L QF + L+ I
Sbjct: 5 HALSLEEVLERLQTDLEKGLSSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNPLIYI 64
Query: 69 LLVAAFISFIL 79
LL AA +S +L
Sbjct: 65 LLAAAVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 95.8 bits (239), Expect = 4e-20
Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 34/151 (22%)
Query: 615 VFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGR 674
+GV+ L+D + G+ + + R GI+ ++ITGDN TA AI + +
Sbjct: 437 RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV---------- 486
Query: 675 SFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAP 734
+F+A A P K ++R + G +VAMTGDG NDAP
Sbjct: 487 ----DDFIA-------------------EATPEDKLALIRQEQAEGRLVAMTGDGTNDAP 523
Query: 735 ALKLADIGVAMGITGTEVAKEASDMVLADDN 765
AL AD+GVAM +GT+ AKEA++MV D N
Sbjct: 524 ALAQADVGVAMN-SGTQAAKEAANMVDLDSN 553
|
Length = 681 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 84.2 bits (209), Expect = 1e-19
Identities = 34/119 (28%), Positives = 45/119 (37%), Gaps = 31/119 (26%)
Query: 428 AVCNDAGVYC--DGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSS 485
A+CNDA + G PTE+AL V EK+G
Sbjct: 1 ALCNDAKFGENEEKNGGEIIGDPTESALLVFAEKLG------------------------ 36
Query: 486 TVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLL-VKGSVESLLERSSHV 543
E R RVA + F+ RK MS + + L VKG+ E +LER S +
Sbjct: 37 ----IDVEELRARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAPERILERCSTI 91
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 93.0 bits (231), Expect = 3e-19
Identities = 61/184 (33%), Positives = 95/184 (51%), Gaps = 34/184 (18%)
Query: 618 GVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFT 677
GV+ L+D +GG+ + R GI+ ++ITGDN+ TA AI + +G +D
Sbjct: 439 GVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE----AGVDD------- 487
Query: 678 GKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALK 737
F+A A P K ++R + G++VAMTGDG NDAPAL
Sbjct: 488 ---FIA-------------------EATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALA 525
Query: 738 LADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGE 797
AD+GVAM +GT+ AKEA++MV D + ++ V G+ + A + I+++V +
Sbjct: 526 QADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAK 584
Query: 798 VISI 801
+I
Sbjct: 585 YFAI 588
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 92.2 bits (230), Expect = 5e-19
Identities = 55/150 (36%), Positives = 77/150 (51%), Gaps = 34/150 (22%)
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRS 675
+GV+ L+D + G+ + + R GI+ ++ITGDN TA AI + +G +D
Sbjct: 436 VLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE----AGVDD----- 486
Query: 676 FTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPA 735
F+A A P K ++R + G +VAMTGDG NDAPA
Sbjct: 487 -----FLA-------------------EATPEDKLALIRQEQAEGRLVAMTGDGTNDAPA 522
Query: 736 LKLADIGVAMGITGTEVAKEASDMVLADDN 765
L AD+GVAM +GT+ AKEA +MV D N
Sbjct: 523 LAQADVGVAMN-SGTQAAKEAGNMVDLDSN 551
|
Length = 679 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 82.5 bits (204), Expect = 6e-16
Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 45/194 (23%)
Query: 617 VGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSF 676
++ +RDP R A+ AG ++++TGDN +TA AI ++ +G +
Sbjct: 642 AALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKE----AGID------- 690
Query: 677 TGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPAL 736
+V + P K E ++ L+ G VAM GDG+NDAPAL
Sbjct: 691 ----------------------EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPAL 728
Query: 737 KLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVG 796
AD+G+AMG G++VA E + + L + + A+A R+ NMK
Sbjct: 729 AQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQ----------- 776
Query: 797 EVISIFLTAALGIP 810
++ F+ +LGIP
Sbjct: 777 NLLGAFIYNSLGIP 790
|
Length = 834 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 81.3 bits (200), Expect = 1e-15
Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 34/188 (18%)
Query: 615 VFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGR 674
+GV+ L+D + G+ + + R GIE ++ TGDN+ TA I ++ +
Sbjct: 431 EILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV---------- 480
Query: 675 SFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAP 734
+ + +P K ++R + G +VAMTGDG NDAP
Sbjct: 481 -----------------------DRFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAP 517
Query: 735 ALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSN 794
AL A++G+AM +GT AKEA++++ D N ++ V G+ + + + I+++
Sbjct: 518 ALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIAND 576
Query: 795 VGEVISIF 802
+ + +I
Sbjct: 577 IAKYFAIL 584
|
Length = 673 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 80.0 bits (198), Expect = 3e-15
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 60/227 (26%)
Query: 613 DLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLT 672
+ +G++ L+D R +AI + + GI+ +++TGDN A AI ++
Sbjct: 556 NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGEL---------- 605
Query: 673 GRSFTGKEFMA--LSS--TQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGD 728
G +F A L + + L++H +AM GD
Sbjct: 606 -----GIDFRAGLLPEDKVKAVTELNQH------------------------APLAMVGD 636
Query: 729 GVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIR 788
G+NDAPA+K A IG+AMG +GT+VA E +D L + + + R+ + N IR
Sbjct: 637 GINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHAN----IR 691
Query: 789 YMISSNVGEVISIFL-TAALGIPECLIPVQLLWVNLVTD-GPPATAL 833
I+ +G + +IFL T LGI LW+ ++ D G ATAL
Sbjct: 692 QNITIALG-LKAIFLVTTLLGITG-------LWLAVLADSG--ATAL 728
|
Length = 741 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 77.7 bits (192), Expect = 2e-14
Identities = 75/276 (27%), Positives = 121/276 (43%), Gaps = 45/276 (16%)
Query: 114 WQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAA 173
+ S A + + AL + E+ LRDG ++ L PGD++E+ G ++PAD
Sbjct: 225 YAASRARRGVSALMALVPETATRLRDGERE-EVAIADLRPGDVIEVAAGGRLPAD---GK 280
Query: 174 LKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTG 233
L + ++S+LTGE++P+ E E V AG T V+ V++
Sbjct: 281 LLSPFASFDESALTGESIPV------------ERATGEK-VPAGATSVDRLVTLEVLSEP 327
Query: 234 MNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFL-SWDV 292
+ I +I I +A EE P+ + +D F T AI LV L+V ++ F W
Sbjct: 328 GASAIDRILHLIEEA--EERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAAPWQ- 384
Query: 293 VDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGL----PAVITTCLALGTRKMAQKNAIV 348
+ ++ + L + P L PA IT+ LA R + A++
Sbjct: 385 ---------------EWIYR-GLTLLLIGCPCALVISTPAAITSGLAAAAR----RGALI 424
Query: 349 RKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTL 384
+ ++E LG T + DKTGTLT + VT+
Sbjct: 425 KGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPA 460
|
Length = 741 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 75.3 bits (185), Expect = 1e-13
Identities = 91/359 (25%), Positives = 144/359 (40%), Gaps = 78/359 (21%)
Query: 506 EFDRIRKSMSVIVREPTGHNQLLVKG---SVESLLERSSHVQLADGSVVPLDEPCWQLML 562
EFD RK MSVI+ P ++ VKG S+ S+++RS ++ + +
Sbjct: 610 EFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRAT------------- 656
Query: 563 SRHLE-MSSKGLRCLGMAYKDELG-EFSDYYSESHPAHKKLLDPSCY-----STIESDLV 615
HL SS GLR L + ++ EF ++ A L+ + S +E++L
Sbjct: 657 EAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLT 716
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAI----------CRQIKLF 665
+G + D + GV +AI+ R AGI+V V+TGD + TA +I QI +
Sbjct: 717 ILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIIN 776
Query: 666 SGNEDLTGRSF-----TGKEFMALSSTQQ------------------------------- 689
S +++ +S K+ +S Q
Sbjct: 777 SNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELE 836
Query: 690 ---IEALSKHGGKVFSRAEPRHKQEIVRMLKE-MGEVVAMTGDGVNDAPALKLADIGVAM 745
+ SK + R P K IV ++K ++ GDG ND +++AD+GV
Sbjct: 837 EQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGV-- 894
Query: 746 GITGTE--VAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIF 802
GI+G E A ASD + F + + G Y M I Y N V+ +F
Sbjct: 895 GISGQEGRQAVMASDFAMGQFRF-LVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLF 952
|
Length = 1178 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 66.5 bits (162), Expect = 2e-12
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 22/132 (16%)
Query: 609 TIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGN 668
DLV +G++ L DP G +A+ + + AGI++ ++TGDN+ TA AI R + LF
Sbjct: 78 VAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLF--- 134
Query: 669 EDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGD 728
+ + + + + K K+F + + L E V M GD
Sbjct: 135 -----------DALVSADLYGLVGVGKPDPKIF--------ELALEELGVKPEEVLMVGD 175
Query: 729 GVNDAPALKLAD 740
GVND PA K A
Sbjct: 176 GVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 68.4 bits (167), Expect = 1e-11
Identities = 76/323 (23%), Positives = 126/323 (39%), Gaps = 40/323 (12%)
Query: 68 ILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE---KA-L 123
I+ V + ++ + +S G G + +I IL + + + E+ AE KA
Sbjct: 37 IVWVGSLLTTCITIAPAS-FGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQA 95
Query: 124 EALKKIQCES-GKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVE 182
++LK + + K+LRD + +PA L GDIV + GD +P D V S V+
Sbjct: 96 DSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVAS---VD 152
Query: 183 QSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQ 242
+S++TGE+ P++K + F V GT +++ V T + ++
Sbjct: 153 ESAITGESAPVIKESGGDFAS----------VTGGTRILSDWLVVECTANPGETFLDRMI 202
Query: 243 KQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQF 302
+ A + TP L LT LV +W G +V
Sbjct: 203 ALVEGA--QRRKTPNEIALTILLIALTLVFLLVTATLWPFAAYG--------GNAISV-- 250
Query: 303 SFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTV 362
+ VAL V IP + +++ G ++ N I +VE G
Sbjct: 251 ---------TVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDT 301
Query: 363 ICSDKTGTLTTNQMSVTEFFTLG 385
+ DKTGT+T +EF
Sbjct: 302 LLLDKTGTITLGNRLASEFIPAQ 324
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 60.1 bits (145), Expect = 5e-09
Identities = 69/289 (23%), Positives = 131/289 (45%), Gaps = 45/289 (15%)
Query: 101 IVLILVLNAIVGVWQESNAE----KALEALKKIQCE--SGKVLRDG-YLVPDLPAIGLVP 153
I +IL+L + + E+ AE AL++ Q E + ++ +DG Y + D A L
Sbjct: 68 IFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMID--ASDLKK 125
Query: 154 GDIVELGVGDKVPADMRVA-ALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKEN 212
G IV + G+++P D +V L T V++S++TGE+ P++K + F +
Sbjct: 126 GHIVRVATGEQIPNDGKVIKGLAT----VDESAITGESAPVIKESGGDF----------D 171
Query: 213 MVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAI 272
V GT+V + + + ++ + K+ + A+ ++ TP ++ F +T I
Sbjct: 172 NVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKK--TP--NEIALFTLLMTLTI 227
Query: 273 GLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITT 332
+ +++ + FL++++ + +ALAV IP + +++
Sbjct: 228 IFLVVILTMYPLAKFLNFNLS-----------------IAMLIALAVCLIPTTIGGLLSA 270
Query: 333 CLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEF 381
G ++ Q N + + SVET G V+ DKTGT+T F
Sbjct: 271 IGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAF 319
|
Length = 673 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 7e-07
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 699 KVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA-MGITGT-EVAKEA 756
+VF+ A+P K +I+R LK+ E V M G+G ND AL+ AD+G+ + G E
Sbjct: 72 RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLT 131
Query: 757 SDMVLAD 763
+D+VL +
Sbjct: 132 ADVVLKE 138
|
Length = 152 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 7e-06
Identities = 26/94 (27%), Positives = 51/94 (54%)
Query: 948 TLSLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVF 1007
T++ + V +MFN+L S+ S+ + + N A+ S+ L++Y P L VF
Sbjct: 790 TMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVF 849
Query: 1008 GVVPLNLNEWFLVILVSAPVILIDEVLKFVGRNR 1041
L++ + ++L+++ V ++DE+ K V R+R
Sbjct: 850 QTEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 1e-05
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 712 IVRMLKEMG----EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFG 767
+ + K +G EV+A GDG ND L+LA +GVAMG + K A+D V +N
Sbjct: 191 LKALAKHLGIDLEEVIAF-GDGENDIEMLELAGLGVAMG-NASPEVKAAADYVTGSNNED 248
Query: 768 SI 769
+
Sbjct: 249 GV 250
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 4e-05
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 714 RMLKEMG---EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSI 769
+ + +G E V GDG+ND L+ A GVAMG E K +D V +N +
Sbjct: 195 SLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGV 252
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 9e-05
Identities = 78/329 (23%), Positives = 131/329 (39%), Gaps = 58/329 (17%)
Query: 71 VAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE---KAL-EAL 126
V + ++ L F G G + L I +IL + + E+ AE KA ++L
Sbjct: 40 VGSILTTFLTIFPDLFGGTGGSRLFN--LAITIILWFTVLFANFAEAVAEGRGKAQADSL 97
Query: 127 KKIQCES-GKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSS 185
+K + E+ ++LR + +PA L GDIV + G+ +P+D V S V++S+
Sbjct: 98 RKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVAS---VDESA 154
Query: 186 LTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQI 245
+TGE+ P+++ E + V GT V++ + I N + + I
Sbjct: 155 ITGESAPVIR----------ESGGDFSSVTGGTRVLSDW---LKIRITANPGETFLDRMI 201
Query: 246 HDASLEESDTPLRKKL-DEFG-NRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFS 303
+L E R+K +E L + + L+ L+ V +P +
Sbjct: 202 ---ALVEGAE--RQKTPNEIALTILLSGLTLIFLLA------------VATLYPFAIYSG 244
Query: 304 FEKCTYYFKIAVALAVAAIPEGLPAVITTCLAL-------GTRKMAQKNAIVRKLPSVET 356
+ +A L V IP TT L G ++ Q N I +VE
Sbjct: 245 GGAASVTVLVA--LLVCLIP-------TTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEA 295
Query: 357 LGCTTVICSDKTGTLTTNQMSVTEFFTLG 385
G + DKTGT+T +EF +
Sbjct: 296 AGDVDTLLLDKTGTITLGNRQASEFIPVP 324
|
Length = 681 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 46.0 bits (110), Expect = 1e-04
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 68 ILLVAAFISFILAYF--HSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE---KA 122
++ V + ++ IL G +GF L I L L + + E+ AE KA
Sbjct: 38 VVEVGSILTTILTIAPLLFQSGGPAGFN-----LAITLWLWFTVLFANFAEALAEGRGKA 92
Query: 123 L-EALKKIQCES-GKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
++L+ + ++ + LR+ ++PA L GDIV + G+ +PAD V S
Sbjct: 93 QADSLRGAKKDTFARKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVAS--- 149
Query: 181 VEQSSLTGEAMPILK 195
V++S++TGE+ P+++
Sbjct: 150 VDESAITGESAPVIR 164
|
Length = 679 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 6e-04
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 718 EMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMV 760
+ EV A+ GD ND ++A GVA+ E KEA+D V
Sbjct: 172 DPEEVAAI-GDSENDLEMFEVAGFGVAVA-NADEELKEAADYV 212
|
Length = 230 |
| >gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.002
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 714 RMLKEMG----EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSI 769
R+ K +G EV+A GD ND L++A +GVAMG E KE +D V ++ +
Sbjct: 196 RLAKLLGIKLEEVIAF-GDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGV 253
Query: 770 VSAVAE 775
A+ +
Sbjct: 254 AEALEK 259
|
Length = 264 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.002
Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 15/122 (12%)
Query: 629 GVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDL----TGRSFTGKEFMAL 684
GV +A+ + + GI++ + T ++ + ++ L + + + KE + L
Sbjct: 28 GVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFL 87
Query: 685 SSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALK-LADIGV 743
+ + K +++L E V M GD +ND K +GV
Sbjct: 88 G-GGPFDIGKPNPDK---------LLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137
Query: 744 AM 745
A+
Sbjct: 138 AV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1051 | |||
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.97 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.92 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.86 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.5 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.49 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.47 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.13 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.91 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.85 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.85 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.85 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.8 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.79 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.78 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.75 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.73 | |
| PLN02887 | 580 | hydrolase family protein | 98.67 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.67 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.64 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.64 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.62 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.62 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.61 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.53 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.44 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.42 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.42 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.36 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.36 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.31 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.24 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.17 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.14 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.13 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.09 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.08 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.96 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.93 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.87 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.86 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.82 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.79 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.78 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.77 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.66 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.63 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.58 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.54 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.46 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.44 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.39 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.35 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.32 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.3 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.25 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.21 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.07 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.05 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.04 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.98 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.96 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.82 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.8 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.76 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.69 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.68 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.64 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.61 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.52 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.44 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.43 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.29 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.28 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.28 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.26 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.23 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.2 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.19 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.16 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.13 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.05 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.03 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.97 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 95.68 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 95.67 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.66 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 95.62 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.56 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.39 | |
| PRK06769 | 173 | hypothetical protein; Validated | 95.32 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.29 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.16 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 95.15 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.14 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 95.14 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 94.8 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 94.77 | |
| PLN02940 | 382 | riboflavin kinase | 94.74 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 94.73 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.68 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 94.64 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 94.52 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 94.44 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 94.27 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 94.16 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 94.08 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 93.6 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 93.53 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 93.36 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 93.14 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 93.08 | |
| PLN02811 | 220 | hydrolase | 93.08 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 92.15 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 92.1 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 91.87 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 91.82 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 91.8 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 91.42 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 91.31 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 91.26 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 91.14 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 90.72 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 90.05 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 89.72 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 89.05 | |
| PLN03017 | 366 | trehalose-phosphatase | 88.28 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 88.05 | |
| PLN02580 | 384 | trehalose-phosphatase | 87.56 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 87.35 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 87.07 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 86.45 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 85.01 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 83.95 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 83.82 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 82.0 |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-174 Score=1452.68 Aligned_cols=960 Identities=54% Similarity=0.848 Sum_probs=869.4
Q ss_pred cccccCCHHHHHHHcCCCCCCCCCHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhcCC
Q 001568 6 FPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSS 85 (1051)
Q Consensus 6 ~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~ils~~~~~~~~~ 85 (1051)
.+.|+.+++|+++.|+||+++||+.+|+.+|+++||+|+++.....++|+++++||.+++..+|++++++||++..+
T Consensus 2 ~~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~~--- 78 (972)
T KOG0202|consen 2 EEAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLADF--- 78 (972)
T ss_pred cchhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHhc---
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999998743
Q ss_pred CCCCCCccccchhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCceeEEEECCeeceEeeCCCccCCcEEEeCCCCcc
Q 001568 86 DSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKV 165 (1051)
Q Consensus 86 ~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~~I~~~~Lv~GDII~l~~G~~v 165 (1051)
.++++|.+++++++.+++|||++++|++++|+++.|+.++|+|+|+. +.+++++|||||||.|+-||+|
T Consensus 79 ----------~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~-~~i~A~eLVPGDiV~l~vGDkV 147 (972)
T KOG0202|consen 79 ----------DEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKL-QHILARELVPGDIVELKVGDKI 147 (972)
T ss_pred ----------ccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcc-cceehhccCCCCEEEEecCCcc
Confidence 46788888999999999999999999999999999999999999998 9999999999999999999999
Q ss_pred cccEEEEEecCCceEEeccCCCCCCcccccCCCCCC-CCcccccccccEEEeccEEEeceEEEEEEEeccchhhhHHHHH
Q 001568 166 PADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVF-LDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQ 244 (1051)
Q Consensus 166 PaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~-~~~~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~ 244 (1051)
|||.|+++. -++.||||+|||||.|+.|...+.+ +++....++.|++|+||.|..|+++|+|+.||.+|.+|++.++
T Consensus 148 PADlRl~e~--~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~ 225 (972)
T KOG0202|consen 148 PADLRLIEA--KSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKM 225 (972)
T ss_pred ccceeEEee--eeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHH
Confidence 999999984 4599999999999999999888777 6778889999999999999999999999999999999999999
Q ss_pred HhhccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhHHHHHHHHHHHHHHhcCC
Q 001568 245 IHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPE 324 (1051)
Q Consensus 245 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~ 324 (1051)
+... +..+||||++++++...+..++.++++.+|++.+.++......+.| ++....+|.+++++.+++||+
T Consensus 226 m~~~--e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~-------fk~~~~~f~IaVsLAVAAIPE 296 (972)
T KOG0202|consen 226 MQAT--ESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSW-------FKGALYYFKIAVSLAVAAIPE 296 (972)
T ss_pred Hhcc--CCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccc-------hhchhhhhhHHHHHHHHhccC
Confidence 9888 8889999999999999999888999999998876555432222234 667788999999999999999
Q ss_pred chHHHHHHHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCcccceeeEeecCcccCCC
Q 001568 325 GLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPK 404 (1051)
Q Consensus 325 ~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (1051)
|||+.+++++++|.+||+|++++||+++++|+||.+++||+|||||||+|+|++.+++..+........+..++..|+|.
T Consensus 297 GLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~ 376 (972)
T KOG0202|consen 297 GLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPE 376 (972)
T ss_pred CCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999887665557778889999998
Q ss_pred CCCccCCCC----CCChHHHHHHHHHHhhhccCccccCC-CcccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhh
Q 001568 405 DGGIVDWPC----YNMDANLQAMAKICAVCNDAGVYCDG-PLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAAN 479 (1051)
Q Consensus 405 ~~~~~~~~~----~~~~~~~~~~~~~~~~c~~~~~~~~~-~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~ 479 (1051)
++...+... ......++++++++++||++.++.+. +.|+..|.|+|.||..+++++|+......+.
T Consensus 377 g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~--------- 447 (972)
T KOG0202|consen 377 GEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNL--------- 447 (972)
T ss_pred CceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcc---------
Confidence 776654422 23567789999999999999888655 7788899999999999999999876431100
Q ss_pred hcccccccccccccccccccceeEeecCCCCCceEEEEEecCCCc--EEEEEcCChhHHHhhccccccCCC-ceecCCHH
Q 001568 480 YLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGH--NQLLVKGSVESLLERSSHVQLADG-SVVPLDEP 556 (1051)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~~~~--~~~~~KGa~e~i~~~c~~~~~~~~-~~~~l~~~ 556 (1051)
+..+ ...|+..+.+.++..+++||+|+||+|||.+.+..++ +.+|+|||+|.++++|+++...+| ...|+++.
T Consensus 448 ---s~~~-~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~ 523 (972)
T KOG0202|consen 448 ---SNEE-ASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQA 523 (972)
T ss_pred ---cccc-cccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHH
Confidence 0111 2245666777888999999999999999999976665 899999999999999998887776 55999999
Q ss_pred HHHHHHHHHHHHhhccceEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChhHHHHHHH
Q 001568 557 CWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDD 636 (1051)
Q Consensus 557 ~~~~~~~~~~~~a~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~ 636 (1051)
.|+.+.+...+|+++|+|||++|+++.+.. .+.+.+..+...+...|+||+|+|++|+.||||++++++|+.
T Consensus 524 ~re~il~~~~~~g~~gLRvLalA~~~~~~~--------~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~ 595 (972)
T KOG0202|consen 524 SRETILANVYEMGSEGLRVLALASKDSPGQ--------VPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIEL 595 (972)
T ss_pred HHHHHHHHHHHHhhccceEEEEEccCCccc--------ChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHH
Confidence 999999999999999999999999976631 122223345566788899999999999999999999999999
Q ss_pred HHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCchhHHHHHHHH
Q 001568 637 CRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRML 716 (1051)
Q Consensus 637 l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l 716 (1051)
|+++||||.|+|||+..||.+||+++|+....+++.+.+++|++++.++++++.+.+. +..+|+|++|++|.+||+.|
T Consensus 596 c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~--~~~vFaR~~P~HK~kIVeaL 673 (972)
T KOG0202|consen 596 CRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVR--RVLVFARAEPQHKLKIVEAL 673 (972)
T ss_pred HHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhh--cceEEEecCchhHHHHHHHH
Confidence 9999999999999999999999999999998888889999999999999999999888 88999999999999999999
Q ss_pred hhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 001568 717 KEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVG 796 (1051)
Q Consensus 717 ~~~g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~n~~ 796 (1051)
|++|++|+|+|||.||+||||.||||||||++|+++||+|||+++.||||++|+.+++|||.+|+|+++++.|+++.|+.
T Consensus 674 q~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVg 753 (972)
T KOG0202|consen 674 QSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVG 753 (972)
T ss_pred HhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhhhhccCCCCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHH
Q 001568 797 EVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVG 876 (1051)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (1051)
.+..++++..|++|.|++|+|+||+|+++|++|+.+||++|+|+|+|++|||+.++++++.|.+++++..|++.+..+++
T Consensus 754 ev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~ 833 (972)
T KOG0202|consen 754 EVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVG 833 (972)
T ss_pred HHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHhhcccccccccCCCCcccccccccccCccCCCCCccccccccCCCcccccCCCCccccccccchhHHHHHHHHH
Q 001568 877 IFVLWYTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVA 956 (1051)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~t~~f~~lv~ 956 (1051)
.|.+|+.+. ...+...++.+|..|..-. ...+|.+|... .+.|++|+++|+
T Consensus 834 ~f~~~~~~~-----------~~~vt~~~~~~~~~c~~~~----------------~~~~c~~F~~~--~~~tMa~tv~V~ 884 (972)
T KOG0202|consen 834 VFVWWMYGA-----------DGKVTYRQLAHYNSCCRDF----------------YGSRCAVFEDM--CPLTMALTVLVF 884 (972)
T ss_pred hhhHHHhcC-----------CCCcChhhhcchhhhcccc----------------cccchhhhccc--ccceEEEeehhH
Confidence 888887642 2336667777777776411 12356676533 678999999999
Q ss_pred HHHHHhhhccccCCCccccCCCCChHHHHHHHHHHHHHHHHHhccccccccccccCChhhHHHHHHHHHHHHHHHHHHHH
Q 001568 957 IEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLVILVSAPVILIDEVLKF 1036 (1051)
Q Consensus 957 ~q~~~~~~~~~~~~s~~~~~~~~N~~~~~~i~~~~~l~~~i~~vp~~~~~f~~~~l~~~~w~~~l~~~~~~l~i~e~~K~ 1036 (1051)
..+||+++||+.++|.|..++|+|+|+++++++++++++.++|+|+++.+|+++||++.+|++.+.+++.+++++|++|+
T Consensus 885 ~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~ 964 (972)
T KOG0202|consen 885 IEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQRIFQTEPLSLAEWLLVLAISSPVIIVDEILKF 964 (972)
T ss_pred HHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhhhhheecCCcHHHHHHHHHHhhhhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhccc
Q 001568 1037 VGRNRR 1042 (1051)
Q Consensus 1037 ~~R~~~ 1042 (1051)
+.|+..
T Consensus 965 ~~R~~~ 970 (972)
T KOG0202|consen 965 IARNYF 970 (972)
T ss_pred HHHhcc
Confidence 988753
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-148 Score=1241.20 Aligned_cols=901 Identities=32% Similarity=0.461 Sum_probs=771.8
Q ss_pred CHHHHHHHcCCCCCCCCCH--HHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 001568 12 TVEQCLKEYNVKLDKGLSS--REVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGD 89 (1051)
Q Consensus 12 ~~~~~~~~l~~~~~~GLs~--~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~ils~~~~~~~~~~~~~ 89 (1051)
.+++++++|+||+..||+. +|+.+|++.||.|.++++++++||+++|+.+++...+++.++|++|+.++++.+
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~----- 176 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTP----- 176 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccC-----
Confidence 5899999999999999986 999999999999999999999999999999999999999999999999999865
Q ss_pred CCccccchhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhh-cCceeEEEECCeeceEeeCCCccCCcEEEeCCCCccccc
Q 001568 90 SGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKI-QCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPAD 168 (1051)
Q Consensus 90 ~~~~~~~~~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~-~~~~~~V~r~g~~~~~I~~~~Lv~GDII~l~~G~~vPaD 168 (1051)
.....|++++.|++.+++..++....+++.++.++.|++. +..++.|+|||+. ++|+..|||||||+.|+.||.+|||
T Consensus 177 g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r-~~isI~diVVGDIv~lk~GDqvPAD 255 (1034)
T KOG0204|consen 177 GIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRR-QQISIYDLVVGDIVQLKIGDQVPAD 255 (1034)
T ss_pred CCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEE-EEEEEeeeeeccEEEeecCCccccc
Confidence 2233789999988888887888888899999999998754 4568999999998 9999999999999999999999999
Q ss_pred EEEEEecCCceEEeccCCCCCCcccccCCCCCCCCcccccccccEEEeccEEEeceEEEEEEEeccchhhhHHHHHHhhc
Q 001568 169 MRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDA 248 (1051)
Q Consensus 169 ~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 248 (1051)
|++++ ++++.+|||++||||+++.|.+. .++++++||++.+|.++++|+.+|.+|..|+++..+...
T Consensus 256 Gvli~--gn~L~iDESSlTGESd~v~k~~~-----------~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~ 322 (1034)
T KOG0204|consen 256 GVLIQ--GNSLKIDESSLTGESDHVQKSLD-----------KDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAG 322 (1034)
T ss_pred eEEEe--ccceeEecccccCCCcceeccCC-----------CCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcC
Confidence 99997 78999999999999999999863 458999999999999999999999999999999998877
Q ss_pred cccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc-cCC---CCcccccchhhHHHHHHHHHHHHHHhcCC
Q 001568 249 SLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDV-VDG---WPANVQFSFEKCTYYFKIAVALAVAAIPE 324 (1051)
Q Consensus 249 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~i~ll~~~iP~ 324 (1051)
..++||||-++++++..+..+.+.++++.+++...++..... .++ |. ......+.+..+|..++.++++++|+
T Consensus 323 --~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~-~~~~~~~~~v~~f~i~VTilVVAVPE 399 (1034)
T KOG0204|consen 323 --GEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTT-WSDEYIQEFVKFFIIAVTILVVAVPE 399 (1034)
T ss_pred --CCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCcc-ccHHHHHHHHHHhhheeEEEEEECCC
Confidence 678999999999999999988888877777665554432111 111 11 11122456788889999999999999
Q ss_pred chHHHHHHHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCcccceeeEeecCcccCCC
Q 001568 325 GLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPK 404 (1051)
Q Consensus 325 ~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (1051)
|||++++++++++++||.+++.++|.+++||++|+.++||+|||||||+|+|+|.+.++.++.++. +. |.
T Consensus 400 GLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~------~~----~~ 469 (1034)
T KOG0204|consen 400 GLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKV------NS----PK 469 (1034)
T ss_pred CccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccc------cC----cc
Confidence 999999999999999999999999999999999999999999999999999999999997653321 10 10
Q ss_pred CCCccCCCCCCChHHHHHHHHHHhhhccCcccc---CCCcccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhhhc
Q 001568 405 DGGIVDWPCYNMDANLQAMAKICAVCNDAGVYC---DGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYL 481 (1051)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~---~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~ 481 (1051)
. ..-.......+...++...+..+.. .+...++.|+|+|.||+.+..++|.++...
T Consensus 470 ~-------~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~-------------- 528 (1034)
T KOG0204|consen 470 S-------SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDV-------------- 528 (1034)
T ss_pred c-------ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhh--------------
Confidence 0 0112233344555666554444433 223678899999999999999998865432
Q ss_pred ccccccccccccccccccceeEeecCCCCCceEEEEEecCCCcEEEEEcCChhHHHhhccccccCCCceecCCHHHHHHH
Q 001568 482 IDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLM 561 (1051)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~~~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~ 561 (1051)
+....+.+.+||+|.||+|+++++.+++..++++|||.|.++..|+++...+|+..+++++.+..+
T Consensus 529 --------------R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~ 594 (1034)
T KOG0204|consen 529 --------------RPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSF 594 (1034)
T ss_pred --------------cchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHH
Confidence 234568899999999999999999877773499999999999999999999999999999999999
Q ss_pred HHHHHHHhhccceEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChhHHHHHHHHHhCC
Q 001568 562 LSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAG 641 (1051)
Q Consensus 562 ~~~~~~~a~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~~g 641 (1051)
++.++.||++|+|++|+|||++.+...+ ..+....+..+.+++++|++|++||.|||++++|+.|++||
T Consensus 595 ~~~Ie~mA~~~LRti~lAy~df~~~~~~-----------~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AG 663 (1034)
T KOG0204|consen 595 KDVIEPMASEGLRTICLAYRDFVAGPDE-----------EPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAG 663 (1034)
T ss_pred HHHHHHHHHhhhheeeEEeeccccCCCC-----------CCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcC
Confidence 9999999999999999999987643110 01111123457899999999999999999999999999999
Q ss_pred cEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCchhHHHHHHHHhhcCC
Q 001568 642 IEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGE 721 (1051)
Q Consensus 642 i~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~ 721 (1051)
|.|.|+||||..||++||.+|||..++.+ -.+++|.++.++++++.+++++ +..|+||++|.+|.-+|+.++++|+
T Consensus 664 ItVRMVTGDNI~TAkAIA~eCGILt~~~d--~~~lEG~eFr~~s~ee~~~i~p--kl~VlARSSP~DK~lLVk~L~~~g~ 739 (1034)
T KOG0204|consen 664 ITVRMVTGDNINTAKAIARECGILTPGGD--FLALEGKEFRELSQEERDKIWP--KLRVLARSSPNDKHLLVKGLIKQGE 739 (1034)
T ss_pred cEEEEEeCCcHHHHHHHHHHcccccCCCc--cceecchhhhhcCHHHHHhhhh--hheeeecCCCchHHHHHHHHHhcCc
Confidence 99999999999999999999999988765 4789999999999999999999 8999999999999999999999999
Q ss_pred EEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 001568 722 VVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISI 801 (1051)
Q Consensus 722 ~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~n~~~~~~~ 801 (1051)
+|+++|||+||+|||++||||.|||+.|+|+||++||+|++||||++|+++++|||+.|+||+|+++|++..|++.+++.
T Consensus 740 VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~ 819 (1034)
T KOG0204|consen 740 VVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVN 819 (1034)
T ss_pred EEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCchhHHHHHHHHHHHhhhhhhhccCCCCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 001568 802 FLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLW 881 (1051)
Q Consensus 802 ~~~~~~~~~~~~~~~~~l~~n~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (1051)
|...+....+|++++|+||+|+|||++.+|+|+++||++++|+|+|..++++++++.+|..++.+++|+-++++.+ .
T Consensus 820 fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL---~ 896 (1034)
T KOG0204|consen 820 FVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFIL---N 896 (1034)
T ss_pred hhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH---H
Confidence 9999988889999999999999999999999999999999999999999999999977666677888876543322 2
Q ss_pred HhhcccccccccCCCCcccccccccccCccCCCCCccccccccCCCcccccCCCCccccccccchhHHHHHHHHHHHHHH
Q 001568 882 YTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMFN 961 (1051)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~t~~f~~lv~~q~~~ 961 (1051)
+....+|+.+-+ . +.......|++|++||+||+||
T Consensus 897 F~G~~if~~~~~--------------------------------------------~-~~~~~~~nTiIFNtFV~~qvFN 931 (1034)
T KOG0204|consen 897 FAGKSIFGLNGP--------------------------------------------L-HSPPSVHNTIIFNTFVFCQVFN 931 (1034)
T ss_pred hcchhhhccCCC--------------------------------------------C-CCchhhheeeehhHHHHHHHHH
Confidence 222223321100 0 0112345799999999999999
Q ss_pred hhhccccCCCccccCCCCChHHHHHHHHHHHHHHHHHhccccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 001568 962 SLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLVILVSAPVILIDEVLKFVGRNR 1041 (1051)
Q Consensus 962 ~~~~~~~~~s~~~~~~~~N~~~~~~i~~~~~l~~~i~~vp~~~~~f~~~~l~~~~w~~~l~~~~~~l~i~e~~K~~~R~~ 1041 (1051)
.+|+|+..+--.+.++++|++|+..+.+.+++|+ +.+.|++.+|++++|++.+|++|+.++++.+.+.++.|.+.-..
T Consensus 932 EinaRki~~~NvFkgi~~N~~F~~ii~~T~v~Qv--iIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~~ 1009 (1034)
T KOG0204|consen 932 EINARKIDERNVFKGIFRNRLFCVIITITVVSQV--IIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCIPVSS 1009 (1034)
T ss_pred HHhhcchhHHhHHHHHhcCceEEEEeeeeeehhh--hhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheeccccc
Confidence 9999986543345589999999999999988887 55788999999999999999999999999999999999874444
Q ss_pred ccc
Q 001568 1042 RLS 1044 (1051)
Q Consensus 1042 ~~~ 1044 (1051)
.|.
T Consensus 1010 ~~~ 1012 (1034)
T KOG0204|consen 1010 LPK 1012 (1034)
T ss_pred ccc
Confidence 333
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-144 Score=1345.42 Aligned_cols=949 Identities=29% Similarity=0.449 Sum_probs=776.9
Q ss_pred cccccCCHHHHHHHcCCCCCCCCCHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhcCC
Q 001568 6 FPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSS 85 (1051)
Q Consensus 6 ~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~ils~~~~~~~~~ 85 (1051)
-+||.++++++.+.|+|+..+|||++|+++|+++||+|+++.++++++|+.+++||++++.++++++++++++++
T Consensus 5 ~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~----- 79 (1053)
T TIGR01523 5 NAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH----- 79 (1053)
T ss_pred CchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh-----
Confidence 468999999999999999989999999999999999999999998999999999999999999999999999874
Q ss_pred CCCCCCccccchhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCceeEEEECCeeceEeeCCCccCCcEEEeCCCCcc
Q 001568 86 DSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKV 165 (1051)
Q Consensus 86 ~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~~I~~~~Lv~GDII~l~~G~~v 165 (1051)
.|.++++++++++++++++++||+++++++++|+++.+++++|+|||++ ++|+++||||||||.|++||+|
T Consensus 80 --------~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~-~~I~a~eLVpGDIv~L~~Gd~V 150 (1053)
T TIGR01523 80 --------DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKS-DAIDSHDLVPGDICLLKTGDTI 150 (1053)
T ss_pred --------hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCee-eecCHhhCCCCCEEEECCCCEe
Confidence 5678899999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred cccEEEEEecCCceEEeccCCCCCCcccccCCCCCC--CCcccccccccEEEeccEEEeceEEEEEEEeccchhhhHHHH
Q 001568 166 PADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVF--LDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQK 243 (1051)
Q Consensus 166 PaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~--~~~~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~ 243 (1051)
|||++|++ ++++.||||+|||||.|+.|.+.+.. .++.+..++.|++|+||.|.+|+++|+|++||.+|.+|+|++
T Consensus 151 PAD~rLi~--~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~ 228 (1053)
T TIGR01523 151 PADLRLIE--TKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAA 228 (1053)
T ss_pred eccEEEEE--eCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHH
Confidence 99999997 67899999999999999999875432 123455678899999999999999999999999999999999
Q ss_pred HHhhccc---c------------------------------CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 001568 244 QIHDASL---E------------------------------ESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSW 290 (1051)
Q Consensus 244 ~~~~~~~---~------------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1051)
++..... + ..+||||+++++++.++..++++++++++++....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~---- 304 (1053)
T TIGR01523 229 GLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFD---- 304 (1053)
T ss_pred HHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----
Confidence 8864311 0 12499999999999998888877777776543210
Q ss_pred cccCCCCcccccchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcc
Q 001568 291 DVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGT 370 (1051)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGT 370 (1051)
.+ ...+..+++++++++|++||++++++++++++||+++++++|+++++|+||++++||+|||||
T Consensus 305 ----~~-----------~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGT 369 (1053)
T TIGR01523 305 ----VD-----------KEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGT 369 (1053)
T ss_pred ----hh-----------HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCc
Confidence 01 234556789999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCeEEEEEEecCCcccceeeEeec--CcccCCCCCC---------------------cc--------CCC-CC-CCh
Q 001568 371 LTTNQMSVTEFFTLGRKTTISRIFHVE--GTTYDPKDGG---------------------IV--------DWP-CY-NMD 417 (1051)
Q Consensus 371 LT~n~m~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---------------------~~--------~~~-~~-~~~ 417 (1051)
||+|+|+|++++..+.. .+.++ +..|.|..+. .. ... .. ..+
T Consensus 370 LT~N~M~V~~i~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1053)
T TIGR01523 370 ITQGKMIARQIWIPRFG-----TISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDM 444 (1053)
T ss_pred cccceEEEEEEEEcCCc-----eEEecCCCCCCCCccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999875411 01111 1112111000 00 000 00 012
Q ss_pred HHHHHHHHHHhhhccCccccC--CCcccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhhhccccccccccccccc
Q 001568 418 ANLQAMAKICAVCNDAGVYCD--GPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWW 495 (1051)
Q Consensus 418 ~~~~~~~~~~~~c~~~~~~~~--~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (1051)
+.+..++.++++||++....+ ++.+...|||+|.||+.++.+.|+................ ..............
T Consensus 445 ~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 521 (1053)
T TIGR01523 445 DLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNE---NDQSSLSQHNEKPG 521 (1053)
T ss_pred HHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhcc---cccccccccccccc
Confidence 346678889999998876432 2334567999999999999998874211000000000000 00000000000111
Q ss_pred ccccceeEeecCCCCCceEEEEEecCCC-cEEEEEcCChhHHHhhccccccCCC-ceecCCHHHHHHHHHHHHHHhhccc
Q 001568 496 TKRSKRVATLEFDRIRKSMSVIVREPTG-HNQLLVKGSVESLLERSSHVQLADG-SVVPLDEPCWQLMLSRHLEMSSKGL 573 (1051)
Q Consensus 496 ~~~~~~l~~~~F~s~rk~msviv~~~~~-~~~~~~KGa~e~i~~~c~~~~~~~~-~~~~l~~~~~~~~~~~~~~~a~~G~ 573 (1051)
...|++++++||+|+|||||++++.+++ .+++|+|||||.|+++|++....+| ...+++++.++.+.+.+++|+++|+
T Consensus 522 ~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~Gl 601 (1053)
T TIGR01523 522 SAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGL 601 (1053)
T ss_pred ccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCC
Confidence 3468899999999999999999986544 4789999999999999987655444 4678999999999999999999999
Q ss_pred eEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCHH
Q 001568 574 RCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKS 653 (1051)
Q Consensus 574 rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ 653 (1051)
|||++|||.++.+... .... ..+...++.+|+||+|+|+++++||+|++++++|+.|+++||+++|+|||++.
T Consensus 602 RvLa~A~r~l~~~~~~--~~~~-----~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~ 674 (1053)
T TIGR01523 602 RVLAFASKSFDKADNN--DDQL-----KNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPE 674 (1053)
T ss_pred eEEEEEEEECCchhcc--chhh-----hccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHH
Confidence 9999999988643110 0000 00011234578999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCC------CccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCchhHHHHHHHHhhcCCEEEEEc
Q 001568 654 TAEAICRQIKLFSGNE------DLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTG 727 (1051)
Q Consensus 654 ta~~ia~~~gi~~~~~------~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iG 727 (1051)
||.++|+++||.+... .....+++|.+++.++++++.+.+. ...||||++|+||.++|+.+|++|++|+|+|
T Consensus 675 tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~--~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~G 752 (1053)
T TIGR01523 675 TAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKA--LCLVIARCAPQTKVKMIEALHRRKAFCAMTG 752 (1053)
T ss_pred HHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhh--cCeEEEecCHHHHHHHHHHHHhcCCeeEEeC
Confidence 9999999999975421 1124689999999999999888887 6789999999999999999999999999999
Q ss_pred CCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001568 728 DGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAAL 807 (1051)
Q Consensus 728 Dg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~n~~~~~~~~~~~~~ 807 (1051)
||.||+|||++||||||||.+|+++|+++||+++.+|+|.++++++++||++|.|+++++.|.+++|+..+++.+++.++
T Consensus 753 DGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~ 832 (1053)
T TIGR01523 753 DGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAF 832 (1053)
T ss_pred CCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred ----cC-CCchhHHHHHHHHHHHhhhhhhhccCCCCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001568 808 ----GI-PECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWY 882 (1051)
Q Consensus 808 ----~~-~~~~~~~~~l~~n~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (1051)
|. |.|++|+|++|+|+++|.+|+++|+++||++++|++||+.+++++++++.+.++++.|+++++.+++.|.+++
T Consensus 833 ~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~ 912 (1053)
T TIGR01523 833 RDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGIL 912 (1053)
T ss_pred hcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 4799999999999999999999999999999999999999999999998888899999998887776665432
Q ss_pred hhcccccccccCCCCcccccccccccCccCCCCCccccccccCCCcccccCCCCccccccccchhHHHHHHHHHHHHHHh
Q 001568 883 TKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMFNS 962 (1051)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~t~~f~~lv~~q~~~~ 962 (1051)
... ..| .+ ...|..+.+ ..+. ....++|++|.+++++|+++.
T Consensus 913 ~~~-~~~--------------~~--~~~~~~~~~-----------------~~~~----~~~~a~t~~f~~l~~~~~~~~ 954 (1053)
T TIGR01523 913 YGF-GSG--------------NL--GHDCDAHYH-----------------AGCN----DVFKARSAAFATMTFCALILA 954 (1053)
T ss_pred Hhc-cCc--------------cc--ccccccccc-----------------cccc----chhhhHHHHHHHHHHHHHHHH
Confidence 211 000 00 011211110 0110 123579999999999999999
Q ss_pred hhccccCCCccccC---------------CCCChHHHHHHHHHHHHHHHHHhcccccc-ccccccCChhhHHHHHHHHHH
Q 001568 963 LNALSEDNSLVTMP---------------PWRNPWLLVAMSVSLGLHCLILYVPFLAD-VFGVVPLNLNEWFLVILVSAP 1026 (1051)
Q Consensus 963 ~~~~~~~~s~~~~~---------------~~~N~~~~~~i~~~~~l~~~i~~vp~~~~-~f~~~~l~~~~w~~~l~~~~~ 1026 (1051)
++||+++.++|+.+ .|+|++++++++++++++++++|+|+++. +|++.|+++ +|+++++++++
T Consensus 955 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~~f~~~~l~~-~w~~~~~~~~~ 1033 (1053)
T TIGR01523 955 VEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFKHKPIGA-EWGLAAAATIA 1033 (1053)
T ss_pred HHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCcch-HHHHHHHHHHH
Confidence 99999988887653 68999999999999999999999999996 999999996 99999999999
Q ss_pred HHHHHHHHHHHhhccccch
Q 001568 1027 VILIDEVLKFVGRNRRLSG 1045 (1051)
Q Consensus 1027 ~l~i~e~~K~~~R~~~~~~ 1045 (1051)
.++++|++|+++|++.+.+
T Consensus 1034 ~~~~~e~~K~~~r~~~~~~ 1052 (1053)
T TIGR01523 1034 FFFGAEIWKCGKRRLFKPQ 1052 (1053)
T ss_pred HHHHHHHHHHHHHhccccC
Confidence 9999999999987765443
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-138 Score=1300.48 Aligned_cols=942 Identities=29% Similarity=0.434 Sum_probs=772.4
Q ss_pred cccccCCHHHHHHHcCCCCCCCCCHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhcCC
Q 001568 6 FPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSS 85 (1051)
Q Consensus 6 ~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~ils~~~~~~~~~ 85 (1051)
-+||.++++++++.|+|+..+|||++|+++|+++||+|+++.++++++|+.++++|+++++++++++++++++.+.+...
T Consensus 15 ~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~ 94 (997)
T TIGR01106 15 MDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQAS 94 (997)
T ss_pred CCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhc
Confidence 36899999999999999999999999999999999999999988999999999999999999999999998876554321
Q ss_pred CCCCCCccccchhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCceeEEEECCeeceEeeCCCccCCcEEEeCCCCcc
Q 001568 86 DSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKV 165 (1051)
Q Consensus 86 ~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~~I~~~~Lv~GDII~l~~G~~v 165 (1051)
++.......|++++++++++++++++++++|+|+++.+++++++.+.+++|+|||++ ++|+++||||||+|.|++||+|
T Consensus 95 ~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~-~~I~~~~lv~GDiv~l~~Gd~I 173 (997)
T TIGR01106 95 TEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEK-MSINAEQVVVGDLVEVKGGDRI 173 (997)
T ss_pred cCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEE-EEeeHHHCCCCCEEEECCCCEE
Confidence 111112236788889999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred cccEEEEEecCCceEEeccCCCCCCcccccCCCCCCCCcccccccccEEEeccEEEeceEEEEEEEeccchhhhHHHHHH
Q 001568 166 PADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQI 245 (1051)
Q Consensus 166 PaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 245 (1051)
||||++++ ++.+.||||+|||||.|+.|.++.. ...+.+.+|++|+||.|.+|++.++|++||.+|++|++.+.+
T Consensus 174 PaD~~il~--~~~l~VdeS~LTGES~pv~K~~~~~---~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~ 248 (997)
T TIGR01106 174 PADLRIIS--AQGCKVDNSSLTGESEPQTRSPEFT---HENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLA 248 (997)
T ss_pred eeeEEEEE--ccCcEEEccccCCCCCceeccCCCc---ccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhh
Confidence 99999997 4569999999999999999987532 223346789999999999999999999999999999999988
Q ss_pred hhccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhHHHHHHHHHHHHHHhcCCc
Q 001568 246 HDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEG 325 (1051)
Q Consensus 246 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~ 325 (1051)
... +.+++|+++.++++++.++.+++++++++++++.... ..| ...+..++++++++|||+
T Consensus 249 ~~~--~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-----------~~~~~~~i~v~v~~iP~~ 309 (997)
T TIGR01106 249 SGL--ENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG------YTW-----------LEAVIFLIGIIVANVPEG 309 (997)
T ss_pred hhc--ccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CCH-----------HHHHHHHHHHHhhcCCcc
Confidence 776 6678999999999999988887777776666543221 112 334567788999999999
Q ss_pred hHHHHHHHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCcccceeeEeecCcccCCCC
Q 001568 326 LPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKD 405 (1051)
Q Consensus 326 L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (1051)
||++++++++.++++|+++|+++|+++++|+||++++||||||||||+|+|+|.+++..+..+ ..++. .++.+
T Consensus 310 L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~------~~~~~-~~~~~ 382 (997)
T TIGR01106 310 LLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIH------EADTT-EDQSG 382 (997)
T ss_pred chHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEE------ecCCc-cCCCC
Confidence 999999999999999999999999999999999999999999999999999999999765321 11110 11110
Q ss_pred CCccCCCCCCChHHHHHHHHHHhhhccCccccCCC-----cccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhhh
Q 001568 406 GGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGP-----LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480 (1051)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~-----~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~ 480 (1051)
.. ........+.+..++++||++.+..+.. ..+..|||+|.||++++.+.+...
T Consensus 383 ~~-----~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~---------------- 441 (997)
T TIGR01106 383 VS-----FDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSV---------------- 441 (997)
T ss_pred cc-----CCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCH----------------
Confidence 00 0112244557888899999876543211 235579999999999998644211
Q ss_pred cccccccccccccccccccceeEeecCCCCCceEEEEEecC---CCcEEEEEcCChhHHHhhccccccCCCceecCCHHH
Q 001568 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREP---TGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPC 557 (1051)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~---~~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~ 557 (1051)
...+..|++++++||+|+||||+++++.. ++.+++|+|||||.|+++|+++. .+|+..+++++.
T Consensus 442 ------------~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~ 508 (997)
T TIGR01106 442 ------------MEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEEL 508 (997)
T ss_pred ------------HHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHh-cCCCcccCCHHH
Confidence 01134678899999999999999988642 24678999999999999999776 478888999999
Q ss_pred HHHHHHHHHHHhhccceEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChhHHHHHHHH
Q 001568 558 WQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDC 637 (1051)
Q Consensus 558 ~~~~~~~~~~~a~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l 637 (1051)
++.+.+.+++++++|+||+++|||.++.+..+. .. ..+....+..|+|++|+|+++++||+|++++++|++|
T Consensus 509 ~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~---~~-----~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l 580 (997)
T TIGR01106 509 KEAFQNAYLELGGLGERVLGFCHLYLPDEQFPE---GF-----QFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKC 580 (997)
T ss_pred HHHHHHHHHHHHhcCCEEEEEEEeecCcccccc---cc-----cccchhhhccccCcEEEEEEeccCCChHHHHHHHHHH
Confidence 999999999999999999999999886431100 00 0000111234889999999999999999999999999
Q ss_pred HhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCC--------------------ccccccCchHHhcCCHHHHHHHHHhcC
Q 001568 638 RGAGIEVMVITGDNKSTAEAICRQIKLFSGNED--------------------LTGRSFTGKEFMALSSTQQIEALSKHG 697 (1051)
Q Consensus 638 ~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~--------------------~~~~~~~g~~~~~l~~~~~~~~~~~~~ 697 (1051)
+++||+++|+|||+..||.++|+++|+.+++.. -...+++|.+++.++++++.+.+.++.
T Consensus 581 ~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~ 660 (997)
T TIGR01106 581 RSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHT 660 (997)
T ss_pred HHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHHhcC
Confidence 999999999999999999999999999754321 012589999999999999999998777
Q ss_pred CeEEEEeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHHH
Q 001568 698 GKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGR 777 (1051)
Q Consensus 698 ~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~gR 777 (1051)
..||||++|+||.++|+.+|++|++|+|+|||.||+|||++||||||||.+|+|+|+++||+++.||+|.+++++++|||
T Consensus 661 ~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR 740 (997)
T TIGR01106 661 EIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGR 740 (997)
T ss_pred CEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhhhhccCCCCCcccccCCCCCC-CCCCcc
Q 001568 778 SIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKI-DDALIN 856 (1051)
Q Consensus 778 ~~~~~i~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~l~l~~~~~~~~~~~~~p~~~-~~~~~~ 856 (1051)
++|.|+++++.|.++.|+..+++.+++.+++.|+|++++|++|+|+++|++|+++++++|+++++|++||+.+ .+++++
T Consensus 741 ~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~ 820 (997)
T TIGR01106 741 LIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVN 820 (997)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCcCCccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999984 678999
Q ss_pred hHHHHHH-HHHHHHHHHHHHHHHHHHHhhcccccccccCCCCcccccccccccCccCCCCCccccccccCCCcccccCCC
Q 001568 857 SWVLLRY-LVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNP 935 (1051)
Q Consensus 857 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 935 (1051)
+++++.+ +..|+++++..++.+++.+.+. |+.... + +..+..|.+...+++....|..++....
T Consensus 821 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---g~~~~~----------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 885 (997)
T TIGR01106 821 ERLISMAYGQIGMIQALGGFFTYFVILAEN---GFLPLH----------L--VGLRVQWDDRWINDLEDSYGQEWTYEQR 885 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCcccc----------c--cccccccccccccccccccccccchhcc
Confidence 8777554 4568888776665554332211 110000 0 0000111110000100000000000000
Q ss_pred CccccccccchhHHHHHHHHHHHHHHhhhccccCCCccccCCCCChHHHHHHHHHHHHHHHHHhccccccccccccCChh
Q 001568 936 CDYFTIGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLN 1015 (1051)
Q Consensus 936 ~~~~~~~~~~a~t~~f~~lv~~q~~~~~~~~~~~~s~~~~~~~~N~~~~~~i~~~~~l~~~i~~vp~~~~~f~~~~l~~~ 1015 (1051)
. .....++|++|.+++++|++|.++||+++.++|+.+ ++|++++++++++++++++++|+|+++.+|++.|+++.
T Consensus 886 --~--~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~-~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~ 960 (997)
T TIGR01106 886 --K--YVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQG-MKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPT 960 (997)
T ss_pred --c--chhhhhhHHHHHHHHHHHHHHHHHhccCcccccccC-CcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHH
Confidence 0 001146899999999999999999999888888766 89999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcc
Q 001568 1016 EWFLVILVSAPVILIDEVLKFVGRNR 1041 (1051)
Q Consensus 1016 ~w~~~l~~~~~~l~i~e~~K~~~R~~ 1041 (1051)
+|+++++++++.++++|++|++.|+.
T Consensus 961 ~w~~~~~~~~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 961 WWFCAFPYSLLIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999988764
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-137 Score=1279.40 Aligned_cols=876 Identities=38% Similarity=0.603 Sum_probs=761.3
Q ss_pred cccccCCHHHHHHHcCCCCCCCCC-HHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHh-hhHHHHHHHHHHHHHHHHHhhc
Q 001568 6 FPAWSWTVEQCLKEYNVKLDKGLS-SREVEKRRERYGWNELDKEKGKPLWQLVLEQF-DDTLVKILLVAAFISFILAYFH 83 (1051)
Q Consensus 6 ~~~~~~~~~~~~~~l~~~~~~GLs-~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f-~~~~~~~ll~~~ils~~~~~~~ 83 (1051)
|+||.+|++++++.|+++..+||| ++|+++|+++||+|+++.++++++|+.+++|| +++++++++++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--- 78 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--- 78 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc---
Confidence 789999999999999999999999 99999999999999999988889999999999 9999999999999998775
Q ss_pred CCCCCCCCccccchhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCceeEEEECCeeceEeeCCCccCCcEEEeCCCC
Q 001568 84 SSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGD 163 (1051)
Q Consensus 84 ~~~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~~I~~~~Lv~GDII~l~~G~ 163 (1051)
.|.++++++++++++..++++||+++++.+++|+++.+.+++|+|||++ ++|+++||||||||.|++||
T Consensus 79 ----------~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~-~~I~~~eLv~GDiv~l~~Gd 147 (884)
T TIGR01522 79 ----------NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKL-EHVLASTLVPGDLVCLSVGD 147 (884)
T ss_pred ----------chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEE-EEEEHHHCccCCEEEecCCC
Confidence 4667788888888899999999999999999999999999999999999 99999999999999999999
Q ss_pred cccccEEEEEecCCceEEeccCCCCCCcccccCCCCCCCC-cccccccccEEEeccEEEeceEEEEEEEeccchhhhHHH
Q 001568 164 KVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLD-DCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQ 242 (1051)
Q Consensus 164 ~vPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~-~~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~ 242 (1051)
+|||||+|++ ++++.||||+|||||.|+.|.+++...+ +....+++|++|+||.|.+|+++++|++||.+|.+|++.
T Consensus 148 ~IPaDg~ii~--g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~ 225 (884)
T TIGR01522 148 RVPADLRIVE--AVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVF 225 (884)
T ss_pred EEeeeEEEEE--cCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHH
Confidence 9999999996 4479999999999999999998653321 234556789999999999999999999999999999999
Q ss_pred HHHhhccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhHHHHHHHHHHHHHHhc
Q 001568 243 KQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAI 322 (1051)
Q Consensus 243 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~i 322 (1051)
+.+... +..++|+++.++++++++++++++++++++++.+.. . .+| ...+..++++++++|
T Consensus 226 ~~v~~~--~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~--~----~~~-----------~~~~~~~v~llv~ai 286 (884)
T TIGR01522 226 KMMQAI--EKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQ--G----KDW-----------LEMFTISVSLAVAAI 286 (884)
T ss_pred HHhccC--CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--c----CCH-----------HHHHHHHHHHHHHHc
Confidence 998876 677899999999999998876655554444443211 0 122 345677889999999
Q ss_pred CCchHHHHHHHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCcccceeeEeecCcccC
Q 001568 323 PEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYD 402 (1051)
Q Consensus 323 P~~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 402 (1051)
||+||++++++++.+.+||+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+. ..+...++
T Consensus 287 P~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~-----~~~~~~~~ 361 (884)
T TIGR01522 287 PEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHT-----MLNAVSLN 361 (884)
T ss_pred cchHHHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEe-----eccCCccC
Confidence 9999999999999999999999999999999999999999999999999999999999987653210 01111122
Q ss_pred CCCCCccCCC--CCCChHHHHHHHHHHhhhccCccccCCCcccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhhh
Q 001568 403 PKDGGIVDWP--CYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480 (1051)
Q Consensus 403 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~ 480 (1051)
+.+....+.. ....++....++.++++||++.....+ .+..|||+|.|+++++++.|+...
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~--~~~~g~p~e~All~~~~~~~~~~~--------------- 424 (884)
T TIGR01522 362 QFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEA--DTLLGNPTDVALIELLMKFGLDDL--------------- 424 (884)
T ss_pred CCCcccccccccccccCHHHHHHHHHHhhhCCCeecCCC--CCcCCChHHHHHHHHHHHcCcHhH---------------
Confidence 2111100000 011234456778888999987654322 234589999999999988765210
Q ss_pred cccccccccccccccccccceeEeecCCCCCceEEEEEecC-CCcEEEEEcCChhHHHhhccccccCCCceecCCHHHHH
Q 001568 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREP-TGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQ 559 (1051)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~-~~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~ 559 (1051)
...++.++++||+|+||||+++++.. ++++++++|||||.++..|++....+|...+++++.++
T Consensus 425 ---------------~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~ 489 (884)
T TIGR01522 425 ---------------RETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRD 489 (884)
T ss_pred ---------------HhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHH
Confidence 23467889999999999999998763 56789999999999999999877667888889999999
Q ss_pred HHHHHHHHHhhccceEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChhHHHHHHHHHh
Q 001568 560 LMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRG 639 (1051)
Q Consensus 560 ~~~~~~~~~a~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~ 639 (1051)
.+.+.+++++++|+|++++||+.+ +.+++|+|+++++||+|++++++|+.|++
T Consensus 490 ~i~~~~~~~a~~G~rvl~~A~~~~---------------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~ 542 (884)
T TIGR01522 490 VIQEEAAEMASAGLRVIAFASGPE---------------------------KGQLTFLGLVGINDPPRPGVKEAVTTLIT 542 (884)
T ss_pred HHHHHHHHHHhcCCEEEEEEEEcC---------------------------CCCeEEEEEEeccCcchhHHHHHHHHHHH
Confidence 999999999999999999999854 35799999999999999999999999999
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCchhHHHHHHHHhhc
Q 001568 640 AGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEM 719 (1051)
Q Consensus 640 ~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~ 719 (1051)
+|++++|+|||++.||.++|+++||.... ..+++|++++.+.++++.+.+. +..||||++|+||.++|+.+|++
T Consensus 543 ~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~----~~~v~g~~l~~~~~~~l~~~~~--~~~Vfar~~P~~K~~iv~~lq~~ 616 (884)
T TIGR01522 543 GGVRIIMITGDSQETAVSIARRLGMPSKT----SQSVSGEKLDAMDDQQLSQIVP--KVAVFARASPEHKMKIVKALQKR 616 (884)
T ss_pred CCCeEEEECCCCHHHHHHHHHHcCCCCCC----CceeEhHHhHhCCHHHHHHHhh--cCeEEEECCHHHHHHHHHHHHHC
Confidence 99999999999999999999999997643 3468999999999999999888 78899999999999999999999
Q ss_pred CCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 001568 720 GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVI 799 (1051)
Q Consensus 720 g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~n~~~~~ 799 (1051)
|++|+|+|||.||+||+++||||||||.+|+++++++||+++.+|+|..+++++++||+++.|+++++.|.++.|+..++
T Consensus 617 g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~ 696 (884)
T TIGR01522 617 GDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALS 696 (884)
T ss_pred CCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 99999999999999999999999999978999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHhhhhhhhccCCCCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 001568 800 SIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFV 879 (1051)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (1051)
+.+++.+++.|.|++++|++|+|++++.+|+++|+++||++++|++||+.++++++++.++..++++|+++.+.+++.+.
T Consensus 697 ~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 776 (884)
T TIGR01522 697 LIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFV 776 (884)
T ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99889999999999999999999999999999999999999999999999999999999888888888887655443322
Q ss_pred HHHhhcccccccccCCCCcccccccccccCccCCCCCccccccccCCCcccccCCCCccccccccchhHHHHHHHHHHHH
Q 001568 880 LWYTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEM 959 (1051)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~t~~f~~lv~~q~ 959 (1051)
+. ... + .....++|++|++|+++|+
T Consensus 777 ~~-~~~----------~--------------------------------------------~~~~~~~t~~f~~~v~~q~ 801 (884)
T TIGR01522 777 RE-MQD----------G--------------------------------------------VITARDTTMTFTCFVFFDM 801 (884)
T ss_pred HH-HcC----------C--------------------------------------------cchhhHHHHHHHHHHHHHH
Confidence 11 000 0 0013468999999999999
Q ss_pred HHhhhccccCCCccccCCCCChHHHHHHHHHHHHHHHHHhccccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHhh
Q 001568 960 FNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLVILVSAPVILIDEVLKFVGR 1039 (1051)
Q Consensus 960 ~~~~~~~~~~~s~~~~~~~~N~~~~~~i~~~~~l~~~i~~vp~~~~~f~~~~l~~~~w~~~l~~~~~~l~i~e~~K~~~R 1039 (1051)
||.++||+++.+.|+.++++|++++++++++++++++++|+|+++.+|++.|+++.+|+++++++++.++++|++|+++|
T Consensus 802 ~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~ 881 (884)
T TIGR01522 802 FNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVER 881 (884)
T ss_pred HHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999888888888899999999999999999999999999999999999999999999999999999999999876
Q ss_pred cc
Q 001568 1040 NR 1041 (1051)
Q Consensus 1040 ~~ 1041 (1051)
+.
T Consensus 882 ~~ 883 (884)
T TIGR01522 882 SR 883 (884)
T ss_pred hc
Confidence 53
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-137 Score=1271.06 Aligned_cols=885 Identities=41% Similarity=0.617 Sum_probs=766.7
Q ss_pred CcccccCCHH--HHHHHcCCCCCCCCCHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHhh
Q 001568 5 PFPAWSWTVE--QCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYF 82 (1051)
Q Consensus 5 ~~~~~~~~~~--~~~~~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~ils~~~~~~ 82 (1051)
...||..+.+ ++...+.++...||+++|+.+|+++||.|+++..+..++|+.++.||+++++++++++++++++++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~ 99 (917)
T COG0474 20 SETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDW 99 (917)
T ss_pred cccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4467999999 99999999999999999999999999999999999999999999999999999999999999988754
Q ss_pred cCCCCCCCCccccchhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCceeEEEECCeeceEeeCCCccCCcEEEeCCC
Q 001568 83 HSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVG 162 (1051)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~~I~~~~Lv~GDII~l~~G 162 (1051)
... . ....+++.+++++.+++++||+++++.+++++++.+.+++|+|||++ ++|+++||||||||.|++|
T Consensus 100 ~~~--------~-~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~-~~i~a~eLVpGDiV~l~~g 169 (917)
T COG0474 100 VDA--------G-VDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKF-VEIPASELVPGDIVLLEAG 169 (917)
T ss_pred ccc--------C-cceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcE-EEecHHHCCCCcEEEECCC
Confidence 320 0 34456777888899999999999999999999999999999999999 9999999999999999999
Q ss_pred CcccccEEEEEecCCceEEeccCCCCCCcccccCCCCCCCCccccc-ccccEEEeccEEEeceEEEEEEEeccchhhhHH
Q 001568 163 DKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQ-AKENMVFAGTTVVNGSCVCIVINTGMNTEIGKI 241 (1051)
Q Consensus 163 ~~vPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~-~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i 241 (1051)
|+||||++|++ +.+++||||+|||||.|+.|.+.+....+.+.. ++.|++|+||.+++|++.|+|++||.+|++|++
T Consensus 170 d~vPAD~rLl~--~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~i 247 (917)
T COG0474 170 DVVPADLRLLE--SSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKI 247 (917)
T ss_pred CccccceEEEE--ecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHH
Confidence 99999999997 444799999999999999999876665555565 889999999999999999999999999999999
Q ss_pred HHHHhhccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhHHHHHHHHHHHHHHh
Q 001568 242 QKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAA 321 (1051)
Q Consensus 242 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~ 321 (1051)
++.+... ....+|+++.++++...+..+++++++++++..+.... .+| ...+..++++++++
T Consensus 248 a~~~~~~--~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~-----~~~-----------~~~~~~~v~l~va~ 309 (917)
T COG0474 248 ARLLPTK--KEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGG-----NGL-----------LESFLTALALAVAA 309 (917)
T ss_pred HHhhccc--cccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----ccH-----------HHHHHHHHHHHHhc
Confidence 9998875 57889999999999999999999888888887643211 112 45688899999999
Q ss_pred cCCchHHHHHHHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCcccceeeEeecCccc
Q 001568 322 IPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTY 401 (1051)
Q Consensus 322 iP~~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 401 (1051)
+|++||+.++++++.++++|+++++++|+++++|+||++|+||+|||||||+|+|+|++++..+.. ...
T Consensus 310 IPegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~-----------~~~ 378 (917)
T COG0474 310 VPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGG-----------KDI 378 (917)
T ss_pred cccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCc-----------ccc
Confidence 999999999999999999999999999999999999999999999999999999999999987410 000
Q ss_pred CCCCCCccCCCCCCChHHHHHHHHHHhhhccCccccCCCcccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhhhc
Q 001568 402 DPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYL 481 (1051)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~ 481 (1051)
++ ...........++..+++||+.....+ + ++..|||+|.||++++++.|+.. .
T Consensus 379 ~~--------~~~~~~~~~~~~l~~~~lc~~~~~~~~-~-~~~~gdptE~Al~~~a~~~~~~~-~--------------- 432 (917)
T COG0474 379 DD--------KDLKDSPALLRFLLAAALCNSVTPEKN-G-WYQAGDPTEGALVEFAEKLGFSL-D--------------- 432 (917)
T ss_pred cc--------cccccchHHHHHHHHHHhcCccccccc-C-ceecCCccHHHHHHHHHhcCCcC-C---------------
Confidence 00 001223445578888999999887766 5 88899999999999999988632 0
Q ss_pred ccccccccccccccccccceeEeecCCCCCceEEEEEecCCCcEEEEEcCChhHHHhhccccccCCCceecCCHHHHHHH
Q 001568 482 IDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLM 561 (1051)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~~~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~ 561 (1051)
.......++++.++||+|+|||||++++..++++.+++|||||.|+++|++. +...+++++.++.+
T Consensus 433 ----------~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~----~~~~~~~~~~~~~~ 498 (917)
T COG0474 433 ----------LSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI----GELEPLTEEGLRTL 498 (917)
T ss_pred ----------HHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhccc----CcccccCHHHHHHH
Confidence 0112356688999999999999999999777779999999999999999875 66778999999999
Q ss_pred HHHHHHHhhccceEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChhHHHHHHHHHhCC
Q 001568 562 LSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAG 641 (1051)
Q Consensus 562 ~~~~~~~a~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~~g 641 (1051)
.+..++|+++||||+++|||..+.+.. .... +++|+|++|+|+++|+||||++++++|+.|++||
T Consensus 499 ~~~~~~la~~glRvla~A~k~~~~~~~--------------~~~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AG 563 (917)
T COG0474 499 EEAVKELASEGLRVLAVAYKKLDRAEK--------------DDEV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAG 563 (917)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCcccc--------------cchh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCC
Confidence 999999999999999999996653211 1111 5678999999999999999999999999999999
Q ss_pred cEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCchhHHHHHHHHhhcCC
Q 001568 642 IEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGE 721 (1051)
Q Consensus 642 i~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~ 721 (1051)
|++||+||||..||.+||++||+...... ..+++|.+++.++++++.+.+. +..||||++|+||.++|+.+|++|+
T Consensus 564 I~v~MiTGD~~~TA~aIa~~~Gi~~~~~~--~~vi~G~el~~l~~~el~~~~~--~~~VfARvsP~qK~~IV~~lq~~g~ 639 (917)
T COG0474 564 IKVWMITGDHVETAIAIAKECGIEAEAES--ALVIDGAELDALSDEELAELVE--ELSVFARVSPEQKARIVEALQKSGH 639 (917)
T ss_pred CcEEEECCCCHHHHHHHHHHcCCCCCCCc--eeEeehHHhhhcCHHHHHHHhh--hCcEEEEcCHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999765432 4599999999999999999999 4459999999999999999999999
Q ss_pred EEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 001568 722 VVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISI 801 (1051)
Q Consensus 722 ~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~n~~~~~~~ 801 (1051)
+|+|+|||+||+||||+||||||||.+|+|+|+++||+++.+++|..+..+++|||++|.|+++++.|.+++|+..++.+
T Consensus 640 vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~ 719 (917)
T COG0474 640 VVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTL 719 (917)
T ss_pred EEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCC-CchhHHHHHHHHHHHhhhhhhhccCCCCCcccccCCCCCCCCCCcchHHHHHHHHH-HHHHHHHHHHHHH
Q 001568 802 FLTAALGIP-ECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVI-GSYVGIATVGIFV 879 (1051)
Q Consensus 802 ~~~~~~~~~-~~~~~~~~l~~n~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 879 (1051)
+++.+++.+ .|++++|++|+|++++++|+++++.++++.+.|++||+++.+++++++.++++++. |...++..++.|.
T Consensus 720 ~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~ 799 (917)
T COG0474 720 LIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFL 799 (917)
T ss_pred HHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998887 89999999999999999999999999999999999999999999999999996665 4444444443333
Q ss_pred HHHhhcccccccccCCCCcccccccccccCccCCCCCccccccccCCCcccccCCCCccccccccchhHHHHHHHHHHHH
Q 001568 880 LWYTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEM 959 (1051)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~t~~f~~lv~~q~ 959 (1051)
+++... . ..+. .. .......+|++|+.++++|.
T Consensus 800 ~~~~~~---------~----------------~~~~---------------------~~-~~~~~~~~t~~f~~~~~~~~ 832 (917)
T COG0474 800 LYLLGF---------I----------------ANTL---------------------GL-DLFQALLQTTAFTVLVLIQL 832 (917)
T ss_pred HHHHhc---------c----------------cccc---------------------ch-hhHHHHHHHHHHHHHHHHHH
Confidence 333211 0 0000 00 00134578999999999999
Q ss_pred HHhhhccccCCCccccCCCCChHHHHHHHHHHHHHHHHHhccccc-cccccccCChhhHHHHHHHHHHHH--HHHHHHHH
Q 001568 960 FNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLA-DVFGVVPLNLNEWFLVILVSAPVI--LIDEVLKF 1036 (1051)
Q Consensus 960 ~~~~~~~~~~~s~~~~~~~~N~~~~~~i~~~~~l~~~i~~vp~~~-~~f~~~~l~~~~w~~~l~~~~~~l--~i~e~~K~ 1036 (1051)
++.+.+|+...+++...++.|+.++.++++.+++++.+.|+|+.. ..|...+++..+|++++++....+ ...+..|.
T Consensus 833 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (917)
T COG0474 833 LLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLIAIAVALLLLYIVVSELYKL 912 (917)
T ss_pred HHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888888888999999999999999999999999999 799999999999999888874443 34444443
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-134 Score=1254.04 Aligned_cols=912 Identities=59% Similarity=0.931 Sum_probs=756.5
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccchhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCceeEE
Q 001568 57 VLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKV 136 (1051)
Q Consensus 57 l~~~f~~~~~~~ll~~~ils~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~~~~V 136 (1051)
+++||+++++++|++++++|+++++++. +......|+++++++++++++..++.|||+++++.+++|+++.+.+++|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~---~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~V 77 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEE---GEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKV 77 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccc---cccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEE
Confidence 4789999999999999999999876642 1123357899999999999999999999999999999999999999999
Q ss_pred EECCeeceEeeCCCccCCcEEEeCCCCcccccEEEEEecCCceEEeccCCCCCCcccccCCCCCCCCcccccccccEEEe
Q 001568 137 LRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFA 216 (1051)
Q Consensus 137 ~r~g~~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~~l~a 216 (1051)
+|||++ ++|+++||||||||.|++||+|||||++++ ++++.||||+|||||.|+.|.+++..+++....+++|++|+
T Consensus 78 iRdg~~-~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~--~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~ 154 (917)
T TIGR01116 78 LRDGRW-SVIKAKDLVPGDIVELAVGDKVPADIRVLS--LKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFS 154 (917)
T ss_pred EECCEE-EEEEHHHCCCCCEEEECCCCEeeccEEEEE--ecceEEEcccccCCCCcccccccccCccccCcccccceeee
Confidence 999999 999999999999999999999999999997 45799999999999999999886554444455677899999
Q ss_pred ccEEEeceEEEEEEEeccchhhhHHHHHHhhccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCC
Q 001568 217 GTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGW 296 (1051)
Q Consensus 217 Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1051)
||.+.+|+++++|++||.+|++|++.+.+..+ +.+++|+++++++++..++.+++++++++|++....+.......+|
T Consensus 155 GT~v~~G~~~~~V~~tG~~T~~gki~~~~~~~--~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 232 (917)
T TIGR01116 155 GTLVVAGKARGVVVRTGMSTEIGKIRDEMRAA--EQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGW 232 (917)
T ss_pred CCEEecceEEEEEEEeCCCCHHHHHHHHhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 99999999999999999999999999988876 7788999999999999998877777777766543322111111123
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCe
Q 001568 297 PANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQM 376 (1051)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m 376 (1051)
+..+...+..++++++++||++||+++++++++++++|+++++++|+++++|+||++|+||||||||||+|+|
T Consensus 233 -------~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m 305 (917)
T TIGR01116 233 -------IQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQM 305 (917)
T ss_pred -------HHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeE
Confidence 2334556667888999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCcccceeeEeecCcccCCCCCCccCCCC--CCChHHHHHHHHHHhhhccCccccCC--CcccccCCchHHH
Q 001568 377 SVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPC--YNMDANLQAMAKICAVCNDAGVYCDG--PLFRATGLPTEAA 452 (1051)
Q Consensus 377 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~c~~~~~~~~~--~~~~~~~~p~e~a 452 (1051)
+|.+++..+..+.....+..++..++|.+....+... ...++....++.++++||++.+..++ ..+...|+|+|.|
T Consensus 306 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~A 385 (917)
T TIGR01116 306 SVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAA 385 (917)
T ss_pred EEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHH
Confidence 9999998764332223344555566654332111100 11234566788899999998765422 2244569999999
Q ss_pred HHHHHHHcCCCCCCCCcccchhhhhhhhcccccccccccccccccccceeEeecCCCCCceEEEEEecCCCcEEEEEcCC
Q 001568 453 LKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGS 532 (1051)
Q Consensus 453 l~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~~~~~~~~~KGa 532 (1051)
|++++++.|++....+....... ..+.....++.|++++++||+|+|||||++++. ++++.+|+|||
T Consensus 386 Ll~~~~~~g~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGA 452 (917)
T TIGR01116 386 LKVLVEKMGLPATKNGVSSKRRP------------ALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGA 452 (917)
T ss_pred HHHHHHHcCCCchhccccccccc------------ccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCC
Confidence 99999998876542211000000 000111124568899999999999999999985 46789999999
Q ss_pred hhHHHhhccccccCCCceecCCHHHHHHHHHHHHHHhh-ccceEEEEEEeccccccccccccCcccccccCCCccccccC
Q 001568 533 VESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSS-KGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIE 611 (1051)
Q Consensus 533 ~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~-~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie 611 (1051)
||.|+++|+++...+|...|++++.++++.+++++|++ +|+||+++|||.++.+.... ...+...++.+|
T Consensus 453 pe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~---------~~~~~~~~~~~e 523 (917)
T TIGR01116 453 PEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREED---------LLSDPANFEAIE 523 (917)
T ss_pred hHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCcccccc---------ccccchhhhhhc
Confidence 99999999988776788899999999999999999999 99999999999876431110 001122345678
Q ss_pred CCeEEEEEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHH
Q 001568 612 SDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIE 691 (1051)
Q Consensus 612 ~~l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~ 691 (1051)
+|++|+|+++++||+|++++++|+.|+++||+++|+|||+..||.++|+++|+..++.++....++|.+++.+.+++..+
T Consensus 524 ~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~ 603 (917)
T TIGR01116 524 SDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRA 603 (917)
T ss_pred CCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999876555445678999999999888877
Q ss_pred HHHhcCCeEEEEeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHH
Q 001568 692 ALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVS 771 (1051)
Q Consensus 692 ~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~ 771 (1051)
... +..||||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||||| +|++.++++||+++.+|+|.++++
T Consensus 604 ~~~--~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~ 680 (917)
T TIGR01116 604 ACR--SAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVA 680 (917)
T ss_pred hhh--cCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHH
Confidence 776 78899999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhhhhccCCCCCcccccCCCCCCC
Q 001568 772 AVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKID 851 (1051)
Q Consensus 772 ~i~~gR~~~~~i~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~l~l~~~~~~~~~~~~~p~~~~ 851 (1051)
+++|||++|.|+++++.|.+++|+..+++.+++.+++.|.|++++|++|+|++++.+|++++++++|++++|++||+.++
T Consensus 681 ~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~ 760 (917)
T TIGR01116 681 AVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPD 760 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCcccccccccccCccCCCCCccccccccCCCcccc
Q 001568 852 DALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMIT 931 (1051)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 931 (1051)
+++++++++++|++.|+++++.+++.|.+++....+++.+ +.....|....
T Consensus 761 ~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~---------------- 811 (917)
T TIGR01116 761 EPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCD-------------EDSFTTCPDFE---------------- 811 (917)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccc-------------ccccccccccc----------------
Confidence 9999999999999999999988666554433211010000 00000111000
Q ss_pred cCCCCccccccccchhHHHHHHHHHHHHHHhhhccccCCCccccCCCCChHHHHHHHHHHHHHHHHHhcccccccccccc
Q 001568 932 FSNPCDYFTIGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVP 1011 (1051)
Q Consensus 932 ~~~~~~~~~~~~~~a~t~~f~~lv~~q~~~~~~~~~~~~s~~~~~~~~N~~~~~~i~~~~~l~~~i~~vp~~~~~f~~~~ 1011 (1051)
..+.....+...++|++|++|+++|++|.++||+++.++|..++|+|++++++++++++++++++|+|+++.+|++.|
T Consensus 812 --~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~v~~~~~~f~~~~ 889 (917)
T TIGR01116 812 --DPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLILYVPFLSRIFGVTP 889 (917)
T ss_pred --cccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHHHHHHhHHHHHHhccCC
Confidence 000000112345789999999999999999999988888888889999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhh
Q 001568 1012 LNLNEWFLVILVSAPVILIDEVLKFVGR 1039 (1051)
Q Consensus 1012 l~~~~w~~~l~~~~~~l~i~e~~K~~~R 1039 (1051)
+++.+|+++++++++.++++|++|+++|
T Consensus 890 l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 890 LSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999998864
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-133 Score=1254.91 Aligned_cols=891 Identities=31% Similarity=0.456 Sum_probs=744.5
Q ss_pred CHHHHHHHcCCCCCCCCC--HHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 001568 12 TVEQCLKEYNVKLDKGLS--SREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGD 89 (1051)
Q Consensus 12 ~~~~~~~~l~~~~~~GLs--~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~ils~~~~~~~~~~~~~ 89 (1051)
+++++++.|+++.++||| ++||++|+++||+|+++.++++++|+++++||+++++++|+++++++++++++.+..++.
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 789999999999999999 999999999999999999999999999999999999999999999999987653211123
Q ss_pred CCccccchhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhh-cCceeEEEECCeeceEeeCCCccCCcEEEeCCCCccccc
Q 001568 90 SGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKI-QCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPAD 168 (1051)
Q Consensus 90 ~~~~~~~~~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~-~~~~~~V~r~g~~~~~I~~~~Lv~GDII~l~~G~~vPaD 168 (1051)
++...|+++++++++++++.+++.++|+++++.++++++. .+.+++|+|||++ ++|+++||||||+|.|++||+||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~-~~I~~~~Lv~GDiV~l~~Gd~IPaD 201 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQE-QQISIHDIVVGDIVSLSTGDVVPAD 201 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEE-EEEeHHHCCCCCEEEECCCCEeccc
Confidence 3445788999999999999999999999999999999864 4678999999999 9999999999999999999999999
Q ss_pred EEEEEecCCceEEeccCCCCCCcccccCCCCCCCCcccccccccEEEeccEEEeceEEEEEEEeccchhhhHHHHHHhhc
Q 001568 169 MRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDA 248 (1051)
Q Consensus 169 ~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 248 (1051)
|+|++ ++++.||||+|||||.|+.|.++ +.|++|+||.+.+|+++++|++||.+|.+|++.+.+..+
T Consensus 202 ~~li~--g~~l~VdES~LTGES~pv~K~~~-----------~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~ 268 (941)
T TIGR01517 202 GVFIS--GLSLEIDESSITGESDPIKKGAP-----------KDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAE 268 (941)
T ss_pred EEEEE--cCcEEEEecccCCCCCcccccCC-----------CCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccC
Confidence 99996 34899999999999999999864 247999999999999999999999999999999988765
Q ss_pred cccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhHHHHHHHHHHHHHHhcCCchHH
Q 001568 249 SLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPA 328 (1051)
Q Consensus 249 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~ 328 (1051)
+ +++|++++++++++++..++++++++++++++..+.......+... .......+...+..++++++++|||+||+
T Consensus 269 --~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~al~llv~~iP~~Lp~ 344 (941)
T TIGR01517 269 --G-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRD-TEEDAQTFLDHFIIAVTIVVVAVPEGLPL 344 (941)
T ss_pred --C-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc-cchhhHHHHHHHHHHHHHHHhhCCCchHH
Confidence 3 5679999999999999887777666665544321100000000000 00011234556788899999999999999
Q ss_pred HHHHHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCcccceeeEeecCcccCCCCCCc
Q 001568 329 VITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGI 408 (1051)
Q Consensus 329 ~~~~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (1051)
+++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|++++..+..+ ..++.
T Consensus 345 ~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~------~~~~~--------- 409 (941)
T TIGR01517 345 AVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRF------NVRDV--------- 409 (941)
T ss_pred HHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceE------ecCcc---------
Confidence 999999999999999999999999999999999999999999999999999998654211 11000
Q ss_pred cCCCCCCChHHHHHHHHHHhhhccCcccc-C-CCcccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhhhcccccc
Q 001568 409 VDWPCYNMDANLQAMAKICAVCNDAGVYC-D-GPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSST 486 (1051)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~-~-~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (1051)
. ...+.....++..++.||+..... + .+..+..|||+|.|+++++++.|.+..
T Consensus 410 ~----~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~--------------------- 464 (941)
T TIGR01517 410 L----RNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQ--------------------- 464 (941)
T ss_pred c----ccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHH---------------------
Confidence 0 001122344444455555443321 1 222356799999999999987764321
Q ss_pred cccccccccccccceeEeecCCCCCceEEEEEecCCCcEEEEEcCChhHHHhhccccccCCCceecCCHHHHHHHHHHHH
Q 001568 487 VRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHL 566 (1051)
Q Consensus 487 ~~~~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~~~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~ 566 (1051)
.....+++++.+||+|+||+|+++++..++++++++|||||.++++|++....+|...++++ .++.+.+.++
T Consensus 465 -------~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~ 536 (941)
T TIGR01517 465 -------EVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIE 536 (941)
T ss_pred -------HHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHH
Confidence 01234567889999999999999999777778999999999999999976555777778887 7888999999
Q ss_pred HHhhccceEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChhHHHHHHHHHhCCcEEEE
Q 001568 567 EMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMV 646 (1051)
Q Consensus 567 ~~a~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~ 646 (1051)
+++++|+||+++|||.++.+... ..+..|+|++|+|+++++||+|++++++|+.|+++||+++|
T Consensus 537 ~~a~~G~Rvl~~A~~~~~~~~~~----------------~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~m 600 (941)
T TIGR01517 537 PLASDALRTICLAYRDFAPEEFP----------------RKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRM 600 (941)
T ss_pred HHHhcCCEEEEEEEEecCccccc----------------cccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEE
Confidence 99999999999999987532100 01223789999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCchhHHHHHHHHhhcCCEEEEE
Q 001568 647 ITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMT 726 (1051)
Q Consensus 647 ~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~i 726 (1051)
+|||++.||.++|+++||.++. ..+++|++++.+.+++..+.+. +..||||++|+||.++|+.+|++|++|+|+
T Consensus 601 iTGD~~~tA~~iA~~~GI~~~~----~~vi~G~~~~~l~~~el~~~i~--~~~Vfar~sPe~K~~iV~~lq~~g~vVam~ 674 (941)
T TIGR01517 601 VTGDNIDTAKAIARNCGILTFG----GLAMEGKEFRRLVYEEMDPILP--KLRVLARSSPLDKQLLVLMLKDMGEVVAVT 674 (941)
T ss_pred ECCCChHHHHHHHHHcCCCCCC----ceEeeHHHhhhCCHHHHHHHhc--cCeEEEECCHHHHHHHHHHHHHCCCEEEEE
Confidence 9999999999999999998653 3589999999999999999888 778999999999999999999999999999
Q ss_pred cCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001568 727 GDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAA 806 (1051)
Q Consensus 727 GDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~n~~~~~~~~~~~~ 806 (1051)
|||.||+|||++||||||||++|+|+|+++||+++++|+|.++++++++||+++.|+++++.|.+++|+..+++.+++.+
T Consensus 675 GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~ 754 (941)
T TIGR01517 675 GDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSC 754 (941)
T ss_pred CCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hcCCCchhHHHHHHHHHHHhhhhhhhccCCCCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 001568 807 LGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGS 886 (1051)
Q Consensus 807 ~~~~~~~~~~~~l~~n~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 886 (1051)
++.++|++++|++|+|+++|.+|++++++++|++++|++||+.++++++++.++.+++++|+++++.++..+++.. .
T Consensus 755 ~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~--~- 831 (941)
T TIGR01517 755 ISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGG--S- 831 (941)
T ss_pred HhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH--h-
Confidence 8889999999999999999999999999999999999999999999999998888899999887776554432211 1
Q ss_pred cccccccCCCCcccccccccccCccCCCCCccccccccCCCcccccCCCCccccccccchhHHHHHHHHHHHHHHhhhcc
Q 001568 887 FMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMFNSLNAL 966 (1051)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~t~~f~~lv~~q~~~~~~~~ 966 (1051)
+++.. + ...| .+ .....++|++|++|+++|++|.+++|
T Consensus 832 ~~~~~--~-------------~~~~-------------------------~~--~~~~~~~t~~f~~~v~~~~~~~~~~r 869 (941)
T TIGR01517 832 IFDVS--G-------------PDEI-------------------------TS--HQQGELNTIVFNTFVLLQLFNEINAR 869 (941)
T ss_pred hhccc--C-------------cccc-------------------------cc--cccchhhHHHHHHHHHHHHHHHHHHc
Confidence 11000 0 0000 00 01235789999999999999999999
Q ss_pred ccCC-CccccCCCCChHHHHHHHHHHHHHHHHHhccccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHh
Q 001568 967 SEDN-SLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLVILVSAPVILIDEVLKFVG 1038 (1051)
Q Consensus 967 ~~~~-s~~~~~~~~N~~~~~~i~~~~~l~~~i~~vp~~~~~f~~~~l~~~~w~~~l~~~~~~l~i~e~~K~~~ 1038 (1051)
+.+. ++|+ ++++|++++.++++.+++++ +++|+++.+|++.|+++.+|+++++++++.+++.|++|++.
T Consensus 870 ~~~~~~~~~-~~~~n~~~~~~~~~~~~l~~--~~~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~ 939 (941)
T TIGR01517 870 KLYERNVFE-GLFKNRIFVTIMGFTFGFQV--IIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIP 939 (941)
T ss_pred cCCcccccc-cccccHHHHHHHHHHHHHHH--HHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 8765 4454 88999999999999888885 56778999999999999999999999999999999999873
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-130 Score=1212.15 Aligned_cols=855 Identities=27% Similarity=0.426 Sum_probs=717.7
Q ss_pred cccccCCHHHHHHHcCCCCCCCCCHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhcCC
Q 001568 6 FPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSS 85 (1051)
Q Consensus 6 ~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~ils~~~~~~~~~ 85 (1051)
+..|..+.+++++.|+++. +|||++|+++|+++||+|+++.++++++|+.+++||++++.++++++++++++++.+...
T Consensus 25 ~~~~~~~~~~v~~~l~~~~-~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~ 103 (903)
T PRK15122 25 AREAANSLEETLANLNTHR-QGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPL 103 (903)
T ss_pred HHHHhCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhc
Confidence 3468889999999999994 899999999999999999999998889999999999999999999999999998755321
Q ss_pred CCCCCCccccchhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCceeEEEECC------eeceEeeCCCccCCcEEEe
Q 001568 86 DSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDG------YLVPDLPAIGLVPGDIVEL 159 (1051)
Q Consensus 86 ~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r~g------~~~~~I~~~~Lv~GDII~l 159 (1051)
.......|.++++++++++++.+++++||+++++++++|+++.+.+++|+||| ++ ++|+++||||||+|.|
T Consensus 104 --~~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~-~~I~~~eLv~GDiV~l 180 (903)
T PRK15122 104 --RRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVR-REIPMRELVPGDIVHL 180 (903)
T ss_pred --cCCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeE-EEEEHHHCCCCCEEEE
Confidence 00112367889999999999999999999999999999999999999999994 77 8999999999999999
Q ss_pred CCCCcccccEEEEEecCCceEEeccCCCCCCcccccCCCC----------CCCCcccccccccEEEeccEEEeceEEEEE
Q 001568 160 GVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSP----------VFLDDCELQAKENMVFAGTTVVNGSCVCIV 229 (1051)
Q Consensus 160 ~~G~~vPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~----------~~~~~~~~~~~~~~l~aGt~v~~g~~~~~V 229 (1051)
++||+|||||+|++ ++++.||||+|||||.|+.|.+.+ ...++.+..+++|++|+||.|.+|+++++|
T Consensus 181 ~~Gd~IPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V 258 (903)
T PRK15122 181 SAGDMIPADVRLIE--SRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVV 258 (903)
T ss_pred CCCCEEeeeEEEEE--cCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEE
Confidence 99999999999996 567899999999999999998621 112234556778999999999999999999
Q ss_pred EEeccchhhhHHHHHHhhccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhHHH
Q 001568 230 INTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTY 309 (1051)
Q Consensus 230 ~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (1051)
++||.+|.+|++.+++.. ...++|+++.++++.+.+..+++.++.+++++..... .+| ..
T Consensus 259 ~atG~~T~~gkI~~~v~~---~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~------~~~-----------~~ 318 (903)
T PRK15122 259 VATGSRTYFGSLAKSIVG---TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTK------GDW-----------LE 318 (903)
T ss_pred EEeccccHhhHHHHHhcC---CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc------CCH-----------HH
Confidence 999999999999998865 4467899999999998887766666655554432211 122 44
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCccc
Q 001568 310 YFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTT 389 (1051)
Q Consensus 310 ~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~ 389 (1051)
.+..++++++++|||+||++++++++.++++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..+.
T Consensus 319 ~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~--- 395 (903)
T PRK15122 319 ALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSG--- 395 (903)
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCC---
Confidence 56778999999999999999999999999999999999999999999999999999999999999999998764321
Q ss_pred ceeeEeecCcccCCCCCCccCCCCCCChHHHHHHHHHHhhhccCccccCCCcccccCCchHHHHHHHHHHcCCCCCCCCc
Q 001568 390 ISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRN 469 (1051)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~ 469 (1051)
..++ +++..+++|+.. + ...+||+|.|+++++.+.+...
T Consensus 396 -------------------------~~~~---~~l~~a~l~s~~----~----~~~~~p~e~All~~a~~~~~~~----- 434 (903)
T PRK15122 396 -------------------------RKDE---RVLQLAWLNSFH----Q----SGMKNLMDQAVVAFAEGNPEIV----- 434 (903)
T ss_pred -------------------------CChH---HHHHHHHHhCCC----C----CCCCChHHHHHHHHHHHcCchh-----
Confidence 0011 223333333211 0 1258999999999998755311
Q ss_pred ccchhhhhhhhcccccccccccccccccccceeEeecCCCCCceEEEEEecCCCcEEEEEcCChhHHHhhccccccCCCc
Q 001568 470 KISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGS 549 (1051)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~~~~~~~~~KGa~e~i~~~c~~~~~~~~~ 549 (1051)
....|+.+.++||++.||+|+++++..++++++++|||||.++++|++.. .+|.
T Consensus 435 -------------------------~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~ 488 (903)
T PRK15122 435 -------------------------KPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVR-DGDT 488 (903)
T ss_pred -------------------------hhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhh-cCCC
Confidence 01346778899999999999999987778889999999999999999765 3677
Q ss_pred eecCCHHHHHHHHHHHHHHhhccceEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChh
Q 001568 550 VVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGG 629 (1051)
Q Consensus 550 ~~~l~~~~~~~~~~~~~~~a~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~ 629 (1051)
..+++++.++++.+..++++++|+|++++|||.++.+... +...+..|+|++|+|+++++||+|++
T Consensus 489 ~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~--------------~~~~~~~e~~l~~lGli~l~Dp~R~~ 554 (903)
T PRK15122 489 VRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESR--------------AQYSTADERDLVIRGFLTFLDPPKES 554 (903)
T ss_pred eecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccc--------------cccccccccCcEEEEEEeccCccHHH
Confidence 7889999999999999999999999999999987532100 00112247899999999999999999
Q ss_pred HHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCchhH
Q 001568 630 VDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHK 709 (1051)
Q Consensus 630 ~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p~~K 709 (1051)
++++|++|+++||+++|+||||+.||.++|+++||.. +.+++|.+++.++++++.+.+. +..||||++|+||
T Consensus 555 a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~------~~vi~G~el~~~~~~el~~~v~--~~~VfAr~sPe~K 626 (903)
T PRK15122 555 AAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP------GEPLLGTEIEAMDDAALAREVE--ERTVFAKLTPLQK 626 (903)
T ss_pred HHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC------CCccchHhhhhCCHHHHHHHhh--hCCEEEEeCHHHH
Confidence 9999999999999999999999999999999999953 3589999999999999999988 6779999999999
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHHHHHHHhHHHHHHH
Q 001568 710 QEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRY 789 (1051)
Q Consensus 710 ~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~ 789 (1051)
.++|+.+|++|++|+|+|||.||+|||++|||||||| +|+|+|+++||+++++|+|..+++++++||++|.|+++++.|
T Consensus 627 ~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~ 705 (903)
T PRK15122 627 SRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNM 705 (903)
T ss_pred HHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhhhhccCCCCCcccccCCCCCCCCCCcchHHHHHHHHHHHH
Q 001568 790 MISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSY 869 (1051)
Q Consensus 790 ~~~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 869 (1051)
.++.|+..++..++..++..+.|++|+|++|+|+++|+ |+++++++|+++++| +||++++++++++.+++ .|.+
T Consensus 706 ~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~~~~~~~~----~g~~ 779 (903)
T PRK15122 706 TASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKNIGRFMLW----IGPT 779 (903)
T ss_pred HHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhhhHHHHHH----HHHH
Confidence 99999999888888777765589999999999999995 999999999999999 99999999999985432 3333
Q ss_pred HHHHHHHHHHHHHhhcccccccccCCCCcccccccccccCccCCCCCccccccccCCCcccccCCCCccccccccchhHH
Q 001568 870 VGIATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTL 949 (1051)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~t~ 949 (1051)
.++..+..+.+++... + .+ . . ......+|.
T Consensus 780 ~~~~~~~~~~~~~~~~---~-----~~--------------------------------------~-~---~~~~~~~t~ 809 (903)
T PRK15122 780 SSIFDITTFALMWFVF---A-----AN--------------------------------------S-V---EMQALFQSG 809 (903)
T ss_pred HHHHHHHHHHHHHHHh---c-----cC--------------------------------------c-H---hhhhhhHHH
Confidence 3333222222211110 0 00 0 0 000113677
Q ss_pred HHHHHHHHHHHHhhhccccCCCccccCCCCChHHHHHHHHHHHHHHHHHhccc--cccccccccCChhhHHHHHHHHHHH
Q 001568 950 SLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPF--LADVFGVVPLNLNEWFLVILVSAPV 1027 (1051)
Q Consensus 950 ~f~~lv~~q~~~~~~~~~~~~s~~~~~~~~N~~~~~~i~~~~~l~~~i~~vp~--~~~~f~~~~l~~~~w~~~l~~~~~~ 1027 (1051)
.|.+++++|+++.+++|+++. ++|+|++.+.+++++++++++++|+|+ ++.+|++.|+++.+|+++++++++.
T Consensus 810 ~f~~l~~~q~~~~~~~R~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~ 884 (903)
T PRK15122 810 WFIEGLLSQTLVVHMLRTQKI-----PFIQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGY 884 (903)
T ss_pred HHHHHHHHHHHHHHhhCcCCC-----CcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 899999999999999998654 456788888888899999999999997 8999999999999999999999999
Q ss_pred HHHHHHHHH-Hhhc
Q 001568 1028 ILIDEVLKF-VGRN 1040 (1051)
Q Consensus 1028 l~i~e~~K~-~~R~ 1040 (1051)
+++.|+.|. +.|+
T Consensus 885 ~~~~e~~k~~~~r~ 898 (903)
T PRK15122 885 CLVAQGMKRFYIRR 898 (903)
T ss_pred HHHHHHHHHHHhhh
Confidence 999999884 4443
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-135 Score=1136.15 Aligned_cols=942 Identities=31% Similarity=0.472 Sum_probs=810.4
Q ss_pred cccccCCHHHHHHHcCCCCCCCCCHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhcCC
Q 001568 6 FPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSS 85 (1051)
Q Consensus 6 ~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~ils~~~~~~~~~ 85 (1051)
.+.|.+|++|+.++|+++..+|||.+++.+++.+.|+|.+.++|.++-|..+.+|+.+.+.+++|++++++++.+.+..+
T Consensus 37 ~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s 116 (1019)
T KOG0203|consen 37 MDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQAS 116 (1019)
T ss_pred eccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999998877654
Q ss_pred CCCCCCccccchhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCceeEEEECCeeceEeeCCCccCCcEEEeCCCCcc
Q 001568 86 DSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKV 165 (1051)
Q Consensus 86 ~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~~I~~~~Lv~GDII~l~~G~~v 165 (1051)
..++-+....+.++++..++++.....++|+.+..+.+++++++.|+.++|+|||+. +.+.++|||+||+|.++-|++|
T Consensus 117 ~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k-~~i~~eelVvGD~v~vk~GdrV 195 (1019)
T KOG0203|consen 117 TEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEK-MTINAEELVVGDLVEVKGGDRV 195 (1019)
T ss_pred cCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeeccee-EEechhhcccccceeeccCCcc
Confidence 322223345566777777778888899999999999999999999999999999998 9999999999999999999999
Q ss_pred cccEEEEEecCCceEEeccCCCCCCcccccCCCCCCCCcccccccccEEEeccEEEeceEEEEEEEeccchhhhHHHHHH
Q 001568 166 PADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQI 245 (1051)
Q Consensus 166 PaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 245 (1051)
|||+|+++ +..|+||+|+|||||.|..+++... +..+.+..|+.|.+|.+++|.++|+|++||.+|.+|+++...
T Consensus 196 PADiRiis--~~g~~vdnsslTGesEP~~~~~~~t---~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~ 270 (1019)
T KOG0203|consen 196 PADIRIIS--ATGCKVDNSSLTGESEPQTRSPEFT---HENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLA 270 (1019)
T ss_pred cceeEEEE--ecceeEeccccccccCCccCCcccc---ccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhh
Confidence 99999997 6789999999999999999987533 234478899999999999999999999999999999999877
Q ss_pred hhccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhHHHHHHHHHHHHHHhcCCc
Q 001568 246 HDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEG 325 (1051)
Q Consensus 246 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~ 325 (1051)
... ...++|++++++++..++...++++.+.+|++..... .+| ...+...++++++.+|+|
T Consensus 271 ~~~--~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~g------y~~-----------l~avv~~i~iivAnvPeG 331 (1019)
T KOG0203|consen 271 SGL--EDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILG------YEW-----------LRAVVFLIGIIVANVPEG 331 (1019)
T ss_pred ccC--CCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhc------chh-----------HHHhhhhheeEEecCcCC
Confidence 665 7889999999999999998888888877776654331 223 333444678899999999
Q ss_pred hHHHHHHHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCcccceeeEeecCcccCCCC
Q 001568 326 LPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKD 405 (1051)
Q Consensus 326 L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (1051)
|+.+++.++....+||+++++++|++.++|+||+.++||+|||||||+|.|+|.++|..+........ .+..+
T Consensus 332 L~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~-------~~~~~ 404 (1019)
T KOG0203|consen 332 LLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTT-------EDQSG 404 (1019)
T ss_pred ccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeech-------hhhhc
Confidence 99999999999999999999999999999999999999999999999999999999987632211110 01100
Q ss_pred CCccCCCCCCChHHHHHHHHHHhhhccCccccCC-----CcccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhhh
Q 001568 406 GGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDG-----PLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480 (1051)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~-----~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~ 480 (1051)
.. ....+..+..+..++.+||.+.....+ -.....|++.|.||+++++..-..
T Consensus 405 ~~-----~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~----------------- 462 (1019)
T KOG0203|consen 405 QS-----FDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGS----------------- 462 (1019)
T ss_pred cc-----ccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcch-----------------
Confidence 00 012356688899999999998765411 113457899999999998753221
Q ss_pred cccccccccccccccccccceeEeecCCCCCceEEEEEecCC---CcEEEEEcCChhHHHhhccccccCCCceecCCHHH
Q 001568 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPT---GHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPC 557 (1051)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~~---~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~ 557 (1051)
.+..++.++.+.++||+|.+|+.-.+.+.++ .+..+.+|||||.++++|+.+.. +|+..|++++.
T Consensus 463 -----------~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i-~g~e~pld~~~ 530 (1019)
T KOG0203|consen 463 -----------VMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILI-NGEEKPLDEKL 530 (1019)
T ss_pred -----------HHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceee-cCCCCCcCHHH
Confidence 1223567788999999999999888877543 56788899999999999998876 78889999999
Q ss_pred HHHHHHHHHHHhhccceEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChhHHHHHHHH
Q 001568 558 WQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDC 637 (1051)
Q Consensus 558 ~~~~~~~~~~~a~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l 637 (1051)
++.+.+.+.++...|.||++||++.++++....... .+.+..+.--.++.|+|++++-||+|..+++++..|
T Consensus 531 ~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~--------f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~C 602 (1019)
T KOG0203|consen 531 KEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQ--------FDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKC 602 (1019)
T ss_pred HHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceE--------eecCCCCCcchhccccchhhccCCCcccCchhhhhh
Confidence 999999999999999999999999887551111000 000111122368999999999999999999999999
Q ss_pred HhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCc--------------------cccccCchHHhcCCHHHHHHHHHhcC
Q 001568 638 RGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDL--------------------TGRSFTGKEFMALSSTQQIEALSKHG 697 (1051)
Q Consensus 638 ~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~--------------------~~~~~~g~~~~~l~~~~~~~~~~~~~ 697 (1051)
|.|||+++|+|||++.||+++|++.||....... ...+++|.|+..++++++++++..+.
T Consensus 603 rsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~ 682 (1019)
T KOG0203|consen 603 RSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQ 682 (1019)
T ss_pred hhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCC
Confidence 9999999999999999999999999987644321 23478999999999999999999888
Q ss_pred CeEEEEeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHHH
Q 001568 698 GKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGR 777 (1051)
Q Consensus 698 ~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~gR 777 (1051)
..||||.||+||..||+..|++|.+|+++|||.||+||||+||||||||++|+|++|++||++++||||.+|+..+++||
T Consensus 683 eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGR 762 (1019)
T KOG0203|consen 683 EIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGR 762 (1019)
T ss_pred ceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhhhhccCCCCCcccccCCCCC-CCCCCcc
Q 001568 778 SIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRK-IDDALIN 856 (1051)
Q Consensus 778 ~~~~~i~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~l~l~~~~~~~~~~~~~p~~-~~~~~~~ 856 (1051)
.+|+|++|.+.|.+++|+.++.+.+++.++|+|.|+.++++|.+++..|..|+++|++|+|+.|+|+|+||. +.+.++|
T Consensus 763 LiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN 842 (1019)
T KOG0203|consen 763 LIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRNPKDDKLVN 842 (1019)
T ss_pred ehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCCCccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 7778888
Q ss_pred hHHH-HHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCcccccccccccCccCCCCCccccccccCCCcccccCCC
Q 001568 857 SWVL-LRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNP 935 (1051)
Q Consensus 857 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 935 (1051)
.+.+ +.|+.+|++++++.++.|+..+....++..++.+- -..|..-..+++.+++||.|+.+..
T Consensus 843 ~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~i---------------r~~W~d~~~~Dl~DsyGQeWtyeqR 907 (1019)
T KOG0203|consen 843 KRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGL---------------REDWDDDGVNDLTDSYGQEWTYEQR 907 (1019)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhh---------------HHhhhhhhhhhhhhhccccccHHHH
Confidence 7764 77889999999998888777666655554433221 1247666778999999999998643
Q ss_pred CccccccccchhHHHHHHHHHHHHHHhhhccccCCCccccCCCCChHHHHHHHHHHHHHHHHHhccccccccccccCChh
Q 001568 936 CDYFTIGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLN 1015 (1051)
Q Consensus 936 ~~~~~~~~~~a~t~~f~~lv~~q~~~~~~~~~~~~s~~~~~~~~N~~~~~~i~~~~~l~~~i~~vp~~~~~f~~~~l~~~ 1015 (1051)
... ....+|..|.++|++|+++.+.|++|+.|+|.++ ++||.+.++++..+++.++++|+|++...++..|+.+.
T Consensus 908 k~l----e~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqG-mrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~ 982 (1019)
T KOG0203|consen 908 KYL----EYTCYTAFFISIVVVQWADLIICKTRRNSIFQQG-MRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQ 982 (1019)
T ss_pred HHH----HHhhhhheeeeehHHhHhhHHhhhcchhHHHHhh-hhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcE
Confidence 321 2346889999999999999999999999999988 89999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcc
Q 001568 1016 EWFLVILVSAPVILIDEVLKFVGRNR 1041 (1051)
Q Consensus 1016 ~w~~~l~~~~~~l~i~e~~K~~~R~~ 1041 (1051)
.|+..++++++++++||++|+++|+.
T Consensus 983 ~wl~a~P~~ilIfvydE~Rk~~IR~~ 1008 (1019)
T KOG0203|consen 983 WWLVAFPFGILIFVYDEVRKLFIRRY 1008 (1019)
T ss_pred EEEecccceeeeeeHHHHHhHhhhhC
Confidence 99999999999999999999998864
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-129 Score=1200.99 Aligned_cols=837 Identities=27% Similarity=0.410 Sum_probs=708.7
Q ss_pred ccccCCHHHHHHHcCCCCCCCCCHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhcCCC
Q 001568 7 PAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSD 86 (1051)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~ils~~~~~~~~~~ 86 (1051)
..+..+.+++++.|+++. +|||++|+++|+++||+|+++.++++++|+.+++||+++++++++++++++++.+
T Consensus 48 ~~~~~~~~~v~~~l~~~~-~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~------ 120 (902)
T PRK10517 48 KAAVMPEEELWKTFDTHP-EGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE------ 120 (902)
T ss_pred HHHcCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc------
Confidence 346789999999999997 6999999999999999999999999999999999999999999999999998764
Q ss_pred CCCCCccccchhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCceeEEEEC------CeeceEeeCCCccCCcEEEeC
Q 001568 87 SGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRD------GYLVPDLPAIGLVPGDIVELG 160 (1051)
Q Consensus 87 ~~~~~~~~~~~~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r~------g~~~~~I~~~~Lv~GDII~l~ 160 (1051)
.|.++++++++++++.+++++||+|+++.+++|+++.+.+++|+|| |++ ++|+++||||||+|.|+
T Consensus 121 -------~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~-~~I~~~eLvpGDiV~l~ 192 (902)
T PRK10517 121 -------DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGW-LEIPIDQLVPGDIIKLA 192 (902)
T ss_pred -------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeE-EEEEHHhCCCCCEEEEC
Confidence 5678888999999999999999999999999999999999999999 678 89999999999999999
Q ss_pred CCCcccccEEEEEecCCceEEeccCCCCCCcccccCCCCCCCCcccccccccEEEeccEEEeceEEEEEEEeccchhhhH
Q 001568 161 VGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240 (1051)
Q Consensus 161 ~G~~vPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~ 240 (1051)
+||+|||||+|++ +.++.||||+|||||.|+.|.+++....+.+..+++|++|+||.|.+|+++++|++||.+|.+|+
T Consensus 193 ~Gd~IPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~Gk 270 (902)
T PRK10517 193 AGDMIPADLRILQ--ARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQ 270 (902)
T ss_pred CCCEEeeeEEEEE--cCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHH
Confidence 9999999999996 45689999999999999999987654445566778899999999999999999999999999999
Q ss_pred HHHHHhhccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhHHHHHHHHHHHHHH
Q 001568 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVA 320 (1051)
Q Consensus 241 i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~ 320 (1051)
+.+.+.++ +.+++|+++.++++++++..++++++.+++++..... .+| ...+..+++++++
T Consensus 271 I~~~v~~~--~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~------~~~-----------~~~l~~alsv~V~ 331 (902)
T PRK10517 271 LAGRVSEQ--DSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTK------GDW-----------WEAALFALSVAVG 331 (902)
T ss_pred HHHHhhcc--CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhc------CCH-----------HHHHHHHHHHHHH
Confidence 99999877 7789999999999999988877777776665543211 122 3456778999999
Q ss_pred hcCCchHHHHHHHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCcccceeeEeecCcc
Q 001568 321 AIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTT 400 (1051)
Q Consensus 321 ~iP~~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~ 400 (1051)
+|||+||++++++++.++++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.++.... +
T Consensus 332 ~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~------------~-- 397 (902)
T PRK10517 332 LTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS------------G-- 397 (902)
T ss_pred HcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCC------------C--
Confidence 99999999999999999999999999999999999999999999999999999999998764211 0
Q ss_pred cCCCCCCccCCCCCCChHHHHHHHHHHhhhccCccccCCCcccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhhh
Q 001568 401 YDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480 (1051)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~ 480 (1051)
... .+++..+++|.... ...+||+|.|++.+++..+..
T Consensus 398 --------------~~~---~~ll~~a~l~~~~~--------~~~~~p~d~All~~a~~~~~~----------------- 435 (902)
T PRK10517 398 --------------KTS---ERVLHSAWLNSHYQ--------TGLKNLLDTAVLEGVDEESAR----------------- 435 (902)
T ss_pred --------------CCH---HHHHHHHHhcCCcC--------CCCCCHHHHHHHHHHHhcchh-----------------
Confidence 001 22344444443211 125899999999988643200
Q ss_pred cccccccccccccccccccceeEeecCCCCCceEEEEEecCCCcEEEEEcCChhHHHhhccccccCCCceecCCHHHHHH
Q 001568 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQL 560 (1051)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~~~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~ 560 (1051)
...+.|..+.++||+|+||+|+++++..++...+++||+||.++++|++... +|...+++++.++.
T Consensus 436 -------------~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~ 501 (902)
T PRK10517 436 -------------SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRH-NGEIVPLDDIMLRR 501 (902)
T ss_pred -------------hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhc-CCCeecCCHHHHHH
Confidence 0123567788999999999999999877777889999999999999997754 66778999999999
Q ss_pred HHHHHHHHhhccceEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChhHHHHHHHHHhC
Q 001568 561 MLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGA 640 (1051)
Q Consensus 561 ~~~~~~~~a~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~~ 640 (1051)
+.+..++++++|+||+++|||.++.+... . ....|+|++|+|+++|+||+|++++++|++|+++
T Consensus 502 i~~~~~~~a~~G~rvlavA~k~~~~~~~~---------------~-~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~a 565 (902)
T PRK10517 502 IKRVTDTLNRQGLRVVAVATKYLPAREGD---------------Y-QRADESDLILEGYIAFLDPPKETTAPALKALKAS 565 (902)
T ss_pred HHHHHHHHHhcCCEEEEEEEecCCccccc---------------c-ccccccCceeeehHhhhCcchhhHHHHHHHHHHC
Confidence 99999999999999999999977532100 0 0112679999999999999999999999999999
Q ss_pred CcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCchhHHHHHHHHhhcC
Q 001568 641 GIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720 (1051)
Q Consensus 641 gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g 720 (1051)
||+++|+||||+.||.++|+++||.. ..+++|.+++.++++++.+.+. +..||||++|+||.++|+.+|++|
T Consensus 566 GI~v~miTGD~~~tA~~IA~~lGI~~------~~v~~G~el~~l~~~el~~~~~--~~~VfAr~sPe~K~~IV~~Lq~~G 637 (902)
T PRK10517 566 GVTVKILTGDSELVAAKVCHEVGLDA------GEVLIGSDIETLSDDELANLAE--RTTLFARLTPMHKERIVTLLKREG 637 (902)
T ss_pred CCEEEEEcCCCHHHHHHHHHHcCCCc------cCceeHHHHHhCCHHHHHHHHh--hCcEEEEcCHHHHHHHHHHHHHCC
Confidence 99999999999999999999999953 3689999999999999999998 678999999999999999999999
Q ss_pred CEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 001568 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVIS 800 (1051)
Q Consensus 721 ~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~n~~~~~~ 800 (1051)
++|+|+|||.||+|||++|||||||| +|+|+|+++||+++++|+|..+++++++||++|.|++|++.|.++.|+..++.
T Consensus 638 ~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~ 716 (902)
T PRK10517 638 HVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFS 716 (902)
T ss_pred CEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 99999999999999999999999999 99999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHhcCCCchhHHHHHHHHHHHhhhhhhhccCCCCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 001568 801 IFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVL 880 (1051)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (1051)
.+++.++..+.|++|+|++|+|+++| +|+++++++|+++++|++||+.... . ....+++.|++.+++.+..|.+
T Consensus 717 ~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r~~~~-~----~~~~~~~~g~~~~~~~~~~~~~ 790 (902)
T PRK10517 717 VLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQRWNPA-D----LGRFMVFFGPISSIFDILTFCL 790 (902)
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCCCCHH-H----HHHHHHHHHHHHHHHHHHHHHH
Confidence 88877774337999999999999999 6899999999999999999973211 1 2223455666655544433332
Q ss_pred HHhhcccccccccCCCCcccccccccccCccCCCCCccccccccCCCcccccCCCCccccccccchhHHHHHHHHHHHHH
Q 001568 881 WYTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMF 960 (1051)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~t~~f~~lv~~q~~ 960 (1051)
++... + |. . . ......++..|.+++++|++
T Consensus 791 ~~~~~---~------------------------~~-------------------~-~---~~~~~~~~~~F~~~~~~q~~ 820 (902)
T PRK10517 791 MWWVF---H------------------------AN-------------------T-P---ETQTLFQSGWFVVGLLSQTL 820 (902)
T ss_pred HHHHc---c------------------------cc-------------------c-h---hhHhHHHHHHHHHHHHHHHH
Confidence 21110 0 00 0 0 00011345569999999999
Q ss_pred HhhhccccCCCccccCCCCChHHHHHHHHHHHHHHHHHhcc--ccccccccccCC--hhhHHHHHHHHHHHHHHHHHHHH
Q 001568 961 NSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVP--FLADVFGVVPLN--LNEWFLVILVSAPVILIDEVLKF 1036 (1051)
Q Consensus 961 ~~~~~~~~~~s~~~~~~~~N~~~~~~i~~~~~l~~~i~~vp--~~~~~f~~~~l~--~~~w~~~l~~~~~~l~i~e~~K~ 1036 (1051)
+.+++|+++. ++|+|++.+.+++.+++++++.+|+| +++.+|++.|++ +..|+++++++++ ++.|++|.
T Consensus 821 ~~~~~R~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~ 893 (902)
T PRK10517 821 IVHMIRTRRI-----PFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKG 893 (902)
T ss_pred HHHhhccCCC-----CcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHH
Confidence 9999998654 56789999999999999999999999 889999999999 7888888887766 56788774
Q ss_pred H
Q 001568 1037 V 1037 (1051)
Q Consensus 1037 ~ 1037 (1051)
.
T Consensus 894 ~ 894 (902)
T PRK10517 894 F 894 (902)
T ss_pred H
Confidence 3
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-128 Score=1192.05 Aligned_cols=839 Identities=28% Similarity=0.421 Sum_probs=706.9
Q ss_pred cccccCCHHHHHHHcCCCCCCCCCHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhcCC
Q 001568 6 FPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSS 85 (1051)
Q Consensus 6 ~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~ils~~~~~~~~~ 85 (1051)
.+.|.++.+++++.|+++. +|||++|+++|+++||+|+++.++++++|+.++++|+++++++++++++++++.+
T Consensus 13 ~~~~~~~~~~~~~~l~~~~-~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~----- 86 (867)
T TIGR01524 13 LKESQMGKETLLRKLGVHE-TGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD----- 86 (867)
T ss_pred HHHHhCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh-----
Confidence 4568899999999999986 7999999999999999999999888899999999999999999999999998764
Q ss_pred CCCCCCccccchhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCceeEEEE------CCeeceEeeCCCccCCcEEEe
Q 001568 86 DSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLR------DGYLVPDLPAIGLVPGDIVEL 159 (1051)
Q Consensus 86 ~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r------~g~~~~~I~~~~Lv~GDII~l 159 (1051)
.|.++++++++++++.++++++|+|+++++++|+++.+.+++|+| ||++ ++|+++||||||+|.|
T Consensus 87 --------~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~-~~I~~~eLv~GDiV~l 157 (867)
T TIGR01524 87 --------DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSM-DEVPIDALVPGDLIEL 157 (867)
T ss_pred --------hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeE-EEEEhhcCCCCCEEEE
Confidence 567788899999999999999999999999999999999999999 9999 9999999999999999
Q ss_pred CCCCcccccEEEEEecCCceEEeccCCCCCCcccccCCCCCCCCcccccccccEEEeccEEEeceEEEEEEEeccchhhh
Q 001568 160 GVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIG 239 (1051)
Q Consensus 160 ~~G~~vPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g 239 (1051)
++||+|||||+|++ +.++.||||+|||||.|+.|.+++....+.+..+++|++|+||.+.+|.++++|++||.+|.+|
T Consensus 158 ~~Gd~VPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~g 235 (867)
T TIGR01524 158 AAGDIIPADARVIS--ARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFG 235 (867)
T ss_pred CCCCEEcccEEEEe--cCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHH
Confidence 99999999999996 4568999999999999999998754444556677889999999999999999999999999999
Q ss_pred HHHHHHhhccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhHHHHHHHHHHHHH
Q 001568 240 KIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAV 319 (1051)
Q Consensus 240 ~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~ 319 (1051)
++.+.+.+ ..+++|+++.++++++++..+++++++++++++.... .+| ...+..++++++
T Consensus 236 ki~~~v~~---~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~------~~~-----------~~~~~~al~l~v 295 (867)
T TIGR01524 236 SLAIAATE---RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMK------GDW-----------LEAFLFALAVAV 295 (867)
T ss_pred HHHHHhhC---CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhc------CCH-----------HHHHHHHHHHHH
Confidence 99998865 3457899999999999998877777766655432211 122 345777899999
Q ss_pred HhcCCchHHHHHHHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCcccceeeEeecCc
Q 001568 320 AAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGT 399 (1051)
Q Consensus 320 ~~iP~~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~ 399 (1051)
++|||+||++++++++.++++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++....
T Consensus 296 ~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~------------- 362 (867)
T TIGR01524 296 GLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG------------- 362 (867)
T ss_pred HhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC-------------
Confidence 9999999999999999999999999999999999999999999999999999999999998753210
Q ss_pred ccCCCCCCccCCCCCCChHHHHHHHHHHhhhccCccccCCCcccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhh
Q 001568 400 TYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAAN 479 (1051)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~ 479 (1051)
... .+++.++++|+.. + ...+||.|.|+++++.+.+..
T Consensus 363 ---------------~~~---~~~l~~a~l~~~~--~------~~~~~p~~~Al~~~~~~~~~~---------------- 400 (867)
T TIGR01524 363 ---------------ETS---ERVLKMAWLNSYF--Q------TGWKNVLDHAVLAKLDESAAR---------------- 400 (867)
T ss_pred ---------------CCH---HHHHHHHHHhCCC--C------CCCCChHHHHHHHHHHhhchh----------------
Confidence 001 2233444444321 1 124699999999988643210
Q ss_pred hcccccccccccccccccccceeEeecCCCCCceEEEEEecCCCcEEEEEcCChhHHHhhccccccCCCceecCCHHHHH
Q 001568 480 YLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQ 559 (1051)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~~~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~ 559 (1051)
.....++.+.++||+|+||+|+++++..++..++++||+||.++++|+++.. +|...+++++.++
T Consensus 401 --------------~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~ 465 (867)
T TIGR01524 401 --------------QTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRF-GGAVVTLSESEKS 465 (867)
T ss_pred --------------hHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhc-CCceecCCHHHHH
Confidence 0123567788999999999999999876666889999999999999997754 6777889998899
Q ss_pred HHHHHHHHHhhccceEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChhHHHHHHHHHh
Q 001568 560 LMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRG 639 (1051)
Q Consensus 560 ~~~~~~~~~a~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~ 639 (1051)
.+.+.+++++++|+|++++|||.++.+..+ .....|++++|+|+++++||+|++++++|++|++
T Consensus 466 ~i~~~~~~~a~~G~rvlavA~~~~~~~~~~----------------~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~ 529 (867)
T TIGR01524 466 ELQDMTAEMNRQGIRVIAVATKTLKVGEAD----------------FTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFK 529 (867)
T ss_pred HHHHHHHHHHhcCCEEEEEEEeccCccccc----------------ccccccCCcEEEEEEEeeCCCchhHHHHHHHHHH
Confidence 999999999999999999999987532100 0011267999999999999999999999999999
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCchhHHHHHHHHhhc
Q 001568 640 AGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEM 719 (1051)
Q Consensus 640 ~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~ 719 (1051)
+||+++|+|||++.||.++|+++||.. ..+++|.+++.++++++.+.+. +..+|||++|+||.++|+.+|++
T Consensus 530 aGI~vvmiTGD~~~tA~aIA~~lGI~~------~~v~~g~~l~~~~~~el~~~~~--~~~vfAr~~Pe~K~~iV~~lq~~ 601 (867)
T TIGR01524 530 NGINVKVLTGDNEIVTARICQEVGIDA------NDFLLGADIEELSDEELARELR--KYHIFARLTPMQKSRIIGLLKKA 601 (867)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHcCCCC------CCeeecHhhhhCCHHHHHHHhh--hCeEEEECCHHHHHHHHHHHHhC
Confidence 999999999999999999999999963 3588999999999999999888 77899999999999999999999
Q ss_pred CCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 001568 720 GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVI 799 (1051)
Q Consensus 720 g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~n~~~~~ 799 (1051)
|++|+|+|||.||+|||++|||||||| +|+|+|+++||+++++|+|..+++++++||++++|+++++.|.++.|+..++
T Consensus 602 G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~ 680 (867)
T TIGR01524 602 GHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVF 680 (867)
T ss_pred CCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHhhhhhhhccCCCCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 001568 800 SIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFV 879 (1051)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (1051)
..+++.++..+.|++|+|++|+|+++| +|+++++++|+++++|++||+ ++.+.+ ...++..|++.+++.+..|.
T Consensus 681 ~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~-~~~~~~----~~~~~~~g~~~~~~~~~~~~ 754 (867)
T TIGR01524 681 SVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQ-WEQKGM----GRFMLCIGPVSSIFDIATFL 754 (867)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCC-CChhhH----HHHHHHHHHHHHHHHHHHHH
Confidence 888887776558999999999999999 799999999999999987666 444322 23344566655544443333
Q ss_pred HHHhhcccccccccCCCCcccccccccccCccCCCCCccccccccCCCcccccCCCCccccccccchhHHHHHHHHHHHH
Q 001568 880 LWYTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEM 959 (1051)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~t~~f~~lv~~q~ 959 (1051)
+++... +. . .+ ......+|..|.+++++|+
T Consensus 755 ~~~~~~---~~----~-----------------~~--------------------------~~~~~~~t~~f~~~~~~~~ 784 (867)
T TIGR01524 755 LMWFVF---SA----N-----------------TV--------------------------EEQALFQSGWFVVGLLSQT 784 (867)
T ss_pred HHHHHh---cc----c-----------------ch--------------------------hhhhHHHHHHHHHHHHHHH
Confidence 221111 00 0 00 0011236788999999999
Q ss_pred HHhhhccccCCCccccCCCCChHHHHHHHHHHHHHHHHHhcccc--ccccccccC--ChhhHHHHHHHHHHHHHHHHHHH
Q 001568 960 FNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFL--ADVFGVVPL--NLNEWFLVILVSAPVILIDEVLK 1035 (1051)
Q Consensus 960 ~~~~~~~~~~~s~~~~~~~~N~~~~~~i~~~~~l~~~i~~vp~~--~~~f~~~~l--~~~~w~~~l~~~~~~l~i~e~~K 1035 (1051)
++.+++|+++. ++|+|++.+.+++++++++++++|+|++ +.+|++.|+ ++..|+++++++++ ++.|++|
T Consensus 785 ~~~~~~R~~~~-----~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k 857 (867)
T TIGR01524 785 LVVHMIRTEKI-----PFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVK 857 (867)
T ss_pred HHHHhhCcCCC-----CcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHH
Confidence 99999998654 5567999999999999999999999984 889999988 55678877777665 6678888
Q ss_pred HHhh
Q 001568 1036 FVGR 1039 (1051)
Q Consensus 1036 ~~~R 1039 (1051)
.+..
T Consensus 858 ~~~~ 861 (867)
T TIGR01524 858 TFYI 861 (867)
T ss_pred HHHH
Confidence 5433
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-117 Score=1117.94 Aligned_cols=845 Identities=21% Similarity=0.279 Sum_probs=658.5
Q ss_pred CCCCCHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccchhhhHHHH
Q 001568 25 DKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLI 104 (1051)
Q Consensus 25 ~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~ils~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 104 (1051)
.+|||++|+++|+++||+|+++.++ +++|+++++++.+|++++++++.++++.. . +|+++++++++
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~-~s~~~ll~~~~~~p~~i~~i~~~~l~~~~----~---------~~~~~~~i~~i 202 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPV-PSFLELLKEEVLHPFYVFQVFSVILWLLD----E---------YYYYSLCIVFM 202 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhh----h---------hHHHHHHHHHH
Confidence 4799999999999999999999865 68999999999999998887775555432 1 56778889999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhhcCceeEEEECCeeceEeeCCCccCCcEEEeC--CCCcccccEEEEEecCCceEEe
Q 001568 105 LVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELG--VGDKVPADMRVAALKTSSLRVE 182 (1051)
Q Consensus 105 ~~i~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~~I~~~~Lv~GDII~l~--~G~~vPaD~~ll~~~~g~~~Vd 182 (1051)
++++..++.++++++.+.++++.. .+..++|+|||++ ++|+++||||||||.|+ +|++|||||+|++ |+|.||
T Consensus 203 ~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~-~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~---g~~~Vd 277 (1054)
T TIGR01657 203 SSTSISLSVYQIRKQMQRLRDMVH-KPQSVIVIRNGKW-VTIASDELVPGDIVSIPRPEEKTMPCDSVLLS---GSCIVN 277 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-CCeeEEEEECCEE-EEEEcccCCCCCEEEEecCCCCEecceEEEEe---CcEEEe
Confidence 999999999999999888888765 4678999999999 99999999999999999 9999999999994 789999
Q ss_pred ccCCCCCCcccccCCCCCC--C---CcccccccccEEEeccEEEe-------ceEEEEEEEeccchhhhHHHHHHhhccc
Q 001568 183 QSSLTGEAMPILKGTSPVF--L---DDCELQAKENMVFAGTTVVN-------GSCVCIVINTGMNTEIGKIQKQIHDASL 250 (1051)
Q Consensus 183 es~LTGEs~pv~K~~~~~~--~---~~~~~~~~~~~l~aGt~v~~-------g~~~~~V~~tG~~T~~g~i~~~~~~~~~ 250 (1051)
||+|||||.|+.|.+.+.. . ......+++|++|+||.|++ |.+.|+|++||.+|..|++.+++..+
T Consensus 278 ES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~-- 355 (1054)
T TIGR01657 278 ESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYP-- 355 (1054)
T ss_pred cccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCC--
Confidence 9999999999999875431 1 11223467899999999995 78999999999999999999998877
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhHHHHHHHHHHHHHHhcCCchHHHH
Q 001568 251 EESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVI 330 (1051)
Q Consensus 251 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~ 330 (1051)
+...+++++...++...+..++++.++++++..... . .+ ....+..++.+++++||++||+++
T Consensus 356 ~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~~~~--~----~~-----------~~~~~l~~l~iiv~~vP~~LP~~~ 418 (1054)
T TIGR01657 356 KPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKD--G----RP-----------LGKIILRSLDIITIVVPPALPAEL 418 (1054)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--C----Cc-----------HHHHHHHHHHHHHhhcCchHHHHH
Confidence 667788888888777666544443333333221110 0 11 245677889999999999999999
Q ss_pred HHHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCcccceeeEeecCcccCCCCCCccC
Q 001568 331 TTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVD 410 (1051)
Q Consensus 331 ~~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (1051)
+++++++++||+|+|++||++.++|+||++|++|||||||||+|+|+|.+++..+..... ... ..+
T Consensus 419 ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~------~~~-~~~------- 484 (1054)
T TIGR01657 419 SIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEF------LKI-VTE------- 484 (1054)
T ss_pred HHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCcccc------ccc-ccc-------
Confidence 999999999999999999999999999999999999999999999999999875431100 000 000
Q ss_pred CCCCCChHHHHHHHHHHhhhccCccccCCCcccccCCchHHHHHHHHHHcCCCCCC-CCcccchhhhhhhhccccccccc
Q 001568 411 WPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVK-GRNKISDTQLAANYLIDSSTVRL 489 (1051)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 489 (1051)
........+..+++.||+.... ++ ...|||+|.|+++++ |+.... ......... .+ ...
T Consensus 485 ----~~~~~~~~~~~~~a~C~~~~~~-~~---~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~-------~~-~i~- 544 (1054)
T TIGR01657 485 ----DSSLKPSITHKALATCHSLTKL-EG---KLVGDPLDKKMFEAT---GWTLEEDDESAEPTSI-------LA-VVR- 544 (1054)
T ss_pred ----ccccCchHHHHHHHhCCeeEEE-CC---EEecCHHHHHHHHhC---CCEEECCCCccccccc-------cc-cee-
Confidence 0001223456678899987543 22 467999999999875 332111 000000000 00 000
Q ss_pred ccccccccccceeEeecCCCCCceEEEEEecCC-CcEEEEEcCChhHHHhhccccccCCCceecCCHHHHHHHHHHHHHH
Q 001568 490 GCCEWWTKRSKRVATLEFDRIRKSMSVIVREPT-GHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEM 568 (1051)
Q Consensus 490 ~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~~-~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 568 (1051)
.......+++++++||+|++|||||+++..+ ++.++|+|||||.|+++|++.. .++.+.+.+++|
T Consensus 545 --~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~------------~p~~~~~~~~~~ 610 (1054)
T TIGR01657 545 --TDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPET------------VPSDYQEVLKSY 610 (1054)
T ss_pred --ccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcC------------CChhHHHHHHHH
Confidence 0001246889999999999999999998654 5678999999999999998421 135577889999
Q ss_pred hhccceEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChhHHHHHHHHHhCCcEEEEEc
Q 001568 569 SSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVIT 648 (1051)
Q Consensus 569 a~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~T 648 (1051)
+++|+||||+|||.+++.. + ....+..++++|+||+|+|+++|+||+|++++++|+.|+++||+++|+|
T Consensus 611 a~~G~RVLalA~k~l~~~~--~---------~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miT 679 (1054)
T TIGR01657 611 TREGYRVLALAYKELPKLT--L---------QKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMIT 679 (1054)
T ss_pred HhcCCEEEEEEEeecCccc--h---------hhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEEC
Confidence 9999999999999886210 0 0001123456799999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCc-------------------------------------------------cccccCch
Q 001568 649 GDNKSTAEAICRQIKLFSGNEDL-------------------------------------------------TGRSFTGK 679 (1051)
Q Consensus 649 Gd~~~ta~~ia~~~gi~~~~~~~-------------------------------------------------~~~~~~g~ 679 (1051)
|||+.||.++|+++||.++...+ ...+++|+
T Consensus 680 GD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~ 759 (1054)
T TIGR01657 680 GDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGK 759 (1054)
T ss_pred CCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcH
Confidence 99999999999999997643210 02467888
Q ss_pred HHhcC---CHHHHHHHHHhcCCeEEEEeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhc
Q 001568 680 EFMAL---SSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEA 756 (1051)
Q Consensus 680 ~~~~l---~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ 756 (1051)
+++.+ .++++.+++. +..||||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||| . .| |..+
T Consensus 760 ~l~~l~~~~~~~l~~~~~--~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~-~-~d-as~A 834 (1054)
T TIGR01657 760 AFAVLQAHSPELLLRLLS--HTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLS-E-AE-ASVA 834 (1054)
T ss_pred HHHHHHHhhHHHHHHHHh--cCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeec-c-cc-ceee
Confidence 87653 4456777777 67899999999999999999999999999999999999999999999998 3 35 4489
Q ss_pred cCeeecCCCchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhhhhccCC
Q 001568 757 SDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFN 836 (1051)
Q Consensus 757 ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~l~l~~~ 836 (1051)
||+++.+++|++++++|++||+++.+++++++|++.+++...+..++..+. +.+++++|++|+|++++++++++|+.+
T Consensus 835 A~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~l~~~Q~l~i~li~~~~~~l~l~~~ 912 (1054)
T TIGR01657 835 APFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYLI--GSNLGDGQFLTIDLLLIFPVALLMSRN 912 (1054)
T ss_pred cccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--cCcCccHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999887766655444 478999999999999999999999999
Q ss_pred CCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCcccccccccccCccCCCCC
Q 001568 837 PADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSN 916 (1051)
Q Consensus 837 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (1051)
+|.+++|+++|. ++++++..+.+++.+++++.+..+..+.+..... |..
T Consensus 913 ~p~~~l~~~~P~---~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~----------------------------~~~ 961 (1054)
T TIGR01657 913 KPLKKLSKERPP---SNLFSVYILTSVLIQFVLHILSQVYLVFELHAQP----------------------------WYK 961 (1054)
T ss_pred CchhhcCCCCCC---ccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCC----------------------------Ccc
Confidence 999999999985 5899999999998888887776655554322111 110
Q ss_pred ccccccccCCCcccccCCCCccccccccchhHHHHHHHHHHHHHHhhhccccCCCccccCCCCChHHHHHHHHHHHHHHH
Q 001568 917 FTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCL 996 (1051)
Q Consensus 917 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~t~~f~~lv~~q~~~~~~~~~~~~s~~~~~~~~N~~~~~~i~~~~~l~~~ 996 (1051)
... +. + ....+ ......|++| .++.+|.+..+.+++. .++|+.++++|+++++++++++++++.
T Consensus 962 ~~~-~~----------~-~~~~~--~~~~~~T~~f-~~~~~~~~~~~~~~~~-g~pf~~~~~~N~~~~~~~~~~~~~~~~ 1025 (1054)
T TIGR01657 962 PEN-PV----------D-LEKEN--FPNLLNTVLF-FVSSFQYLITAIVNSK-GPPFREPIYKNKPFVYLLITGLGLLLV 1025 (1054)
T ss_pred CCC-CC----------C-ccccc--CccHHHHHHH-HHHHHHHHHheEEEcC-CcchhhhHHHhHHHHHHHHHHHHHHHH
Confidence 000 00 0 00000 1223467777 4556666666777775 778999999999999998888777663
Q ss_pred -H-HhccccccccccccCChhhHHHHH
Q 001568 997 -I-LYVPFLADVFGVVPLNLNEWFLVI 1021 (1051)
Q Consensus 997 -i-~~vp~~~~~f~~~~l~~~~w~~~l 1021 (1051)
+ .++|+++.+|++.|++. .|...+
T Consensus 1026 ~~~~~~~~l~~~~~~~~~~~-~~~~~l 1051 (1054)
T TIGR01657 1026 LLLDPHPLLGKILQIVPLPQ-EFRSKL 1051 (1054)
T ss_pred hhhCCCHHHHhhheeeeCCH-HHHHHH
Confidence 2 36899999999999985 665443
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-114 Score=1054.86 Aligned_cols=751 Identities=29% Similarity=0.442 Sum_probs=623.4
Q ss_pred CCCHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccchhhhHHHHHH
Q 001568 27 GLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILV 106 (1051)
Q Consensus 27 GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~ils~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 106 (1051)
|||++|+++|+++||+|+++.++ ++.|+.++++|+++++++++++++++++++ .|.++++++++++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------------~~~~~~~i~~~~~ 66 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKK-VSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------------NWVDFVIILGLLL 66 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------------chhhhhhhhhhhH
Confidence 89999999999999999999844 467899999999999999999999998874 4677888889999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhhcCceeEEEECCeeceEeeCCCccCCcEEEeCCCCcccccEEEEEecCCceEEeccCC
Q 001568 107 LNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSL 186 (1051)
Q Consensus 107 i~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~~~~g~~~Vdes~L 186 (1051)
++..++++||+++++.+++|+++.+.+++|+|||++ ++|+++||||||+|.|++||+|||||+|++ +.++.||||+|
T Consensus 67 i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~-~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~--g~~~~VDeS~L 143 (755)
T TIGR01647 67 LNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKW-QEIPASELVPGDVVRLKIGDIVPADCRLFE--GDYIQVDQAAL 143 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCEE-EEEEhhhCcCCCEEEECCCCEEeceEEEEe--cCceEEEcccc
Confidence 999999999999999999999999999999999999 999999999999999999999999999996 33599999999
Q ss_pred CCCCcccccCCCCCCCCcccccccccEEEeccEEEeceEEEEEEEeccchhhhHHHHHHhhccccCCCChhHHHHHHHHH
Q 001568 187 TGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGN 266 (1051)
Q Consensus 187 TGEs~pv~K~~~~~~~~~~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~~~~~~~ 266 (1051)
||||.|+.|.++ |.+|+||.+.+|+++++|++||.+|.+|++.+++.++ +..++|+|+.+++++.
T Consensus 144 TGES~PV~K~~~-------------~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~--~~~~~~lq~~~~~i~~ 208 (755)
T TIGR01647 144 TGESLPVTKKTG-------------DIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQST--ETGSGHLQKILSKIGL 208 (755)
T ss_pred cCCccceEeccC-------------CeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhcc--CCCCCcHHHHHHHHHH
Confidence 999999999864 7899999999999999999999999999999999877 6678999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHHhhhcCc
Q 001568 267 RLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNA 346 (1051)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i 346 (1051)
++++++++++++++++++.... .+| ...+.+++++++++|||+||++++++++.++++|+|+|+
T Consensus 209 ~~~~~~~~~~~i~~~~~~~~~~-----~~~-----------~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gi 272 (755)
T TIGR01647 209 FLIVLIGVLVLIELVVLFFGRG-----ESF-----------REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKA 272 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-----CCH-----------HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCe
Confidence 9988888777777766543110 122 445777899999999999999999999999999999999
Q ss_pred ccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCcccceeeEeecCcccCCCCCCccCCCCCCChHHHHHHHHH
Q 001568 347 IVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKI 426 (1051)
Q Consensus 347 ~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (1051)
++|+++++|+||++|+||||||||||+|+|+|.+++..+.. + .. ..++..
T Consensus 273 lvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-------------~--------------~~---~~~l~~ 322 (755)
T TIGR01647 273 IVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNG-------------F--------------DK---DDVLLY 322 (755)
T ss_pred EEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCC-------------C--------------CH---HHHHHH
Confidence 99999999999999999999999999999999998864310 0 01 123444
Q ss_pred HhhhccCccccCCCcccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhhhcccccccccccccccccccceeEeec
Q 001568 427 CAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLE 506 (1051)
Q Consensus 427 ~~~c~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 506 (1051)
+++|++. ..+||.|.|+++++++.+. ....++++..+|
T Consensus 323 a~~~~~~----------~~~~pi~~Ai~~~~~~~~~--------------------------------~~~~~~~~~~~p 360 (755)
T TIGR01647 323 AALASRE----------EDQDAIDTAVLGSAKDLKE--------------------------------ARDGYKVLEFVP 360 (755)
T ss_pred HHHhCCC----------CCCChHHHHHHHHHHHhHH--------------------------------HHhcCceEEEec
Confidence 5555521 2479999999998865320 013456788999
Q ss_pred CCCCCceEEEEEecCC-CcEEEEEcCChhHHHhhccccccCCCceecCCHHHHHHHHHHHHHHhhccceEEEEEEecccc
Q 001568 507 FDRIRKSMSVIVREPT-GHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELG 585 (1051)
Q Consensus 507 F~s~rk~msviv~~~~-~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~a~k~l~~ 585 (1051)
|++.+|+|+++++..+ |+.++++||+||.++++|++. ++.++++.+.+++++++|+|++++|+|+.
T Consensus 361 f~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~~~~~~~~~~G~rvl~vA~~~~-- 427 (755)
T TIGR01647 361 FDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVEEKVDELASRGYRALGVARTDE-- 427 (755)
T ss_pred cCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHHHHHHHHHHhCCCEEEEEEEEcC--
Confidence 9999999999998654 778889999999999999732 23456788888999999999999999721
Q ss_pred ccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCC
Q 001568 586 EFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (1051)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~ 665 (1051)
|++++|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||.
T Consensus 428 -------------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~ 482 (755)
T TIGR01647 428 -------------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLG 482 (755)
T ss_pred -------------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 4689999999999999999999999999999999999999999999999999996
Q ss_pred CCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe
Q 001568 666 SGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAM 745 (1051)
Q Consensus 666 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~ 745 (1051)
.... -.....+|.+.+.++++++.+.+. +..+|||++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||
T Consensus 483 ~~~~-~~~~l~~~~~~~~~~~~~~~~~~~--~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm 559 (755)
T TIGR01647 483 TNIY-TADVLLKGDNRDDLPSGELGEMVE--DADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAV 559 (755)
T ss_pred CCCc-CHHHhcCCcchhhCCHHHHHHHHH--hCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEe
Confidence 4210 011234455556788888888888 6779999999999999999999999999999999999999999999999
Q ss_pred CCCccHHHHhccCeeecCCCchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHH
Q 001568 746 GITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVT 825 (1051)
Q Consensus 746 g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~ 825 (1051)
| +|+|+|+++||+++++|+|..++.++++||+++.|+++++.|.++.|+..++..++..++ ++.|++|+|++|+|+++
T Consensus 560 ~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~-~~~~l~~~~il~~~l~~ 637 (755)
T TIGR01647 560 A-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILI-LNFYFPPIMVVIIAILN 637 (755)
T ss_pred c-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH-hCcchhHHHHHHHHHHH
Confidence 9 899999999999999999999999999999999999999999999999988777766542 23359999999999999
Q ss_pred hhhhhhhccCCCCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCcccccccc
Q 001568 826 DGPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQL 905 (1051)
Q Consensus 826 ~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 905 (1051)
|+ |+++++++++++ |+++++..++ ..+...+..|++.++.++.++++.+ .. ++ +..
T Consensus 638 d~-~~~~l~~~~~~~------~~~p~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~-~~-~~-------------~~~- 693 (755)
T TIGR01647 638 DG-TIMTIAYDNVKP------SKLPQRWNLR-EVFTMSTVLGIYLVISTFLLLAIAL-DT-SF-------------FID- 693 (755)
T ss_pred hH-hHhhccCCCCCC------CCCCCccchH-HHHHHHHHHHHHHHHHHHHHHHHHH-hc-cc-------------chh-
Confidence 96 699999999874 3332333333 4445566677777765554443322 11 00 000
Q ss_pred cccCccCCCCCccccccccCCCcccccCCCCccccccccchhHHHHHHHHHHHHHHhhhccccCCCccccCCCCChHHHH
Q 001568 906 RNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLV 985 (1051)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~t~~f~~lv~~q~~~~~~~~~~~~s~~~~~~~~N~~~~~ 985 (1051)
.|. .......++|++|..+++.|.++.+++|+++.+++. ..|+++++
T Consensus 694 -------~~~-----------------------~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~---~p~~~l~~ 740 (755)
T TIGR01647 694 -------KFG-----------------------LQLLHGNLQSLIYLQVSISGQATIFVTRTHGFFWSE---RPGKLLFI 740 (755)
T ss_pred -------ccc-----------------------ccccHhhhHHHHHHHHHHHHHHHHheeccCCCCccc---CCcHHHHH
Confidence 000 000122468999999999999999999997766533 35788888
Q ss_pred HHHHHHHHHHHH
Q 001568 986 AMSVSLGLHCLI 997 (1051)
Q Consensus 986 ~i~~~~~l~~~i 997 (1051)
++++..++.+++
T Consensus 741 ~~~~~~~~~~~~ 752 (755)
T TIGR01647 741 AFVIAQIIATFI 752 (755)
T ss_pred HHHHHHHHHHHH
Confidence 887777766554
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-111 Score=1072.34 Aligned_cols=904 Identities=23% Similarity=0.265 Sum_probs=665.2
Q ss_pred cCCCCCCCCCCCCH---HHHHHHHhhhHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccchhhhHHHHHHHHHHHHHHHH
Q 001568 40 YGWNELDKEKGKPL---WQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQE 116 (1051)
Q Consensus 40 ~G~N~i~~~~~~~~---~~~l~~~f~~~~~~~ll~~~ils~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~~ 116 (1051)
|..|.+.+.||+.+ |+.+++||+++.|+||++++++++++.+.+. +.+ .++.|++ ++++++.+.+.+++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~-----~~~-t~~~pL~--~v~~~~~~~~~~ed 72 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPT-----YRG-TSIVPLA--FVLIVTAIKEAIED 72 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC-----Ccc-HhHHhHH--HHHHHHHHHHHHHH
Confidence 67899999999886 8999999999999999999999998765432 222 3333333 33334455666666
Q ss_pred hHHHHHHHHHHhhcCceeEEEEC-CeeceEeeCCCccCCcEEEeCCCCcccccEEEEEecC--CceEEeccCCCCCCccc
Q 001568 117 SNAEKALEALKKIQCESGKVLRD-GYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKT--SSLRVEQSSLTGEAMPI 193 (1051)
Q Consensus 117 ~~~~~~~~~l~~~~~~~~~V~r~-g~~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~~~~--g~~~Vdes~LTGEs~pv 193 (1051)
+++.++-+. ...+.++|+|+ |++ ++++|+||+|||+|.|++||+||||++|+++++ |.|.||||+|||||+|+
T Consensus 73 ~~r~~~d~~---~n~~~~~v~~~~~~~-~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~ 148 (1057)
T TIGR01652 73 IRRRRRDKE---VNNRLTEVLEGHGQF-VEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLK 148 (1057)
T ss_pred HHHHHhHHH---HhCcEEEEECCCCcE-EEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecce
Confidence 665554433 34578999997 788 899999999999999999999999999998543 77999999999999999
Q ss_pred ccCCCCCCC-------------------C----------------cccccccccEEEeccEEEe-ceEEEEEEEeccchh
Q 001568 194 LKGTSPVFL-------------------D----------------DCELQAKENMVFAGTTVVN-GSCVCIVINTGMNTE 237 (1051)
Q Consensus 194 ~K~~~~~~~-------------------~----------------~~~~~~~~~~l~aGt~v~~-g~~~~~V~~tG~~T~ 237 (1051)
.|.+.+... + ...+.+.+|++++||.+.+ |+++|+|++||.+|+
T Consensus 149 ~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk 228 (1057)
T TIGR01652 149 LRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTK 228 (1057)
T ss_pred EeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhh
Confidence 998643211 0 1123456799999999999 999999999999999
Q ss_pred hhHHHHHHhhccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcc----cccchhhHHHHHHH
Q 001568 238 IGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPAN----VQFSFEKCTYYFKI 313 (1051)
Q Consensus 238 ~g~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 313 (1051)
+++.. ... +.++++++++++++...++.+.+++|++++++...+.... ....|... ........+..+..
T Consensus 229 ~~~n~---~~~--~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~ 302 (1057)
T TIGR01652 229 LMRNA---TQA--PSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAH-GKDLWYIRLDVSERNAAANGFFSFLT 302 (1057)
T ss_pred hhhcC---CCC--cccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheeccc-CCCccceecCcccccchhHHHHHHHH
Confidence 87643 233 6678999999999999988888888877776643322110 00123211 01111233445777
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHhh------HHhhhc----CcccccCccccccCceeEEecCCCcccccCCeEEEEEEe
Q 001568 314 AVALAVAAIPEGLPAVITTCLALGT------RKMAQK----NAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFT 383 (1051)
Q Consensus 314 ~i~ll~~~iP~~L~~~~~~~~~~~~------~~l~~~----~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~ 383 (1051)
++.++..++|++|++++++++.+++ ++|.++ ++.+|+++++|+||+|++||+|||||||+|+|++++++.
T Consensus 303 ~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i 382 (1057)
T TIGR01652 303 FLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSI 382 (1057)
T ss_pred HHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEE
Confidence 8899999999999999999999998 788764 499999999999999999999999999999999999998
Q ss_pred cCCcccceeeE----eecCcc-cCCCC-------CCc-c-C-----C--CCCCChHHHHHHHHHHhhhccCcccc-CCC-
Q 001568 384 LGRKTTISRIF----HVEGTT-YDPKD-------GGI-V-D-----W--PCYNMDANLQAMAKICAVCNDAGVYC-DGP- 440 (1051)
Q Consensus 384 ~~~~~~~~~~~----~~~~~~-~~~~~-------~~~-~-~-----~--~~~~~~~~~~~~~~~~~~c~~~~~~~-~~~- 440 (1051)
.+..+...... ..+... +.+.. ... . + . .....++...+++.++++||++.+.. +++
T Consensus 383 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~ 462 (1057)
T TIGR01652 383 AGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGP 462 (1057)
T ss_pred CCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCC
Confidence 76544211000 000000 00000 000 0 0 0 00112244677889999999987764 221
Q ss_pred --cccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhhhcccccccccccccccccccceeEeecCCCCCceEEEEE
Q 001568 441 --LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIV 518 (1051)
Q Consensus 441 --~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~rk~msviv 518 (1051)
..+..+||+|.||+++|+..|+.+..++.... .......+....|++++.+||+|+||||||++
T Consensus 463 ~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~--------------~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv 528 (1057)
T TIGR01652 463 EEITYQAASPDEAALVKAARDVGFVFFERTPKSI--------------SLLIEMHGETKEYEILNVLEFNSDRKRMSVIV 528 (1057)
T ss_pred CceEEEccCCcHHHHHHHHHHCCCEEEEecCCce--------------EEEEEeCCCEEEEEEEEecccCCCCCeEEEEE
Confidence 34667999999999999999987654321100 00000112245789999999999999999999
Q ss_pred ecCCCcEEEEEcCChhHHHhhccccccCCCceecCCHHHHHHHHHHHHHHhhccceEEEEEEeccccc-cccccccCccc
Q 001568 519 REPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGE-FSDYYSESHPA 597 (1051)
Q Consensus 519 ~~~~~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~a~k~l~~~-~~~~~~~~~~~ 597 (1051)
+++++++.+|+|||||.|+++|+.. +++.++.+.+++++|+.+|+||+++|||.++++ +.+|..+...+
T Consensus 529 ~~~~~~~~l~~KGA~e~il~~~~~~----------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a 598 (1057)
T TIGR01652 529 RNPDGRIKLLCKGADTVIFKRLSSG----------GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEA 598 (1057)
T ss_pred EeCCCeEEEEEeCcHHHHHHHhhcc----------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHH
Confidence 9888889999999999999999731 234567788999999999999999999999865 22222111111
Q ss_pred ccc-----cCCCccccccCCCeEEEEEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCc-
Q 001568 598 HKK-----LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDL- 671 (1051)
Q Consensus 598 ~~~-----~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~- 671 (1051)
... ...+..++++|+|++|+|+++++||+|++++++|+.|++|||++||+|||+.+||.++|++||+.+.+...
T Consensus 599 ~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~ 678 (1057)
T TIGR01652 599 STALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQI 678 (1057)
T ss_pred HhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEE
Confidence 000 01122345689999999999999999999999999999999999999999999999999999998754321
Q ss_pred ------------------------------------cccccCchHHhcCCHH----HHHHHHHhcCCeEEEEeCchhHHH
Q 001568 672 ------------------------------------TGRSFTGKEFMALSST----QQIEALSKHGGKVFSRAEPRHKQE 711 (1051)
Q Consensus 672 ------------------------------------~~~~~~g~~~~~l~~~----~~~~~~~~~~~~v~~r~~p~~K~~ 711 (1051)
...+++|++++.+.++ ++.+++..|+.+||||++|+||.+
T Consensus 679 ~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~ 758 (1057)
T TIGR01652 679 VITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKAD 758 (1057)
T ss_pred EEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHH
Confidence 0136788888754443 345567777888999999999999
Q ss_pred HHHHHhhc-CCEEEEEcCCccCHHHHHhCCeeEEeCCCccH--HHHhccCeeecCCCchHHHHHH-HHHHHHHHhHHHHH
Q 001568 712 IVRMLKEM-GEVVAMTGDGVNDAPALKLADIGVAMGITGTE--VAKEASDMVLADDNFGSIVSAV-AEGRSIYNNMKAFI 787 (1051)
Q Consensus 712 iv~~l~~~-g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~--~a~~~ad~~l~~~~~~~i~~~i-~~gR~~~~~i~~~~ 787 (1051)
+|+.+|++ |++|+|+|||+||+|||++||||| |+.|+| .|+.+||+++.+ |+.+.+++ .|||++|.|+++++
T Consensus 759 IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGI--gi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i 834 (1057)
T TIGR01652 759 VVRLVKKSTGKTTLAIGDGANDVSMIQEADVGV--GISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMI 834 (1057)
T ss_pred HHHHHHhcCCCeEEEEeCCCccHHHHhhcCeee--EecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHH
Confidence 99999998 999999999999999999999999 557888 489999999986 99999996 89999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC---CCchhHHHHHHHHHHHhhhhhhhccCC--CCCcccccCCCC----CCCCCCcchH
Q 001568 788 RYMISSNVGEVISIFLTAALGI---PECLIPVQLLWVNLVTDGPPATALGFN--PADVDIMQKPPR----KIDDALINSW 858 (1051)
Q Consensus 788 ~~~~~~n~~~~~~~~~~~~~~~---~~~~~~~~~l~~n~~~~~~~~l~l~~~--~~~~~~~~~~p~----~~~~~~~~~~ 858 (1051)
.|.+++|++++++++++.++.. .+++++++++|+|++++.+|++++|.. ++++++|.++|+ .+++++++.+
T Consensus 835 ~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~ 914 (1057)
T TIGR01652 835 LYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTK 914 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHH
Confidence 9999999999999999887632 247899999999999999999999874 555789999998 5677899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCcccccccccccCccCCCCCccccccccCCCcccccCCCCcc
Q 001568 859 VLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDY 938 (1051)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 938 (1051)
.|+.|++.|++++++++++.++.+.....+ .+|.. .++
T Consensus 915 ~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~------------------------------------~~g~~------~~~ 952 (1057)
T TIGR01652 915 TFWGWMLDGIYQSLVIFFFPMFAYILGDFV------------------------------------SSGSL------DDF 952 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCccc------------------------------------cCCcc------cch
Confidence 999999999999987664433322211000 01110 011
Q ss_pred ccccccchhHHHHHHHHHHHHHHhhhccccCCCccccCCCCChHHHHHHHHHHHHHHHHHhc-c---ccc---ccccccc
Q 001568 939 FTIGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYV-P---FLA---DVFGVVP 1011 (1051)
Q Consensus 939 ~~~~~~~a~t~~f~~lv~~q~~~~~~~~~~~~s~~~~~~~~N~~~~~~i~~~~~l~~~i~~v-p---~~~---~~f~~~~ 1011 (1051)
....++.|+++++...+..+. ....| +++.++++++++++.+++.++ + ... ..+...-
T Consensus 953 -----~~~~~~~~~~~~~~~~~~~~~---------~~~~w-t~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1017 (1057)
T TIGR01652 953 -----SSVGVIVFTALVVIVNLKIAL---------EINRW-NWISLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVM 1017 (1057)
T ss_pred -----hhHHHHHHHHHHHHHHHHHHH---------HHhHh-HHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHH
Confidence 123455566555554444321 11223 245556666666665543322 1 111 1122222
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhccccchh
Q 001568 1012 LNLNEWFLVILVSAPVILIDEVLKFVGRNRRLSGK 1046 (1051)
Q Consensus 1012 l~~~~w~~~l~~~~~~l~i~e~~K~~~R~~~~~~~ 1046 (1051)
-++..|+.+++..++.++.+-++|+++|.+.++..
T Consensus 1018 ~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~ 1052 (1057)
T TIGR01652 1018 GTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDY 1052 (1057)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 46779999999999999999999999998887654
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-108 Score=1026.88 Aligned_cols=795 Identities=21% Similarity=0.226 Sum_probs=608.9
Q ss_pred hhcCCCCCCCCCCCC---HHHHHHHHhhhHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccchhhhHHHHHHHHHHHHHH
Q 001568 38 ERYGWNELDKEKGKP---LWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVW 114 (1051)
Q Consensus 38 ~~~G~N~i~~~~~~~---~~~~l~~~f~~~~~~~ll~~~ils~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~i~~~ 114 (1051)
.+|..|.+.+.||+. +++.+++||+++.|+||++++++++++.+... +.+.++++.++++++..+..+++.+
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~-----~~~t~~~PL~~vl~v~~ike~~Ed~ 159 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF-----GRGASILPLAFVLLVTAVKDAYEDW 159 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC-----CcchHHHHHHHHHHHHHHHHHHHHH
Confidence 369999999999986 68899999999999999999999998765433 2344444444455555566666666
Q ss_pred HHhHHHHHHHHHHhhcCceeEEEECCeeceEeeCCCccCCcEEEeCCCCcccccEEEEEec--CCceEEeccCCCCCCcc
Q 001568 115 QESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALK--TSSLRVEQSSLTGEAMP 192 (1051)
Q Consensus 115 ~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~~~--~g~~~Vdes~LTGEs~p 192 (1051)
.++++++.. +++.++|+|+|++ ++++|++|+|||+|+|++||+||||+++++++ +|.|+||||+|||||+|
T Consensus 160 ~r~k~d~~~------N~~~~~v~~~~~~-~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~ 232 (1178)
T PLN03190 160 RRHRSDRIE------NNRLAWVLVDDQF-QEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNL 232 (1178)
T ss_pred HHHHhHHhh------cCcEEEEEECCeE-EEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeee
Confidence 666665543 3568999999999 89999999999999999999999999999754 37899999999999999
Q ss_pred cccCCCCCCC-----------------C---------------cccccccccEEEeccEEEec-eEEEEEEEeccchhhh
Q 001568 193 ILKGTSPVFL-----------------D---------------DCELQAKENMVFAGTTVVNG-SCVCIVINTGMNTEIG 239 (1051)
Q Consensus 193 v~K~~~~~~~-----------------~---------------~~~~~~~~~~l~aGt~v~~g-~~~~~V~~tG~~T~~g 239 (1051)
+.|.+.+... + .....+.+|++++||.+.+. +++|+|++||++|++.
T Consensus 233 k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~ 312 (1178)
T PLN03190 233 KTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAM 312 (1178)
T ss_pred eEecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHh
Confidence 9998753211 0 01123457999999999986 8999999999999863
Q ss_pred HHHHHHhhccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc---ccCCCCccc--------ccch----
Q 001568 240 KIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWD---VVDGWPANV--------QFSF---- 304 (1051)
Q Consensus 240 ~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--------~~~~---- 304 (1051)
. +....+.+.+++++++|++...++.+.+++|+++.++...+..... ....|.... ....
T Consensus 313 ~-----N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 387 (1178)
T PLN03190 313 L-----NNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWG 387 (1178)
T ss_pred h-----cCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhh
Confidence 2 2222256889999999999999888888888777665432211000 001121110 0000
Q ss_pred hhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHHhhhcC----------cccccCccccccCceeEEecCCCcccccC
Q 001568 305 EKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKN----------AIVRKLPSVETLGCTTVICSDKTGTLTTN 374 (1051)
Q Consensus 305 ~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~----------i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n 374 (1051)
......|..++.++..+||++|++++++++..++..|..+. +.+|+.+.+|+||+|++||+|||||||+|
T Consensus 388 ~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N 467 (1178)
T PLN03190 388 WEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTEN 467 (1178)
T ss_pred HHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccc
Confidence 11133344556777899999999999999988888876544 78999999999999999999999999999
Q ss_pred CeEEEEEEecCCcccceee--------E--eecCcccCCCCCCcc-----CC---C-CCCChHHHHHHHHHHhhhccCcc
Q 001568 375 QMSVTEFFTLGRKTTISRI--------F--HVEGTTYDPKDGGIV-----DW---P-CYNMDANLQAMAKICAVCNDAGV 435 (1051)
Q Consensus 375 ~m~v~~~~~~~~~~~~~~~--------~--~~~~~~~~~~~~~~~-----~~---~-~~~~~~~~~~~~~~~~~c~~~~~ 435 (1051)
+|++++++..+..+..... + ..++..+.|...... +. . .....+....++.++++||++.+
T Consensus 468 ~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~ 547 (1178)
T PLN03190 468 KMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVP 547 (1178)
T ss_pred eEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCcee
Confidence 9999999987755432110 0 011111111111000 00 0 00112345778999999999876
Q ss_pred cc--C--C----CcccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhhhcccccccccccccccccccceeEeecC
Q 001568 436 YC--D--G----PLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEF 507 (1051)
Q Consensus 436 ~~--~--~----~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F 507 (1051)
.. + + ...++.+||+|.||+++|+++|+.+..++..... ....+....|++++.+||
T Consensus 548 ~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~----------------i~~~~~~~~~~il~~~pF 611 (1178)
T PLN03190 548 IVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIV----------------IDIHGERQRFNVLGLHEF 611 (1178)
T ss_pred eccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEE----------------EeeccceecceeEEEecc
Confidence 42 1 1 1236677999999999999999987665432110 011223568999999999
Q ss_pred CCCCceEEEEEecCCCcEEEEEcCChhHHHhhccccccCCCceecCCHHHHHHHHHHHHHHhhccceEEEEEEeccccc-
Q 001568 508 DRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGE- 586 (1051)
Q Consensus 508 ~s~rk~msviv~~~~~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~a~k~l~~~- 586 (1051)
+|+||||||+++.++++..+|+|||||.|+++|+... +++.++.+.+++++|+++|+|||++|||.++++
T Consensus 612 ~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e 682 (1178)
T PLN03190 612 DSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSE 682 (1178)
T ss_pred cccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHH
Confidence 9999999999998888899999999999999997432 233567788999999999999999999999765
Q ss_pred cccccccCcccc-----cccCCCccccccCCCeEEEEEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH
Q 001568 587 FSDYYSESHPAH-----KKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ 661 (1051)
Q Consensus 587 ~~~~~~~~~~~~-----~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~ 661 (1051)
+.+|..+...+. .+...+...+++|+||+++|+++++|++|++++++|+.|+++||++||+|||+.+||.+||++
T Consensus 683 ~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s 762 (1178)
T PLN03190 683 FEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYS 762 (1178)
T ss_pred HhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
Confidence 333322111110 111112334668999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCc---------------------------------------------cccccCchHHhcCCH----HHHHHH
Q 001568 662 IKLFSGNEDL---------------------------------------------TGRSFTGKEFMALSS----TQQIEA 692 (1051)
Q Consensus 662 ~gi~~~~~~~---------------------------------------------~~~~~~g~~~~~l~~----~~~~~~ 692 (1051)
|||.+++... ...+++|.++..+.+ +++.++
T Consensus 763 ~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l 842 (1178)
T PLN03190 763 SKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQL 842 (1178)
T ss_pred hCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHH
Confidence 9998654210 014677888876654 456677
Q ss_pred HHhcCCeEEEEeCchhHHHHHHHHhhc-CCEEEEEcCCccCHHHHHhCCeeEEeCCCccH--HHHhccCeeecCCCchHH
Q 001568 693 LSKHGGKVFSRAEPRHKQEIVRMLKEM-GEVVAMTGDGVNDAPALKLADIGVAMGITGTE--VAKEASDMVLADDNFGSI 769 (1051)
Q Consensus 693 ~~~~~~~v~~r~~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~--~a~~~ad~~l~~~~~~~i 769 (1051)
+.+|+++||||++|+||+++|+.+|++ +++|+|||||+||++||++||||| |++|+| .|..+||+++.+ |+.+
T Consensus 843 ~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~~--Fr~L 918 (1178)
T PLN03190 843 ASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMGQ--FRFL 918 (1178)
T ss_pred HHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchhh--hHHH
Confidence 888888999999999999999999998 589999999999999999999999 778999 689999999988 9999
Q ss_pred HHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CchhHHHHHHHHHHHhhhhhhhccCCCCC--cccc
Q 001568 770 VSA-VAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIP---ECLIPVQLLWVNLVTDGPPATALGFNPAD--VDIM 843 (1051)
Q Consensus 770 ~~~-i~~gR~~~~~i~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~~~~~l~~n~~~~~~~~l~l~~~~~~--~~~~ 843 (1051)
.++ +.|||++|.|+.+++.|.||+|+++++++|++.++... +.++++.+.++|++++.+|.+++|..+.| ++.+
T Consensus 919 ~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l 998 (1178)
T PLN03190 919 VPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTL 998 (1178)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHH
Confidence 998 57999999999999999999999999999999887433 45678889999999999999999888776 3455
Q ss_pred cCCCC----CCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 001568 844 QKPPR----KIDDALINSWVLLRYLVIGSYVGIATVGIF 878 (1051)
Q Consensus 844 ~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (1051)
.+.|. .++...++.+.|+.|++.|++++++++++.
T Consensus 999 ~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~ 1037 (1178)
T PLN03190 999 LKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVP 1037 (1178)
T ss_pred HhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 66675 345678899999999999999998766443
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-98 Score=852.10 Aligned_cols=764 Identities=22% Similarity=0.309 Sum_probs=570.8
Q ss_pred CCCCCHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccchhhhHHHH
Q 001568 25 DKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLI 104 (1051)
Q Consensus 25 ~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~ils~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 104 (1051)
.+||+.+++.+|+..||+|.+..+. +++++++.++-.+|++++ .++|+++|+.+. +++.+.+|+++
T Consensus 158 ~~gL~~~~~~~r~~iyG~N~i~l~i-k~i~~iLv~EvL~PfYlF----Q~fSv~lW~~d~---------Y~~YA~cI~ii 223 (1140)
T KOG0208|consen 158 SNGLERQEIIDRRIIYGRNVISLPI-KSISQILVKEVLNPFYLF----QAFSVALWLADS---------YYYYAFCIVII 223 (1140)
T ss_pred cCCccHHHHHhHHhhcCCceeeeec-ccHHHHHHHhccchHHHH----HhHHhhhhhccc---------chhhhhHHHHH
Confidence 5799999999999999999999875 489999999988888654 566677776654 44556778888
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhhcCceeEEEECCeeceEeeCCCccCCcEEEeCC-CCcccccEEEEEecCCceEEec
Q 001568 105 LVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGV-GDKVPADMRVAALKTSSLRVEQ 183 (1051)
Q Consensus 105 ~~i~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~~I~~~~Lv~GDII~l~~-G~~vPaD~~ll~~~~g~~~Vde 183 (1051)
.+.+..+..|+.++.++.++++-+. +..|+|+|||.+ ++|.++|||||||+.+.+ |-..|||++|+ +|+|.|||
T Consensus 224 sv~Si~~sv~e~r~qs~rlr~mv~~-~~~V~V~R~g~~-~ti~S~eLVPGDil~i~~~~~~~PcDa~Li---~g~civNE 298 (1140)
T KOG0208|consen 224 SVYSIVLSVYETRKQSIRLRSMVKF-TCPVTVIRDGFW-ETVDSSELVPGDILYIPPPGKIMPCDALLI---SGDCIVNE 298 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEECCEE-EEEeccccccccEEEECCCCeEeecceEEE---eCcEEeec
Confidence 8888899999999999988888764 358999999999 999999999999999998 89999999999 69999999
Q ss_pred cCCCCCCcccccCCCCCCCC------cccccccccEEEeccEEEe------ceEEEEEEEeccchhhhHHHHHHhhcccc
Q 001568 184 SSLTGEAMPILKGTSPVFLD------DCELQAKENMVFAGTTVVN------GSCVCIVINTGMNTEIGKIQKQIHDASLE 251 (1051)
Q Consensus 184 s~LTGEs~pv~K~~~~~~~~------~~~~~~~~~~l~aGt~v~~------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~ 251 (1051)
|+|||||.|+.|.+.+.... .....+.+|.+|+||.+++ +.+.++|++||.+|..|++.+++..+ +
T Consensus 299 smLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyP--k 376 (1140)
T KOG0208|consen 299 SMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYP--K 376 (1140)
T ss_pred ccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCC--C
Confidence 99999999999998762211 1223456899999999986 57999999999999999999999877 3
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhHHHHHHHHHHHHHHhcCCchHHHHH
Q 001568 252 ESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVIT 331 (1051)
Q Consensus 252 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~ 331 (1051)
+++++-.-|.+ .+...+.+++++.++.....+.. .+. ..-..+++++.++++.+|++||++++
T Consensus 377 --P~~fkfyrds~--~fi~~l~~ia~~gfiy~~i~l~~----~g~---------~~~~iiirsLDliTi~VPPALPAalt 439 (1140)
T KOG0208|consen 377 --PVNFKFYRDSF--KFILFLVIIALIGFIYTAIVLNL----LGV---------PLKTIIIRSLDLITIVVPPALPAALT 439 (1140)
T ss_pred --CcccHHHHHHH--HHHHHHHHHHHHHHHHHhHhHHH----cCC---------CHHHHhhhhhcEEEEecCCCchhhhh
Confidence 33333333333 23333333333333322222111 111 12345778899999999999999999
Q ss_pred HHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCcccceeeEeecCcccCCCCCCccCC
Q 001568 332 TCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDW 411 (1051)
Q Consensus 332 ~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (1051)
++..++.+||.|+||+|-+++.+...|++|++|||||||||++.+.+..+....+............... .....+.
T Consensus 440 vG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~---~~~~~~l 516 (1140)
T KOG0208|consen 440 VGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDS---LQLFYKL 516 (1140)
T ss_pred HHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhh---ccceeec
Confidence 9999999999999999999999999999999999999999999999999887543211110000000000 0000000
Q ss_pred CCCCChHHHHHHHHHHhhhccCccccCCCcccccCCchHHHHHHHHHHcCCCCCCCCcccc-h--hhhhhhhcccccccc
Q 001568 412 PCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKIS-D--TQLAANYLIDSSTVR 488 (1051)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~-~--~~~~~~~~~~~~~~~ 488 (1051)
...+.......+..+++.||+.... ++ ...|||.|.-+++. .|+.+........ . .+....-.+.++...
T Consensus 517 ~~~~~~~~~~~~~~a~atCHSL~~v-~g---~l~GDPLdlkmfe~---t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~ 589 (1140)
T KOG0208|consen 517 SLRSSSLPMGNLVAAMATCHSLTLV-DG---TLVGDPLDLKMFES---TGWVYEEADIEDEATREFNTLIPTVVRPPENA 589 (1140)
T ss_pred cccccCCchHHHHHHHhhhceeEEe-CC---eeccCceeeeeeec---cceEEEeccccchhhhhhCCccCCEeCCCccc
Confidence 0011111234677888999954332 11 34688888766643 3443321100000 0 000000011111100
Q ss_pred -cccccccccccceeEeecCCCCCceEEEEEecC-CCcEEEEEcCChhHHHhhccccccCCCceecCCHHHHHHHHHHHH
Q 001568 489 -LGCCEWWTKRSKRVATLEFDRIRKSMSVIVREP-TGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHL 566 (1051)
Q Consensus 489 -~~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~-~~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~ 566 (1051)
....+.-.+.+.+++.+||+|.-+|||||+..+ +.+..+|+|||||.|.+.|+....+ +.+.+.++
T Consensus 590 ~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP------------~dy~evl~ 657 (1140)
T KOG0208|consen 590 FNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVP------------ADYQEVLK 657 (1140)
T ss_pred ccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCC------------ccHHHHHH
Confidence 000111122688999999999999999999975 4678999999999999999864432 34788999
Q ss_pred HHhhccceEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChhHHHHHHHHHhCCcEEEE
Q 001568 567 EMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMV 646 (1051)
Q Consensus 567 ~~a~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~ 646 (1051)
.|+.+|+||+|+|+|.++.. .| .......++.+|+|++|+|++.||+++|++++.+|++|.+|+||++|
T Consensus 658 ~Yt~~GfRVIAlA~K~L~~~--~~---------~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVM 726 (1140)
T KOG0208|consen 658 EYTHQGFRVIALASKELETS--TL---------QKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVM 726 (1140)
T ss_pred HHHhCCeEEEEEecCccCcc--hH---------HHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEE
Confidence 99999999999999988632 01 01123457788999999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCCCCCCCCcc---------------------------------------------------ccc
Q 001568 647 ITGDNKSTAEAICRQIKLFSGNEDLT---------------------------------------------------GRS 675 (1051)
Q Consensus 647 ~TGd~~~ta~~ia~~~gi~~~~~~~~---------------------------------------------------~~~ 675 (1051)
+||||..||..+||+||++.+...+. ..+
T Consensus 727 cTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA 806 (1140)
T KOG0208|consen 727 CTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLA 806 (1140)
T ss_pred EcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEE
Confidence 99999999999999999987643210 113
Q ss_pred cCchHHhcCC---HHHHHHHHHhcCCeEEEEeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCccHH
Q 001568 676 FTGKEFMALS---STQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752 (1051)
Q Consensus 676 ~~g~~~~~l~---~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~ 752 (1051)
++|+.++-+. .+.+..++. +..|||||+|+||.++|+.+|+.|+.|+|||||+||+.|||+|||||+++ .. .
T Consensus 807 ~sG~~f~~i~~~~~~l~~~Il~--~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLS--ea-E 881 (1140)
T KOG0208|consen 807 MSGKTFQVILEHFPELVPKILL--KGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLS--EA-E 881 (1140)
T ss_pred ecCchhHHHHhhcHHHHHHHHh--cCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchh--hh-h
Confidence 4455544332 344556666 77899999999999999999999999999999999999999999999885 33 3
Q ss_pred HHhccCeeecCCCchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhhhh
Q 001568 753 AKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATA 832 (1051)
Q Consensus 753 a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~l~ 832 (1051)
|.-||.+.-.-.+++++++.|+|||+.+.....+++|+..+++..++..++.. .....++..|.++++++...+.+++
T Consensus 882 ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~LY--~~~~nl~D~Qfl~iDLlii~pia~~ 959 (1140)
T KOG0208|consen 882 ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVFLY--LINSNLGDLQFLFIDLLIITPIAVM 959 (1140)
T ss_pred HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhheee--eecccccchhhhhhHHHHHHHHHHH
Confidence 67789999998899999999999999999999999999998877655544332 3346789999999999999999999
Q ss_pred ccCCCCCcccccCCCCCCCCCCcchHHHHHHHHHHHH
Q 001568 833 LGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSY 869 (1051)
Q Consensus 833 l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 869 (1051)
++.+++..++-..+|.. .+++++.+...+.+.++
T Consensus 960 m~~~~a~~~L~~~rP~~---~L~s~~~~~~l~~q~vl 993 (1140)
T KOG0208|consen 960 MSRFDASDKLFPKRPPT---NLLSKKILVPLLLQIVL 993 (1140)
T ss_pred HccCcHHHHhcCCCCCc---cccccchhhhhHHHHHH
Confidence 99999998887776654 57777776666554443
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-100 Score=913.41 Aligned_cols=906 Identities=22% Similarity=0.247 Sum_probs=670.9
Q ss_pred HHhhcCCCCCCCCCCCC---HHHHHHHHhhhHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccchhhhHHHHHHHHHHHH
Q 001568 36 RRERYGWNELDKEKGKP---LWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVG 112 (1051)
Q Consensus 36 r~~~~G~N~i~~~~~~~---~~~~l~~~f~~~~~~~ll~~~ils~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~i~ 112 (1051)
+..+|-.|.+.+.||+. +++.+++||++..|+||++++++++++ +.+ .+.+...++.++++.+..+...++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~-----~~~~~~~~pl~~vl~~t~iKd~~e 101 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSP-----FNPYTTLVPLLFVLGITAIKDAIE 101 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccc-----cCccceeeceeeeehHHHHHHHHh
Confidence 55699999999999986 799999999999999999999999998 432 234444444455555656666666
Q ss_pred HHHHhHHHHHHHHHHhhcCceeEEEECCe-eceEeeCCCccCCcEEEeCCCCcccccEEEEEec--CCceEEeccCCCCC
Q 001568 113 VWQESNAEKALEALKKIQCESGKVLRDGY-LVPDLPAIGLVPGDIVELGVGDKVPADMRVAALK--TSSLRVEQSSLTGE 189 (1051)
Q Consensus 113 ~~~~~~~~~~~~~l~~~~~~~~~V~r~g~-~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~~~--~g~~~Vdes~LTGE 189 (1051)
.|.+++.++. .+..++.|.|++. + ++..|++|++||+|++..++.+|||.+++.++ .|.|+|++++|+||
T Consensus 102 D~rR~~~D~~------iN~~~~~v~~~~~~~-~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGE 174 (1151)
T KOG0206|consen 102 DYRRHKQDKE------VNNRKVEVLRGDGCF-VEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGE 174 (1151)
T ss_pred hhhhhhccHH------hhcceeEEecCCcee-eeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCc
Confidence 6655555543 3456789998644 6 89999999999999999999999999999754 78899999999999
Q ss_pred CcccccCCCCCCCC---------------------------------ccc-ccccccEEEeccEEEec-eEEEEEEEecc
Q 001568 190 AMPILKGTSPVFLD---------------------------------DCE-LQAKENMVFAGTTVVNG-SCVCIVINTGM 234 (1051)
Q Consensus 190 s~pv~K~~~~~~~~---------------------------------~~~-~~~~~~~l~aGt~v~~g-~~~~~V~~tG~ 234 (1051)
++.+.|...+.... ... +...++++++|+++.++ +++|+|++||+
T Consensus 175 tnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~ 254 (1151)
T KOG0206|consen 175 TNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGH 254 (1151)
T ss_pred cccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCC
Confidence 99999876332210 001 55678999999999996 78999999999
Q ss_pred chhhhHHHHHHhhccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc-ccc-CCCCcccccchhhHHHHHH
Q 001568 235 NTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSW-DVV-DGWPANVQFSFEKCTYYFK 312 (1051)
Q Consensus 235 ~T~~g~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~ 312 (1051)
+|+.++.. ..+ +.+++++++.++.....++.+.+.++++..+......... ... ..|..............|.
T Consensus 255 dtK~~~n~---~~~--~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 329 (1151)
T KOG0206|consen 255 DTKLMQNS---GKP--PSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFL 329 (1151)
T ss_pred cchHHHhc---CCC--ccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHH
Confidence 99986543 223 7788999999999888887777777776665443322110 000 1121111111223345566
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHhhHHh----------hhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEE
Q 001568 313 IAVALAVAAIPEGLPAVITTCLALGTRKM----------AQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFF 382 (1051)
Q Consensus 313 ~~i~ll~~~iP~~L~~~~~~~~~~~~~~l----------~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~ 382 (1051)
.++.++...+|.+|++++.+...+++..+ ....+.+|+.+..|+||+|++|++|||||||+|.|.+++|.
T Consensus 330 t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCs 409 (1151)
T KOG0206|consen 330 TFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCS 409 (1151)
T ss_pred HHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeeccc
Confidence 77888999999999999999998886443 23468999999999999999999999999999999999999
Q ss_pred ecCCcccceeeEe----ecCc-----ccCCCCCCc-----cCCCC--CCChHHHHHHHHHHhhhccCccccC-C--Cccc
Q 001568 383 TLGRKTTISRIFH----VEGT-----TYDPKDGGI-----VDWPC--YNMDANLQAMAKICAVCNDAGVYCD-G--PLFR 443 (1051)
Q Consensus 383 ~~~~~~~~~~~~~----~~~~-----~~~~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~c~~~~~~~~-~--~~~~ 443 (1051)
+.+..+....... .... ...+.+... .+... ....+..+.+..++++||++.++.+ + ...|
T Consensus 410 i~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y 489 (1151)
T KOG0206|consen 410 INGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSY 489 (1151)
T ss_pred ccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceee
Confidence 9887664322110 0000 000000000 01000 1244567789999999999988872 2 3578
Q ss_pred ccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhhhcccccccccccccccccccceeEeecCCCCCceEEEEEecCCC
Q 001568 444 ATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTG 523 (1051)
Q Consensus 444 ~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~~~ 523 (1051)
+..+|+|.|++..|++.|+.+..++..... +. ..+.++.|++++.++|+|.|||||||||.++|
T Consensus 490 ~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vt-------------i~---~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g 553 (1151)
T KOG0206|consen 490 EAESPDEAALVEAARELGFVFLGRTPDSVT-------------IR---ELGVEETYELLNVLEFNSTRKRMSVIVRDPDG 553 (1151)
T ss_pred ecCCCcHHHHHHHHHhcCceeeeccCceEE-------------Ee---ccccceeEEEEEEeccccccceeEEEEEcCCC
Confidence 899999999999999999988665432110 00 11135789999999999999999999999999
Q ss_pred cEEEEEcCChhHHHhhccccccCCCceecCCHHHHHHHHHHHHHHhhccceEEEEEEeccccc-cccccccCcccccccC
Q 001568 524 HNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGE-FSDYYSESHPAHKKLL 602 (1051)
Q Consensus 524 ~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~a~k~l~~~-~~~~~~~~~~~~~~~~ 602 (1051)
+..+|||||+.+|+++++. -....+++..+++++||.+|+||||+|||.++++ +..|.+...++.....
T Consensus 554 ~i~LycKGADsvI~erL~~----------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~ 623 (1151)
T KOG0206|consen 554 RILLYCKGADSVIFERLSK----------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLT 623 (1151)
T ss_pred cEEEEEcCcchhhHhhhhh----------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999974 1345677788899999999999999999999988 4444444333322222
Q ss_pred -----CCccccccCCCeEEEEEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCc------
Q 001568 603 -----DPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDL------ 671 (1051)
Q Consensus 603 -----~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~------ 671 (1051)
.++.++.+|+||+++|.+++||+++++|+++|+.|++||||+||+|||+.+||.+||..|++..++..+
T Consensus 624 ~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~ 703 (1151)
T KOG0206|consen 624 DREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTE 703 (1151)
T ss_pred CHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecC
Confidence 245678899999999999999999999999999999999999999999999999999999998764321
Q ss_pred -------------------------------------cccccCchHHhcCCH----HHHHHHHHhcCCeEEEEeCchhHH
Q 001568 672 -------------------------------------TGRSFTGKEFMALSS----TQQIEALSKHGGKVFSRAEPRHKQ 710 (1051)
Q Consensus 672 -------------------------------------~~~~~~g~~~~~l~~----~~~~~~~~~~~~~v~~r~~p~~K~ 710 (1051)
.+.+++|+.+....+ ..+.++...|+.++|||++|.||+
T Consensus 704 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA 783 (1151)
T KOG0206|consen 704 TSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKA 783 (1151)
T ss_pred ChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHH
Confidence 123556665543332 245567778999999999999999
Q ss_pred HHHHHHhhc-CCEEEEEcCCccCHHHHHhCCeeEEeCCCccHH--HHhccCeeecCCCchHHHHH-HHHHHHHHHhHHHH
Q 001568 711 EIVRMLKEM-GEVVAMTGDGVNDAPALKLADIGVAMGITGTEV--AKEASDMVLADDNFGSIVSA-VAEGRSIYNNMKAF 786 (1051)
Q Consensus 711 ~iv~~l~~~-g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~--a~~~ad~~l~~~~~~~i~~~-i~~gR~~~~~i~~~ 786 (1051)
.+|+..++. +.++++||||+||++|+++||||| |++|.|+ |..+||+.+.+ |+-+.++ +.|||++|.|+.++
T Consensus 784 ~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGV--GIsG~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ 859 (1151)
T KOG0206|consen 784 LVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGV--GISGQEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKM 859 (1151)
T ss_pred HHHHHHHhcCCceEEEeeCCCccchheeeCCcCe--eeccchhhhhhhcccchHHH--HHHHhhhheeecceeHHHHHHH
Confidence 999999755 889999999999999999999999 7788885 88899999998 7777776 56999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc---CCCchhHHHHHHHHHHHhhhhhhhccCCCCCc--ccccCCCCC----CCCCCcch
Q 001568 787 IRYMISSNVGEVISIFLTAALG---IPECLIPVQLLWVNLVTDGPPATALGFNPADV--DIMQKPPRK----IDDALINS 857 (1051)
Q Consensus 787 ~~~~~~~n~~~~~~~~~~~~~~---~~~~~~~~~~l~~n~~~~~~~~l~l~~~~~~~--~~~~~~p~~----~~~~~~~~ 857 (1051)
+.|+||+|+.+.+.+|++.++. ....+.++++.++|++++.+|.+++|..+.|. +.+.+.|.. ++...+++
T Consensus 860 ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~ 939 (1151)
T KOG0206|consen 860 ILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNW 939 (1151)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccch
Confidence 9999999999999999998873 34578899999999999999999999987774 466677753 44567888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCcccccccccccCccCCCCCccccccccCCCcccccCCCCc
Q 001568 858 WVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCD 937 (1051)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 937 (1051)
+.|+.|++.|++++++++++.+..+... .+ ..+|+.. +
T Consensus 940 ~~f~~~~~~g~~~sli~Ff~~~~~~~~~-~~-----------------------------------~~~G~~~------d 977 (1151)
T KOG0206|consen 940 KRFWGWMLDGFYQSLVIFFLPYLVFEEQ-AV-----------------------------------TSNGLTA------D 977 (1151)
T ss_pred HHHHHHHHHHHHhheeeeeeeHhhheee-ee-----------------------------------ccCCCcC------C
Confidence 8999999999999987654433322110 00 0111111 1
Q ss_pred cccccccchhHHHHHHHHHHHHHHhhhccccCCCccccCCCCChHHHHHHHHHHHHHHHHHhcc-----ccc------cc
Q 001568 938 YFTIGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVP-----FLA------DV 1006 (1051)
Q Consensus 938 ~~~~~~~~a~t~~f~~lv~~q~~~~~~~~~~~~s~~~~~~~~N~~~~~~i~~~~~l~~~i~~vp-----~~~------~~ 1006 (1051)
++..|...++.+ |+...+. -.+....| +|+-++++++++++.+++.++- ... .+
T Consensus 978 ~~~~G~~~~T~~-----Vivv~~~---------iaL~~~yw-T~i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~ 1042 (1151)
T KOG0206|consen 978 YWTLGTTVFTII-----VIVVNLK---------IALETSYW-TWINHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGV 1042 (1151)
T ss_pred hhhccceEEEEE-----EEEEEee---------eeeeehhe-eHHHHHHHHHHHHHHHHHHHHHhccccccCCCccHHHH
Confidence 222222222221 1111111 11233444 3666667777777666554432 111 11
Q ss_pred cccccCChhhHHHHHHHHHHHHHHHHHHHHHhhccccchh
Q 001568 1007 FGVVPLNLNEWFLVILVSAPVILIDEVLKFVGRNRRLSGK 1046 (1051)
Q Consensus 1007 f~~~~l~~~~w~~~l~~~~~~l~i~e~~K~~~R~~~~~~~ 1046 (1051)
+...--++..|+.+++.++..++.+..+|.+.|..+++.-
T Consensus 1043 ~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~ 1082 (1151)
T KOG0206|consen 1043 AEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDH 1082 (1151)
T ss_pred HHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHH
Confidence 2222246778999999999999999999999887776643
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-98 Score=812.83 Aligned_cols=871 Identities=21% Similarity=0.275 Sum_probs=651.7
Q ss_pred HHHhhcCCCCCCCCCCCC---HHHHHHHHhhhHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccchh-hhHHHHHHHHHH
Q 001568 35 KRRERYGWNELDKEKGKP---LWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEP-LVIVLILVLNAI 110 (1051)
Q Consensus 35 ~r~~~~G~N~i~~~~~~~---~~~~l~~~f~~~~~~~ll~~~ils~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~i~~~ 110 (1051)
.++++|.+|.+...||+. ++..+++||+-++|.||++.++.++++.+..+ +...|+.| +.++++.++.++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig------~l~ty~~pl~fvl~itl~kea 147 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIG------YLSTYWGPLGFVLTITLIKEA 147 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheec------chhhhhHHHHHHHHHHHHHHH
Confidence 567788999999988875 68899999999999999999999998766543 22344444 445566677777
Q ss_pred HHHHHHhHHHHHHHHHHhhcCceeEE-EECCeeceEeeCCCccCCcEEEeCCCCcccccEEEEEec--CCceEEeccCCC
Q 001568 111 VGVWQESNAEKALEALKKIQCESGKV-LRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALK--TSSLRVEQSSLT 187 (1051)
Q Consensus 111 i~~~~~~~~~~~~~~l~~~~~~~~~V-~r~g~~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~~~--~g~~~Vdes~LT 187 (1051)
++.++++++++..+ .++.++ -|+|-. ..|+++|++||+|+++.+++||||++++.++ +|+|++.+..|+
T Consensus 148 vdd~~r~~rd~~~N------se~y~~ltr~~~~--~~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLD 219 (1051)
T KOG0210|consen 148 VDDLKRRRRDRELN------SEKYTKLTRDGTR--REPSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLD 219 (1051)
T ss_pred HHHHHHHHhhhhhh------hhhheeeccCCcc--cccccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccC
Confidence 87777776665433 334444 477764 4599999999999999999999999999865 789999999999
Q ss_pred CCCcccccCCCCCCCC----------------------------------cccccccccEEEeccEEEeceEEEEEEEec
Q 001568 188 GEAMPILKGTSPVFLD----------------------------------DCELQAKENMVFAGTTVVNGSCVCIVINTG 233 (1051)
Q Consensus 188 GEs~pv~K~~~~~~~~----------------------------------~~~~~~~~~~l~aGt~v~~g~~~~~V~~tG 233 (1051)
||++.+.|-|.|.++. +.+..+-+|+++++|.+.+|.++|+|+|||
T Consensus 220 GETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG 299 (1051)
T KOG0210|consen 220 GETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTG 299 (1051)
T ss_pred CcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEec
Confidence 9999988877654321 112445589999999999999999999999
Q ss_pred cchhhhHHHHHHhhccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhHHHHHHH
Q 001568 234 MNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKI 313 (1051)
Q Consensus 234 ~~T~~g~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (1051)
.+|+. .++.+..+.+-.-++.++|.+.+.++.++++++++....... .+.| ...+.+
T Consensus 300 ~dtRs-----vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~-------~~~w-----------yi~~~R 356 (1051)
T KOG0210|consen 300 RDTRS-----VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGF-------GSDW-----------YIYIIR 356 (1051)
T ss_pred ccHHH-----HhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcC-------CCch-----------HHHHHH
Confidence 99975 244443355556678889999998887777777665443211 1445 345677
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHhhHHhhhc----CcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCccc
Q 001568 314 AVALAVAAIPEGLPAVITTCLALGTRKMAQK----NAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTT 389 (1051)
Q Consensus 314 ~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~----~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~ 389 (1051)
++.++...||.+|.+.+.++..+-.+.+..+ |.++|+++..|+||+++++.+|||||||+|+|.+++++.+.-.++
T Consensus 357 fllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s 436 (1051)
T KOG0210|consen 357 FLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYS 436 (1051)
T ss_pred HHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeecc
Confidence 7889999999999999999999988888664 678999999999999999999999999999999999997654332
Q ss_pred ceeeEeec---CcccCC---CCCCccCCCCCCChHHHHHHHHHHhhhccCccccCC--CcccccCCchHHHHHHHHHHcC
Q 001568 390 ISRIFHVE---GTTYDP---KDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDG--PLFRATGLPTEAALKVLVEKMG 461 (1051)
Q Consensus 390 ~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~--~~~~~~~~p~e~al~~~a~~~g 461 (1051)
.....++. .+.+.| ++.........+.....+.+..++++||++.+..++ ...|+..+|+|+|++++.+..|
T Consensus 437 ~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VG 516 (1051)
T KOG0210|consen 437 AETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVG 516 (1051)
T ss_pred HhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecc
Confidence 11100010 011111 111111112235566778899999999999887754 6789999999999999999999
Q ss_pred CCCCCCCcccchhhhhhhhcccccccccccccccccccceeEeecCCCCCceEEEEEecC-CCcEEEEEcCChhHHHhhc
Q 001568 462 FPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREP-TGHNQLLVKGSVESLLERS 540 (1051)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~-~~~~~~~~KGa~e~i~~~c 540 (1051)
....++... ...+.........|+++..+||+|++|||++|||++ .++...|+|||+.+|-..-
T Consensus 517 l~L~~Rd~~---------------~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iV 581 (1051)
T KOG0210|consen 517 LKLAKRDRH---------------AITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIV 581 (1051)
T ss_pred eEEeecccc---------------eEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccc
Confidence 887665321 111111122356899999999999999999999986 6889999999999887654
Q ss_pred cccccCCCceecCCHHHHHHHHHHHHHHhhccceEEEEEEeccccc-cccccccCcccccccCC-----Cccc-cccCCC
Q 001568 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGE-FSDYYSESHPAHKKLLD-----PSCY-STIESD 613 (1051)
Q Consensus 541 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~a~k~l~~~-~~~~~~~~~~~~~~~~~-----~~~~-~~ie~~ 613 (1051)
+.. +.+++...+||++|+||+++|.|.++++ +..+....+.+..+..+ .... ..+|+|
T Consensus 582 q~N---------------dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~d 646 (1051)
T KOG0210|consen 582 QYN---------------DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERD 646 (1051)
T ss_pred ccc---------------hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhh
Confidence 421 3466778899999999999999999987 44443333332222222 1122 267899
Q ss_pred eEEEEEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCcc---------------------
Q 001568 614 LVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLT--------------------- 672 (1051)
Q Consensus 614 l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~--------------------- 672 (1051)
++++|++|.||+++++++.+++.||+|||++||+|||+.+||..+|+..++.+.++.+.
T Consensus 647 lelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k 726 (1051)
T KOG0210|consen 647 LELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRK 726 (1051)
T ss_pred hHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999998766431
Q ss_pred ---ccccCchHHhc---CCHHHHHHHHHhcCCeEEEEeCchhHHHHHHHHhhc-CCEEEEEcCCccCHHHHHhCCeeEEe
Q 001568 673 ---GRSFTGKEFMA---LSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEM-GEVVAMTGDGVNDAPALKLADIGVAM 745 (1051)
Q Consensus 673 ---~~~~~g~~~~~---l~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~l~~Advgia~ 745 (1051)
..+++|+.+.- -.++++.++..++..+|+|||+|+||+++++.+|++ |+.|||||||.||+.|+++||+||
T Consensus 727 ~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~Gi-- 804 (1051)
T KOG0210|consen 727 TDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGI-- 804 (1051)
T ss_pred CCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccce--
Confidence 23556655542 234678888888999999999999999999999987 999999999999999999999999
Q ss_pred CCCccHH--HHhccCeeecCCCchHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCch---hHHHHH
Q 001568 746 GITGTEV--AKEASDMVLADDNFGSIVSA-VAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECL---IPVQLL 819 (1051)
Q Consensus 746 g~~~~~~--a~~~ad~~l~~~~~~~i~~~-i~~gR~~~~~i~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~~~l 819 (1051)
|+-|.|+ |.-|||+.+.+ |.++.++ +.|||.+|.|..+.-+|.+...+.....+.++.......|. -.+.+.
T Consensus 805 GI~gkEGkQASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~Lmv 882 (1051)
T KOG0210|consen 805 GIVGKEGKQASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMV 882 (1051)
T ss_pred eeecccccccchhccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHH
Confidence 7778875 78899999998 9999998 57999999999999999999999887777766554333333 344567
Q ss_pred HHHHHHhhhhhhhccCCC-CCcccccCCCC----CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccC
Q 001568 820 WVNLVTDGPPATALGFNP-ADVDIMQKPPR----KIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVG 894 (1051)
Q Consensus 820 ~~n~~~~~~~~l~l~~~~-~~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (1051)
.+..+++.+|.+++.++. ...++....|. ..+.+.++.+.|+.|.+++++++.+.+.++++.+-..
T Consensus 883 gysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~~e--------- 953 (1051)
T KOG0210|consen 883 GYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFDTE--------- 953 (1051)
T ss_pred HHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhhhh---------
Confidence 799999999999998864 33344444554 2455778888999999999999987765543322111
Q ss_pred CCCcccccccccccCccCCCCCccccccccCCCcccccCCCCccccccccchhHHHHHHHHHHHHHHhhhccccCCCccc
Q 001568 895 DGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLVT 974 (1051)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~t~~f~~lv~~q~~~~~~~~~~~~s~~~ 974 (1051)
+ ....++.|+++++..+.-. .+.
T Consensus 954 -------------------------------------------f-----~~ivaisFtaLi~tELiMV---------aLt 976 (1051)
T KOG0210|consen 954 -------------------------------------------F-----IHIVAISFTALILTELIMV---------ALT 976 (1051)
T ss_pred -------------------------------------------h-----eEeeeeeeHHHHHHHHHHH---------hhh
Confidence 0 1123445555555543321 122
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHhccccccccccccCChhhHHH-HHHHHHHHHHHHHHHHHHhhccccch
Q 001568 975 MPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFL-VILVSAPVILIDEVLKFVGRNRRLSG 1045 (1051)
Q Consensus 975 ~~~~~N~~~~~~i~~~~~l~~~i~~vp~~~~~f~~~~l~~~~w~~-~l~~~~~~l~i~e~~K~~~R~~~~~~ 1045 (1051)
..-| +|.++++-++++++.+ +++|++.++|....+..+.+++ ..++.++.++.--+.|+++|++.+-.
T Consensus 977 v~tw-~~~m~vae~lsL~~Yi--vsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpS 1045 (1051)
T KOG0210|consen 977 VRTW-HWLMVVAELLSLALYI--VSLAFLHEYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPS 1045 (1051)
T ss_pred hhhh-hHHHHHHHHHHHHHHH--HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc
Confidence 2223 3667777777776654 6788899888877665544333 34455666677778899999887643
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-88 Score=796.00 Aligned_cols=556 Identities=23% Similarity=0.341 Sum_probs=454.4
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccchhhhHHHHHHHHHHHHHHH----HhHHHHHHHHHHhhcCc-e
Q 001568 59 EQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQ----ESNAEKALEALKKIQCE-S 133 (1051)
Q Consensus 59 ~~f~~~~~~~ll~~~ils~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~----~~~~~~~~~~l~~~~~~-~ 133 (1051)
.+|++|+.++++++++++++++.+....+ ...+ ..+++++++++++++.+++.|+ |+|+++.+++|+++.++ +
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~-~~~~-~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~ 105 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFH-QESV-SRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMK 105 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcc-cccc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcce
Confidence 45789999999999999999887632100 1112 2245667777777777788777 68899999999998876 6
Q ss_pred eE-EEECCeeceEeeCCCccCCcEEEeCCCCcccccEEEEEecCCceEEeccCCCCCCcccccCCCCCCCCccccccccc
Q 001568 134 GK-VLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKEN 212 (1051)
Q Consensus 134 ~~-V~r~g~~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~ 212 (1051)
++ |.|||++ ++|++++|+|||+|.|++||+|||||+|++ |...||||+|||||.|+.|+++. ++ +
T Consensus 106 a~~v~rdg~~-~~I~a~eLv~GDiV~v~~Gd~IPaDG~vie---G~~~VDESaLTGES~PV~K~~g~---------d~-~ 171 (673)
T PRK14010 106 ARRIKQDGSY-EMIDASDLKKGHIVRVATGEQIPNDGKVIK---GLATVDESAITGESAPVIKESGG---------DF-D 171 (673)
T ss_pred EEEEEeCCEE-EEEEHHHcCCCCEEEECCCCcccCCeEEEE---cceEEecchhcCCCCceeccCCC---------cc-C
Confidence 76 7799998 899999999999999999999999999995 67899999999999999998751 12 3
Q ss_pred EEEeccEEEeceEEEEEEEeccchhhhHHHHHHhhccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Q 001568 213 MVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDV 292 (1051)
Q Consensus 213 ~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (1051)
.+|+||.+.+|+++++|++||.+|.+|++.++++.+ +.+++|+|..+..+...+..+ ++++++++..+..+
T Consensus 172 ~V~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a--~~~ktp~e~~l~~l~~~l~ii--~l~~~~~~~~~~~~----- 242 (673)
T PRK14010 172 NVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGA--TRKKTPNEIALFTLLMTLTII--FLVVILTMYPLAKF----- 242 (673)
T ss_pred eeecCceeecceEEEEEEEecccCHHHHHHHHHhhc--cccCCHHHHHHHHHHHHHhHH--HHHHHHHHHHHHhh-----
Confidence 499999999999999999999999999999999888 778999997766554433322 22222222111100
Q ss_pred cCCCCcccccchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccc
Q 001568 293 VDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLT 372 (1051)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT 372 (1051)
.++ ...+..++++++++|||+|+..++++...+++||+|+|+++|+.+++|+||++|+||||||||||
T Consensus 243 -~~~-----------~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT 310 (673)
T PRK14010 243 -LNF-----------NLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTIT 310 (673)
T ss_pred -ccH-----------HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCC
Confidence 011 22355667788888999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEEEEecCCcccceeeEeecCcccCCCCCCccCCCCCCChHHHHHHHHHHhhhccCccccCCCcccccCCchHHH
Q 001568 373 TNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAA 452 (1051)
Q Consensus 373 ~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~a 452 (1051)
+|++.+.++...+. ....+++..+.+|+.. ..||.+.|
T Consensus 311 ~Gn~~~~~~~~~~~-------------------------------~~~~~ll~~a~~~~~~-----------s~~P~~~A 348 (673)
T PRK14010 311 YGNRMADAFIPVKS-------------------------------SSFERLVKAAYESSIA-----------DDTPEGRS 348 (673)
T ss_pred CCCeEEEEEEeCCC-------------------------------ccHHHHHHHHHHhcCC-----------CCChHHHH
Confidence 98877776543210 1123345566677643 24899999
Q ss_pred HHHHHHHcCCCCCCCCcccchhhhhhhhcccccccccccccccccccceeEeecCCCCCceEEEEEecCCCcEEEEEcCC
Q 001568 453 LKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGS 532 (1051)
Q Consensus 453 l~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~~~~~~~~~KGa 532 (1051)
+++++++.|+... ......+||++++|+|++.++ ++ .+.||+
T Consensus 349 Iv~~a~~~~~~~~---------------------------------~~~~~~~pF~~~~k~~gv~~~---g~--~i~kGa 390 (673)
T PRK14010 349 IVKLAYKQHIDLP---------------------------------QEVGEYIPFTAETRMSGVKFT---TR--EVYKGA 390 (673)
T ss_pred HHHHHHHcCCCch---------------------------------hhhcceeccccccceeEEEEC---CE--EEEECC
Confidence 9999987665321 001124799999999998754 22 466999
Q ss_pred hhHHHhhccccccCCCceecCCHHHHHHHHHHHHHHhhccceEEEEEEeccccccccccccCcccccccCCCccccccCC
Q 001568 533 VESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIES 612 (1051)
Q Consensus 533 ~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~ 612 (1051)
++.++++|+. +|...+. .+.+..++++++|+|+++++.
T Consensus 391 ~~~il~~~~~----~g~~~~~------~~~~~~~~~a~~G~~~l~v~~-------------------------------- 428 (673)
T PRK14010 391 PNSMVKRVKE----AGGHIPV------DLDALVKGVSKKGGTPLVVLE-------------------------------- 428 (673)
T ss_pred HHHHHHHhhh----cCCCCch------HHHHHHHHHHhCCCeEEEEEE--------------------------------
Confidence 9999999974 2222221 245566788999999998652
Q ss_pred CeEEEEEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHH
Q 001568 613 DLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEA 692 (1051)
Q Consensus 613 ~l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 692 (1051)
|++++|+++++||+|+|++++|++||++||+++|+||||+.||.++|+++|+.
T Consensus 429 ~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~--------------------------- 481 (673)
T PRK14010 429 DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD--------------------------- 481 (673)
T ss_pred CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc---------------------------
Confidence 56899999999999999999999999999999999999999999999999994
Q ss_pred HHhcCCeEEEEeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHH
Q 001568 693 LSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSA 772 (1051)
Q Consensus 693 ~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~ 772 (1051)
.+|+|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||| +|+|+|+++||++++||||..++++
T Consensus 482 ------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~a 554 (673)
T PRK14010 482 ------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEV 554 (673)
T ss_pred ------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHH
Confidence 289999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001568 773 VAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAAL 807 (1051)
Q Consensus 773 i~~gR~~~~~i~~~~~~~~~~n~~~~~~~~~~~~~ 807 (1051)
+++||++|.|+++++.|.++.|+...+..+...|.
T Consensus 555 v~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~ 589 (673)
T PRK14010 555 VLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFM 589 (673)
T ss_pred HHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHH
Confidence 99999999999999999999999998888776554
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-86 Score=781.25 Aligned_cols=557 Identities=25% Similarity=0.333 Sum_probs=460.7
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHhhcCCC-CCCCCccccchhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCc-eeE
Q 001568 58 LEQFDDTLVKILLVAAFISFILAYFHSSD-SGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCE-SGK 135 (1051)
Q Consensus 58 ~~~f~~~~~~~ll~~~ils~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~-~~~ 135 (1051)
..||++|+.+++++++++++++++++... +....+..|...+++++.+++..+++.++|+|+++.+++|+++.++ +++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 35789999999999999999988654210 0112234555566666777777788889999999999999998886 799
Q ss_pred EEECCe-eceEeeCCCccCCcEEEeCCCCcccccEEEEEecCCceEEeccCCCCCCcccccCCCCCCCCcccccccccEE
Q 001568 136 VLRDGY-LVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMV 214 (1051)
Q Consensus 136 V~r~g~-~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~~l 214 (1051)
|+|||+ + ++|++++|+|||+|.|++||+|||||+|++ |.+.||||+|||||.|+.|+++.. .+.+
T Consensus 108 vir~g~~~-~~V~~~eL~~GDiV~v~~Gd~IPaDG~vie---G~a~VDESaLTGES~PV~K~~G~~----------~~~V 173 (679)
T PRK01122 108 KLREPGAA-EEVPATELRKGDIVLVEAGEIIPADGEVIE---GVASVDESAITGESAPVIRESGGD----------FSSV 173 (679)
T ss_pred EEECCCEE-EEEEHHHcCCCCEEEEcCCCEEEEEEEEEE---ccEEEEcccccCCCCceEeCCCCc----------cCeE
Confidence 999988 7 899999999999999999999999999995 678999999999999999987521 2349
Q ss_pred EeccEEEeceEEEEEEEeccchhhhHHHHHHhhccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccC
Q 001568 215 FAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVD 294 (1051)
Q Consensus 215 ~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1051)
|+||.+.+|+++++|+++|.+|.+|++.++++.+ +.+++|++..++.+...+..++++++++++.+... .
T Consensus 174 ~aGT~v~~G~~~i~Vta~g~~S~lgki~~lve~a--~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~--------~ 243 (679)
T PRK01122 174 TGGTRVLSDWIVIRITANPGESFLDRMIALVEGA--KRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY--------S 243 (679)
T ss_pred EeceEEEeeeEEEEEEEecccCHHHHHHHHHHhc--cccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH--------h
Confidence 9999999999999999999999999999999888 77899999988887766665444443333322111 0
Q ss_pred CCCcccccchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccC
Q 001568 295 GWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTN 374 (1051)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n 374 (1051)
++ ...+..++++++++|||+|+...+++...+++||+++|+++|+..++|+||++|+||||||||||+|
T Consensus 244 g~-----------~~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g 312 (679)
T PRK01122 244 GG-----------ALSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLG 312 (679)
T ss_pred Cc-----------hHHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCC
Confidence 11 1246677889999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEEecCCcccceeeEeecCcccCCCCCCccCCCCCCChHHHHHHHHHHhhhccCccccCCCcccccCCchHHHHH
Q 001568 375 QMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALK 454 (1051)
Q Consensus 375 ~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~ 454 (1051)
+|++.++++.+. .+ ...++.++++|+.. ..||...|++
T Consensus 313 ~~~v~~~~~~~~-----------------------------~~--~~~ll~~a~~~s~~-----------s~hP~~~AIv 350 (679)
T PRK01122 313 NRQASEFLPVPG-----------------------------VT--EEELADAAQLSSLA-----------DETPEGRSIV 350 (679)
T ss_pred cEEEEEEEeCCC-----------------------------CC--HHHHHHHHHHhcCC-----------CCCchHHHHH
Confidence 999998875321 00 12355566666643 2478899999
Q ss_pred HHHHH-cCCCCCCCCcccchhhhhhhhcccccccccccccccccccceeEeecCCCCCceEEEEEecCCCcEEEEEcCCh
Q 001568 455 VLVEK-MGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSV 533 (1051)
Q Consensus 455 ~~a~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~~~~~~~~~KGa~ 533 (1051)
+++++ .+.... ...+.....+||++.+++|++.++ | ..+.||++
T Consensus 351 ~~a~~~~~~~~~------------------------------~~~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~ 395 (679)
T PRK01122 351 VLAKQRFNLRER------------------------------DLQSLHATFVPFSAQTRMSGVDLD---G--REIRKGAV 395 (679)
T ss_pred HHHHhhcCCCch------------------------------hhccccceeEeecCcCceEEEEEC---C--EEEEECCH
Confidence 99876 332110 012345678899999988887653 2 57899999
Q ss_pred hHHHhhccccccCCCceecCCHHHHHHHHHHHHHHhhccceEEEEEEeccccccccccccCcccccccCCCccccccCCC
Q 001568 534 ESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESD 613 (1051)
Q Consensus 534 e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~ 613 (1051)
|.+++.|.. +|... .+++.+..++++++|+|++++|+ |
T Consensus 396 e~il~~~~~----~g~~~------~~~~~~~~~~~a~~G~~~l~va~--------------------------------~ 433 (679)
T PRK01122 396 DAIRRYVES----NGGHF------PAELDAAVDEVARKGGTPLVVAE--------------------------------D 433 (679)
T ss_pred HHHHHHHHh----cCCcC------hHHHHHHHHHHHhCCCcEEEEEE--------------------------------C
Confidence 999999963 22211 24566778899999999999984 4
Q ss_pred eEEEEEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHH
Q 001568 614 LVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEAL 693 (1051)
Q Consensus 614 l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~ 693 (1051)
++++|+++++|++|+|++++|++||++||+++|+||||+.||.++|+++|+.
T Consensus 434 ~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId---------------------------- 485 (679)
T PRK01122 434 NRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD---------------------------- 485 (679)
T ss_pred CeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc----------------------------
Confidence 5799999999999999999999999999999999999999999999999994
Q ss_pred HhcCCeEEEEeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHH
Q 001568 694 SKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAV 773 (1051)
Q Consensus 694 ~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i 773 (1051)
.++||++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||| +|+++|+++||++++||||..+++++
T Consensus 486 -----~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av 559 (679)
T PRK01122 486 -----DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVV 559 (679)
T ss_pred -----EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence 289999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 001568 774 AEGRSIYNNMKAFIRYMISSNVGEVISIF 802 (1051)
Q Consensus 774 ~~gR~~~~~i~~~~~~~~~~n~~~~~~~~ 802 (1051)
++||+..-.-.....|++...++-.+.++
T Consensus 560 ~~GR~~~~tr~~~~~f~~~n~~~~~~~i~ 588 (679)
T PRK01122 560 EIGKQLLMTRGALTTFSIANDVAKYFAII 588 (679)
T ss_pred HHHHHHHhhhHhhhhhhHHHHHHHHHHHH
Confidence 99999997777788898886665544433
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-82 Score=745.44 Aligned_cols=562 Identities=25% Similarity=0.353 Sum_probs=458.4
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccch---hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCc-e
Q 001568 58 LEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVE---PLVIVLILVLNAIVGVWQESNAEKALEALKKIQCE-S 133 (1051)
Q Consensus 58 ~~~f~~~~~~~ll~~~ils~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~-~ 133 (1051)
..||+++..+++++++++++++++++...+....-..|++ .+++++.+++..+++.++|+|+++.+++|++..++ .
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 3578999999999999999998765321111001012444 34455556777788889999999999999998876 4
Q ss_pred eEEEE-CCeeceEeeCCCccCCcEEEeCCCCcccccEEEEEecCCceEEeccCCCCCCcccccCCCCCCCCccccccccc
Q 001568 134 GKVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKEN 212 (1051)
Q Consensus 134 ~~V~r-~g~~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~ 212 (1051)
++|+| ||++ ++|++++|+|||+|.|++||+|||||++++ |.+.||||+|||||.|+.|+++.. .+
T Consensus 107 a~vlr~dg~~-~~V~~~~L~~GDiV~V~~Gd~IPaDG~vie---G~~~VDESaLTGES~PV~K~~g~~----------~~ 172 (675)
T TIGR01497 107 AKLLRDDGAI-DKVPADQLKKGDIVLVEAGDVIPCDGEVIE---GVASVDESAITGESAPVIKESGGD----------FA 172 (675)
T ss_pred EEEEeeCCEE-EEEEHHHCCCCCEEEECCCCEEeeeEEEEE---ccEEEEcccccCCCCceeecCCCC----------cc
Confidence 88886 8998 899999999999999999999999999995 689999999999999999988621 12
Q ss_pred EEEeccEEEeceEEEEEEEeccchhhhHHHHHHhhccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Q 001568 213 MVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDV 292 (1051)
Q Consensus 213 ~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (1051)
.+|+||.+.+|++.++|+++|.+|.+|++.++++.+ +.+++|+|..++.+...+..+++++++.+|.+.. +
T Consensus 173 ~V~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a--~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~~--~----- 243 (675)
T TIGR01497 173 SVTGGTRILSDWLVVECTANPGETFLDRMIALVEGA--QRRKTPNEIALTILLIALTLVFLLVTATLWPFAA--Y----- 243 (675)
T ss_pred eeecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhc--ccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH--h-----
Confidence 499999999999999999999999999999999887 7788999988888776655444433333322110 0
Q ss_pred cCCCCcccccchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccc
Q 001568 293 VDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLT 372 (1051)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT 372 (1051)
.+. ...+..++++++++|||+|+...+.+...+++||+++|+++|+..++|+||++|+||||||||||
T Consensus 244 -~~~-----------~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT 311 (675)
T TIGR01497 244 -GGN-----------AISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTIT 311 (675)
T ss_pred -cCh-----------hHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCccc
Confidence 110 12355668899999999988777777778999999999999999999999999999999999999
Q ss_pred cCCeEEEEEEecCCcccceeeEeecCcccCCCCCCccCCCCCCChHHHHHHHHHHhhhccCccccCCCcccccCCchHHH
Q 001568 373 TNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAA 452 (1051)
Q Consensus 373 ~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~a 452 (1051)
+|+|++.+++..+. . ...+++..+++|+.. ..||.+.|
T Consensus 312 ~g~~~v~~~~~~~~-----------------------------~--~~~~ll~~aa~~~~~-----------s~hP~a~A 349 (675)
T TIGR01497 312 LGNRLASEFIPAQG-----------------------------V--DEKTLADAAQLASLA-----------DDTPEGKS 349 (675)
T ss_pred CCCeEEEEEEecCC-----------------------------C--cHHHHHHHHHHhcCC-----------CCCcHHHH
Confidence 99999999875321 0 113445566666533 25799999
Q ss_pred HHHHHHHcCCCCCCCCcccchhhhhhhhcccccccccccccccccccceeEeecCCCCCceEEEEEecCCCcEEEEEcCC
Q 001568 453 LKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGS 532 (1051)
Q Consensus 453 l~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~~~~~~~~~KGa 532 (1051)
+++++++.|..... ..+......||++.+++|++.+. +| ..+.||+
T Consensus 350 iv~~a~~~~~~~~~------------------------------~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa 395 (675)
T TIGR01497 350 IVILAKQLGIREDD------------------------------VQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGA 395 (675)
T ss_pred HHHHHHHcCCCccc------------------------------cccccceEEEEcCCCcEEEEEEe--CC--eEEEECC
Confidence 99999876653210 11234567899999887776543 22 5789999
Q ss_pred hhHHHhhccccccCCCceecCCHHHHHHHHHHHHHHhhccceEEEEEEeccccccccccccCcccccccCCCccccccCC
Q 001568 533 VESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIES 612 (1051)
Q Consensus 533 ~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~ 612 (1051)
+|.+++.|.. +|... .+.+.+.+++++++|+|++++|+
T Consensus 396 ~e~i~~~~~~----~g~~~------~~~~~~~~~~~a~~G~r~l~va~-------------------------------- 433 (675)
T TIGR01497 396 VDAIKRHVEA----NGGHI------PTDLDQAVDQVARQGGTPLVVCE-------------------------------- 433 (675)
T ss_pred HHHHHHHHHh----cCCCC------cHHHHHHHHHHHhCCCeEEEEEE--------------------------------
Confidence 9999998852 22211 13466778899999999999995
Q ss_pred CeEEEEEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHH
Q 001568 613 DLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEA 692 (1051)
Q Consensus 613 ~l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 692 (1051)
|.+++|+++++|++|+|++++|++|+++|++++|+|||+..+|.++|+++|+.
T Consensus 434 ~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~--------------------------- 486 (675)
T TIGR01497 434 DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD--------------------------- 486 (675)
T ss_pred CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC---------------------------
Confidence 24789999999999999999999999999999999999999999999999994
Q ss_pred HHhcCCeEEEEeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHH
Q 001568 693 LSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSA 772 (1051)
Q Consensus 693 ~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~ 772 (1051)
.+++|++|++|.++|+.+|++|+.|+|+|||.||+|||++|||||||| +|++.++++||++++|+||..++++
T Consensus 487 ------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~a 559 (675)
T TIGR01497 487 ------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEV 559 (675)
T ss_pred ------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHH
Confidence 378999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001568 773 VAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAA 806 (1051)
Q Consensus 773 i~~gR~~~~~i~~~~~~~~~~n~~~~~~~~~~~~ 806 (1051)
+++||+++-+......|++..+++..+..+-..|
T Consensus 560 v~~GR~~~~t~~~~~t~~~~~~~~~~~~~~~~~~ 593 (675)
T TIGR01497 560 VHIGKQLLITRGALTTFSIANDVAKYFAIIPAIF 593 (675)
T ss_pred HHHHHHHHHHHHHHheeeecccHHHHHHHHHHHH
Confidence 9999999999999999999988887665554443
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-83 Score=696.34 Aligned_cols=670 Identities=29% Similarity=0.435 Sum_probs=520.4
Q ss_pred ccCCHHHHHHHcCCCCCCCCCHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhcCCCCC
Q 001568 9 WSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSG 88 (1051)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~ils~~~~~~~~~~~~ 88 (1051)
-..+.|++.+.|.+..+ ||+++|+++|+++||.|++..+|-+ .+..|+.-|.+|+.+..-.++++...+. .+
T Consensus 19 ~~~p~eeVfeeL~~t~~-GLt~~E~~eRlk~fG~NkleEkken-~~lKFl~Fm~~PlswVMEaAAimA~~La--ng---- 90 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCTRE-GLTSDEVEERLKIFGPNKLEEKKES-KFLKFLGFMWNPLSWVMEAAAIMAIGLA--NG---- 90 (942)
T ss_pred ccCchhhhHHHHhcCCC-CCchHHHHHHHHhhCchhhhhhhhh-HHHHHHHHHhchHHHHHHHHHHHHHHHh--cC----
Confidence 35689999999998754 9999999999999999999976654 4444556677899999999998776654 21
Q ss_pred CCCccccchhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCceeEEEECCeeceEeeCCCccCCcEEEeCCCCccccc
Q 001568 89 DSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPAD 168 (1051)
Q Consensus 89 ~~~~~~~~~~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~~I~~~~Lv~GDII~l~~G~~vPaD 168 (1051)
.+....|.+...|...+++|..+++.+|+++-+..+.|++-...++.|+|||+| .++++++||||||+.++.|++||||
T Consensus 91 ~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw-~E~eAs~lVPGDIlsik~GdIiPaD 169 (942)
T KOG0205|consen 91 GGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKW-SEQEASILVPGDILSIKLGDIIPAD 169 (942)
T ss_pred CCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCee-eeeeccccccCceeeeccCCEecCc
Confidence 122336777778888889999999999999999999999888899999999999 9999999999999999999999999
Q ss_pred EEEEEecCCceEEeccCCCCCCcccccCCCCCCCCcccccccccEEEeccEEEeceEEEEEEEeccchhhhHHHHHHhhc
Q 001568 169 MRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDA 248 (1051)
Q Consensus 169 ~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 248 (1051)
+|+++ .+-+.||+|.|||||.|+.|+++ +.+|+||+|.+|++.++|++||.+|..|+-++++..
T Consensus 170 aRLl~--gD~LkiDQSAlTGESLpvtKh~g-------------d~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds- 233 (942)
T KOG0205|consen 170 ARLLE--GDPLKIDQSALTGESLPVTKHPG-------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS- 233 (942)
T ss_pred cceec--CCccccchhhhcCCccccccCCC-------------CceecccccccceEEEEEEEeccceeehhhHHhhcC-
Confidence 99997 56899999999999999999986 679999999999999999999999999999988765
Q ss_pred cccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhHHHHHHHHHHHHHHhcCCchHH
Q 001568 249 SLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPA 328 (1051)
Q Consensus 249 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~ 328 (1051)
......+++-++.+.+++...+++-.++.+++.+. ... .. ++.. .-....+++-.+|.++|.
T Consensus 234 --t~~~GHFqkVLt~IGn~ci~si~~g~lie~~vmy~--~q~---R~--------~r~~---i~nLlvllIGgiPiamPt 295 (942)
T KOG0205|consen 234 --TNQVGHFQKVLTGIGNFCICSIALGMLIEITVMYP--IQH---RL--------YRDG---IDNLLVLLIGGIPIAMPT 295 (942)
T ss_pred --CCCcccHHHHHHhhhhHHHHHHHHHHHHHHHhhhh--hhh---hh--------hhhh---hhheheeeecccccccce
Confidence 45567889999888877654332222222222111 110 00 1111 111123344459999999
Q ss_pred HHHHHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCcccceeeEeecCcccCCCCCCc
Q 001568 329 VITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGI 408 (1051)
Q Consensus 329 ~~~~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (1051)
.++..++.++.||+++|.++++.+++|+|+.+|++|+|||||||.|+++|.+=.+ .+.+++
T Consensus 296 VlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~---------ev~v~g---------- 356 (942)
T KOG0205|consen 296 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLI---------EVFVKG---------- 356 (942)
T ss_pred eeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcc---------eeeecC----------
Confidence 9999999999999999999999999999999999999999999999999976110 011111
Q ss_pred cCCCCCCChHHHHHHHHHHhhhccCccccCCCcccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhhhcccccccc
Q 001568 409 VDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVR 488 (1051)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (1051)
.++...-+..|.+ + ..+ ..|..|.|++....+ |
T Consensus 357 -------v~~D~~~L~A~rA--s--r~e--------n~DAID~A~v~~L~d------------------------P---- 389 (942)
T KOG0205|consen 357 -------VDKDDVLLTAARA--S--RKE--------NQDAIDAAIVGMLAD------------------------P---- 389 (942)
T ss_pred -------CChHHHHHHHHHH--h--hhc--------ChhhHHHHHHHhhcC------------------------H----
Confidence 1111111122211 1 111 235677887765431 1
Q ss_pred cccccccccccceeEeecCCCCCceEEEEEecCCCcEEEEEcCChhHHHhhccccccCCCceecCCHHHHHHHHHHHHHH
Q 001568 489 LGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEM 568 (1051)
Q Consensus 489 ~~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~~~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 568 (1051)
+....+|+.++..||++..||.+..+.+++|+....+|||||.|++.|+. +.+.++...+.+++|
T Consensus 390 ----Keara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~-----------~~~i~~~vh~~id~~ 454 (942)
T KOG0205|consen 390 ----KEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNE-----------DHDIPERVHSIIDKF 454 (942)
T ss_pred ----HHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhc-----------cCcchHHHHHHHHHH
Confidence 11245788999999999999999999999999999999999999999973 344567888999999
Q ss_pred hhccceEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChhHHHHHHHHHhCCcEEEEEc
Q 001568 569 SSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVIT 648 (1051)
Q Consensus 569 a~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~T 648 (1051)
+++|+|-+++|++..++...+ .-.....|+|+.-+-||+|.+..++|+.....|.+|.|+|
T Consensus 455 AeRGlRSLgVArq~v~e~~~~-------------------~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~Vkmit 515 (942)
T KOG0205|consen 455 AERGLRSLAVARQEVPEKTKE-------------------SPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMIT 515 (942)
T ss_pred HHhcchhhhhhhhcccccccc-------------------CCCCCcccccccccCCCCccchHHHHHHHHhccceeeeec
Confidence 999999999999876532110 0124567999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCccccccCchHH-hcCCHHHHHHHHHhcCCeEEEEeCchhHHHHHHHHhhcCCEEEEEc
Q 001568 649 GDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEF-MALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTG 727 (1051)
Q Consensus 649 Gd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~-~~l~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iG 727 (1051)
||...-++..++++|+-.+-.. +..+-|.+- +.+...+..+.+. +..=||.+.|+||.++|+.||++|+.|+|+|
T Consensus 516 gdqlaI~keTgrrlgmgtnmyp--ss~llG~~~~~~~~~~~v~elie--~adgfAgVfpehKy~iV~~Lq~r~hi~gmtg 591 (942)
T KOG0205|consen 516 GDQLAIAKETGRRLGMGTNMYP--SSALLGLGKDGSMPGSPVDELIE--KADGFAGVFPEHKYEIVKILQERKHIVGMTG 591 (942)
T ss_pred chHHHHHHhhhhhhccccCcCC--chhhccCCCCCCCCCCcHHHHhh--hccCccccCHHHHHHHHHHHhhcCceecccC
Confidence 9999999999999998653211 011111110 1111223344444 4567999999999999999999999999999
Q ss_pred CCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001568 728 DGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAAL 807 (1051)
Q Consensus 728 Dg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~n~~~~~~~~~~~~~ 807 (1051)
||.||+|+|+.||+|||+. .+++.|+.++|+++..+.++.+..++..+|.+|+|++.+..|.++..+-.++.+.+. .+
T Consensus 592 dgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv~gfml~-al 669 (942)
T KOG0205|consen 592 DGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI-AL 669 (942)
T ss_pred CCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHHHHH-HH
Confidence 9999999999999999998 999999999999999999999999999999999999999999988777654322222 11
Q ss_pred cCCCchhHHHHHHHHHHHhh
Q 001568 808 GIPECLIPVQLLWVNLVTDG 827 (1051)
Q Consensus 808 ~~~~~~~~~~~l~~n~~~~~ 827 (1051)
-+...|+|..++++-++-|.
T Consensus 670 Iw~~df~pfmvliiailnd~ 689 (942)
T KOG0205|consen 670 IWEFDFSPFMVLIIAILNDG 689 (942)
T ss_pred HHHhcCCHHHHHHHHHhcCC
Confidence 12345666666666655554
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-81 Score=699.76 Aligned_cols=861 Identities=21% Similarity=0.250 Sum_probs=575.0
Q ss_pred ccCCHHHHHHHcCCCCCCCCC-HHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhcCCCC
Q 001568 9 WSWTVEQCLKEYNVKLDKGLS-SREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDS 87 (1051)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~GLs-~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~ils~~~~~~~~~~~ 87 (1051)
-..++++.+..++.+ +|+. ..++..-.++||+|+.+.+.| .|-++|.|.-..|+. +..+++..+|..+.
T Consensus 146 ~~fp~~~~~g~~~k~--~G~~~~~~i~~a~~~~G~N~fdi~vP-tF~eLFkE~A~aPfF----VFQVFcvgLWCLDe--- 215 (1160)
T KOG0209|consen 146 LTFPTDEPFGYFQKS--TGHEEESEIKLAKHKYGKNKFDIVVP-TFSELFKEHAVAPFF----VFQVFCVGLWCLDE--- 215 (1160)
T ss_pred cccCcCCcchhhhhc--cCcchHHHHHHHHHHhcCCccccCCc-cHHHHHHHhccCcee----eHhHHhHHHHHhHH---
Confidence 345566666666655 4665 455666667799999998776 477777666665554 44555555655543
Q ss_pred CCCCccccchhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhh--cCceeEEEECCeeceEeeCCCccCCcEEEeCC---C
Q 001568 88 GDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKI--QCESGKVLRDGYLVPDLPAIGLVPGDIVELGV---G 162 (1051)
Q Consensus 88 ~~~~~~~~~~~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~--~~~~~~V~r~g~~~~~I~~~~Lv~GDII~l~~---G 162 (1051)
.|+.+++.+++++.-+.--.+|+.++ +..++++ .+..+.|+|+++| +.+.++||.|||+|.+.. .
T Consensus 216 ------yWYySlFtLfMli~fE~tlV~Qrm~~---lse~R~Mg~kpy~I~v~R~kKW-~~l~seeLlPgDvVSI~r~~ed 285 (1160)
T KOG0209|consen 216 ------YWYYSLFTLFMLIAFEATLVKQRMRT---LSEFRTMGNKPYTINVYRNKKW-VKLMSEELLPGDVVSIGRGAED 285 (1160)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhcCCCceEEEEEecCcc-eeccccccCCCceEEeccCccc
Confidence 56666666666655444444555444 4455544 4668999999999 999999999999999987 4
Q ss_pred CcccccEEEEEecCCceEEeccCCCCCCcccccCCCCCCCCc----ccccccccEEEeccEEEe-------------ceE
Q 001568 163 DKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDD----CELQAKENMVFAGTTVVN-------------GSC 225 (1051)
Q Consensus 163 ~~vPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~----~~~~~~~~~l~aGt~v~~-------------g~~ 225 (1051)
..||||.+++ .|+|.|||+||||||.|..|.+...-+.+ .+..++.+++|+||.+++ |.+
T Consensus 286 ~~vPCDllLL---~GsciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc 362 (1160)
T KOG0209|consen 286 SHVPCDLLLL---RGSCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGC 362 (1160)
T ss_pred CcCCceEEEE---ecceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCe
Confidence 6899999999 59999999999999999999875443322 233457789999999984 679
Q ss_pred EEEEEEeccchhhhHHHHHHhhccccCCCChhHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhcccccccCCCCcccccch
Q 001568 226 VCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRL-TTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSF 304 (1051)
Q Consensus 226 ~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (1051)
.++|++||.+|..|++.|.+... .++-|. |....++ ++++++++++.. ++.+.-... .+ .
T Consensus 363 ~a~VlrTGFeTSQGkLvRtilf~--aervTa-----Nn~Etf~FILFLlVFAiaAa--~Yvwv~Gsk--d~--------~ 423 (1160)
T KOG0209|consen 363 VAYVLRTGFETSQGKLVRTILFS--AERVTA-----NNRETFIFILFLLVFAIAAA--GYVWVEGSK--DP--------T 423 (1160)
T ss_pred EEEEEeccccccCCceeeeEEec--ceeeee-----ccHHHHHHHHHHHHHHHHhh--heEEEeccc--Cc--------c
Confidence 99999999999999999988765 222222 1122222 222222222211 111110000 11 1
Q ss_pred hhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEec
Q 001568 305 EKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTL 384 (1051)
Q Consensus 305 ~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~ 384 (1051)
+.-...|.-++.+++..+|+-||+-++++...+...++|.+++|..+-.+.-.|+||+.|||||||||+..|.|.++...
T Consensus 424 RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~ 503 (1160)
T KOG0209|consen 424 RSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGL 503 (1160)
T ss_pred hhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccc
Confidence 11123455667788899999999999999999999999999999999999999999999999999999999999998754
Q ss_pred CCcccceeeEeecCcccCCCCCCccCCCCCCChHHHHHHHHHHhhhccCccccCCCcccccCCchHHHHHHHHHHcCCCC
Q 001568 385 GRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPD 464 (1051)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~ 464 (1051)
..... ...|.. ...++ -..+++.||+.....+ + ..|||.|.|.++. .||..
T Consensus 504 ~~~~~----------~~~~~s--------~~p~~----t~~vlAscHsLv~le~-~---lVGDPlEKA~l~~---v~W~~ 554 (1160)
T KOG0209|consen 504 SADEG----------ALTPAS--------KAPNE----TVLVLASCHSLVLLED-K---LVGDPLEKATLEA---VGWNL 554 (1160)
T ss_pred cCCcc----------cccchh--------hCCch----HHHHHHHHHHHHHhcC-c---ccCChHHHHHHHh---cCccc
Confidence 32110 000000 01122 2445667775433222 2 6899999998854 46655
Q ss_pred CCCCcccchhhhhhhhcccccccccccccccccccceeEeecCCCCCceEEEEEecCC----CcEEEEEcCChhHHHhhc
Q 001568 465 VKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPT----GHNQLLVKGSVESLLERS 540 (1051)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~~----~~~~~~~KGa~e~i~~~c 540 (1051)
.+.+.... . +....+.++++++.|+|..|||||+++... -++++.+|||||.|.++.
T Consensus 555 ~k~~~v~p------------~-------~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml 615 (1160)
T KOG0209|consen 555 EKKNSVCP------------R-------EGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEML 615 (1160)
T ss_pred ccCcccCC------------C-------cCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHH
Confidence 43221100 0 111235678999999999999999997532 368888999999999987
Q ss_pred cccccCCCceecCCHHHHHHHHHHHHHHhhccceEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEe
Q 001568 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVV 620 (1051)
Q Consensus 541 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i 620 (1051)
...+ ..+.+.+.+|+++|.||+|++||++..- ......+..++++|+||+|.|++
T Consensus 616 ~dvP--------------~dY~~iYk~ytR~GsRVLALg~K~l~~~-----------~~~q~rd~~Re~vEsdLtFaGFl 670 (1160)
T KOG0209|consen 616 RDVP--------------KDYDEIYKRYTRQGSRVLALGYKPLGDM-----------MVSQVRDLKREDVESDLTFAGFL 670 (1160)
T ss_pred HhCc--------------hhHHHHHHHHhhccceEEEEeccccccc-----------chhhhhhhhhhhhhhcceeeeeE
Confidence 6432 4577889999999999999999988511 00112245678899999999999
Q ss_pred cccCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCC------------C-----c------------
Q 001568 621 GLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNE------------D-----L------------ 671 (1051)
Q Consensus 621 ~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~------------~-----~------------ 671 (1051)
.|..|+|+|++++|+.|++++++++|+||||+.||.++|+++||..... + .
T Consensus 671 if~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~ 750 (1160)
T KOG0209|consen 671 IFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGK 750 (1160)
T ss_pred EEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCc
Confidence 9999999999999999999999999999999999999999999975411 0 0
Q ss_pred --------cccccCchHHhcCCHHH-HHHHHHhcCCeEEEEeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee
Q 001568 672 --------TGRSFTGKEFMALSSTQ-QIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (1051)
Q Consensus 672 --------~~~~~~g~~~~~l~~~~-~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advg 742 (1051)
.+.+++|+.++.+...+ +.+++. ++.||||+.|.||..++..+++.|+.++|||||+||+.|||+||||
T Consensus 751 ~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~--hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVG 828 (1160)
T KOG0209|consen 751 KKTLLAETHDLCITGSALDHLQATDQLRRLIP--HVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVG 828 (1160)
T ss_pred cchhhhhhhhhhcchhHHHHHhhhHHHHHhhh--heeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccc
Confidence 13467888888876654 455666 7899999999999999999999999999999999999999999999
Q ss_pred EEeCCCccHH----------------------------------------------------------------------
Q 001568 743 VAMGITGTEV---------------------------------------------------------------------- 752 (1051)
Q Consensus 743 ia~g~~~~~~---------------------------------------------------------------------- 752 (1051)
||+- ++.+.
T Consensus 829 VALL-~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLG 907 (1160)
T KOG0209|consen 829 VALL-NNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLG 907 (1160)
T ss_pred eehh-cCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCcccccc
Confidence 9984 22210
Q ss_pred -HHhccCeeecCCCchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhhh
Q 001568 753 -AKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPAT 831 (1051)
Q Consensus 753 -a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~l 831 (1051)
|.-||.+.-.-.+.+++.+.|++||+...+.-+++.......++....+-...+-|. -|+..|...--+++. ..-+
T Consensus 908 DASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQMfKILALN~LisAYslSvlyldGV--KfgD~QaTisGlLla-~cFl 984 (1160)
T KOG0209|consen 908 DASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQMFKILALNCLISAYSLSVLYLDGV--KFGDTQATISGLLLA-ACFL 984 (1160)
T ss_pred ccccccccccccchHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc--eecchhHhHHHHHHH-HHHh
Confidence 111233443444688999999999999999999988876655544443333333343 355566544433332 1122
Q ss_pred hccCCCCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCcccccccccccCcc
Q 001568 832 ALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQLRNWGEC 911 (1051)
Q Consensus 832 ~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1051)
+++-.+|-+.+.+..|.. +++|.-.+.+++.+ +++-+..+++.... .-.. . +. .|
T Consensus 985 fISrskPLetLSkeRP~~---nIFN~Y~i~svl~Q-----FaVH~~tLvYi~~~-a~~~--~-p~-------------~~ 1039 (1160)
T KOG0209|consen 985 FISRSKPLETLSKERPLP---NIFNVYIILSVLLQ-----FAVHIATLVYITGE-AYKL--E-PP-------------EE 1039 (1160)
T ss_pred heecCCchhhHhhcCCCC---CcchHHHHHHHHHH-----HHHHHHHhhhhHHH-HHhc--C-Cc-------------cc
Confidence 344455656676666654 46665444433332 22222222222111 0000 0 00 00
Q ss_pred CCCCCccccccccCCCcccccCCCCccccccccchhHHHHHHHHHHHHHH-hhhccccCCCccccCCCCChHHHHHHHHH
Q 001568 912 STWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMFN-SLNALSEDNSLVTMPPWRNPWLLVAMSVS 990 (1051)
Q Consensus 912 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~t~~f~~lv~~q~~~-~~~~~~~~~s~~~~~~~~N~~~~~~i~~~ 990 (1051)
. . +.. .-|...+ ..+++++.. ...|+.. ++|. ...+|+.++..|+.++.+++++
T Consensus 1040 ~------v-------------dl~-~~F~Psl-lNt~vyiis-l~~QvsTFAVNY---~G~PF~Esl~eNK~l~y~ll~~ 1094 (1160)
T KOG0209|consen 1040 K------V-------------DLE-EKFSPSL-LNTTVYIIS-LAQQVSTFAVNY---QGRPFRESLRENKGLLYGLLGS 1094 (1160)
T ss_pred c------c-------------Chh-cccChhh-hhhHHHHHH-HHHHHHHhhhhc---cCcchhhhhhhccchHHHHHHH
Confidence 0 0 000 0111111 123333322 2333322 2232 3456888889999999998887
Q ss_pred HHHHHHHH--hccccccccccccCChhhHHHHHHH----HHHHHHHHHHHHHHhhc
Q 001568 991 LGLHCLIL--YVPFLADVFGVVPLNLNEWFLVILV----SAPVILIDEVLKFVGRN 1040 (1051)
Q Consensus 991 ~~l~~~i~--~vp~~~~~f~~~~l~~~~w~~~l~~----~~~~l~i~e~~K~~~R~ 1040 (1051)
.++.+... .-|-++..|...+++-..=...+++ -+++++++.+.|++-+.
T Consensus 1095 ~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~f~~ 1150 (1160)
T KOG0209|consen 1095 AGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFFFGD 1150 (1160)
T ss_pred HHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 76655443 3577888899988874332222222 35566777777776553
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-75 Score=687.74 Aligned_cols=509 Identities=29% Similarity=0.426 Sum_probs=428.5
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCceeEEEE-CCeeceEeeCCCccCCcEEEeCCCCcccccEEEE
Q 001568 94 DYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVA 172 (1051)
Q Consensus 94 ~~~~~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r-~g~~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll 172 (1051)
+|.+++++++++.+..+++.+...|++++++.|.++.|+++++++ ||++ ++||.++|+|||+|.|+|||+||+||+|+
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~-~~v~v~~v~~GD~v~VrpGE~IPvDG~V~ 251 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEE-EEVPVEEVQVGDIVLVRPGERIPVDGVVV 251 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcE-EEEEHHHCCCCCEEEECCCCEecCCeEEE
Confidence 345677778888888889999999999999999999999998777 5655 89999999999999999999999999999
Q ss_pred EecCCceEEeccCCCCCCcccccCCCCCCCCcccccccccEEEeccEEEeceEEEEEEEeccchhhhHHHHHHhhccccC
Q 001568 173 ALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEE 252 (1051)
Q Consensus 173 ~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 252 (1051)
+|...||||+|||||.|+.|.++ +.+++||.+.+|.....|+++|.+|.+++|.++++++ +.
T Consensus 252 ---~G~s~vDeS~iTGEs~PV~k~~G-------------d~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~A--q~ 313 (713)
T COG2217 252 ---SGSSSVDESMLTGESLPVEKKPG-------------DEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEA--QS 313 (713)
T ss_pred ---eCcEEeecchhhCCCCCEecCCC-------------CEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHH--hh
Confidence 48889999999999999999986 7899999999999999999999999999999999999 89
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhHHHHHHHHHHHHHHhcCCchHHHHHH
Q 001568 253 SDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITT 332 (1051)
Q Consensus 253 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~ 332 (1051)
+|+|.|+..|+++.++++.+++++++.+++|+.... .+| ...+..++++++++|||+|.++.|+
T Consensus 314 ~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~-----~~~-----------~~a~~~a~avLVIaCPCALgLAtP~ 377 (713)
T COG2217 314 SKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGG-----GDW-----------ETALYRALAVLVIACPCALGLATPT 377 (713)
T ss_pred CCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcC-----CcH-----------HHHHHHHHhheeeeCccHHHhHHHH
Confidence 999999999999999999888888887776654321 112 3457889999999999999999999
Q ss_pred HHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCcccceeeEeecCcccCCCCCCccCCC
Q 001568 333 CLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWP 412 (1051)
Q Consensus 333 ~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (1051)
++..+..+.+++|+++|+..++|.++++|+|+||||||||+|+|+|.++...+.
T Consensus 378 ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~-------------------------- 431 (713)
T COG2217 378 AILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG-------------------------- 431 (713)
T ss_pred HHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--------------------------
Confidence 999999999999999999999999999999999999999999999999886531
Q ss_pred CCCChHHHHHHHHHHhhhccCccccCCCcccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhhhcccccccccccc
Q 001568 413 CYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCC 492 (1051)
Q Consensus 413 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (1051)
.+..+..++. ++- ..+.||...|++++++..|.....
T Consensus 432 ---~e~~~L~laA--alE------------~~S~HPiA~AIv~~a~~~~~~~~~-------------------------- 468 (713)
T COG2217 432 ---DEDELLALAA--ALE------------QHSEHPLAKAIVKAAAERGLPDVE-------------------------- 468 (713)
T ss_pred ---CHHHHHHHHH--HHH------------hcCCChHHHHHHHHHHhcCCCCcc--------------------------
Confidence 1122222222 221 235799999999999877632110
Q ss_pred cccccccceeEeecCCCCCceEEEEEecCCCcEEEEEcCChhHHHhhccccccCCCceecCCHHHHHHHHHHHHHHhhcc
Q 001568 493 EWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKG 572 (1051)
Q Consensus 493 ~~~~~~~~~l~~~~F~s~rk~msviv~~~~~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G 572 (1051)
....+| .+-....+ +| ..+.-|++..+.+.-.. .+. ..+..+.+..+|
T Consensus 469 --------~~~~i~----G~Gv~~~v---~g--~~v~vG~~~~~~~~~~~----------~~~-----~~~~~~~~~~~G 516 (713)
T COG2217 469 --------DFEEIP----GRGVEAEV---DG--ERVLVGNARLLGEEGID----------LPL-----LSERIEALESEG 516 (713)
T ss_pred --------ceeeec----cCcEEEEE---CC--EEEEEcCHHHHhhcCCC----------ccc-----hhhhHHHHHhcC
Confidence 011111 11111111 22 45566887766542110 110 234566778889
Q ss_pred ceEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCH
Q 001568 573 LRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNK 652 (1051)
Q Consensus 573 ~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~ 652 (1051)
..++.++. |.+++|+++++|++|++++++|+.||+.|++++|+||||+
T Consensus 517 ~t~v~va~--------------------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~ 564 (713)
T COG2217 517 KTVVFVAV--------------------------------DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNR 564 (713)
T ss_pred CeEEEEEE--------------------------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCH
Confidence 88777764 4478999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCchhHHHHHHHHhhcCCEEEEEcCCccC
Q 001568 653 STAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVND 732 (1051)
Q Consensus 653 ~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND 732 (1051)
.+|.++|+++||.. +++.+.|++|.++|+.+|++|++|+|+|||.||
T Consensus 565 ~~A~~iA~~lGId~---------------------------------v~AellPedK~~~V~~l~~~g~~VamVGDGIND 611 (713)
T COG2217 565 RTAEAIAKELGIDE---------------------------------VRAELLPEDKAEIVRELQAEGRKVAMVGDGIND 611 (713)
T ss_pred HHHHHHHHHcChHh---------------------------------heccCCcHHHHHHHHHHHhcCCEEEEEeCCchh
Confidence 99999999999942 789999999999999999999999999999999
Q ss_pred HHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 001568 733 APALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLT 804 (1051)
Q Consensus 733 ~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~n~~~~~~~~~~ 804 (1051)
+|||++|||||||| +|+|+|+++||++++++++..++.+++.+|+++.+|++++.|.|.+|.+.+.+..+.
T Consensus 612 APALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 612 APALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred HHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999 799999999999999999999999999999999999999999999999876655544
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-72 Score=685.72 Aligned_cols=502 Identities=25% Similarity=0.389 Sum_probs=424.9
Q ss_pred cchhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCceeEEEECCeeceEeeCCCccCCcEEEeCCCCcccccEEEEEe
Q 001568 95 YVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAAL 174 (1051)
Q Consensus 95 ~~~~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~~ 174 (1051)
|.+++.+++++.++.+++.+++.|+++.+++|.++.|.+++|+|||++ ++|++++|+|||+|.|++||+|||||+|++
T Consensus 206 ~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~-~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~- 283 (741)
T PRK11033 206 TAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGER-EEVAIADLRPGDVIEVAAGGRLPADGKLLS- 283 (741)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEE-EEEEHHHCCCCCEEEECCCCEEecceEEEE-
Confidence 456777888888999999999999999999999999999999999999 999999999999999999999999999995
Q ss_pred cCCceEEeccCCCCCCcccccCCCCCCCCcccccccccEEEeccEEEeceEEEEEEEeccchhhhHHHHHHhhccccCCC
Q 001568 175 KTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESD 254 (1051)
Q Consensus 175 ~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~ 254 (1051)
|.+.||||+|||||.|+.|.++ +.+|+||.+.+|.++++|+++|.+|.+|+|.++++++ +.++
T Consensus 284 --g~~~vdes~lTGEs~Pv~k~~G-------------d~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a--~~~k 346 (741)
T PRK11033 284 --PFASFDESALTGESIPVERATG-------------EKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEA--EERR 346 (741)
T ss_pred --CcEEeecccccCCCCCEecCCC-------------CeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHh--hccC
Confidence 7789999999999999999875 7899999999999999999999999999999999988 7889
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 001568 255 TPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCL 334 (1051)
Q Consensus 255 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~ 334 (1051)
+|+|+.+++++.+++++++++++++++++...+. .+| ...+..++++++++|||+|.++.|+++
T Consensus 347 ~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~-----~~~-----------~~~i~~a~svlviacPcaL~latP~a~ 410 (741)
T PRK11033 347 APIERFIDRFSRIYTPAIMLVALLVILVPPLLFA-----APW-----------QEWIYRGLTLLLIGCPCALVISTPAAI 410 (741)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----CCH-----------HHHHHHHHHHHHHhchhhhhhhhHHHH
Confidence 9999999999999999999999888877533211 222 234667889999999999999999999
Q ss_pred HHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCcccceeeEeecCcccCCCCCCccCCCCC
Q 001568 335 ALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCY 414 (1051)
Q Consensus 335 ~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (1051)
..+..+++|+|+++|+.+++|+|+++|+||||||||||+|+|+|.++...+.
T Consensus 411 ~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~---------------------------- 462 (741)
T PRK11033 411 TSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATG---------------------------- 462 (741)
T ss_pred HHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCC----------------------------
Confidence 9999999999999999999999999999999999999999999999875331
Q ss_pred CChHHHHHHHHHHhhhccCccccCCCcccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhhhcccccccccccccc
Q 001568 415 NMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEW 494 (1051)
Q Consensus 415 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (1051)
..++. ++..++... ....||.+.|+++++++.+..
T Consensus 463 ~~~~~---~l~~aa~~e-----------~~s~hPia~Ai~~~a~~~~~~------------------------------- 497 (741)
T PRK11033 463 ISESE---LLALAAAVE-----------QGSTHPLAQAIVREAQVRGLA------------------------------- 497 (741)
T ss_pred CCHHH---HHHHHHHHh-----------cCCCCHHHHHHHHHHHhcCCC-------------------------------
Confidence 01111 222222111 124699999999998765542
Q ss_pred cccccceeEeecCCCCCceEE-EEEec-CCCcEEEEEcCChhHHHhhccccccCCCceecCCHHHHHHHHHHHHHHhhcc
Q 001568 495 WTKRSKRVATLEFDRIRKSMS-VIVRE-PTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKG 572 (1051)
Q Consensus 495 ~~~~~~~l~~~~F~s~rk~ms-viv~~-~~~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G 572 (1051)
+||.++++.+. .-++. .+|+. +.-|+++.+.+ ++ +.+.+.++++..+|
T Consensus 498 ----------~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~--------------~~----~~~~~~~~~~~~~g 547 (741)
T PRK11033 498 ----------IPEAESQRALAGSGIEGQVNGER--VLICAPGKLPP--------------LA----DAFAGQINELESAG 547 (741)
T ss_pred ----------CCCCcceEEEeeEEEEEEECCEE--EEEecchhhhh--------------cc----HHHHHHHHHHHhCC
Confidence 23334444432 11211 12332 33477776543 11 22444567889999
Q ss_pred ceEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCH
Q 001568 573 LRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNK 652 (1051)
Q Consensus 573 ~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~ 652 (1051)
+|++++|+ |.+++|+++++|++|+|++++|+.|+++|++++|+|||+.
T Consensus 548 ~~~v~va~--------------------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~ 595 (741)
T PRK11033 548 KTVVLVLR--------------------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNP 595 (741)
T ss_pred CEEEEEEE--------------------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCH
Confidence 99999985 3478999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCchhHHHHHHHHhhcCCEEEEEcCCccC
Q 001568 653 STAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVND 732 (1051)
Q Consensus 653 ~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND 732 (1051)
.+|.++|+++||. .++++.|++|.++|+.+|+. +.|+|+|||.||
T Consensus 596 ~~a~~ia~~lgi~----------------------------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiND 640 (741)
T PRK11033 596 RAAAAIAGELGID----------------------------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGIND 640 (741)
T ss_pred HHHHHHHHHcCCC----------------------------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHh
Confidence 9999999999994 35678999999999999965 589999999999
Q ss_pred HHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 001568 733 APALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIF 802 (1051)
Q Consensus 733 ~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~n~~~~~~~~ 802 (1051)
+|||++|||||||| ++++.++++||+++.++++..++.+++.||+++.+|++++.|.+.+|+..+...+
T Consensus 641 apAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~ 709 (741)
T PRK11033 641 APAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTL 709 (741)
T ss_pred HHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 8999999999999999999999999999999999999999999999987655444
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-72 Score=664.17 Aligned_cols=476 Identities=42% Similarity=0.609 Sum_probs=415.7
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHh--hcCceeEEEECCeeceEeeCCCccCCcEEEeCCCCcccccEEEEEecCCceEE
Q 001568 104 ILVLNAIVGVWQESNAEKALEALKK--IQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRV 181 (1051)
Q Consensus 104 ~~~i~~~i~~~~~~~~~~~~~~l~~--~~~~~~~V~r~g~~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~~~~g~~~V 181 (1051)
+++++.+++.++++++++.++.+.+ ..+++++|+|+| + ++|++++|+|||+|.+++||+|||||+|++ |.+.|
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~-~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~---g~~~v 79 (499)
T TIGR01494 5 LVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-W-KEIPASDLVPGDIVLVKSGEIVPADGVLLS---GSCFV 79 (499)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-e-EEEEHHHCCCCCEEEECCCCEeeeeEEEEE---ccEEE
Confidence 4456677889999999999999988 788899999999 7 899999999999999999999999999995 79999
Q ss_pred eccCCCCCCcccccCCCCCCCCcccccccccEEEeccEEEeceEEEEEEEeccchhhhHHHHHHhhccccCCCChhHHHH
Q 001568 182 EQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKL 261 (1051)
Q Consensus 182 des~LTGEs~pv~K~~~~~~~~~~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~~ 261 (1051)
|||+|||||.|+.|.++ +.+++||.+.+|+..+.|..+|.+|..+++...+... ...+++++++.
T Consensus 80 des~LTGEs~pv~k~~g-------------~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~--~~~k~~~~~~~ 144 (499)
T TIGR01494 80 DESNLTGESVPVLKTAG-------------DAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTG--FETKTPLQPKL 144 (499)
T ss_pred EcccccCCCCCeeeccC-------------CccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhc--CCCCCchHHHH
Confidence 99999999999999875 6699999999999999999999999999999988776 66688999999
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHH
Q 001568 262 DEFG-NRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRK 340 (1051)
Q Consensus 262 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~ 340 (1051)
+++. .+++++++++++++++.+...... . ..+...+.+++++++++|||+|++++++++..+..+
T Consensus 145 ~~~~~~~~~~~~~~la~~~~~~~~~~~~~----~----------~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~ 210 (499)
T TIGR01494 145 DRLSDIIFILFVLLIALAVFLFWAIGLWD----P----------NSIFKIFLRALILLVIAIPIALPLAVTIALAVGDAR 210 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcc----c----------ccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Confidence 9999 677777777766666654332110 0 012456788899999999999999999999999999
Q ss_pred hhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCcccceeeEeecCcccCCCCCCccCCCCCCChHHH
Q 001568 341 MAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420 (1051)
Q Consensus 341 l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (1051)
|+++|+++|+++++|+||++|++|||||||||+|+|++.+++..+.
T Consensus 211 ~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~---------------------------------- 256 (499)
T TIGR01494 211 LAKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG---------------------------------- 256 (499)
T ss_pred HHHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC----------------------------------
Confidence 9999999999999999999999999999999999999999875320
Q ss_pred HHHHHHHhhhccCccccCCCcccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhhhcccccccccccccccccccc
Q 001568 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSK 500 (1051)
Q Consensus 421 ~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (1051)
.+..+||.|.|++++++..
T Consensus 257 ---------------------~~~s~hp~~~ai~~~~~~~---------------------------------------- 275 (499)
T TIGR01494 257 ---------------------EYLSGHPDERALVKSAKWK---------------------------------------- 275 (499)
T ss_pred ---------------------CcCCCChHHHHHHHHhhhc----------------------------------------
Confidence 0124789999999887531
Q ss_pred eeEeecCCCCCceEEEEEecCCCcEEEEEcCChhHHHhhccccccCCCceecCCHHHHHHHHHHHHHHhhccceEEEEEE
Q 001568 501 RVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAY 580 (1051)
Q Consensus 501 ~l~~~~F~s~rk~msviv~~~~~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~a~ 580 (1051)
.+...||++.+++|+++++..++ .|+||+++.+.++|.+ +.+..++++.+|+|++++|+
T Consensus 276 ~~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~------------------~~~~~~~~~~~g~~~~~~a~ 334 (499)
T TIGR01494 276 ILNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD------------------LEEKVKELAQSGLRVLAVAS 334 (499)
T ss_pred CcceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH------------------HHHHHHHHHhCCCEEEEEEE
Confidence 12356999999999999985333 4789999999998852 12334567889999999997
Q ss_pred eccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHH
Q 001568 581 KDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660 (1051)
Q Consensus 581 k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~ 660 (1051)
+ .+++|++.++|++|++++++|+.|+++|++++|+|||+..+|..+|+
T Consensus 335 ~--------------------------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~ 382 (499)
T TIGR01494 335 K--------------------------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAK 382 (499)
T ss_pred C--------------------------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH
Confidence 4 15899999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCC
Q 001568 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLAD 740 (1051)
Q Consensus 661 ~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Ad 740 (1051)
++|+ ++|++|++|.++|+.+|+.|+.|+|+|||.||+||+++||
T Consensus 383 ~lgi------------------------------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Ad 426 (499)
T TIGR01494 383 ELGI------------------------------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKAD 426 (499)
T ss_pred HcCc------------------------------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCC
Confidence 9986 4689999999999999999999999999999999999999
Q ss_pred eeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 001568 741 IGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFL 803 (1051)
Q Consensus 741 vgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~n~~~~~~~~~ 803 (1051)
|||||| ++++||+++.++++..+..++++||+++.++++++.|.+++|+..+...++
T Consensus 427 vgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 427 VGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred Cccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999997 688999999999999999999999999999999999999999986665554
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-72 Score=638.04 Aligned_cols=557 Identities=23% Similarity=0.334 Sum_probs=437.3
Q ss_pred ccchhhhH-HHHHHHHHHHHHHHHhHHHHHHHHHHhhcCceeEEEECCeeceEeeCCCccCCcEEEeCCCCcccccEEEE
Q 001568 94 DYVEPLVI-VLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVA 172 (1051)
Q Consensus 94 ~~~~~~~i-~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll 172 (1051)
.|++...+ +.++.+..+++...+.|+...+..|..+.|.++.++.+|+..++|+.+.|++||+|.|.||++||+||+|+
T Consensus 339 tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv 418 (951)
T KOG0207|consen 339 TFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVV 418 (951)
T ss_pred hhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEE
Confidence 44443333 33444444444444445557888888889999999999962279999999999999999999999999999
Q ss_pred EecCCceEEeccCCCCCCcccccCCCCCCCCcccccccccEEEeccEEEeceEEEEEEEeccchhhhHHHHHHhhccccC
Q 001568 173 ALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEE 252 (1051)
Q Consensus 173 ~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 252 (1051)
+ |+++||||++|||+.|+.|+++ +.+.+||.+.+|.....++++|.||.+++|.++++++ +.
T Consensus 419 ~---Gss~VDEs~iTGEs~PV~Kk~g-------------s~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEA--Q~ 480 (951)
T KOG0207|consen 419 D---GSSEVDESLITGESMPVPKKKG-------------STVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEA--QL 480 (951)
T ss_pred e---CceeechhhccCCceecccCCC-------------CeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHH--Hc
Confidence 4 8999999999999999999886 7899999999999999999999999999999999999 89
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cccccCCCCcccccchhhHHHHHHHHHHHHHHhcCCchHHHHH
Q 001568 253 SDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFL-SWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVIT 331 (1051)
Q Consensus 253 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~ 331 (1051)
+++|+|+..|+++.+++++++++++..+++|.+... ...+...| +..+...|..++++++++|||+|.++.|
T Consensus 481 sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~-------~~~~~~a~~~aisVlviACPCaLgLATP 553 (951)
T KOG0207|consen 481 SKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSF-------FDAFSHAFQLAISVLVIACPCALGLATP 553 (951)
T ss_pred ccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchh-------hHHHHHHHHhhheEEEEECchhhhcCCc
Confidence 999999999999999999999998888887765432 11111112 2556777889999999999999999999
Q ss_pred HHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCcccceeeEeecCcccCCCCCCccCC
Q 001568 332 TCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDW 411 (1051)
Q Consensus 332 ~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (1051)
++.+.+....+++|+++|..+.+|.+.++++|+||||||||+|+++|.++....+.
T Consensus 554 tAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~------------------------ 609 (951)
T KOG0207|consen 554 TAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP------------------------ 609 (951)
T ss_pred eEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc------------------------
Confidence 99999999999999999999999999999999999999999999999998765421
Q ss_pred CCCCChHHHHHHHHHHhhhccCccccCCCcccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhhhccccccccccc
Q 001568 412 PCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGC 491 (1051)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (1051)
-..++++.+.+.- ...+.||...|++.+|+..+..... .
T Consensus 610 ------~~~~e~l~~v~a~-----------Es~SeHPig~AIv~yak~~~~~~~~------------------~------ 648 (951)
T KOG0207|consen 610 ------ISLKEALALVAAM-----------ESGSEHPIGKAIVDYAKEKLVEPNP------------------E------ 648 (951)
T ss_pred ------ccHHHHHHHHHHH-----------hcCCcCchHHHHHHHHHhcccccCc------------------c------
Confidence 0112222222211 1124699999999999976621100 0
Q ss_pred ccccccccceeEeecCCCCCceEEEEEecCCCcEEEEEcCChhHHHhhccccccCCCceecCCHHHHHHHHHHHHHHhhc
Q 001568 492 CEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSK 571 (1051)
Q Consensus 492 ~~~~~~~~~~l~~~~F~s~rk~msviv~~~~~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ 571 (1051)
..+..-.|.-+.+...+.+. ++. .+-|.-+.+.+.-. . .. +.+++.+++...+
T Consensus 649 --------~~~~~~~~pg~g~~~~~~~~---~~~--i~iGN~~~~~r~~~--------~--~~----~~i~~~~~~~e~~ 701 (951)
T KOG0207|consen 649 --------GVLSFEYFPGEGIYVTVTVD---GNE--VLIGNKEWMSRNGC--------S--IP----DDILDALTESERK 701 (951)
T ss_pred --------ccceeecccCCCcccceEEe---eeE--EeechHHHHHhcCC--------C--Cc----hhHHHhhhhHhhc
Confidence 00011111111111112221 111 55577666655321 1 11 2366777778889
Q ss_pred cceEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChhHHHHHHHHHhCCcEEEEEcCCC
Q 001568 572 GLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDN 651 (1051)
Q Consensus 572 G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~ 651 (1051)
|..+..++. |.+++|+++++|++|+|+.++|+.||+.||+++|+||||
T Consensus 702 g~tvv~v~v--------------------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn 749 (951)
T KOG0207|consen 702 GQTVVYVAV--------------------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDN 749 (951)
T ss_pred CceEEEEEE--------------------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCC
Confidence 999888885 457899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCchhHHHHHHHHhhcCCEEEEEcCCcc
Q 001568 652 KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVN 731 (1051)
Q Consensus 652 ~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~N 731 (1051)
..+|+++|+++|+. .|+|+..|+||.+.|+.+|++++.|+|+|||.|
T Consensus 750 ~~aA~svA~~VGi~---------------------------------~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGIN 796 (951)
T KOG0207|consen 750 DAAARSVAQQVGID---------------------------------NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGIN 796 (951)
T ss_pred HHHHHHHHHhhCcc---------------------------------eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCC
Confidence 99999999999963 499999999999999999999999999999999
Q ss_pred CHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 001568 732 DAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPE 811 (1051)
Q Consensus 732 D~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 811 (1051)
|+|||.+|||||||| .|+++|.++||++++.+++..++.++..+|++..|++.++.|.+.||+..+.+. .+.|+.++.
T Consensus 797 DaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIA-agvF~P~~~ 874 (951)
T KOG0207|consen 797 DAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIA-AGVFAPFGI 874 (951)
T ss_pred ccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhh-eecccCCcc
Confidence 999999999999999 889999999999999999999999999999999999999999999999754333 334443432
Q ss_pred chhHH---HHHHHHHHHhhhhhhhcc
Q 001568 812 CLIPV---QLLWVNLVTDGPPATALG 834 (1051)
Q Consensus 812 ~~~~~---~~l~~n~~~~~~~~l~l~ 834 (1051)
.+.|+ ..+..+.+...+.++.|-
T Consensus 875 ~L~Pw~A~lama~SSvsVv~sSllLk 900 (951)
T KOG0207|consen 875 VLPPWMASLAMAASSVSVVLSSLLLK 900 (951)
T ss_pred ccCchHHHHHHHhhhHHHhhhHHHHh
Confidence 23333 334445554444454443
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-70 Score=652.95 Aligned_cols=510 Identities=28% Similarity=0.396 Sum_probs=423.3
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCceeEEEECC-eeceEeeCCCccCCcEEEeCCCCcccccEEEE
Q 001568 94 DYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDG-YLVPDLPAIGLVPGDIVELGVGDKVPADMRVA 172 (1051)
Q Consensus 94 ~~~~~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r~g-~~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll 172 (1051)
.|.++++++++++++.+++.++++|+++.+++|.+..+++++|+|+| ++ ++|++++|+|||+|.|++||+|||||+|+
T Consensus 17 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~-~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi 95 (556)
T TIGR01525 17 LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSE-EEVPVEELQVGDIVIVRPGERIPVDGVVI 95 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeE-EEEEHHHCCCCCEEEECCCCEeccceEEE
Confidence 45677888999999999999999999999999999999999999996 88 89999999999999999999999999999
Q ss_pred EecCCceEEeccCCCCCCcccccCCCCCCCCcccccccccEEEeccEEEeceEEEEEEEeccchhhhHHHHHHhhccccC
Q 001568 173 ALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEE 252 (1051)
Q Consensus 173 ~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 252 (1051)
+ |++.||||+|||||.|+.|.++ +.+|+||.+.+|.++++|++||.+|.+|++.+.+.++ +.
T Consensus 96 ~---g~~~vdes~lTGEs~pv~k~~g-------------~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~--~~ 157 (556)
T TIGR01525 96 S---GESEVDESALTGESMPVEKKEG-------------DEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEA--QS 157 (556)
T ss_pred e---cceEEeehhccCCCCCEecCCc-------------CEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHH--hh
Confidence 5 7789999999999999999875 7899999999999999999999999999999999887 77
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhHHHHHHHHHHHHHHhcCCchHHHHHH
Q 001568 253 SDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITT 332 (1051)
Q Consensus 253 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~ 332 (1051)
+++|+++.+++++.++++++++++++++++++... .+ ..+..++++++++|||+|++++++
T Consensus 158 ~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~-------~~------------~~~~~~~~vlv~~~P~al~l~~~~ 218 (556)
T TIGR01525 158 SKAPIQRLADRIASYYVPAVLAIALLTFVVWLALG-------AL------------GALYRALAVLVVACPCALGLATPV 218 (556)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------cc------------hHHHHHHHHHhhccccchhehhHH
Confidence 88999999999999999988888888887754321 00 346678899999999999999999
Q ss_pred HHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCcccceeeEeecCcccCCCCCCccCCC
Q 001568 333 CLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWP 412 (1051)
Q Consensus 333 ~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (1051)
++..+.++++++|+++|+++++|+||++|++|||||||||+|+|+|.++...+...
T Consensus 219 ~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~------------------------ 274 (556)
T TIGR01525 219 AILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS------------------------ 274 (556)
T ss_pred HHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC------------------------
Confidence 99999999999999999999999999999999999999999999999987543100
Q ss_pred CCCChHHHHHHHHHHhhhccCccccCCCcccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhhhcccccccccccc
Q 001568 413 CYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCC 492 (1051)
Q Consensus 413 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (1051)
...+ +++..++.+. ....||.+.|+++++++.|.+...
T Consensus 275 --~~~~---~~l~~a~~~e-----------~~~~hp~~~Ai~~~~~~~~~~~~~-------------------------- 312 (556)
T TIGR01525 275 --ISEE---ELLALAAALE-----------QSSSHPLARAIVRYAKKRGLELPK-------------------------- 312 (556)
T ss_pred --ccHH---HHHHHHHHHh-----------ccCCChHHHHHHHHHHhcCCCccc--------------------------
Confidence 0011 1222222211 124689999999999877653210
Q ss_pred cccccccceeEeecCCCCCceEEEEEecCCCcEEEEEcCChhHHHhhccccccCCCceecCCHHHHHHHHHHHHHHhhcc
Q 001568 493 EWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKG 572 (1051)
Q Consensus 493 ~~~~~~~~~l~~~~F~s~rk~msviv~~~~~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G 572 (1051)
.+ ....++ .+.+...++ |. .-+..|+++.+ + . ++. . ...+.+.++.++++|
T Consensus 313 -----~~-~~~~~~----~~gi~~~~~---g~-~~~~lg~~~~~-~-~------~~~--~-----~~~~~~~~~~~~~~g 363 (556)
T TIGR01525 313 -----QE-DVEEVP----GKGVEATVD---GQ-EEVRIGNPRLL-E-L------AAE--P-----ISASPDLLNEGESQG 363 (556)
T ss_pred -----cc-CeeEec----CCeEEEEEC---Ce-eEEEEecHHHH-h-h------cCC--C-----chhhHHHHHHHhhCC
Confidence 00 000111 112222221 10 23344555543 1 0 111 0 111234556778899
Q ss_pred ceEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChhHHHHHHHHHhCC-cEEEEEcCCC
Q 001568 573 LRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAG-IEVMVITGDN 651 (1051)
Q Consensus 573 ~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~~g-i~v~~~TGd~ 651 (1051)
+|++.++. |.+++|.+.++|++||+++++|+.|+++| ++++|+|||+
T Consensus 364 ~~~~~v~~--------------------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~ 411 (556)
T TIGR01525 364 KTVVFVAV--------------------------------DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDN 411 (556)
T ss_pred cEEEEEEE--------------------------------CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCC
Confidence 99998884 34789999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCchhHHHHHHHHhhcCCEEEEEcCCcc
Q 001568 652 KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVN 731 (1051)
Q Consensus 652 ~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~N 731 (1051)
..++..+++++|+. .+|+++.|++|.++++.+++.++.|+|+|||.|
T Consensus 412 ~~~a~~i~~~lgi~---------------------------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~n 458 (556)
T TIGR01525 412 RSAAEAVAAELGID---------------------------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGIN 458 (556)
T ss_pred HHHHHHHHHHhCCC---------------------------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChh
Confidence 99999999999994 278889999999999999999999999999999
Q ss_pred CHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 001568 732 DAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIF 802 (1051)
Q Consensus 732 D~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~n~~~~~~~~ 802 (1051)
|++|+++||+|+++| ++++.+++.||+++.++++..+.++++.||+++.++++++.|.+.+|+..+.+.+
T Consensus 459 D~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 459 DAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred HHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 8999999999999999999999999999999999999999999999998765554
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-70 Score=644.36 Aligned_cols=504 Identities=27% Similarity=0.425 Sum_probs=420.9
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCccccchhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCceeEEEECCeeceEee
Q 001568 68 ILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLP 147 (1051)
Q Consensus 68 ~ll~~~ils~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~~I~ 147 (1051)
+++++++++++.+ .|+++.+++++++++.+++.++++|+++.++++.+..+++++|+|||++ ++++
T Consensus 4 l~~~a~~~~~~~~-------------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~-~~i~ 69 (536)
T TIGR01512 4 LMALAALGAVAIG-------------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSL-EEVA 69 (536)
T ss_pred HHHHHHHHHHHHh-------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEE-EEEE
Confidence 4455666666553 4677888888999999999999999999999999999999999999999 9999
Q ss_pred CCCccCCcEEEeCCCCcccccEEEEEecCCceEEeccCCCCCCcccccCCCCCCCCcccccccccEEEeccEEEeceEEE
Q 001568 148 AIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVC 227 (1051)
Q Consensus 148 ~~~Lv~GDII~l~~G~~vPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~~l~aGt~v~~g~~~~ 227 (1051)
+++|+|||+|.|++||+|||||++++ |++.||||+|||||.|+.|.++ +.+|+||.+.+|.+++
T Consensus 70 ~~~l~~GDiv~v~~G~~iP~Dg~ii~---g~~~vdes~lTGEs~pv~k~~g-------------~~v~aGt~v~~G~~~~ 133 (536)
T TIGR01512 70 VEELKVGDVVVVKPGERVPVDGVVLS---GTSTVDESALTGESVPVEKAPG-------------DEVFAGAINLDGVLTI 133 (536)
T ss_pred HHHCCCCCEEEEcCCCEeecceEEEe---CcEEEEecccCCCCCcEEeCCC-------------CEEEeeeEECCceEEE
Confidence 99999999999999999999999995 7889999999999999999875 7899999999999999
Q ss_pred EEEEeccchhhhHHHHHHhhccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhH
Q 001568 228 IVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKC 307 (1051)
Q Consensus 228 ~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (1051)
+|++||.+|.+|++.+.+.++ +.+++|+++.+++++++++++++++++++|++++.. ..|
T Consensus 134 ~V~~~g~~t~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~----------- 193 (536)
T TIGR01512 134 VVTKLPADSTIAKIVNLVEEA--QSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLL-------KRW----------- 193 (536)
T ss_pred EEEEeccccHHHHHHHHHHHH--hhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccc-----------
Confidence 999999999999999999887 778899999999999999998888888777765432 112
Q ss_pred HHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCc
Q 001568 308 TYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRK 387 (1051)
Q Consensus 308 ~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 387 (1051)
...+.+++++++++|||+|++++++++..+.++++++|+++|+++++|++|++|++|||||||||+|+|++.++...
T Consensus 194 ~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~--- 270 (536)
T TIGR01512 194 PFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA--- 270 (536)
T ss_pred HHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH---
Confidence 12566788999999999999999999999999999999999999999999999999999999999999999887521
Q ss_pred ccceeeEeecCcccCCCCCCccCCCCCCChHHHHHHHHHHhhhccCccccCCCcccccCCchHHHHHHHHHHcCCCCCCC
Q 001568 388 TTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKG 467 (1051)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~ 467 (1051)
+++..++.+. ....||.+.|+++++++.+ ...
T Consensus 271 ----------------------------------~~l~~a~~~e-----------~~~~hp~~~Ai~~~~~~~~-~~~-- 302 (536)
T TIGR01512 271 ----------------------------------EVLRLAAAAE-----------QASSHPLARAIVDYARKRE-NVE-- 302 (536)
T ss_pred ----------------------------------HHHHHHHHHh-----------ccCCCcHHHHHHHHHHhcC-CCc--
Confidence 1122222111 1246899999999987654 110
Q ss_pred CcccchhhhhhhhcccccccccccccccccccceeEeecCCCCCceEEEEEecCCCcEEEEEcCChhHHHhhccccccCC
Q 001568 468 RNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLAD 547 (1051)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~~~~~~~~~KGa~e~i~~~c~~~~~~~ 547 (1051)
....+| .+.+...+ +|.. +..|+++.+.+..
T Consensus 303 ---------------------------------~~~~~~----g~gi~~~~---~g~~--~~ig~~~~~~~~~------- 333 (536)
T TIGR01512 303 ---------------------------------SVEEVP----GEGVRAVV---DGGE--VRIGNPRSLEAAV------- 333 (536)
T ss_pred ---------------------------------ceEEec----CCeEEEEE---CCeE--EEEcCHHHHhhcC-------
Confidence 001111 11122222 2222 3357765443210
Q ss_pred CceecCCHHHHHHHHHHHHHHhhccceEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCC
Q 001568 548 GSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPR 627 (1051)
Q Consensus 548 ~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr 627 (1051)
. ..+..+|.+++.++ .|..++|.+.++|++|
T Consensus 334 -----~------------~~~~~~~~~~~~v~--------------------------------~~~~~~g~i~~~d~l~ 364 (536)
T TIGR01512 334 -----G------------ARPESAGKTIVHVA--------------------------------RDGTYLGYILLSDEPR 364 (536)
T ss_pred -----C------------cchhhCCCeEEEEE--------------------------------ECCEEEEEEEEeccch
Confidence 0 03445666665444 3568999999999999
Q ss_pred hhHHHHHHHHHhCCc-EEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCc
Q 001568 628 GGVDKAIDDCRGAGI-EVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEP 706 (1051)
Q Consensus 628 ~~~~~~I~~l~~~gi-~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p 706 (1051)
++++++|+.|+++|+ +++|+|||+..++..+++++|+.. +|+++.|
T Consensus 365 ~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---------------------------------~f~~~~p 411 (536)
T TIGR01512 365 PDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE---------------------------------VHAELLP 411 (536)
T ss_pred HHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh---------------------------------hhhccCc
Confidence 999999999999999 999999999999999999999942 5778899
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHHHHHHHhHHHH
Q 001568 707 RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAF 786 (1051)
Q Consensus 707 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~ 786 (1051)
++|.++++.+++.++.|+|+|||.||++|+++||+||++|.++++.++++||+++.++++..+.+++..||+++.+++++
T Consensus 412 ~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n 491 (536)
T TIGR01512 412 EDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQN 491 (536)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999996689999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 001568 787 IRYMISSNVGEVISIFL 803 (1051)
Q Consensus 787 ~~~~~~~n~~~~~~~~~ 803 (1051)
+.|.+.+|+..+.+.++
T Consensus 492 l~~a~~~n~~~i~~a~~ 508 (536)
T TIGR01512 492 VVIALGIILLLILLALF 508 (536)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999876665543
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-68 Score=634.67 Aligned_cols=493 Identities=27% Similarity=0.426 Sum_probs=410.8
Q ss_pred cch-hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCceeEEEEC-CeeceEeeCCCccCCcEEEeCCCCcccccEEEE
Q 001568 95 YVE-PLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRD-GYLVPDLPAIGLVPGDIVELGVGDKVPADMRVA 172 (1051)
Q Consensus 95 ~~~-~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r~-g~~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll 172 (1051)
|++ +.++++++.+..+++.+.++|+++.+++|.+..|++++++|+ |++ ++|+.++|+|||+|.|++||+|||||+|+
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~-~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~ 131 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSI-EEVPVALLQPGDIVKVLPGEKIPVDGTVI 131 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeE-EEEEHHHCCCCCEEEECCCCEecCceEEE
Confidence 444 445566777778889999999999999999999999999985 666 89999999999999999999999999999
Q ss_pred EecCCceEEeccCCCCCCcccccCCCCCCCCcccccccccEEEeccEEEeceEEEEEEEeccchhhhHHHHHHhhccccC
Q 001568 173 ALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEE 252 (1051)
Q Consensus 173 ~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 252 (1051)
+ |++.||||+|||||.|+.|.++ +.+|+||.+.+|.++++|+++|.+|.+|++.+++.++ +.
T Consensus 132 ~---g~~~vdes~lTGEs~pv~k~~g-------------d~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a--~~ 193 (562)
T TIGR01511 132 E---GESEVDESLVTGESLPVPKKVG-------------DPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQA--QQ 193 (562)
T ss_pred E---CceEEehHhhcCCCCcEEcCCC-------------CEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHH--Hh
Confidence 5 7889999999999999999875 7899999999999999999999999999999999888 77
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhHHHHHHHHHHHHHHhcCCchHHHHHH
Q 001568 253 SDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITT 332 (1051)
Q Consensus 253 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~ 332 (1051)
+++|+++..++++.++++++++++++.++++. ..+.+++++++++|||+|++++++
T Consensus 194 ~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------------------------~~~~~~~svlvvacPcaL~la~p~ 249 (562)
T TIGR01511 194 SKAPIQRLADKVAGYFVPVVIAIALITFVIWL------------------------FALEFAVTVLIIACPCALGLATPT 249 (562)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------HHHHHHHHHHHHhccchhhhHHHH
Confidence 88999999999999999888888777766532 236678999999999999999999
Q ss_pred HHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCcccceeeEeecCcccCCCCCCccCCC
Q 001568 333 CLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWP 412 (1051)
Q Consensus 333 ~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (1051)
++..+..+++++|+++|++.++|+|+++|+||||||||||+|+|++.++...+..
T Consensus 250 a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~------------------------- 304 (562)
T TIGR01511 250 VIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR------------------------- 304 (562)
T ss_pred HHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC-------------------------
Confidence 9999999999999999999999999999999999999999999999998654310
Q ss_pred CCCChHHHHHHHHHHhhhccCccccCCCcccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhhhcccccccccccc
Q 001568 413 CYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCC 492 (1051)
Q Consensus 413 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (1051)
.++.+.. .+++++.. ..||.+.|+++++++.+......
T Consensus 305 ---~~~~~l~--~aa~~e~~------------s~HPia~Ai~~~~~~~~~~~~~~------------------------- 342 (562)
T TIGR01511 305 ---DRTELLA--LAAALEAG------------SEHPLAKAIVSYAKEKGITLVEV------------------------- 342 (562)
T ss_pred ---CHHHHHH--HHHHHhcc------------CCChHHHHHHHHHHhcCCCcCCC-------------------------
Confidence 1111221 22233321 35899999999998776532110
Q ss_pred cccccccceeEeecCCCCCceEEEEEecCCCcEEEEEcCChhHHHhhccccccCCCceecCCHHHHHHHHHHHHHHhhcc
Q 001568 493 EWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKG 572 (1051)
Q Consensus 493 ~~~~~~~~~l~~~~F~s~rk~msviv~~~~~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G 572 (1051)
.....+| .+.+...++ | .-+..|+++.+.+. +. .++ ++.++|
T Consensus 343 -------~~~~~~~----g~Gi~~~~~---g--~~~~iG~~~~~~~~--------~~--~~~------------~~~~~g 384 (562)
T TIGR01511 343 -------SDFKAIP----GIGVEGTVE---G--TKIQLGNEKLLGEN--------AI--KID------------GKAEQG 384 (562)
T ss_pred -------CCeEEEC----CceEEEEEC---C--EEEEEECHHHHHhC--------CC--CCC------------hhhhCC
Confidence 0001111 122222222 2 23556888765432 11 011 123578
Q ss_pred ceEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCH
Q 001568 573 LRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNK 652 (1051)
Q Consensus 573 ~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~ 652 (1051)
.+++.++ .|.+++|++.++|++||+++++|+.|++.|++++|+|||+.
T Consensus 385 ~~~~~~~--------------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~ 432 (562)
T TIGR01511 385 STSVLVA--------------------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNR 432 (562)
T ss_pred CEEEEEE--------------------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCH
Confidence 7877665 35689999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCchhHHHHHHHHhhcCCEEEEEcCCccC
Q 001568 653 STAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVND 732 (1051)
Q Consensus 653 ~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND 732 (1051)
.++..+++++|+. +|+++.|++|.++++.++++++.|+|+|||.||
T Consensus 433 ~~a~~ia~~lgi~----------------------------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD 478 (562)
T TIGR01511 433 KTAKAVAKELGIN----------------------------------VRAEVLPDDKAALIKELQEKGRVVAMVGDGIND 478 (562)
T ss_pred HHHHHHHHHcCCc----------------------------------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCcc
Confidence 9999999999982 577889999999999999999999999999999
Q ss_pred HHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 001568 733 APALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIF 802 (1051)
Q Consensus 733 ~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~n~~~~~~~~ 802 (1051)
++|+++||+||+|| .+++.++++||+++.++++..+.++++.||+++.++++++.|.+.+|+..+.+.+
T Consensus 479 ~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~ 547 (562)
T TIGR01511 479 APALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAA 547 (562)
T ss_pred HHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 8899999999999999999999999999999999999999999999997654443
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-67 Score=653.46 Aligned_cols=507 Identities=27% Similarity=0.368 Sum_probs=423.2
Q ss_pred cch-hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCceeEEEECCeeceEeeCCCccCCcEEEeCCCCcccccEEEEE
Q 001568 95 YVE-PLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAA 173 (1051)
Q Consensus 95 ~~~-~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~ 173 (1051)
|++ +..+++++.+..+++.+.+.|+++.+++|.++.|++++++|+|++ ++|+.++|+|||+|.|++||+|||||+|++
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~-~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~ 363 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGE-KSVPLADVQPGMLLRLTTGDRVPVDGEITQ 363 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcE-EEEEHHHcCCCCEEEEcCCCEeeeeEEEEE
Confidence 445 566777788888899999999999999999999999999999998 899999999999999999999999999995
Q ss_pred ecCCceEEeccCCCCCCcccccCCCCCCCCcccccccccEEEeccEEEeceEEEEEEEeccchhhhHHHHHHhhccccCC
Q 001568 174 LKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEES 253 (1051)
Q Consensus 174 ~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 253 (1051)
|++.||||+|||||.|+.|.++ +.+|+||.+.+|.+.++|+++|.+|.+|++.++++++ +.+
T Consensus 364 ---g~~~vdeS~lTGEs~pv~k~~g-------------d~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a--~~~ 425 (834)
T PRK10671 364 ---GEAWLDEAMLTGEPIPQQKGEG-------------DSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQA--QSS 425 (834)
T ss_pred ---ceEEEeehhhcCCCCCEecCCC-------------CEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHH--hcc
Confidence 7899999999999999999886 7899999999999999999999999999999999988 777
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 001568 254 DTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTC 333 (1051)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~ 333 (1051)
++++++..++++.++++++++++++.+++++.. +.+ ..+...+.+++++++++|||+|+++++++
T Consensus 426 k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~-------~~~--------~~~~~~~~~a~~vlv~acPcaL~la~p~a 490 (834)
T PRK10671 426 KPEIGQLADKISAVFVPVVVVIALVSAAIWYFF-------GPA--------PQIVYTLVIATTVLIIACPCALGLATPMS 490 (834)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------CCc--------hHHHHHHHHHHHHHHHhcccchhhhHHHH
Confidence 899999999999999998888888777665432 111 01234567789999999999999999999
Q ss_pred HHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCeEEEEEEecCCcccceeeEeecCcccCCCCCCccCCCC
Q 001568 334 LALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPC 413 (1051)
Q Consensus 334 ~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (1051)
+..+..+++++|+++|+.+++|+||++|++|||||||||+|+|+|.++...+.
T Consensus 491 ~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~--------------------------- 543 (834)
T PRK10671 491 IISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNG--------------------------- 543 (834)
T ss_pred HHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCC---------------------------
Confidence 99999999999999999999999999999999999999999999998765321
Q ss_pred CCChHHHHHHHHHHhhhccCccccCCCcccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhhhccccccccccccc
Q 001568 414 YNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCE 493 (1051)
Q Consensus 414 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (1051)
.... +.+..+++++.. ..||.+.|++++++..+....
T Consensus 544 -~~~~--~~l~~a~~~e~~------------s~hp~a~Ai~~~~~~~~~~~~---------------------------- 580 (834)
T PRK10671 544 -VDEA--QALRLAAALEQG------------SSHPLARAILDKAGDMTLPQV---------------------------- 580 (834)
T ss_pred -CCHH--HHHHHHHHHhCC------------CCCHHHHHHHHHHhhCCCCCc----------------------------
Confidence 0011 112223333332 369999999988764321100
Q ss_pred ccccccceeEeecCCCCCceEEEEEecCCCcEEEEEcCChhHHHhhccccccCCCceecCCHHHHHHHHHHHHHHhhccc
Q 001568 494 WWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGL 573 (1051)
Q Consensus 494 ~~~~~~~~l~~~~F~s~rk~msviv~~~~~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~ 573 (1051)
..++ .+| .+.+...+ +| ..+.+|+++.+.+.. ++ ++.+.+.++++.++|.
T Consensus 581 ---~~~~---~~~----g~Gv~~~~---~g--~~~~~G~~~~~~~~~------------~~---~~~~~~~~~~~~~~g~ 630 (834)
T PRK10671 581 ---NGFR---TLR----GLGVSGEA---EG--HALLLGNQALLNEQQ------------VD---TKALEAEITAQASQGA 630 (834)
T ss_pred ---ccce---Eec----ceEEEEEE---CC--EEEEEeCHHHHHHcC------------CC---hHHHHHHHHHHHhCCC
Confidence 0000 000 01111111 22 235669998765421 11 1234556677888999
Q ss_pred eEEEEEEeccccccccccccCcccccccCCCccccccCCCeEEEEEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCHH
Q 001568 574 RCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKS 653 (1051)
Q Consensus 574 rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ 653 (1051)
+++.+|+ |..++|+++++|++|++++++|+.|++.|++++|+|||+..
T Consensus 631 ~~v~va~--------------------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~ 678 (834)
T PRK10671 631 TPVLLAV--------------------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPT 678 (834)
T ss_pred eEEEEEE--------------------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHH
Confidence 9998885 33589999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCchhHHHHHHHHhhcCCEEEEEcCCccCH
Q 001568 654 TAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDA 733 (1051)
Q Consensus 654 ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~ 733 (1051)
++..+++++|+. .+++++.|++|.++++.++.+++.|+|+|||.||+
T Consensus 679 ~a~~ia~~lgi~---------------------------------~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~ 725 (834)
T PRK10671 679 TANAIAKEAGID---------------------------------EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDA 725 (834)
T ss_pred HHHHHHHHcCCC---------------------------------EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHH
Confidence 999999999994 37889999999999999999999999999999999
Q ss_pred HHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 001568 734 PALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISI 801 (1051)
Q Consensus 734 ~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~n~~~~~~~ 801 (1051)
+|+++||+||||| +|++.++++||+++.++++..+..+++.||+.+.++++++.|.+.+|+..+.+.
T Consensus 726 ~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a 792 (834)
T PRK10671 726 PALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIA 792 (834)
T ss_pred HHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 899999999999999999999999999999999999999999999999775544
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-59 Score=498.77 Aligned_cols=557 Identities=25% Similarity=0.346 Sum_probs=420.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCCCCCCccccch--hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCc-eeEEE
Q 001568 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVE--PLVIVLILVLNAIVGVWQESNAEKALEALKKIQCE-SGKVL 137 (1051)
Q Consensus 61 f~~~~~~~ll~~~ils~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~-~~~V~ 137 (1051)
.++|..++-++.++++.++.+++..-+..+....|.. .+++.+.+++..+-+...|-|.+...++|++.+.+ .++++
T Consensus 30 ~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l 109 (681)
T COG2216 30 VKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLL 109 (681)
T ss_pred hhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHh
Confidence 4566666666666666544443321111111112221 12222333344445555666777777778766543 56777
Q ss_pred EC-CeeceEeeCCCccCCcEEEeCCCCcccccEEEEEecCCceEEeccCCCCCCcccccCCCCCCCCcccccccccEEEe
Q 001568 138 RD-GYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFA 216 (1051)
Q Consensus 138 r~-g~~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~~l~a 216 (1051)
++ |.. +.+++.+|+.||+|.|++||.||+||.+++ |...||||.+||||-||.|.++.. .+-+-.
T Consensus 110 ~~~g~~-~~v~st~Lk~gdiV~V~age~IP~DGeVIe---G~asVdESAITGESaPViresGgD----------~ssVtG 175 (681)
T COG2216 110 RADGSI-EMVPATELKKGDIVLVEAGEIIPSDGEVIE---GVASVDESAITGESAPVIRESGGD----------FSSVTG 175 (681)
T ss_pred cCCCCe-eeccccccccCCEEEEecCCCccCCCeEEe---eeeecchhhccCCCcceeeccCCC----------cccccC
Confidence 76 787 899999999999999999999999999995 888999999999999999988632 244899
Q ss_pred ccEEEeceEEEEEEEeccchhhhHHHHHHhhccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCC
Q 001568 217 GTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGW 296 (1051)
Q Consensus 217 Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1051)
||.+++.+.+..++....+|.+-|+..+++.+ ++++||-+..++-+..-+.++.++.....+-+. .|. ++-
T Consensus 176 gT~v~SD~l~irita~pG~sFlDrMI~LVEgA--~R~KTPNEIAL~iLL~~LTliFL~~~~Tl~p~a--~y~-----~g~ 246 (681)
T COG2216 176 GTRVLSDWLKIRITANPGETFLDRMIALVEGA--ERQKTPNEIALTILLSGLTLIFLLAVATLYPFA--IYS-----GGG 246 (681)
T ss_pred CcEEeeeeEEEEEEcCCCccHHHHHHHHhhch--hccCChhHHHHHHHHHHHHHHHHHHHHhhhhHH--HHc-----CCC
Confidence 99999999999999999999999999999988 889999877666554444333332222222111 111 000
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHHhhhcCcccccCccccccCceeEEecCCCcccccCCe
Q 001568 297 PANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQM 376 (1051)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~Lg~v~~I~~DKTGTLT~n~m 376 (1051)
...+...++++++.+|-.+.-.++..-..++.|+.+.+++.++..++|..|.||++..|||||+|-|+-
T Consensus 247 -----------~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR 315 (681)
T COG2216 247 -----------AASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNR 315 (681)
T ss_pred -----------CcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecch
Confidence 112344578899999999999888888889999999999999999999999999999999999999987
Q ss_pred EEEEEEecCCcccceeeEeecCcccCCCCCCccCCCCCCChHHHHHHHHHHhhhccCccccCCCcccccCCchHHHHHHH
Q 001568 377 SVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVL 456 (1051)
Q Consensus 377 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~ 456 (1051)
.-.++.+.+. .. .+++++.+.+++-. -..|.-..++++
T Consensus 316 ~A~~f~p~~g----------------------------v~---~~~la~aa~lsSl~-----------DeTpEGrSIV~L 353 (681)
T COG2216 316 QASEFIPVPG----------------------------VS---EEELADAAQLASLA-----------DETPEGRSIVEL 353 (681)
T ss_pred hhhheecCCC----------------------------CC---HHHHHHHHHHhhhc-----------cCCCCcccHHHH
Confidence 7777765431 11 23444444443311 124667889999
Q ss_pred HHHcCCCCCCCCcccchhhhhhhhcccccccccccccccccccceeEeecCCCCCceEEEEEecCCCcEEEEEcCChhHH
Q 001568 457 VEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESL 536 (1051)
Q Consensus 457 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~rk~msviv~~~~~~~~~~~KGa~e~i 536 (1051)
|++.|+...... .. .....+||+.+.|+..+-.. ++ .-+-|||.+.+
T Consensus 354 A~~~~~~~~~~~---------------------------~~--~~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai 400 (681)
T COG2216 354 AKKLGIELREDD---------------------------LQ--SHAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAI 400 (681)
T ss_pred HHHhccCCCccc---------------------------cc--ccceeeecceecccccccCC--CC--ceeecccHHHH
Confidence 999886432110 00 02356799987765554433 22 66789999999
Q ss_pred HhhccccccCCCceecCCHHHHHHHHHHHHHHhhccceEEEEEEeccccccccccccCcccccccCCCccccccCCCeEE
Q 001568 537 LERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVF 616 (1051)
Q Consensus 537 ~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~ 616 (1051)
.++.+. .+... .+.+.+..++.++.|=..++++. |..+
T Consensus 401 ~~~v~~----~~g~~------p~~l~~~~~~vs~~GGTPL~V~~--------------------------------~~~~ 438 (681)
T COG2216 401 RRYVRE----RGGHI------PEDLDAAVDEVSRLGGTPLVVVE--------------------------------NGRI 438 (681)
T ss_pred HHHHHh----cCCCC------CHHHHHHHHHHHhcCCCceEEEE--------------------------------CCEE
Confidence 988652 11111 24467788889999989888873 5578
Q ss_pred EEEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhc
Q 001568 617 VGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKH 696 (1051)
Q Consensus 617 lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~ 696 (1051)
+|++.++|-+|++.+|-+.+||+.|||.+|+||||+.||..||++.|++.
T Consensus 439 ~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd------------------------------ 488 (681)
T COG2216 439 LGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------------------------ 488 (681)
T ss_pred EEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh------------------------------
Confidence 99999999999999999999999999999999999999999999999964
Q ss_pred CCeEEEEeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHH
Q 001568 697 GGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEG 776 (1051)
Q Consensus 697 ~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~g 776 (1051)
..|+++|++|.++|+.-|..|+.|+|+|||.||+|+|.+||||+||. +|+..||++++++-+|.|...+.+.++.|
T Consensus 489 ---fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IG 564 (681)
T COG2216 489 ---FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIG 564 (681)
T ss_pred ---hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhh
Confidence 35689999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHH
Q 001568 777 RSIYNNMKAFIRYMISSNVGEVISIF 802 (1051)
Q Consensus 777 R~~~~~i~~~~~~~~~~n~~~~~~~~ 802 (1051)
++..-.--..-.|++...++-.+.++
T Consensus 565 KqlLiTRGaLTTFSIANDvAKYFaIi 590 (681)
T COG2216 565 KQLLITRGALTTFSIANDVAKYFAII 590 (681)
T ss_pred hhheeecccceeeehhhHHHHHHHHH
Confidence 99887766677777766665544443
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=305.99 Aligned_cols=228 Identities=33% Similarity=0.560 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCce-eEEEECCeeceEeeCCCccCCcEEEeCCCCcccccEEEEEecCCce
Q 001568 101 IVLILVLNAIVGVWQESNAEKALEALKKIQCES-GKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSL 179 (1051)
Q Consensus 101 i~~~~~i~~~i~~~~~~~~~~~~~~l~~~~~~~-~~V~r~g~~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~~~~g~~ 179 (1051)
++++++++.+++.++++|+++.++++++..+++ ++|+|||++ ++++++||+|||+|.|++||++||||++++ +|.+
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~-~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~--~g~~ 78 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRW-QKIPSSELVPGDIIILKAGDIVPADGILLE--SGSA 78 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEE-EEEEGGGT-TTSEEEEETTEBESSEEEEEE--SSEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEecccc-ccchHhhccceeeeecccccccccCcccee--cccc
Confidence 566777888899999999999999998888887 999999999 999999999999999999999999999996 6999
Q ss_pred EEeccCCCCCCcccccCCCCCCCCcccccccccEEEeccEEEeceEEEEEEEeccchhhhHHHHHHhhccccCCCChhHH
Q 001568 180 RVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRK 259 (1051)
Q Consensus 180 ~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~ 259 (1051)
.||||.+|||+.|+.|.+. ..+.+|++|+||.+.+|+++++|++||.+|+.|++.+....+ +.+++++++
T Consensus 79 ~vd~s~ltGes~pv~k~~~--------~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~--~~~~~~~~~ 148 (230)
T PF00122_consen 79 YVDESALTGESEPVKKTPL--------PLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKS--ESKKSPLER 148 (230)
T ss_dssp EEECHHHHSBSSEEEESSS--------CCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTS--CSS-THHHH
T ss_pred ccccccccccccccccccc--------cccccchhhccccccccccccccceeeecccccccccccccc--cccchhhhh
Confidence 9999999999999999853 334569999999999999999999999999999999988776 667799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhH
Q 001568 260 KLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTR 339 (1051)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~ 339 (1051)
.++++..++.+++++++++++++++.... ..+| ...+..++++++.+||++||+++++++..+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----------~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~ 213 (230)
T PF00122_consen 149 KLNKIAKILIIIILAIAILVFIIWFFNDS----GISF-----------FKSFLFAISLLIVLIPCALPLALPLSLAIAAR 213 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCHTGST----TCHC-----------CHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHhcccccchhhhccceeccc----cccc-----------ccccccccceeeeecccceeehHHHHHHHHHH
Confidence 99999999998888888877765443200 0222 45577789999999999999999999999999
Q ss_pred HhhhcCcccccCccccc
Q 001568 340 KMAQKNAIVRKLPSVET 356 (1051)
Q Consensus 340 ~l~~~~i~vk~~~~~e~ 356 (1051)
+|.++|+++|+++++|+
T Consensus 214 ~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 214 RLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHTTEEESSTTHHHH
T ss_pred HHHHCCEEEeCcccccC
Confidence 99999999999999984
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-29 Score=272.13 Aligned_cols=493 Identities=15% Similarity=0.154 Sum_probs=311.3
Q ss_pred cCChhHHHhhccccccCCCceecCCHHHHHHHHHHHHHHhhccceEEEEEEeccccc--------cccccc-----cC--
Q 001568 530 KGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGE--------FSDYYS-----ES-- 594 (1051)
Q Consensus 530 KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~a~k~l~~~--------~~~~~~-----~~-- 594 (1051)
-|-.....+.|++.|+ .....|++..+|.+.++.+.+-.-.| .++++|||+.... +.+... +.
T Consensus 697 ~g~ad~~~eACTdfWd-Gadi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T 774 (1354)
T KOG4383|consen 697 FGFADFFEEACTDFWD-GADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIET 774 (1354)
T ss_pred ccHHHHHHHHhhhhcC-CceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhh
Confidence 3556778889999986 45678999999999999988888778 5889999965311 100000 00
Q ss_pred -----c------cccc--ccCC--------CccccccCCCeEEEEEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCHH
Q 001568 595 -----H------PAHK--KLLD--------PSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKS 653 (1051)
Q Consensus 595 -----~------~~~~--~~~~--------~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ 653 (1051)
+ ++.+ ...+ .+.....-.+.+|+|++..+.+.+.+....|+.|.++.||++.+|-+++.
T Consensus 775 ~celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdEL 854 (1354)
T KOG4383|consen 775 ACELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDEL 854 (1354)
T ss_pred hccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHH
Confidence 0 0000 0000 11222334678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCcccc--------------------------------ccCchHHhcCCHH--------------
Q 001568 654 TAEAICRQIKLFSGNEDLTGR--------------------------------SFTGKEFMALSST-------------- 687 (1051)
Q Consensus 654 ta~~ia~~~gi~~~~~~~~~~--------------------------------~~~g~~~~~l~~~-------------- 687 (1051)
..+.+|+++||..+|++..+. ..+..+...+..|
T Consensus 855 kSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~ds 934 (1354)
T KOG4383|consen 855 KSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDS 934 (1354)
T ss_pred HHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCcccccccc
Confidence 999999999999988753110 0011111001000
Q ss_pred --------------------------HHHHHHHhcCCeEEEEeCchhHHHHHHHHhhcCCEEEEEcCCcc--CHHHHHhC
Q 001568 688 --------------------------QQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVN--DAPALKLA 739 (1051)
Q Consensus 688 --------------------------~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~N--D~~~l~~A 739 (1051)
+++++.. .+.+|.+++|+.-.+||+.+|++|++|+++|...| ....+.+|
T Consensus 935 di~kf~ed~N~AkLPrGihnVRPHL~~iDNVPL--LV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflka 1012 (1354)
T KOG4383|consen 935 DIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPL--LVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKA 1012 (1354)
T ss_pred chhhhcCCCchhhcCcchhhcCcccccccCcce--eeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEcc
Confidence 0111111 34589999999999999999999999999999988 45567899
Q ss_pred CeeEEeCCCc------------cHH------------------HHhccCeeecCCCchHHHHHHHHHHHHHHhHHHHHHH
Q 001568 740 DIGVAMGITG------------TEV------------------AKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRY 789 (1051)
Q Consensus 740 dvgia~g~~~------------~~~------------------a~~~ad~~l~~~~~~~i~~~i~~gR~~~~~i~~~~~~ 789 (1051)
|++||+..-. +.. ..-++|+.+.....-.+.++|+.+|+....+|+++.|
T Consensus 1013 dISialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLF 1092 (1354)
T KOG4383|consen 1013 DISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLF 1092 (1354)
T ss_pred ceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 9999984100 000 1112344444445667888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhhhh-ccCCCCCcccccCCCCCCCCCCc--chHHHHHHHHH
Q 001568 790 MISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATA-LGFNPADVDIMQKPPRKIDDALI--NSWVLLRYLVI 866 (1051)
Q Consensus 790 ~~~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~l~-l~~~~~~~~~~~~~p~~~~~~~~--~~~~~~~~~~~ 866 (1051)
.++..+..++++|+..++.+|..++..+++|..++..++..+. +-..++.+.+|.+...++...+- .+..++..++.
T Consensus 1093 iLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~maagKNlqeIPKk~kh~fllcFil 1172 (1354)
T KOG4383|consen 1093 ILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIMAAGKNLQEIPKKEKHKFLLCFIL 1172 (1354)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEeeccCChhhcccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999886544443 22234444455444333322222 22223222221
Q ss_pred H-HHHHHHHHHHHHHHHhhcccccccccCCCCcccccccccccCccCCCCCccccccccCCCcccccCCCCccccccccc
Q 001568 867 G-SYVGIATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVK 945 (1051)
Q Consensus 867 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 945 (1051)
- ...+..+.+.|.+..+.. .. ...+. |-..|.. .++++......... +-|..|+..
T Consensus 1173 kFsls~ssclIcFgf~L~af--cd--~~~d~----------n~~nC~~--------~m~~S~ddqa~a~F-edfangL~s 1229 (1354)
T KOG4383|consen 1173 KFSLSASSCLICFGFLLMAF--CD--LMCDF----------NDINCLF--------NMDGSADDQALAEF-EDFANGLGS 1229 (1354)
T ss_pred HhhhhHHHHHHHHHHHHHHh--hh--hhccc----------cccceee--------ccCCCcCcccchhH-HHHHhhhhh
Confidence 1 111111112222211111 10 11110 0011211 11111000000000 112344555
Q ss_pred hhHHHHHHHHHHHHHHhhhccccCCCccccCCCCChHHHHHHHHHHHHHHHHHh----cc---ccccccccccCChhhHH
Q 001568 946 AMTLSLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILY----VP---FLADVFGVVPLNLNEWF 1018 (1051)
Q Consensus 946 a~t~~f~~lv~~q~~~~~~~~~~~~s~~~~~~~~N~~~~~~i~~~~~l~~~i~~----vp---~~~~~f~~~~l~~~~w~ 1018 (1051)
||...-+-++...+|..+...++.++.+++...+|.||-+.+-..+.-+..++- +. --+..|+....+..-|+
T Consensus 1230 aQkl~aa~iilH~ifiqIThih~tkpl~~ks~LsnLWwa~~i~~lLl~a~V~taldlQi~thrd~~VHfgldd~pLL~~~ 1309 (1354)
T KOG4383|consen 1230 AQKLLAAEIILHIIFIQITHIHCTKPLSFKSGLSNLWWAFPIKCLLLDAAVITALDLQIGTHRDRGVHFGLDDFPLLPLG 1309 (1354)
T ss_pred HHHHHHHHHHHHhheeEEEEEEEecchhhhcccchheeecccceeehhhHHHHHHhhhhhhccccceeeccccchhHHHH
Confidence 677777777888888899999999999888889998887654333222222211 10 01234666777777899
Q ss_pred HHHHHHHHHHHHHHHHHHH-hhccccchhhhc
Q 001568 1019 LVILVSAPVILIDEVLKFV-GRNRRLSGKKEK 1049 (1051)
Q Consensus 1019 ~~l~~~~~~l~i~e~~K~~-~R~~~~~~~~~~ 1049 (1051)
+..++..++.+.+|++|.. +|.+-|.|||.|
T Consensus 1310 igcisi~iiVitNEiiKiheIR~~~R~QkRqK 1341 (1354)
T KOG4383|consen 1310 IGCISICIIVITNEIIKIHEIRQFTREQKRQK 1341 (1354)
T ss_pred HHHHheeeeeehhhHHHHHHHHHHHHHHHhhh
Confidence 8888888888999999986 566667777665
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=222.70 Aligned_cols=181 Identities=36% Similarity=0.624 Sum_probs=147.9
Q ss_pred CCchhHHHHHHHHHHHhhhhhhhccCCCCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 001568 810 PECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMG 889 (1051)
Q Consensus 810 ~~~~~~~~~l~~n~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 889 (1051)
|.|+++.|+||+|+++|++|+++++.||+|+++|+|||+++++++++++.+.+++..|+++++++++.|++..... |
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~---~ 77 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIF---G 77 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHST---C
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcc---c
Confidence 6799999999999999999999999999999999999999999999999988888899998888776665443321 0
Q ss_pred ccccCCCCcccccccccccCccCCCCCccccccccCCCcccccCCCCccccccccchhHHHHHHHHHHHHHHhhhccccC
Q 001568 890 INLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMFNSLNALSED 969 (1051)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~t~~f~~lv~~q~~~~~~~~~~~ 969 (1051)
.+. .........++|++|++++++|+++.+++|+++
T Consensus 78 ~~~--------------------------------------------~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~ 113 (182)
T PF00689_consen 78 WDE--------------------------------------------ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRR 113 (182)
T ss_dssp SSS--------------------------------------------HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSS
T ss_pred ccc--------------------------------------------ccchhHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 000 000011346899999999999999999999999
Q ss_pred CCccc-cCCCCChHHHHHHHHHHHHHHHHHhccccccccccccCChhhHHHHHHHHHHHHHHHHHHHHH
Q 001568 970 NSLVT-MPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLVILVSAPVILIDEVLKFV 1037 (1051)
Q Consensus 970 ~s~~~-~~~~~N~~~~~~i~~~~~l~~~i~~vp~~~~~f~~~~l~~~~w~~~l~~~~~~l~i~e~~K~~ 1037 (1051)
.+.++ .++++|++++.+++++++++++++|+|+++.+|++.++++.+|+++++++++.++++|++|++
T Consensus 114 ~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 114 RSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp STCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99998 788899999999999999999999999999999999999999999999999999999999985
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-21 Score=206.48 Aligned_cols=97 Identities=49% Similarity=0.813 Sum_probs=92.4
Q ss_pred CeEEEEEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHH
Q 001568 613 DLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEA 692 (1051)
Q Consensus 613 ~l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 692 (1051)
+..++|.+.+.|++|++++++|+.|+++|++++|+|||+..++.++++++||.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~--------------------------- 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF--------------------------- 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---------------------------
Confidence 67899999999999999999999999999999999999999999999999994
Q ss_pred HHhcCCeEEEEe--CchhH--HHHHHHHhhcCCEEEEEcCCccCHHHHHhCC
Q 001568 693 LSKHGGKVFSRA--EPRHK--QEIVRMLKEMGEVVAMTGDGVNDAPALKLAD 740 (1051)
Q Consensus 693 ~~~~~~~v~~r~--~p~~K--~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Ad 740 (1051)
...+|+++ +|++| .++++.+|.+++.|+|+|||.||++|+++||
T Consensus 168 ----~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 168 ----DSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp ----SEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ----cccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 46799999 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.4e-13 Score=122.45 Aligned_cols=126 Identities=25% Similarity=0.350 Sum_probs=108.9
Q ss_pred eEEEEEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHH
Q 001568 614 LVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEAL 693 (1051)
Q Consensus 614 l~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~ 693 (1051)
+...+.++---++-++++++|++|++. +++++.|||..-+....|+-.|+.
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~---------------------------- 69 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIP---------------------------- 69 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCc----------------------------
Confidence 345677777788899999999999999 999999999999999999999986
Q ss_pred HhcCCeEEEEeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCC--CccHHHHhccCeeecCCCchHHHH
Q 001568 694 SKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGI--TGTEVAKEASDMVLADDNFGSIVS 771 (1051)
Q Consensus 694 ~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~g~--~~~~~a~~~ad~~l~~~~~~~i~~ 771 (1051)
-..+|+...|+.|.++++.|++.++.|.|+|||+||.+||++||+||..-. ...+-+.++||+++.+ ...+++
T Consensus 70 ---~~rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ld 144 (152)
T COG4087 70 ---VERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILD 144 (152)
T ss_pred ---eeeeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHH
Confidence 356899999999999999999999999999999999999999999986531 2234467899999976 666666
Q ss_pred HH
Q 001568 772 AV 773 (1051)
Q Consensus 772 ~i 773 (1051)
+.
T Consensus 145 l~ 146 (152)
T COG4087 145 LL 146 (152)
T ss_pred Hh
Confidence 54
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.3e-14 Score=124.43 Aligned_cols=89 Identities=39% Similarity=0.513 Sum_probs=70.2
Q ss_pred hhhccCccccCCC--cccccCCchHHHHHHHHHHcCCCCCCCCcccchhhhhhhhcccccccccccccccccccceeEee
Q 001568 428 AVCNDAGVYCDGP--LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATL 505 (1051)
Q Consensus 428 ~~c~~~~~~~~~~--~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 505 (1051)
++||++.+..+.+ .....|+|+|.||+.+++++|..... ......+++++.+
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~~--------------------------~~~~~~~~~~~~~ 54 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGIDI--------------------------KEIRSKYKIVAEI 54 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCcH--------------------------HHHHhhcceeEEE
Confidence 4799988755332 23388999999999999998754321 1235688999999
Q ss_pred cCCCCCceEEEEEecCCCcEEEEEcCChhHHHhhcccc
Q 001568 506 EFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHV 543 (1051)
Q Consensus 506 ~F~s~rk~msviv~~~~~~~~~~~KGa~e~i~~~c~~~ 543 (1051)
||+|+||||+|+++ .++...+|+|||||.|+++|+++
T Consensus 55 pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 55 PFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred ccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCCC
Confidence 99999999999998 33457779999999999999863
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.2e-13 Score=115.73 Aligned_cols=69 Identities=45% Similarity=0.733 Sum_probs=66.2
Q ss_pred cccCCHHHHHHHcCCCCCCCCCHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhhHHHHHHHHHHHHH
Q 001568 8 AWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFIS 76 (1051)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~ils 76 (1051)
||.+++++++++|+|+...||+++||++|+++||+|+++.++++++|+.++++|.+++++++++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 899999999999999999999999999999999999999999999999999999999999999999876
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.3e-10 Score=96.01 Aligned_cols=62 Identities=42% Similarity=0.575 Sum_probs=57.8
Q ss_pred HcCCCCCCCCCHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 001568 19 EYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILA 80 (1051)
Q Consensus 19 ~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~ils~~~~ 80 (1051)
.|++++++||+++|+++|+++||+|+++.++++++|+.++++|.+++.++++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 47888888999999999999999999999888899999999999999999999999998763
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.91 E-value=7.6e-09 Score=106.80 Aligned_cols=130 Identities=16% Similarity=0.133 Sum_probs=97.9
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCc-hHHhcCCHHHHHHHHHhcCCeEEEE
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTG-KEFMALSSTQQIEALSKHGGKVFSR 703 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g-~~~~~l~~~~~~~~~~~~~~~v~~r 703 (1051)
++.|++.+.|+.+++.| ++.++||-....+..+++++|+...-.. ...+.+ ..+ . .. . .
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an--~l~~~~~g~~------------t--G~-~--~ 127 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCH--KLEIDDSDRV------------V--GY-Q--L 127 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhce--eeEEecCCee------------E--Ce-e--e
Confidence 57999999999999975 9999999999999999999999631100 000000 000 0 00 0 1
Q ss_pred eCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHHH
Q 001568 704 AEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEG 776 (1051)
Q Consensus 704 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~g 776 (1051)
..++.|...++.+++.|..+.++|||.||.+|++.||+||++. +++..+++||=.-.-.+...+..++.++
T Consensus 128 ~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 128 RQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred cCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 3578899999999888888999999999999999999999995 7777666666554445688888877654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=2e-08 Score=107.22 Aligned_cols=148 Identities=25% Similarity=0.248 Sum_probs=103.6
Q ss_pred CChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCcccc-ccC---ch-----HH---------------
Q 001568 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGR-SFT---GK-----EF--------------- 681 (1051)
Q Consensus 626 lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~-~~~---g~-----~~--------------- 681 (1051)
+.+.+.++|++|++.|+++++.||++...+..+++.+|+..+--...+. +.. ++ .+
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 7789999999999999999999999999999999999985321000000 000 00 00
Q ss_pred ------h---------------cCCHHHHHHHHHhcCC--e-----EEEEeCch--hHHHHHHHHhhc----CCEEEEEc
Q 001568 682 ------M---------------ALSSTQQIEALSKHGG--K-----VFSRAEPR--HKQEIVRMLKEM----GEVVAMTG 727 (1051)
Q Consensus 682 ------~---------------~l~~~~~~~~~~~~~~--~-----v~~r~~p~--~K~~iv~~l~~~----g~~v~~iG 727 (1051)
. ....++..+.+..... . .+....|. .|..-++.+.++ ...++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~G 180 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIG 180 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEC
Confidence 0 0001112222221111 1 12244443 388888877654 35799999
Q ss_pred CCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHH
Q 001568 728 DGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVA 774 (1051)
Q Consensus 728 Dg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~ 774 (1051)
|+.||.+|++.|++|+||| ++.+.+|+.||++..+++-.++.++|+
T Consensus 181 D~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 181 DSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 9999999999999999999 999999999999999889999998874
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.7e-08 Score=111.30 Aligned_cols=129 Identities=18% Similarity=0.326 Sum_probs=99.3
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCC-C--ccccccCchHHhcCCHHHHHHHHHhcCCeEE
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNE-D--LTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~-~--~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~ 701 (1051)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+..... . +....++|... .
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~---------------g---- 241 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVL---------------G---- 241 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEec---------------C----
Confidence 589999999999999999999999999888889999999853100 0 00000011000 0
Q ss_pred EEeCchhHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHH
Q 001568 702 SRAEPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVA 774 (1051)
Q Consensus 702 ~r~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~ 774 (1051)
.-+..+.|.+.++.+.++ .+.++++|||.||.+|++.|++|||| ++.+..++.||.++...++.+++.++.
T Consensus 242 ~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 242 DIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 012346788888887654 36899999999999999999999999 788999999999999989998887763
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=3e-08 Score=108.66 Aligned_cols=67 Identities=30% Similarity=0.354 Sum_probs=59.4
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHH
Q 001568 707 RHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVA 774 (1051)
Q Consensus 707 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~ 774 (1051)
..|..-++.+.++ .+.|+++|||.||.+||+.|++|+||| ++.+.+|+.||+++.+++-.++.++|+
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 4677777777654 357999999999999999999999999 999999999999999989999998885
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.80 E-value=4.3e-08 Score=106.95 Aligned_cols=149 Identities=27% Similarity=0.342 Sum_probs=105.7
Q ss_pred CChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCC------------cccccc-----------------
Q 001568 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNED------------LTGRSF----------------- 676 (1051)
Q Consensus 626 lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~------------~~~~~~----------------- 676 (1051)
+.+.+.++|+++++.|+++++.||++...+..+.+++|+....-. +....+
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 889999999999999999999999999999999999999752100 000000
Q ss_pred ------Cc--------------------------hHHhcCC----------H---HHHHHHHHh-c--CCeEEEEeC---
Q 001568 677 ------TG--------------------------KEFMALS----------S---TQQIEALSK-H--GGKVFSRAE--- 705 (1051)
Q Consensus 677 ------~g--------------------------~~~~~l~----------~---~~~~~~~~~-~--~~~v~~r~~--- 705 (1051)
.. ....... . ++..+.+.+ . ....+.+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 00 0000000 0 111111111 1 122333332
Q ss_pred ----c--hhHHHHHHHHhhc-CC---EEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHHH
Q 001568 706 ----P--RHKQEIVRMLKEM-GE---VVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAE 775 (1051)
Q Consensus 706 ----p--~~K~~iv~~l~~~-g~---~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~~ 775 (1051)
| .+|..-++.+.+. |- .|+++||+.||.+||+.|+.||||| ++.+.+++.||++...++-.++.+++++
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 2 4788888887764 43 5999999999999999999999999 8999999999999899999999998864
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.9e-08 Score=104.55 Aligned_cols=147 Identities=22% Similarity=0.216 Sum_probs=101.4
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccc--------cc-cC--c-hHHh----------
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTG--------RS-FT--G-KEFM---------- 682 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~--------~~-~~--g-~~~~---------- 682 (1051)
++.+++.++|++|++.|+++++.||++...+..+++.+++..+.-...+ .+ .. . ..+.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4888999999999999999999999999999999999998632100000 00 00 0 0000
Q ss_pred -----cC------------CHHHHHHHHHhcCCeE-----EEEeC--chhHHHHHHHHhhc----CCEEEEEcCCccCHH
Q 001568 683 -----AL------------SSTQQIEALSKHGGKV-----FSRAE--PRHKQEIVRMLKEM----GEVVAMTGDGVNDAP 734 (1051)
Q Consensus 683 -----~l------------~~~~~~~~~~~~~~~v-----~~r~~--p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~ 734 (1051)
.. ..+...+.+......+ +...+ ...|...++.+.+. ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 00 0011122222211111 12333 35888888887664 346999999999999
Q ss_pred HHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHH
Q 001568 735 ALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSA 772 (1051)
Q Consensus 735 ~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~ 772 (1051)
|++.|++|+||+ ++.+.+++.||++..+++-.++.++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 999999999999 9999999999999987777777654
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=5e-08 Score=106.59 Aligned_cols=66 Identities=21% Similarity=0.268 Sum_probs=57.3
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccC--eeecCCCchHHHHHHH
Q 001568 708 HKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASD--MVLADDNFGSIVSAVA 774 (1051)
Q Consensus 708 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad--~~l~~~~~~~i~~~i~ 774 (1051)
.|..-++.+.+. .+.|+++|||.||.+||+.|+.|+||| ++.+.+|+.|| .++.+++-.++.++|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 588777777654 357999999999999999999999999 99999999987 7777888889988874
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=7.1e-08 Score=105.69 Aligned_cols=149 Identities=15% Similarity=0.118 Sum_probs=102.6
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCC------------C-cccccc---------------
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNE------------D-LTGRSF--------------- 676 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~------------~-~~~~~~--------------- 676 (1051)
.+.+.+.++|++|++.|+++++.||++...+..+.+++|+...-- . +....+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 488999999999999999999999999999999999999853200 0 000000
Q ss_pred -------C---------chHH----------------hcC------------CHHH---HHHHHHh-cC--CeE------
Q 001568 677 -------T---------GKEF----------------MAL------------SSTQ---QIEALSK-HG--GKV------ 700 (1051)
Q Consensus 677 -------~---------g~~~----------------~~l------------~~~~---~~~~~~~-~~--~~v------ 700 (1051)
+ .... ..+ ..+. +.+.+.. .. ..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 0 0000 000 0011 1111111 01 111
Q ss_pred EEEeCch--hHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCe--eecCCCchHHHHH
Q 001568 701 FSRAEPR--HKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDM--VLADDNFGSIVSA 772 (1051)
Q Consensus 701 ~~r~~p~--~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~--~l~~~~~~~i~~~ 772 (1051)
+...+|. .|..-++.+.+. ...|+++|||.||.+||+.|+.||||| ++.+.+|+.||. ++.+++-.++.++
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~ 257 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHY 257 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHH
Confidence 2234443 588888888665 357999999999999999999999999 999999999996 6777888899888
Q ss_pred HH
Q 001568 773 VA 774 (1051)
Q Consensus 773 i~ 774 (1051)
|+
T Consensus 258 l~ 259 (272)
T PRK15126 258 LT 259 (272)
T ss_pred HH
Confidence 74
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.73 E-value=7.6e-08 Score=102.32 Aligned_cols=148 Identities=22% Similarity=0.205 Sum_probs=101.0
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccc--------------cccCchHH---------
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTG--------------RSFTGKEF--------- 681 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~--------------~~~~g~~~--------- 681 (1051)
.+.+.+.++|++++++|+++++.||++...+..+.+.+|+....-...+ ..+.....
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4778899999999999999999999999999999999996432100000 00000000
Q ss_pred --h-------------c----CCHHHHHHHHHhcCCe-------EEEEeCc--hhHHHHHHHHhhc----CCEEEEEcCC
Q 001568 682 --M-------------A----LSSTQQIEALSKHGGK-------VFSRAEP--RHKQEIVRMLKEM----GEVVAMTGDG 729 (1051)
Q Consensus 682 --~-------------~----l~~~~~~~~~~~~~~~-------v~~r~~p--~~K~~iv~~l~~~----g~~v~~iGDg 729 (1051)
. . ...+.....+...... .+....| ..|...++.+.++ ...|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 0 0011111122211111 1223334 4788888877654 3579999999
Q ss_pred ccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchH----HHHHH
Q 001568 730 VNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGS----IVSAV 773 (1051)
Q Consensus 730 ~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~----i~~~i 773 (1051)
.||.+|++.|++|+||+ ++.+..++.||++..+++-.+ +...+
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l 221 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEIL 221 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHH
Confidence 99999999999999999 999999999999998888888 66555
|
catalyze the same reaction as SPP. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.8e-07 Score=110.56 Aligned_cols=66 Identities=30% Similarity=0.466 Sum_probs=57.1
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHH
Q 001568 708 HKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVA 774 (1051)
Q Consensus 708 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~ 774 (1051)
.|..-++.+.+. .+.|+++|||.||.+||+.|+.||||| ++.+.+|+.||+|..+++-.++.++|+
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 466666655544 247999999999999999999999999 999999999999999999999998885
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.2e-07 Score=100.39 Aligned_cols=125 Identities=22% Similarity=0.357 Sum_probs=94.1
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEE-
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r- 703 (1051)
++++++.+.++.|++.|+++.++||.....+..+.+.+|+...... ..... ...+...
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~---~~~~~------------------~~~~~~~~ 143 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFAN---RLEVE------------------DGKLTGLV 143 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEee---EEEEE------------------CCEEEEEe
Confidence 5899999999999999999999999999999999999998541100 00000 0001111
Q ss_pred ----eCchhHHHHHHHHhhc-C---CEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHH
Q 001568 704 ----AEPRHKQEIVRMLKEM-G---EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSA 772 (1051)
Q Consensus 704 ----~~p~~K~~iv~~l~~~-g---~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~ 772 (1051)
..+..|..+++.+.++ + +.++++||+.+|.+|++.|+++++++ +.+..+++||+++.++++..+..+
T Consensus 144 ~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 144 EGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 1233477777765544 2 46899999999999999999999885 678888999999999998887754
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.3e-07 Score=94.00 Aligned_cols=103 Identities=17% Similarity=0.219 Sum_probs=80.9
Q ss_pred HHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe--CchhH
Q 001568 632 KAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA--EPRHK 709 (1051)
Q Consensus 632 ~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~--~p~~K 709 (1051)
..|+.|+++|+++.++|+.+...+..+.+.+|+.. .|... .|+.-
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~---------------------------------~f~~~kpkp~~~ 87 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR---------------------------------FHEGIKKKTEPY 87 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------EEecCCCCHHHH
Confidence 57999999999999999999999999999999953 12111 12333
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchH
Q 001568 710 QEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGS 768 (1051)
Q Consensus 710 ~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~ 768 (1051)
..+++.++-....++++||+.||.+|++.|++++||+ ++.+..+..|++++..++-.+
T Consensus 88 ~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g 145 (169)
T TIGR02726 88 AQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHG 145 (169)
T ss_pred HHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCC
Confidence 3333444333467999999999999999999999999 999999999999987555433
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.9e-07 Score=99.65 Aligned_cols=149 Identities=22% Similarity=0.265 Sum_probs=102.2
Q ss_pred CCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCC-----CCc--------ccccc--------------
Q 001568 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGN-----EDL--------TGRSF-------------- 676 (1051)
Q Consensus 624 d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~-----~~~--------~~~~~-------------- 676 (1051)
..+.+++.++|++|+++|+++++.||+....+..+.+++++..+. ..+ ....+
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 347799999999999999999999999999999999999986210 000 00000
Q ss_pred ----------------Cc---hHH-------------------h-----c----CCHHHHH---HHHHh-c-CCeEEEE-
Q 001568 677 ----------------TG---KEF-------------------M-----A----LSSTQQI---EALSK-H-GGKVFSR- 703 (1051)
Q Consensus 677 ----------------~g---~~~-------------------~-----~----l~~~~~~---~~~~~-~-~~~v~~r- 703 (1051)
.. ... . + ...+... +.+.+ . ....+.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 00 000 0 0 0011111 11111 1 1112222
Q ss_pred ------eCc--hhHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHH
Q 001568 704 ------AEP--RHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVS 771 (1051)
Q Consensus 704 ------~~p--~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~ 771 (1051)
.+| ..|...++.+.+. .+.++++||+.||.+||+.|+.|+||+ ++.+..+..||+++...+-.++.+
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHH
Confidence 333 5798888888753 468999999999999999999999999 999999999999999887788877
Q ss_pred HH
Q 001568 772 AV 773 (1051)
Q Consensus 772 ~i 773 (1051)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 64
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.4e-07 Score=93.19 Aligned_cols=97 Identities=24% Similarity=0.296 Sum_probs=79.1
Q ss_pred HHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCchhHHHH
Q 001568 633 AIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEI 712 (1051)
Q Consensus 633 ~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p~~K~~i 712 (1051)
+|+.|++.|+++.++||++...+..+.+++|+... |.. ...|.+.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~---------------------------------~~~--~~~k~~~ 80 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL---------------------------------YQG--QSNKLIA 80 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE---------------------------------Eec--ccchHHH
Confidence 89999999999999999999999999999998531 111 1335555
Q ss_pred HHHHhh----cCCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCC
Q 001568 713 VRMLKE----MGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDN 765 (1051)
Q Consensus 713 v~~l~~----~g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~ 765 (1051)
++.+.+ ..+.++++||+.||.+|++.|+++++|. .+.+..+..+++++..+.
T Consensus 81 ~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 81 FSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCC
Confidence 554433 3467999999999999999999999998 778888999999998664
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=2.6e-07 Score=101.42 Aligned_cols=67 Identities=31% Similarity=0.452 Sum_probs=57.4
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHHHH
Q 001568 707 RHKQEIVRMLKEM-G---EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVA 774 (1051)
Q Consensus 707 ~~K~~iv~~l~~~-g---~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i~ 774 (1051)
..|...++.+.++ | +.|+++||+.||.+|++.|++|+||| ++.+..++.||+++.+++-.++.++|+
T Consensus 198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 3577777665443 3 57999999999999999999999999 888888999999999999999998885
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.7e-07 Score=97.23 Aligned_cols=118 Identities=20% Similarity=0.257 Sum_probs=88.4
Q ss_pred CCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCc---cccccCchHHhcCCHHHHHHHHHhcCCeE
Q 001568 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDL---TGRSFTGKEFMALSSTQQIEALSKHGGKV 700 (1051)
Q Consensus 624 d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~---~~~~~~g~~~~~l~~~~~~~~~~~~~~~v 700 (1051)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+...-... ...+++ ...+
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~lt-------------------G~v~ 136 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLT-------------------GRVV 136 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEe-------------------ceee
Confidence 679999999999999999999999999999999999999997531110 000111 1223
Q ss_pred EEEeCchhHHHHHHHHhh-cCC---EEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeec
Q 001568 701 FSRAEPRHKQEIVRMLKE-MGE---VVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLA 762 (1051)
Q Consensus 701 ~~r~~p~~K~~iv~~l~~-~g~---~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~ 762 (1051)
...+..+.|.+.++.+.+ .|. .+.++|||.||.|||+.|+.+++++ +.+..+..|+....
T Consensus 137 g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 137 GPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred eeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 334566889988866655 344 5999999999999999999999985 55555555555544
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.1e-06 Score=95.23 Aligned_cols=149 Identities=19% Similarity=0.173 Sum_probs=96.3
Q ss_pred CChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCC-------------C------ccccccCchHHhcCC-
Q 001568 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNE-------------D------LTGRSFTGKEFMALS- 685 (1051)
Q Consensus 626 lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~-------------~------~~~~~~~g~~~~~l~- 685 (1051)
..+.+.++|+.|+++|+++++.||+....+..+.+++|+....- . +....++.+....+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 34568999999999999999999999999999999999853210 0 000001110000000
Q ss_pred -----------------------------------------------HH---HHHHHHHhcCCeE-----EEEeCc--hh
Q 001568 686 -----------------------------------------------ST---QQIEALSKHGGKV-----FSRAEP--RH 708 (1051)
Q Consensus 686 -----------------------------------------------~~---~~~~~~~~~~~~v-----~~r~~p--~~ 708 (1051)
.+ ...+.+.+....+ +....| ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 00 0011111111111 112222 46
Q ss_pred HHHHHHHHhhc------CCEEEEEcCCccCHHHHHhCCeeEEeCCCcc---HHHHhc--c-CeeecCCCchHHHHHHHH
Q 001568 709 KQEIVRMLKEM------GEVVAMTGDGVNDAPALKLADIGVAMGITGT---EVAKEA--S-DMVLADDNFGSIVSAVAE 775 (1051)
Q Consensus 709 K~~iv~~l~~~------g~~v~~iGDg~ND~~~l~~Advgia~g~~~~---~~a~~~--a-d~~l~~~~~~~i~~~i~~ 775 (1051)
|...++.+.+. .+.|+++||+.||.+|++.|+.||||+ ++. +..++. | +++..+++-.++.+++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 76666666443 457999999999999999999999999 776 357775 4 588888899999988753
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.5e-06 Score=94.36 Aligned_cols=65 Identities=35% Similarity=0.393 Sum_probs=56.7
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCCchHHHHH
Q 001568 707 RHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSA 772 (1051)
Q Consensus 707 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~ 772 (1051)
..|..-++.+.+. .+.++++||+.||.+|++.|+.|+||+ ++.+..+..||+++.+++-.++.++
T Consensus 187 ~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 187 VSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred CChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhh
Confidence 3688888888765 357999999999999999999999999 8899999999999988887777654
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.7e-06 Score=94.49 Aligned_cols=148 Identities=16% Similarity=0.122 Sum_probs=95.7
Q ss_pred CChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCC-C-----CCCc--------------cccccCchHHhc--
Q 001568 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS-G-----NEDL--------------TGRSFTGKEFMA-- 683 (1051)
Q Consensus 626 lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~-~-----~~~~--------------~~~~~~g~~~~~-- 683 (1051)
+-+.+.++|++|+++|+++++.||+....+..+++++|+.. + +..+ ....++.+.+..
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 45778999999999999999999999999999999999842 1 0000 000011000000
Q ss_pred -------------------------------------C-----------CHHH---HHHHHHhcCCeE-----EEEeCc-
Q 001568 684 -------------------------------------L-----------SSTQ---QIEALSKHGGKV-----FSRAEP- 706 (1051)
Q Consensus 684 -------------------------------------l-----------~~~~---~~~~~~~~~~~v-----~~r~~p- 706 (1051)
. ..+. +.+.+......+ +-..+|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~ 184 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLDA 184 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEecC
Confidence 0 0000 011111111111 223344
Q ss_pred -hhHHHHHHHHhh-------cCCEEEEEcCCccCHHHHHhCCeeEEeCCCcc-HH-----HHhccCeeecCCCchHHHHH
Q 001568 707 -RHKQEIVRMLKE-------MGEVVAMTGDGVNDAPALKLADIGVAMGITGT-EV-----AKEASDMVLADDNFGSIVSA 772 (1051)
Q Consensus 707 -~~K~~iv~~l~~-------~g~~v~~iGDg~ND~~~l~~Advgia~g~~~~-~~-----a~~~ad~~l~~~~~~~i~~~ 772 (1051)
..|..-++.+.+ ....|+++|||.||.+||+.|++||||| ++. +. .+..+|+++...+-.++.++
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~ 263 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPEGWREG 263 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcHHHHHH
Confidence 467776666644 3467999999999999999999999999 444 32 34478999999888899888
Q ss_pred HH
Q 001568 773 VA 774 (1051)
Q Consensus 773 i~ 774 (1051)
++
T Consensus 264 l~ 265 (271)
T PRK03669 264 LD 265 (271)
T ss_pred HH
Confidence 75
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=9.3e-07 Score=90.13 Aligned_cols=110 Identities=20% Similarity=0.237 Sum_probs=83.9
Q ss_pred HHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCchhHHH
Q 001568 632 KAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQE 711 (1051)
Q Consensus 632 ~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p~~K~~ 711 (1051)
.+|+.|++.|+++.++||.....+..+++++|+.. +|. ..+.|..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~---------------------------------~f~--g~~~k~~ 99 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH---------------------------------LYQ--GQSNKLI 99 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------eec--CCCcHHH
Confidence 58999999999999999999999999999999853 121 2234555
Q ss_pred HHHHHh-hc---CCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCC----chHHHHHHHHHH
Q 001568 712 IVRMLK-EM---GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDN----FGSIVSAVAEGR 777 (1051)
Q Consensus 712 iv~~l~-~~---g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~----~~~i~~~i~~gR 777 (1051)
.++.+. +. ...|+|+||+.||.+|++.|+++++++ ++.+..+..+|+++.... ...+.+.+.+.|
T Consensus 100 ~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 100 AFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred HHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 555443 33 357999999999999999999999987 777788888999986433 445555443333
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.36 E-value=5.5e-07 Score=86.89 Aligned_cols=108 Identities=21% Similarity=0.311 Sum_probs=77.1
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCcccccc--CchHHhcCCHHHHHHHHHhcCCeEEE
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSF--TGKEFMALSSTQQIEALSKHGGKVFS 702 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~--~g~~~~~l~~~~~~~~~~~~~~~v~~ 702 (1051)
.+-|++++.++.|++.|.+++++||--..-+..+|.++||+..+-.-+.... +|+-..-- .. -.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd------------~~--~p 153 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFD------------TN--EP 153 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccc------------cC--Cc
Confidence 3679999999999999999999999999999999999999753211000000 00000000 00 00
Q ss_pred EeCchhHHHHHHHHhhc--CCEEEEEcCCccCHHHHHhCCeeEEeC
Q 001568 703 RAEPRHKQEIVRMLKEM--GEVVAMTGDGVNDAPALKLADIGVAMG 746 (1051)
Q Consensus 703 r~~p~~K~~iv~~l~~~--g~~v~~iGDg~ND~~~l~~Advgia~g 746 (1051)
-+....|.++++.++++ -+.++|||||+||.+|+..||.=|+.|
T Consensus 154 tsdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 154 TSDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 12235799999999885 458899999999999999988777655
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.3e-06 Score=89.46 Aligned_cols=126 Identities=21% Similarity=0.296 Sum_probs=90.2
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEE--
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS-- 702 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~-- 702 (1051)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+...-.. .....+ ...+..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~--~~~~~~------------------~~~i~~~~ 126 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCH--SLEVDE------------------DGMITGYD 126 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcc--eEEECC------------------CCeEECcc
Confidence 4689999999999999 99999999999999999999998531100 000000 000100
Q ss_pred EeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCe-eecCCCchHHHHHHH
Q 001568 703 RAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDM-VLADDNFGSIVSAVA 774 (1051)
Q Consensus 703 r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~-~l~~~~~~~i~~~i~ 774 (1051)
-..|+.|...++.++..+..++|+|||.||.+|.+.|++|++.+ .+.+.....++. ++. ++..+...+.
T Consensus 127 ~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l~ 196 (205)
T PRK13582 127 LRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVH--TYDELLAAID 196 (205)
T ss_pred ccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccC--CHHHHHHHHH
Confidence 12477888999999888899999999999999999999999886 333333444555 443 3676666553
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.31 E-value=7.9e-06 Score=89.44 Aligned_cols=66 Identities=26% Similarity=0.278 Sum_probs=53.9
Q ss_pred hHHHHHHHHhhc----C-CEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHH----hcc-Ceee--cCCCchHHHHHHH
Q 001568 708 HKQEIVRMLKEM----G-EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAK----EAS-DMVL--ADDNFGSIVSAVA 774 (1051)
Q Consensus 708 ~K~~iv~~l~~~----g-~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~----~~a-d~~l--~~~~~~~i~~~i~ 774 (1051)
.|...++.+.+. . +.|+++||+.||.+|++.|++|+||+ ++.+..+ .+| +.+. ..++-.++.++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 677777666543 5 89999999999999999999999999 9998888 666 6777 4556778887774
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.24 E-value=5.3e-06 Score=86.39 Aligned_cols=117 Identities=19% Similarity=0.197 Sum_probs=81.3
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++++++.+.++.|++.|+++.++|+-....+..+++.+|+..... ..+... +-... ....+..+
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~---~~~~~~-~~g~~------------~p~~~~~~ 143 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYS---NELVFD-EKGFI------------QPDGIVRV 143 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEE---EEEEEc-CCCeE------------ecceeeEE
Confidence 589999999999999999999999999999999999999743100 000000 00000 01112234
Q ss_pred CchhHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccC
Q 001568 705 EPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASD 758 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad 758 (1051)
.|..|.+.++.+.++ .+.++++||+.||.+|++.|+++++++ .+....+.++|
T Consensus 144 ~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 144 TFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred ccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 566787777766543 346999999999999999999999997 33333444444
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.00043 Score=80.82 Aligned_cols=94 Identities=19% Similarity=0.272 Sum_probs=71.7
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
|+++++.+.++++++.|++++++|+-+...+..+++.+|+.+. ++..++ ..++
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-------Vigsd~--------------------~~~~ 124 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-------VFASDG--------------------TTNL 124 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-------EEeCCC--------------------cccc
Confidence 4789999999999999999999999999999999999998321 111110 0135
Q ss_pred CchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeC
Q 001568 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~g 746 (1051)
.|+.|.+.++..... +.+.++||+.+|.++++.|+-+++++
T Consensus 125 kg~~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn 165 (479)
T PRK08238 125 KGAAKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVG 165 (479)
T ss_pred CCchHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEEC
Confidence 677776655432211 22678899999999999999999997
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.6e-05 Score=83.53 Aligned_cols=136 Identities=17% Similarity=0.104 Sum_probs=86.8
Q ss_pred CCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEE--
Q 001568 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF-- 701 (1051)
Q Consensus 624 d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~-- 701 (1051)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++....... .....++..+.... .....+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~-n~~~~~~~~~~~~~----------p~~~~~~~ 137 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYC-NEADFSNEYIHIDW----------PHPCDGTC 137 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEe-ceeEeeCCeeEEeC----------CCCCcccc
Confidence 36899999999999999999999999999999998888754221000 00111121111000 000000
Q ss_pred -EEeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHh--ccCeeecCCCchHHHHHHH
Q 001568 702 -SRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKE--ASDMVLADDNFGSIVSAVA 774 (1051)
Q Consensus 702 -~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~--~ad~~l~~~~~~~i~~~i~ 774 (1051)
..| ...|..+++.++.....++|+|||.||.+|++.||+.+|=+ .-.+-.++ .+.+.+ ++|..+...++
T Consensus 138 ~~~c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 138 QNQC-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred ccCC-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 011 34699999998888888999999999999999999988644 21121111 122222 35777777663
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.13 E-value=5.8e-06 Score=77.46 Aligned_cols=116 Identities=19% Similarity=0.303 Sum_probs=91.4
Q ss_pred HHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCchhHHH
Q 001568 632 KAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQE 711 (1051)
Q Consensus 632 ~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p~~K~~ 711 (1051)
..|+.|.++||++-++||++..-...-|+++||.. +| .--++|..
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~---------------------------------~~--qG~~dK~~ 86 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH---------------------------------LY--QGISDKLA 86 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------ee--echHhHHH
Confidence 47899999999999999999999999999999952 11 12346766
Q ss_pred HHHHHhhc----CCEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccCeeecCCC----chHHHHHHHHHHHHHHhH
Q 001568 712 IVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDN----FGSIVSAVAEGRSIYNNM 783 (1051)
Q Consensus 712 iv~~l~~~----g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad~~l~~~~----~~~i~~~i~~gR~~~~~i 783 (1051)
..+.+.++ -+.|+++||-.||.|+|+..++++|+. .+.+..++.||+++.... +..+.++|..++..++-.
T Consensus 87 a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~ 165 (170)
T COG1778 87 AFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEA 165 (170)
T ss_pred HHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHH
Confidence 66655443 457999999999999999999999998 888888999999988654 556666666666555443
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.09 E-value=2.9e-05 Score=82.43 Aligned_cols=127 Identities=20% Similarity=0.325 Sum_probs=84.4
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCcccc-ccCchHHhcCCHHHHHHHHHhcCCeEEEE
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGR-SFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~-~~~g~~~~~l~~~~~~~~~~~~~~~v~~r 703 (1051)
++.|++.+.++.|++.|+++.++||.....+..+.+.+|+.... ..... .... ...+...
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~-~~~~~~~~~~------------------~g~~~g~ 144 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPEN-IFANQILFGD------------------SGEYAGF 144 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhh-EEEeEEEEcC------------------CCcEECc
Confidence 37899999999999999999999999999999999999995310 00000 0000 0000000
Q ss_pred ------eCchhHHHHHHHHhhc--CCEEEEEcCCccCHHHHHh--CCeeEEeCCCc-cHHHHhccCeeecCCCchHHHHH
Q 001568 704 ------AEPRHKQEIVRMLKEM--GEVVAMTGDGVNDAPALKL--ADIGVAMGITG-TEVAKEASDMVLADDNFGSIVSA 772 (1051)
Q Consensus 704 ------~~p~~K~~iv~~l~~~--g~~v~~iGDg~ND~~~l~~--Advgia~g~~~-~~~a~~~ad~~l~~~~~~~i~~~ 772 (1051)
+....|.+.++.+.++ .+.++++||+.||..|.+. ++++++.|... .+.....+|+++.+ +..+...
T Consensus 145 ~~~~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~~ 222 (224)
T PLN02954 145 DENEPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLIEV 222 (224)
T ss_pred cCCCcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHHHh
Confidence 1224577777776654 3579999999999999777 56666655221 23344568998865 6666543
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.08 E-value=1e-05 Score=83.49 Aligned_cols=92 Identities=25% Similarity=0.403 Sum_probs=70.8
Q ss_pred hhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCch
Q 001568 628 GGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPR 707 (1051)
Q Consensus 628 ~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p~ 707 (1051)
+++.+.|+.++++|++++++||+....+..+++.+|+.... ++ +.++..- .......+.+|.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~------v~-~~~~~~~-----------~~~~~~~~~~~~ 153 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN------VI-GNELFDN-----------GGGIFTGRITGS 153 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG------EE-EEEEECT-----------TCCEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE------EE-EEeeeec-----------ccceeeeeECCC
Confidence 78889999999999999999999999999999999996421 00 0000000 023456666665
Q ss_pred -h--HHHHHHHH------hhcCCEEEEEcCCccCHHHHH
Q 001568 708 -H--KQEIVRML------KEMGEVVAMTGDGVNDAPALK 737 (1051)
Q Consensus 708 -~--K~~iv~~l------~~~g~~v~~iGDg~ND~~~l~ 737 (1051)
+ |.+.++.+ +.....++++|||.||.+|||
T Consensus 154 ~~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 154 NCGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp EESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CCCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 4 99999999 445889999999999999986
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.96 E-value=4.3e-05 Score=80.67 Aligned_cols=106 Identities=19% Similarity=0.223 Sum_probs=73.5
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCcc--ccccCchHHhcCCHHHHHHHHHhcCCeEE-
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLT--GRSFTGKEFMALSSTQQIEALSKHGGKVF- 701 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~--~~~~~g~~~~~l~~~~~~~~~~~~~~~v~- 701 (1051)
+++|++.+.++.|++.|+++.++||-....+..+.+.+ +.. ..+. ....+++.+..-. ......
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~~~~~~~~~~~k----------p~p~~~~ 140 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGSDFSGEYITITW----------PHPCDEH 140 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEEEecCCeeEEec----------cCCcccc
Confidence 58999999999999999999999999999999999887 643 1110 0011121110000 000000
Q ss_pred --EEeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 001568 702 --SRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA 744 (1051)
Q Consensus 702 --~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia 744 (1051)
.++ ...|..+++.++.....+.++|||.||..|.+.||+.++
T Consensus 141 ~~~~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 141 CQNHC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred ccccC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 001 124888898888777889999999999999999999776
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.93 E-value=3.7e-05 Score=79.07 Aligned_cols=112 Identities=21% Similarity=0.185 Sum_probs=76.1
Q ss_pred CCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccc--cccCchHHhcCCHHHHHHHHHhcCCeEE
Q 001568 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTG--RSFTGKEFMALSSTQQIEALSKHGGKVF 701 (1051)
Q Consensus 624 d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~--~~~~g~~~~~l~~~~~~~~~~~~~~~v~ 701 (1051)
-++++++.+.++.|++.|+++.++|+.+......+.+..|+...-+.+.+ ...++....... .. +...+
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~-------~~--~~~~~ 141 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVW-------PH--HCHGC 141 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEe-------cC--CCCcc
Confidence 36899999999999999999999999999999999999988542111100 000000000000 00 00011
Q ss_pred EE-eCchhHHHHHHHHhhc-CCEEEEEcCCccCHHHHHhCCeeEE
Q 001568 702 SR-AEPRHKQEIVRMLKEM-GEVVAMTGDGVNDAPALKLADIGVA 744 (1051)
Q Consensus 702 ~r-~~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~l~~Advgia 744 (1051)
.. .....|.++++.++++ ...++++|||.||..|.++||+-.|
T Consensus 142 ~~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 142 CSCPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CcCCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 11 1123599999999887 8899999999999999999988664
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.87 E-value=9.7e-05 Score=77.95 Aligned_cols=127 Identities=20% Similarity=0.310 Sum_probs=90.6
Q ss_pred cCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEE
Q 001568 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS 702 (1051)
Q Consensus 623 ~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~ 702 (1051)
...+-++++++++.|+++|++..++|+.+...+..+.+..|+...-..+. .++.. -..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~----g~~~~------------------~~~ 144 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIV----GGDDV------------------PPP 144 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEE----cCCCC------------------CCC
Confidence 44678999999999999999999999999999999999999975421110 00000 000
Q ss_pred EeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCC---eeEEeCCC-ccHHHHhccCeeecCCCchHHHHHH
Q 001568 703 RAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLAD---IGVAMGIT-GTEVAKEASDMVLADDNFGSIVSAV 773 (1051)
Q Consensus 703 r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Ad---vgia~g~~-~~~~a~~~ad~~l~~~~~~~i~~~i 773 (1051)
.-.|......++.+....+.++||||..+|..|-++|+ ||+..|.+ ..+.....+|+++.+ +..+...+
T Consensus 145 KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l 217 (220)
T COG0546 145 KPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALL 217 (220)
T ss_pred CcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHH
Confidence 12334444444444444347999999999999999998 77888743 345667779999876 77766554
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00013 Score=78.63 Aligned_cols=150 Identities=19% Similarity=0.249 Sum_probs=96.6
Q ss_pred CCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCc--ccc-cc-Cc------------------hHH
Q 001568 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDL--TGR-SF-TG------------------KEF 681 (1051)
Q Consensus 624 d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~--~~~-~~-~g------------------~~~ 681 (1051)
.+..+...+.++++++.|+.+++.||+.....+.+.+++++..+.-.+ .+. +. .+ +.+
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 456789999999999999999999999999999999999876541000 000 00 00 000
Q ss_pred -------hcC-----------------CHHH----H---HHHHHhc--CCeE-EE-----EeCc--hhHHHHHHHHhhc-
Q 001568 682 -------MAL-----------------SSTQ----Q---IEALSKH--GGKV-FS-----RAEP--RHKQEIVRMLKEM- 719 (1051)
Q Consensus 682 -------~~l-----------------~~~~----~---~~~~~~~--~~~v-~~-----r~~p--~~K~~iv~~l~~~- 719 (1051)
..+ ..+. . .+.+... ...+ .+ ...| ..|...++.+.++
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 000 0011 1 1112111 1111 11 3344 5788888888664
Q ss_pred ---CCEEEEEcCCccCHHHHHh-CCeeEEeCCCccHHHHhccC-------eeecCCCchHHHHHHH
Q 001568 720 ---GEVVAMTGDGVNDAPALKL-ADIGVAMGITGTEVAKEASD-------MVLADDNFGSIVSAVA 774 (1051)
Q Consensus 720 ---g~~v~~iGDg~ND~~~l~~-Advgia~g~~~~~~a~~~ad-------~~l~~~~~~~i~~~i~ 774 (1051)
...|+++||+.||.+|++. ++.|++|+ ++.+..++.++ ++.....-.++.++++
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 4689999999999999998 67999999 88887775433 5555555677777664
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.82 E-value=8.2e-05 Score=77.51 Aligned_cols=105 Identities=13% Similarity=0.116 Sum_probs=76.7
Q ss_pred cCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCC-cc---ccccCchHHhcCCHHHHHHHHHhcCC
Q 001568 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNED-LT---GRSFTGKEFMALSSTQQIEALSKHGG 698 (1051)
Q Consensus 623 ~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~-~~---~~~~~g~~~~~l~~~~~~~~~~~~~~ 698 (1051)
..++++++.+.++.+++.|++++++||.....+..+++.+|+..--.. +. ....+|..
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~------------------ 146 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNI------------------ 146 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCc------------------
Confidence 446899999999999999999999999999999999999998531100 00 00011100
Q ss_pred eEEEEeCchhHHHHHHHHhh-cC---CEEEEEcCCccCHHHHHhCCeeEEeC
Q 001568 699 KVFSRAEPRHKQEIVRMLKE-MG---EVVAMTGDGVNDAPALKLADIGVAMG 746 (1051)
Q Consensus 699 ~v~~r~~p~~K~~iv~~l~~-~g---~~v~~iGDg~ND~~~l~~Advgia~g 746 (1051)
.-..+.++.|...++.+.+ .+ +.+.++||+.+|.+|++.|+.++++.
T Consensus 147 -~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 147 -DGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred -cCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 0012456778887776543 33 36899999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.79 E-value=4.3e-05 Score=77.70 Aligned_cols=96 Identities=26% Similarity=0.359 Sum_probs=69.5
Q ss_pred CChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCC-cc---ccccCchHHhcCCHHHHHHHHHhcCCeEE
Q 001568 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNED-LT---GRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (1051)
Q Consensus 626 lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~-~~---~~~~~g~~~~~l~~~~~~~~~~~~~~~v~ 701 (1051)
+++++.+.++.+++.|++++++||.....+..+++.+|+..-... +. ...++|.. ...
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~----------------~~~-- 135 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPI----------------EGQ-- 135 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCcc----------------CCc--
Confidence 689999999999999999999999999999999999998531000 00 00001100 000
Q ss_pred EEeCchhHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhC
Q 001568 702 SRAEPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLA 739 (1051)
Q Consensus 702 ~r~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A 739 (1051)
..+.+..|...++.+++. ...++++|||.||.+|++.|
T Consensus 136 ~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 136 VNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred ccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 124567899999887654 35699999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00011 Score=77.96 Aligned_cols=126 Identities=17% Similarity=0.235 Sum_probs=86.2
Q ss_pred CCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEE
Q 001568 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (1051)
Q Consensus 624 d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r 703 (1051)
.++.+++.+.++.|++.|+++.++||........+.+.+|+...-. .++.++.. .+
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~--------------------~~ 147 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFS----VVIGGDSL--------------------PN 147 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCcc----EEEcCCCC--------------------CC
Confidence 3578999999999999999999999999999999999999854211 11111100 01
Q ss_pred eC--chhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe-eEEeC--CC-ccHHHHhccCeeecCCCchHHHHHHHH
Q 001568 704 AE--PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI-GVAMG--IT-GTEVAKEASDMVLADDNFGSIVSAVAE 775 (1051)
Q Consensus 704 ~~--p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Adv-gia~g--~~-~~~~a~~~ad~~l~~~~~~~i~~~i~~ 775 (1051)
.. |+--..+++.++...+.++++||+.+|+.+.+.|++ +|.+. .. ..+.....+++++.+ +..+...+.+
T Consensus 148 ~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~--~~~l~~~l~~ 223 (226)
T PRK13222 148 KKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDH--FAELLPLLGL 223 (226)
T ss_pred CCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECC--HHHHHHHHHH
Confidence 12 222234444444456789999999999999999998 44443 11 223445568888854 8888877654
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.77 E-value=9.8e-05 Score=77.93 Aligned_cols=42 Identities=10% Similarity=0.271 Sum_probs=38.1
Q ss_pred CCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCC
Q 001568 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (1051)
Q Consensus 624 d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~ 665 (1051)
+..-+++.++|++|+++|+++++.||+....+..+.+++|+.
T Consensus 14 ~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 14 GYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 445567999999999999999999999999999999999974
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00053 Score=78.97 Aligned_cols=144 Identities=17% Similarity=0.208 Sum_probs=90.3
Q ss_pred HHHHH-HHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCc--cc--------------------cccCch----HHh
Q 001568 630 VDKAI-DDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDL--TG--------------------RSFTGK----EFM 682 (1051)
Q Consensus 630 ~~~~I-~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~--~~--------------------~~~~g~----~~~ 682 (1051)
...++ +++++.|+.+++.||+.......+.++.++..+.-.+ .+ ...... .+.
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~ 112 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETS 112 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHh
Confidence 44444 8899999999999999999999999999887652100 00 000000 000
Q ss_pred cC--------------------CHH---H----HHHHHHhc--CCe------EEEEeCch--hHHHHHHHHhhc------
Q 001568 683 AL--------------------SST---Q----QIEALSKH--GGK------VFSRAEPR--HKQEIVRMLKEM------ 719 (1051)
Q Consensus 683 ~l--------------------~~~---~----~~~~~~~~--~~~------v~~r~~p~--~K~~iv~~l~~~------ 719 (1051)
.+ .++ . +.+.+... ... -+-...|. .|...++.+.++
T Consensus 113 ~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi 192 (413)
T PLN02382 113 KFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGK 192 (413)
T ss_pred cCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCC
Confidence 00 000 1 11112110 111 12345553 598888888654
Q ss_pred -CCEEEEEcCCccCHHHHHhCC-eeEEeCCCccHHHHhcc--------Ceeec-CCCchHHHHHHH
Q 001568 720 -GEVVAMTGDGVNDAPALKLAD-IGVAMGITGTEVAKEAS--------DMVLA-DDNFGSIVSAVA 774 (1051)
Q Consensus 720 -g~~v~~iGDg~ND~~~l~~Ad-vgia~g~~~~~~a~~~a--------d~~l~-~~~~~~i~~~i~ 774 (1051)
...|+++||+.||.+||+.|+ .||||| ++.+..++.+ +++.. +..-.++.++++
T Consensus 193 ~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 193 APVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred ChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 348899999999999999999 699999 8888777642 44433 345667777763
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00015 Score=69.74 Aligned_cols=117 Identities=19% Similarity=0.204 Sum_probs=75.2
Q ss_pred cccCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeE
Q 001568 621 GLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKV 700 (1051)
Q Consensus 621 ~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v 700 (1051)
.-..++.+++.+.++.|++.|++++++||.....+....+.+|+...... ++.......-..... .........
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~----i~~~~~~~~~~~~~~--~~~~~~~~~ 93 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDP----VITSNGAAIYYPKEG--LFLGGGPFD 93 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhh----eeccchhhhhccccc--ccccccccc
Confidence 44567899999999999999999999999999999999999998432111 111000000000000 000001222
Q ss_pred EEEeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhC-CeeE
Q 001568 701 FSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLA-DIGV 743 (1051)
Q Consensus 701 ~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A-dvgi 743 (1051)
+.+-.|+.+..+.+.+......++++||+.+|+.|++.+ .-+|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 94 IGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred cCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCcee
Confidence 334455556666666665567899999999999999984 4444
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00023 Score=74.29 Aligned_cols=125 Identities=20% Similarity=0.284 Sum_probs=82.2
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.+++.++++.|+++|+++.++|+.....+....+..|+...-+. ++..++. ...+-
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~----i~~~~~~------------------~~~KP 132 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDH----VIGSDEV------------------PRPKP 132 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheee----EEecCcC------------------CCCCC
Confidence 6789999999999999999999999999999998899998532110 0000000 00011
Q ss_pred CchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE---eCC-CccHHHHhccCeeecCCCchHHHHHH
Q 001568 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA---MGI-TGTEVAKEASDMVLADDNFGSIVSAV 773 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia---~g~-~~~~~a~~~ad~~l~~~~~~~i~~~i 773 (1051)
.|+-=..+++.++-..+.+++|||+.+|+.+-++|++... -|. +..+..+..+|+++.+ +..+..++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~--~~~l~~~~ 203 (205)
T TIGR01454 133 APDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRK--PQSLLALC 203 (205)
T ss_pred ChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCC--HHHHHHHh
Confidence 1222233333333335679999999999999999998642 331 2223456778998865 66666554
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00059 Score=72.14 Aligned_cols=39 Identities=18% Similarity=0.212 Sum_probs=35.9
Q ss_pred ChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCC
Q 001568 627 RGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (1051)
Q Consensus 627 r~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~ 665 (1051)
-+.+.++|+.|+++|+++++.||+....+..+.+.+|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999985
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00014 Score=77.77 Aligned_cols=67 Identities=21% Similarity=0.264 Sum_probs=57.4
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCccCHHHHHhCCeeEEeCCCccHHHHhccC----eeecCCCchHHHHHHH
Q 001568 707 RHKQEIVRMLKEM-G---EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASD----MVLADDNFGSIVSAVA 774 (1051)
Q Consensus 707 ~~K~~iv~~l~~~-g---~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~a~~~ad----~~l~~~~~~~i~~~i~ 774 (1051)
..|...++.+.++ | ..|+++||+.||.+|++.|+.||+|+ ++.+..++.|| ++...++-.++.++|.
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 4788888888664 3 36899999999999999999999999 89999999999 7777777788888875
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00058 Score=74.51 Aligned_cols=120 Identities=20% Similarity=0.248 Sum_probs=80.3
Q ss_pred CCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEE
Q 001568 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (1051)
Q Consensus 624 d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r 703 (1051)
.++.+++.++++.|++.|+++.++|+.+...+..+.++.|+...- ...+.+.
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f----------------------------~~i~~~d 151 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF----------------------------RWIIGGD 151 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC----------------------------eEEEecC
Confidence 367899999999999999999999999999898888888884311 1112222
Q ss_pred eCchhH--H----HHHHHHhhcCCEEEEEcCCccCHHHHHhCCee-EEe--CCCc-cHHHHhccCeeecCCCchHHHHHH
Q 001568 704 AEPRHK--Q----EIVRMLKEMGEVVAMTGDGVNDAPALKLADIG-VAM--GITG-TEVAKEASDMVLADDNFGSIVSAV 773 (1051)
Q Consensus 704 ~~p~~K--~----~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advg-ia~--g~~~-~~~a~~~ad~~l~~~~~~~i~~~i 773 (1051)
..+..| . .+++.+.-..+.+++|||+.||+.+.+.|++. +++ |... .+.....+|.++.+ +..+..++
T Consensus 152 ~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~--l~el~~~~ 229 (272)
T PRK13223 152 TLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDD--LRALLPGC 229 (272)
T ss_pred CCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECC--HHHHHHHH
Confidence 222222 2 22233322356799999999999999999973 333 3222 22344578888854 66666543
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0017 Score=70.44 Aligned_cols=142 Identities=13% Similarity=0.154 Sum_probs=86.9
Q ss_pred CCChhHHHHHHHHHh-CCcEEEEEcCCCHHHHHHHHHHcCCC--CCC--------CCccccccCchHH------------
Q 001568 625 PPRGGVDKAIDDCRG-AGIEVMVITGDNKSTAEAICRQIKLF--SGN--------EDLTGRSFTGKEF------------ 681 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~-~gi~v~~~TGd~~~ta~~ia~~~gi~--~~~--------~~~~~~~~~g~~~------------ 681 (1051)
.+-+++.++|+.|++ .|++++++||+.......+.+.+++. ..+ .......+..+..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 356889999999998 79999999999999998888776642 110 0000000000000
Q ss_pred ------------------hcCC--HHHH---HHHHH-hcC-Ce-----EEEEeCc--hhHHHHHHHHhhc----CCEEEE
Q 001568 682 ------------------MALS--STQQ---IEALS-KHG-GK-----VFSRAEP--RHKQEIVRMLKEM----GEVVAM 725 (1051)
Q Consensus 682 ------------------~~l~--~~~~---~~~~~-~~~-~~-----v~~r~~p--~~K~~iv~~l~~~----g~~v~~ 725 (1051)
.... .+.. .+.+. ... .. -+....| .+|...++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 0000 1111 11111 111 11 1223344 4888888876554 467999
Q ss_pred EcCCccCHHHHHhC----CeeEEeCCCccHHHHhccCeeecCCCchHHHHHH
Q 001568 726 TGDGVNDAPALKLA----DIGVAMGITGTEVAKEASDMVLADDNFGSIVSAV 773 (1051)
Q Consensus 726 iGDg~ND~~~l~~A----dvgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i 773 (1051)
+||+.||.+||+.+ +.||+|| ++. ..|++.+.+ ...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~~--~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLAG--VPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCCC--HHHHHHHH
Confidence 99999999999999 9999999 553 347787765 55555444
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00059 Score=71.67 Aligned_cols=117 Identities=14% Similarity=0.135 Sum_probs=78.2
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEE-
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r- 703 (1051)
++.+++.+.++.|++.|+++.++|+.....+..+.+..|+...-+ ..+.+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----------------------------~~~~~~~ 136 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFS----------------------------VLIGGDS 136 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCc----------------------------EEEecCC
Confidence 578999999999999999999999999999999999999853211 111111
Q ss_pred ---eCc--hhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE-e--CCCc-cHHHHhccCeeecCCCchHHHH
Q 001568 704 ---AEP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA-M--GITG-TEVAKEASDMVLADDNFGSIVS 771 (1051)
Q Consensus 704 ---~~p--~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia-~--g~~~-~~~a~~~ad~~l~~~~~~~i~~ 771 (1051)
..| +-=....+.+.-....++++||+.+|+.+.++|++-.. + |... .+.....+|+++.+ +..+..
T Consensus 137 ~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~--~~~l~~ 211 (213)
T TIGR01449 137 LAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS--LNELPP 211 (213)
T ss_pred CCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC--HHHHHh
Confidence 112 11122233333334679999999999999999998743 2 2111 12233468887755 655543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0011 Score=69.58 Aligned_cols=124 Identities=20% Similarity=0.213 Sum_probs=81.6
Q ss_pred CChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeC
Q 001568 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705 (1051)
Q Consensus 626 lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~ 705 (1051)
+.+++.+.++.|+++|+++.++|+.....+..+.+..|+...-.. ++..++.. .....
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~----i~~~~~~~------------------~~Kp~ 140 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDV----VITLDDVE------------------HAKPD 140 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeE----EEecCcCC------------------CCCCC
Confidence 689999999999999999999999999999999999998542110 11100000 00112
Q ss_pred chhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee---EEeCCCccH-HHHhccCeeecCCCchHHHHHH
Q 001568 706 PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG---VAMGITGTE-VAKEASDMVLADDNFGSIVSAV 773 (1051)
Q Consensus 706 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advg---ia~g~~~~~-~a~~~ad~~l~~~~~~~i~~~i 773 (1051)
|+--.++++.+......+++|||+.+|..+-++|++- +.-|....+ .....+|+++.+ +..+...+
T Consensus 141 p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~--~~~l~~~i 210 (214)
T PRK13288 141 PEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDK--MSDLLAIV 210 (214)
T ss_pred cHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECC--HHHHHHHH
Confidence 2222334444433456799999999999999999984 333322222 334568888764 77776654
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0026 Score=67.91 Aligned_cols=42 Identities=19% Similarity=0.368 Sum_probs=38.4
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCC
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~ 666 (1051)
..-+.+.++|++|+++||.+++.||........+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 356779999999999999999999999999999999999853
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0022 Score=76.20 Aligned_cols=40 Identities=3% Similarity=0.033 Sum_probs=36.6
Q ss_pred CChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCC
Q 001568 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (1051)
Q Consensus 626 lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~ 665 (1051)
.-+.+.++|+.|+++|+.+++.||+....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4467899999999999999999999999999999999974
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.003 Score=67.56 Aligned_cols=130 Identities=16% Similarity=0.231 Sum_probs=84.5
Q ss_pred CCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCcc--------ccccCchHHhcCCHHHHHHHHHh
Q 001568 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLT--------GRSFTGKEFMALSSTQQIEALSK 695 (1051)
Q Consensus 624 d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~--------~~~~~g~~~~~l~~~~~~~~~~~ 695 (1051)
-+++||+.+.++.|+++|+++.++||-....+..+.+++|+......+. ..+.+|..
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~--------------- 184 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK--------------- 184 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC---------------
Confidence 3579999999999999999999999999999999999999864432210 01111100
Q ss_pred cCCeEEEEeCchhHHHHHHH-----Hh--hcCCEEEEEcCCccCHHHHHhC---CeeEEeCC-Ccc-----HHHHhccCe
Q 001568 696 HGGKVFSRAEPRHKQEIVRM-----LK--EMGEVVAMTGDGVNDAPALKLA---DIGVAMGI-TGT-----EVAKEASDM 759 (1051)
Q Consensus 696 ~~~~v~~r~~p~~K~~iv~~-----l~--~~g~~v~~iGDg~ND~~~l~~A---dvgia~g~-~~~-----~~a~~~ad~ 759 (1051)
. .-+....|.+.+.. ++ .....|+++|||.||+.|..-. .--+.+|- +.. +.-.++=|+
T Consensus 185 -~----P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Di 259 (277)
T TIGR01544 185 -G----PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDI 259 (277)
T ss_pred -C----CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCE
Confidence 0 00112456554432 22 2246799999999999995433 11233331 111 224667899
Q ss_pred eecCCCchHHHHHH
Q 001568 760 VLADDNFGSIVSAV 773 (1051)
Q Consensus 760 ~l~~~~~~~i~~~i 773 (1051)
|+.+|.-..++..|
T Consensus 260 vl~~D~t~~v~~~i 273 (277)
T TIGR01544 260 VLVQDETLEVANSI 273 (277)
T ss_pred EEECCCCchHHHHH
Confidence 99999877777765
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0028 Score=67.07 Aligned_cols=119 Identities=14% Similarity=0.167 Sum_probs=77.0
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.|++.++++.|++.|+++.++|+........+.+..|+...-.. ++.+++.. ..
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~----~~~~~~~~--------------------~~ 147 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDA----LASAEKLP--------------------YS 147 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccE----EEEcccCC--------------------CC
Confidence 5789999999999999999999999999999999999998643111 11110000 01
Q ss_pred CchhHHHHHHHHhhc---CCEEEEEcCCccCHHHHHhCCeeEEeCCCc---cHHHHhccCeeecCCCchHHH
Q 001568 705 EPRHKQEIVRMLKEM---GEVVAMTGDGVNDAPALKLADIGVAMGITG---TEVAKEASDMVLADDNFGSIV 770 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~---g~~v~~iGDg~ND~~~l~~Advgia~g~~~---~~~a~~~ad~~l~~~~~~~i~ 770 (1051)
.|+.. -+...+++. .+.++++||+.+|+.+-+.|++....-..+ .+.-...+|.++.+ +..+.
T Consensus 148 Kp~~~-~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~--~~dl~ 216 (222)
T PRK10826 148 KPHPE-VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES--LTELT 216 (222)
T ss_pred CCCHH-HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC--HHHHh
Confidence 12111 223333333 357999999999999999999875432122 11222346777654 55544
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.004 Score=67.70 Aligned_cols=118 Identities=15% Similarity=0.184 Sum_probs=80.5
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.|++.+.++.|++.|+++.++|+.....+..+-+.+|+...-+ ..+.+..
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~----------------------------~vi~~~~ 193 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS----------------------------VVQAGTP 193 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE----------------------------EEEecCC
Confidence 468999999999999999999999999999999999999854211 1111111
Q ss_pred CchhHHHHH-HHHhh---cCCEEEEEcCCccCHHHHHhCCeeEE---eCCCccH-HHHhccCeeecCCCchHHHHHH
Q 001568 705 EPRHKQEIV-RMLKE---MGEVVAMTGDGVNDAPALKLADIGVA---MGITGTE-VAKEASDMVLADDNFGSIVSAV 773 (1051)
Q Consensus 705 ~p~~K~~iv-~~l~~---~g~~v~~iGDg~ND~~~l~~Advgia---~g~~~~~-~a~~~ad~~l~~~~~~~i~~~i 773 (1051)
.+ .|.+.. +.+++ ..+.+++|||+.+|+.+-++|++-.. -|....+ .....+|+++.+ +..+...+
T Consensus 194 ~~-~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~--~~eL~~~~ 267 (273)
T PRK13225 194 IL-SKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLET--PSDLLQAV 267 (273)
T ss_pred CC-CCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECC--HHHHHHHH
Confidence 11 122332 23333 34579999999999999999998643 2311111 234468988855 77777654
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0043 Score=64.70 Aligned_cols=106 Identities=12% Similarity=0.074 Sum_probs=74.6
Q ss_pred CCChhHHHHHH-HHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEE
Q 001568 625 PPRGGVDKAID-DCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (1051)
Q Consensus 625 ~lr~~~~~~I~-~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r 703 (1051)
.++|++.+.|+ .+++.|++++++|+-....+..+|+..++..... ++ +.++..... ....-..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~-----~i-~t~le~~~g----------g~~~g~~ 157 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN-----LI-ASQIERGNG----------GWVLPLR 157 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc-----EE-EEEeEEeCC----------ceEcCcc
Confidence 46899999995 8899999999999999999999999966633211 11 111110000 0111234
Q ss_pred eCchhHHHHHHHH-hhcCCEEEEEcCCccCHHHHHhCCeeEEeC
Q 001568 704 AEPRHKQEIVRML-KEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (1051)
Q Consensus 704 ~~p~~K~~iv~~l-~~~g~~v~~iGDg~ND~~~l~~Advgia~g 746 (1051)
|..++|..-++.. ........+-||+.||.|||+.||-+++++
T Consensus 158 c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 158 CLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred CCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 6778998877654 323345578999999999999999999986
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0036 Score=66.48 Aligned_cols=124 Identities=14% Similarity=0.078 Sum_probs=80.6
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+...-. .++.+++.. ...-
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~----~i~~~~~~~------------------~~KP 152 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCA----VLIGGDTLA------------------ERKP 152 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhccc----EEEecCcCC------------------CCCC
Confidence 478999999999999999999999999988888888888854211 011110000 0011
Q ss_pred CchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE---eCCC-cc-HHHHhccCeeecCCCchHHHHH
Q 001568 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA---MGIT-GT-EVAKEASDMVLADDNFGSIVSA 772 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia---~g~~-~~-~~a~~~ad~~l~~~~~~~i~~~ 772 (1051)
.|+-=..+++.+.-..+.+++|||+.+|..+-+.|++... -|.. .. +.....+|+++.+ +..+...
T Consensus 153 ~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~--~~el~~~ 223 (229)
T PRK13226 153 HPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQ--PQLLWNP 223 (229)
T ss_pred CHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCC--HHHHHHH
Confidence 2222234444554456789999999999999999998742 2311 11 1234568888865 6666544
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0063 Score=63.68 Aligned_cols=106 Identities=13% Similarity=0.082 Sum_probs=75.0
Q ss_pred CCChhHHHHH-HHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEE
Q 001568 625 PPRGGVDKAI-DDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (1051)
Q Consensus 625 ~lr~~~~~~I-~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r 703 (1051)
.+.|++.+.| +.+++.|++++++|+-...-+..+++.+|+.... .+ + +.+++.. .. .-..-..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~~----i-~t~l~~~--------~t--g~~~g~~ 158 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-NL----I-ASQMQRR--------YG--GWVLTLR 158 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-ce----E-EEEEEEE--------Ec--cEECCcc
Confidence 4589999999 6788999999999999999999999999963211 11 1 1111100 00 0111224
Q ss_pred eCchhHHHHHHHH-hhcCCEEEEEcCCccCHHHHHhCCeeEEeC
Q 001568 704 AEPRHKQEIVRML-KEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (1051)
Q Consensus 704 ~~p~~K~~iv~~l-~~~g~~v~~iGDg~ND~~~l~~Advgia~g 746 (1051)
|..++|..-++.. ........+-||+.||.|||+.|+-+++++
T Consensus 159 c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 159 CLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred CCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 6778998877754 334455678999999999999999999986
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0072 Score=65.89 Aligned_cols=89 Identities=18% Similarity=0.153 Sum_probs=63.1
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++-|++.++++.|++.|+++.++||.....+..+-+..|+..... ...+.+..
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~---------------------------d~i~~~~~ 153 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP---------------------------DHVVTTDD 153 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc---------------------------eEEEcCCc
Confidence 467899999999999999999999999998888888777643210 01111111
Q ss_pred ----CchhHHHHHHHHhhcC----CEEEEEcCCccCHHHHHhCCe
Q 001568 705 ----EPRHKQEIVRMLKEMG----EVVAMTGDGVNDAPALKLADI 741 (1051)
Q Consensus 705 ----~p~~K~~iv~~l~~~g----~~v~~iGDg~ND~~~l~~Adv 741 (1051)
-| +...+.+.+++.| ..++||||+.+|+.+-+.|++
T Consensus 154 ~~~~KP-~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 154 VPAGRP-YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred CCCCCC-ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 12 1223344444432 569999999999999999997
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0064 Score=65.44 Aligned_cols=117 Identities=16% Similarity=0.171 Sum_probs=76.9
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.|++.++++.|++.|+++.++|+-....+...-+.+|+...-+ .++.+++.. ...-
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd----~iv~~~~~~------------------~~KP 165 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQ----AVIIGSECE------------------HAKP 165 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCc----EEEecCcCC------------------CCCC
Confidence 468899999999999999999999999999999999999864211 111111110 0011
Q ss_pred CchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE-e--CCCccHHHHhccCeeecC
Q 001568 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA-M--GITGTEVAKEASDMVLAD 763 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia-~--g~~~~~~a~~~ad~~l~~ 763 (1051)
.|+-=....+.+.-..+.+++|||+.+|+.+-++|++-.. + |....+.....+|+++.+
T Consensus 166 ~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 166 HPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred ChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 2222233344444345679999999999999999998632 2 211112223468888866
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.003 Score=66.55 Aligned_cols=83 Identities=19% Similarity=0.302 Sum_probs=61.3
Q ss_pred CChhHHHHHHHHHhCCcEEEEEcCC----CHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEE
Q 001568 626 PRGGVDKAIDDCRGAGIEVMVITGD----NKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (1051)
Q Consensus 626 lr~~~~~~I~~l~~~gi~v~~~TGd----~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~ 701 (1051)
+.+++.+.++.+++.|+++.++|+. ...++..+.+.+|+.... ..++
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f-----------------------------~~i~ 165 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN-----------------------------PVIF 165 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe-----------------------------eEEE
Confidence 4556999999999999999999998 778999999999995421 1122
Q ss_pred EE-e----CchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee
Q 001568 702 SR-A----EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (1051)
Q Consensus 702 ~r-~----~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advg 742 (1051)
+. . .| +|. ..+++.+ .++|+||..||..+-+.|++-
T Consensus 166 ~~d~~~~~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 166 AGDKPGQYQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CCCCCCCCCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 21 1 12 233 3445555 479999999999999999765
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0091 Score=64.48 Aligned_cols=122 Identities=11% Similarity=0.091 Sum_probs=77.4
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.+++.+.++.|+++|+++.++|+.....+..+-+.+|+...-+ .++.+++... ..-
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd----~ii~~~d~~~------------------~KP 166 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFS----VVLAAEDVYR------------------GKP 166 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCc----EEEecccCCC------------------CCC
Confidence 468999999999999999999999999999999999999854211 1111111100 011
Q ss_pred CchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE-EeCCCccHHHHhccCeeecCCCchHHH
Q 001568 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV-AMGITGTEVAKEASDMVLADDNFGSIV 770 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgi-a~g~~~~~~a~~~ad~~l~~~~~~~i~ 770 (1051)
.|+-=...++.+.-....+++|||+.+|+.+-+.|++-. ++...........+|+++.+ +..+.
T Consensus 167 ~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~--~~el~ 231 (260)
T PLN03243 167 DPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR--LDDLS 231 (260)
T ss_pred CHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC--HHHHH
Confidence 111112333333334567999999999999999999853 22212222223346777655 55443
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0085 Score=64.79 Aligned_cols=94 Identities=19% Similarity=0.191 Sum_probs=65.3
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+..... ..++.+++.. +.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~---d~ii~~~~~~--------------------~~ 155 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP---DYNVTTDDVP--------------------AG 155 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC---ceEEccccCC--------------------CC
Confidence 467899999999999999999999999999999999988864210 0111111100 01
Q ss_pred CchhHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCee
Q 001568 705 EPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIG 742 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~Advg 742 (1051)
.| +...+.+.+++. .+.+++|||+.+|+.+-+.|++-
T Consensus 156 KP-~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 156 RP-APWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred CC-CHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 12 122333444433 34699999999999999999975
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0056 Score=64.51 Aligned_cols=87 Identities=22% Similarity=0.309 Sum_probs=63.5
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCC----HHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeE
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDN----KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKV 700 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~----~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v 700 (1051)
.+.+++.+.++.|++.|+++.++||+. ..++..+.+..|+..... ...+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~---------------------------f~vi 166 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNM---------------------------NPVI 166 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccc---------------------------eeEE
Confidence 478889999999999999999999964 668999999999942110 1123
Q ss_pred EEEeCc--hhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee
Q 001568 701 FSRAEP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (1051)
Q Consensus 701 ~~r~~p--~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advg 742 (1051)
++..++ .+|.. .+++.+ .++++||..+|..+-+.|++-
T Consensus 167 l~gd~~~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 167 FAGDKPGQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred EcCCCCCCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 332222 34554 334444 489999999999999999875
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.007 Score=63.89 Aligned_cols=122 Identities=24% Similarity=0.339 Sum_probs=78.7
Q ss_pred CCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCC--CCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEE
Q 001568 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF--SGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (1051)
Q Consensus 624 d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~--~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~ 701 (1051)
.++.+|+.+.++.|++.|+++.++|+-....+..+.+.+|+. ...+ .++...+..
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~----~i~~~~~~~------------------- 142 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVD----AVVCPSDVA------------------- 142 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCC----EEEcCCcCC-------------------
Confidence 368999999999999999999999999999999999999986 3211 111111100
Q ss_pred EEeCchhHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCeeEEeC-CCcc---H-HHHhccCeeecCCCchHHHHH
Q 001568 702 SRAEPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMG-ITGT---E-VAKEASDMVLADDNFGSIVSA 772 (1051)
Q Consensus 702 ~r~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~Advgia~g-~~~~---~-~a~~~ad~~l~~~~~~~i~~~ 772 (1051)
+.-|+. ..+.+.+++. ...+++|||+.+|+.+-+.|++..+++ ..|. + .....+|+++.+ +..+..+
T Consensus 143 -~~KP~p-~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~--~~~l~~~ 218 (220)
T TIGR03351 143 -AGRPAP-DLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDS--VADLPAL 218 (220)
T ss_pred -CCCCCH-HHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecC--HHHHHHh
Confidence 011211 1222333332 357999999999999999999986322 1222 1 223457777654 5555443
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.011 Score=61.46 Aligned_cols=39 Identities=21% Similarity=0.370 Sum_probs=35.6
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcC
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIK 663 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~g 663 (1051)
++.+++.++|++|++.|++++++||+....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999999988754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.011 Score=62.17 Aligned_cols=115 Identities=15% Similarity=0.097 Sum_probs=72.1
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.||+.+.++.|+++|+++.++|+.....+...-+..|+... ..++++++... ..-
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-----~~i~~~~~~~~------------------~KP 139 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-----EVFVTAERVKR------------------GKP 139 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-----cEEEEHHHhcC------------------CCC
Confidence 4789999999999999999999999887777666667776321 11122211100 011
Q ss_pred CchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee-EEeCCCcc-HHHHhccCeeecC
Q 001568 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG-VAMGITGT-EVAKEASDMVLAD 763 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advg-ia~g~~~~-~~a~~~ad~~l~~ 763 (1051)
.|+-=....+.+.-..+.+++|||+.+|+.+-+.|++- |++. .+. ......+|+++.+
T Consensus 140 ~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 140 EPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLHS 199 (218)
T ss_pred CcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEecc
Confidence 12222223333333457899999999999999999985 5444 222 2223356776654
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.013 Score=58.52 Aligned_cols=144 Identities=19% Similarity=0.255 Sum_probs=90.9
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCc-----cccccC-ch--H-H------hcCCHHHH
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDL-----TGRSFT-GK--E-F------MALSSTQQ 689 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~-----~~~~~~-g~--~-~------~~l~~~~~ 689 (1051)
.+-|++.++++.|++. ...+++|-.-.+-+.++|.-+|+...+... ++..+. +. + + ..++.+++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 3678999999999765 456666777788889999999996543221 111111 00 0 0 11112222
Q ss_pred HHHHHhcCCeEEEEeCchh---------------HHHHHHHHhhc---CCEEEEEcCCccCHHHHHhCC-ee-EEeCCCc
Q 001568 690 IEALSKHGGKVFSRAEPRH---------------KQEIVRMLKEM---GEVVAMTGDGVNDAPALKLAD-IG-VAMGITG 749 (1051)
Q Consensus 690 ~~~~~~~~~~v~~r~~p~~---------------K~~iv~~l~~~---g~~v~~iGDg~ND~~~l~~Ad-vg-ia~g~~~ 749 (1051)
.+.+. .+|.|..|.. |.++++.+-+. ....+++||+..|+.||+.+. -| +|+.-+|
T Consensus 162 fe~lD----e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNG 237 (315)
T COG4030 162 FEKLD----ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNG 237 (315)
T ss_pred HHHHH----HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecC
Confidence 22222 2455655544 44444444332 334689999999999999873 22 4445589
Q ss_pred cHHHHhccCeeecCCCchHHHHHH
Q 001568 750 TEVAKEASDMVLADDNFGSIVSAV 773 (1051)
Q Consensus 750 ~~~a~~~ad~~l~~~~~~~i~~~i 773 (1051)
.+-|...||+.+..++.......|
T Consensus 238 NeYal~eAdVAvisp~~~a~~pvi 261 (315)
T COG4030 238 NEYALKEADVAVISPTAMAEAPVI 261 (315)
T ss_pred CcccccccceEEeccchhhhhHHH
Confidence 999999999999988877776665
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.0061 Score=58.98 Aligned_cols=109 Identities=16% Similarity=0.147 Sum_probs=71.8
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
.++|+.++.++.+++.+++++++|+-..--...+-++++=.....++ ..+.+...+. .. . ....++...
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~i-di~sn~~~ih-~d--g-------~h~i~~~~d 141 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCI-DIVSNNDYIH-ID--G-------QHSIKYTDD 141 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeee-EEeecCceEc-CC--C-------ceeeecCCc
Confidence 47899999999999999999999988776666666665411000000 0000000000 00 0 011222222
Q ss_pred C--chhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 001568 705 E--PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA 744 (1051)
Q Consensus 705 ~--p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia 744 (1051)
+ -.+|...|+.+++..+.+.++|||+.|..|-+.+|+-.|
T Consensus 142 s~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 142 SQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 2 258999999999999999999999999999998888774
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.016 Score=59.94 Aligned_cols=94 Identities=17% Similarity=0.061 Sum_probs=64.8
Q ss_pred cCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEE
Q 001568 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS 702 (1051)
Q Consensus 623 ~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~ 702 (1051)
.+++.+++.++++.|++.|+++.++||-....+..+.+.+|+...-+ .++.+++ +..
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~----~~~~~~~-------------------~~~ 160 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFP----VQIWMED-------------------CPP 160 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCC----EEEeecC-------------------CCC
Confidence 34466778999999999999999999999999999999999854211 0111100 001
Q ss_pred EeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhC
Q 001568 703 RAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLA 739 (1051)
Q Consensus 703 r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A 739 (1051)
+-.|+--...++.+.-....+++|||+.+|+.+-++|
T Consensus 161 KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 161 KPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 2233333444555554567899999999999886654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.015 Score=55.79 Aligned_cols=88 Identities=17% Similarity=0.155 Sum_probs=62.2
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCC--------HHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhc
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDN--------KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKH 696 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~--------~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~ 696 (1051)
++.+++.++++.|+++|+++.++|+.. ......+.+.+|+...
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~----------------------------- 75 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID----------------------------- 75 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE-----------------------------
Confidence 578999999999999999999999998 7778888888887421
Q ss_pred CCeEEE--EeCc--hhHHHHHHHHh-hcCCEEEEEcC-CccCHHHHHhCCee
Q 001568 697 GGKVFS--RAEP--RHKQEIVRMLK-EMGEVVAMTGD-GVNDAPALKLADIG 742 (1051)
Q Consensus 697 ~~~v~~--r~~p--~~K~~iv~~l~-~~g~~v~~iGD-g~ND~~~l~~Advg 742 (1051)
..+++ ...| +-=..+++.++ -..+.++|||| ..+|+.+-+.|++-
T Consensus 76 -~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 76 -VLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred -EEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 00111 0112 11123333442 33568999999 69999999998764
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.065 Score=67.15 Aligned_cols=60 Identities=23% Similarity=0.313 Sum_probs=47.3
Q ss_pred hhHHHHHHHHhhc--CCEEEEEcCCccCHHHHHhC---CeeEEeCCCccHHHHhccCeeecCCCchHHHHHH
Q 001568 707 RHKQEIVRMLKEM--GEVVAMTGDGVNDAPALKLA---DIGVAMGITGTEVAKEASDMVLADDNFGSIVSAV 773 (1051)
Q Consensus 707 ~~K~~iv~~l~~~--g~~v~~iGDg~ND~~~l~~A---dvgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i 773 (1051)
-+|...++.+.+. ...++++||+.||.+||+.+ +.+|+|| ++ +.+|++.+.+. ..+..++
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRLPSQ--REVRELL 720 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeCCCH--HHHHHHH
Confidence 5899999988875 35899999999999999986 6899998 43 45688888763 5555554
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.024 Score=60.81 Aligned_cols=45 Identities=33% Similarity=0.383 Sum_probs=36.4
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCeeEEeCCCccHH
Q 001568 707 RHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752 (1051)
Q Consensus 707 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~~ 752 (1051)
..|...|+.++++ .+.|+++||+.||.+||..++-||.+| ++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHH
Confidence 5799999998876 246788999999999999999999999 66665
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.029 Score=57.12 Aligned_cols=115 Identities=23% Similarity=0.227 Sum_probs=68.5
Q ss_pred CChhHHHHHHHHHhCCcEEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHH
Q 001568 626 PRGGVDKAIDDCRGAGIEVMVITGDNK---------------STAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQI 690 (1051)
Q Consensus 626 lr~~~~~~I~~l~~~gi~v~~~TGd~~---------------~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~ 690 (1051)
+.+|+.+.++.|++.|+++.++|+.+. .....+-+..|+.-
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f------------------------ 85 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRL------------------------ 85 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCcc------------------------
Confidence 679999999999999999999998763 11122233445410
Q ss_pred HHHHhcCCeEEE-----------EeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE-EeCCCccH---HHHh
Q 001568 691 EALSKHGGKVFS-----------RAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV-AMGITGTE---VAKE 755 (1051)
Q Consensus 691 ~~~~~~~~~v~~-----------r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgi-a~g~~~~~---~a~~ 755 (1051)
...+++ .-.|+--..+++.+.-..+.++||||+.+|+.+-+.|++.. .+. .|.. ....
T Consensus 86 ------~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~ 158 (181)
T PRK08942 86 ------DGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEG 158 (181)
T ss_pred ------ceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhcc
Confidence 001111 11122223334444434578999999999999999999752 222 2221 1222
Q ss_pred cc--CeeecCCCchHHHHHH
Q 001568 756 AS--DMVLADDNFGSIVSAV 773 (1051)
Q Consensus 756 ~a--d~~l~~~~~~~i~~~i 773 (1051)
.+ |+++.+ +..+.+.+
T Consensus 159 ~~~~~~ii~~--l~el~~~l 176 (181)
T PRK08942 159 AAPGTWVLDS--LADLPQAL 176 (181)
T ss_pred cCCCceeecC--HHHHHHHH
Confidence 34 777654 66666654
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.048 Score=53.85 Aligned_cols=104 Identities=23% Similarity=0.255 Sum_probs=66.3
Q ss_pred cCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHH---HHHHHc---C--CCCCCCCccccccCchHHhcCCHHHHHHHHH
Q 001568 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAE---AICRQI---K--LFSGNEDLTGRSFTGKEFMALSSTQQIEALS 694 (1051)
Q Consensus 623 ~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~---~ia~~~---g--i~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~ 694 (1051)
+|...+++.+++++++++|++++++||+....+. ....++ | +... .+ ....|..+..+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g--~l--i~~~g~~~~~~~--------- 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHG--PV--LLSPDRLFAALH--------- 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCc--eE--EEcCCcchhhhh---------
Confidence 5678999999999999999999999999988874 444442 2 3211 00 001111110000
Q ss_pred hcCCeEEEEeCchhHHHHHHHHhh-----cCCEEEEEcCCccCHHHHHhCCee
Q 001568 695 KHGGKVFSRAEPRHKQEIVRMLKE-----MGEVVAMTGDGVNDAPALKLADIG 742 (1051)
Q Consensus 695 ~~~~~v~~r~~p~~K~~iv~~l~~-----~g~~v~~iGDg~ND~~~l~~Advg 742 (1051)
+ .+..+-.-+.|.+.++.+++ ....++.+||+.+|+.+.++++|.
T Consensus 92 --~-e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 92 --R-EVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred --c-ccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 1 11112222347777777776 356778899999999999988664
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.014 Score=60.47 Aligned_cols=95 Identities=12% Similarity=0.158 Sum_probs=65.3
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.+++.++++.|++.|+++.++|+-+........+.+|+...-+ .++..++.. ..
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd----~i~~s~~~~--------------------~~ 147 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFD----AVLSADAVR--------------------AY 147 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhh----eeEehhhcC--------------------CC
Confidence 478999999999999999999999999998888889999853211 111111110 11
Q ss_pred CchhH--HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 001568 705 EPRHK--QEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (1051)
Q Consensus 705 ~p~~K--~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgi 743 (1051)
.|+.. ..+.+.+.-..+.+++|||+.+|+.+-+.|++-.
T Consensus 148 KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 148 KPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred CCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 22211 2233333333567999999999999999988763
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.028 Score=66.47 Aligned_cols=122 Identities=14% Similarity=0.129 Sum_probs=80.2
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.||+.+.++.|++.|+++.++|+-....+..+.+.+|+...-+. ++.+++.. ...
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~----i~~~d~v~-------------------~~~ 386 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTE----TFSIEQIN-------------------SLN 386 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcce----eEecCCCC-------------------CCC
Confidence 5789999999999999999999999999999999999998542111 11111100 011
Q ss_pred CchhHHHHHHHHhh-cCCEEEEEcCCccCHHHHHhCCee-EEeCC-CccHHHHhccCeeecCCCchHHHHHHH
Q 001568 705 EPRHKQEIVRMLKE-MGEVVAMTGDGVNDAPALKLADIG-VAMGI-TGTEVAKEASDMVLADDNFGSIVSAVA 774 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~-~g~~v~~iGDg~ND~~~l~~Advg-ia~g~-~~~~~a~~~ad~~l~~~~~~~i~~~i~ 774 (1051)
.|+ .+...+++ ..+.+++|||+.+|+.+-+.|++- |.+.. .+.+.....+|+++.+ +..+...+.
T Consensus 387 kP~---~~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~ 454 (459)
T PRK06698 387 KSD---LVKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDD--LLELKGILS 454 (459)
T ss_pred CcH---HHHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCC--HHHHHHHHH
Confidence 222 12222222 245799999999999999999984 33321 1122223457888765 777776653
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.031 Score=55.99 Aligned_cols=112 Identities=8% Similarity=0.075 Sum_probs=72.6
Q ss_pred EEEEEecccCCCChhHHHHHHHHHhCCcEEEEEcCC-CHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHH
Q 001568 615 VFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGD-NKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEAL 693 (1051)
Q Consensus 615 ~~lG~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd-~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~ 693 (1051)
......+-+-++.+++.+.++.|+++|+++.++|+- ....+..+-..+|+....... .+.+..
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~----------------~~~~~F 98 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTV----------------PMHSLF 98 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcc----------------cHHHhc
Confidence 344445555578999999999999999999999975 888999898889885211000 000000
Q ss_pred HhcCCeEEEEeCchhH--HHHHHHHhhc------CCEEEEEcCCccCHHHHHhCCeeEEe
Q 001568 694 SKHGGKVFSRAEPRHK--QEIVRMLKEM------GEVVAMTGDGVNDAPALKLADIGVAM 745 (1051)
Q Consensus 694 ~~~~~~v~~r~~p~~K--~~iv~~l~~~------g~~v~~iGDg~ND~~~l~~Advgia~ 745 (1051)
...+.++..+..| ..+.+.+.+. ...+++|||...|+.+-++|++-.+.
T Consensus 99 ---d~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 99 ---DDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred ---eeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 1222222211122 2344444432 36799999999999999999887643
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.04 Score=62.09 Aligned_cols=118 Identities=14% Similarity=0.148 Sum_probs=77.7
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.+|+.+.++.|+++|+++.++|+-....+..+-+..||...-+. ++.+++.. +-
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~----Iv~sddv~--------------------~~ 271 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSV----IVAAEDVY--------------------RG 271 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceE----EEecCcCC--------------------CC
Confidence 3679999999999999999999999999999999999998542111 11111100 11
Q ss_pred Cch--hHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE-eCCCccHH-HHhccCeeecCCCchHH
Q 001568 705 EPR--HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA-MGITGTEV-AKEASDMVLADDNFGSI 769 (1051)
Q Consensus 705 ~p~--~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia-~g~~~~~~-a~~~ad~~l~~~~~~~i 769 (1051)
.|+ -=...++.+.-....++||||..+|+.+-+.|++-.. +. .+... ....+|+++.+ +..+
T Consensus 272 KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI~s--~~EL 337 (381)
T PLN02575 272 KPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVVRR--LDEL 337 (381)
T ss_pred CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEECC--HHHH
Confidence 121 1133344444446789999999999999999998632 22 22222 22347877755 5554
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.022 Score=60.16 Aligned_cols=91 Identities=11% Similarity=-0.006 Sum_probs=64.9
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.+++.+.++.|++.|+++.++|+-+...+...-+..|+...- ...+.+..
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f----------------------------d~iv~s~~ 144 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL----------------------------DLLLSTHT 144 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC----------------------------CEEEEeee
Confidence 57899999999999999999999999888888887888875321 12222222
Q ss_pred CchhH--HHHHHH-Hhh---cCCEEEEEcCCccCHHHHHhCCeeE
Q 001568 705 EPRHK--QEIVRM-LKE---MGEVVAMTGDGVNDAPALKLADIGV 743 (1051)
Q Consensus 705 ~p~~K--~~iv~~-l~~---~g~~v~~iGDg~ND~~~l~~Advgi 743 (1051)
....| .++... +++ ..+.+++|||+.+|+.+-+.|++..
T Consensus 145 ~~~~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 145 FGYPKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred CCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 21122 233332 233 3457999999999999999999963
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.094 Score=52.59 Aligned_cols=37 Identities=8% Similarity=0.216 Sum_probs=34.0
Q ss_pred hHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCC
Q 001568 629 GVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (1051)
Q Consensus 629 ~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~ 665 (1051)
.+.+.+..|+++|++|+..|.-....-...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678899999999999999999999999999999987
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.026 Score=59.52 Aligned_cols=93 Identities=19% Similarity=0.181 Sum_probs=63.9
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.|++.++++.|+++|++++++|+-+...+....+.+|+...-+. ++.+.+. .+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~----i~~~~~~--------------------~~~ 149 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDA----VITSEEE--------------------GVE 149 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccE----EEEeccC--------------------CCC
Confidence 4789999999999999999999999988888888888888532110 1111000 011
Q ss_pred CchhHHHHHHHHhhc---CCEEEEEcCCc-cCHHHHHhCCee
Q 001568 705 EPRHKQEIVRMLKEM---GEVVAMTGDGV-NDAPALKLADIG 742 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~---g~~v~~iGDg~-ND~~~l~~Advg 742 (1051)
.|+.. .+...+++. ...+++|||.. +|+.+-++|++-
T Consensus 150 KP~~~-~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 150 KPHPK-IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred CCCHH-HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCE
Confidence 22211 223333333 46799999998 999999999875
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.048 Score=57.67 Aligned_cols=117 Identities=19% Similarity=0.182 Sum_probs=75.0
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.+++.++++.|+ +|+++.++|+.....+...-+..|+...- ...+++..
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f----------------------------d~v~~~~~ 145 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF----------------------------DLLVISEQ 145 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc----------------------------CEEEEECc
Confidence 46899999999999 68999999999888888888888884311 12233322
Q ss_pred ----CchhHHHHHHHHhhcC----CEEEEEcCCc-cCHHHHHhCCee-EEeCCCccH-HHHhccCeeecCCCchHHHHHH
Q 001568 705 ----EPRHKQEIVRMLKEMG----EVVAMTGDGV-NDAPALKLADIG-VAMGITGTE-VAKEASDMVLADDNFGSIVSAV 773 (1051)
Q Consensus 705 ----~p~~K~~iv~~l~~~g----~~v~~iGDg~-ND~~~l~~Advg-ia~g~~~~~-~a~~~ad~~l~~~~~~~i~~~i 773 (1051)
-|+ ..-+...+++.| +.+++|||+. +|+.+-+.|++- |.+...+.+ .....+|+++.+ +..+..++
T Consensus 146 ~~~~KP~-p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~--~~el~~~l 222 (224)
T PRK09449 146 VGVAKPD-VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSS--LSELEQLL 222 (224)
T ss_pred cCCCCCC-HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECC--HHHHHHHH
Confidence 121 122223333332 5799999998 799999999985 333311211 111246777654 66666544
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.032 Score=56.71 Aligned_cols=89 Identities=18% Similarity=0.215 Sum_probs=61.3
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.+++.+.++.|++.|+++.++|+-.... ..+..++|+...- ...+++..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f----------------------------~~i~~~~~ 135 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF----------------------------DVVIFSGD 135 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC----------------------------CEEEEcCC
Confidence 578999999999999999999999988877 5555568875321 11122211
Q ss_pred ----Cc--hhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee
Q 001568 705 ----EP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (1051)
Q Consensus 705 ----~p--~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advg 742 (1051)
.| +-=..+.+.+.-....++++||...|+.+-++|++-
T Consensus 136 ~~~~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 136 VGRGKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 12 112233333333457899999999999998988873
|
HAD subfamilies caused by an overly broad single model. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.03 Score=62.30 Aligned_cols=108 Identities=17% Similarity=0.150 Sum_probs=74.2
Q ss_pred cccCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCC-CCCCccccccCchHHhcCCHHHHHHHHHhcCCe
Q 001568 621 GLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS-GNEDLTGRSFTGKEFMALSSTQQIEALSKHGGK 699 (1051)
Q Consensus 621 ~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~-~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 699 (1051)
...+++.+++.++++.|++.|++++++||.....+..+.+.+|+.. .-+.+ .+.+. ....+. ..
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i-----~~~~~-------~~~~~~---~~ 247 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDL-----IGRPP-------DMHFQR---EQ 247 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhh-----hCCcc-------hhhhcc---cC
Confidence 3577899999999999999999999999999999999999998853 11100 00000 000000 00
Q ss_pred EEEEeCchhHHHHHHHHhh-cCCEEEEEcCCccCHHHHHhCCeeE
Q 001568 700 VFSRAEPRHKQEIVRMLKE-MGEVVAMTGDGVNDAPALKLADIGV 743 (1051)
Q Consensus 700 v~~r~~p~~K~~iv~~l~~-~g~~v~~iGDg~ND~~~l~~Advgi 743 (1051)
--.+-.|+-+...++.+.. .-..++|+||..+|+.+-+.|++-.
T Consensus 248 ~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 248 GDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 0013345566666665433 3478999999999999999999874
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.013 Score=58.87 Aligned_cols=95 Identities=18% Similarity=0.287 Sum_probs=66.4
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.+++.+.++.|++.|++++++|+-.........+++|+...-+ .++...+... .
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~----~i~~~~~~~~--------------------~ 132 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFD----EIISSDDVGS--------------------R 132 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCS----EEEEGGGSSS--------------------S
T ss_pred chhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccc----cccccchhhh--------------------h
Confidence 478999999999999999999999999999999999999863211 1111111100 0
Q ss_pred Cc--hhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 001568 705 EP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (1051)
Q Consensus 705 ~p--~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgi 743 (1051)
.| +-=..+++.+.-..+.+++|||+..|+.+-+.|++--
T Consensus 133 Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 133 KPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp TTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred hhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 11 1112333444434678999999999999999998753
|
... |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.052 Score=54.76 Aligned_cols=98 Identities=8% Similarity=-0.080 Sum_probs=57.0
Q ss_pred CChhHHHHHHHHHhCCcEEEEEcCCCHH--------HHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcC
Q 001568 626 PRGGVDKAIDDCRGAGIEVMVITGDNKS--------TAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHG 697 (1051)
Q Consensus 626 lr~~~~~~I~~l~~~gi~v~~~TGd~~~--------ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~ 697 (1051)
+.|++.++++.|++.|+++.++|+.... ......+..|+..... .....+++.
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~---~~~~~~~~~---------------- 89 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYL---CPHKHGDGC---------------- 89 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEE---CcCCCCCCC----------------
Confidence 6899999999999999999999987642 1222334455532000 000000000
Q ss_pred CeEEEEeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 001568 698 GKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA 744 (1051)
Q Consensus 698 ~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia 744 (1051)
-..+-.|+-=.++++.+.-..+.+++|||+.+|+.+-++|++-..
T Consensus 90 --~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 90 --ECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred --CCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 000111111133333333334679999999999999999988744
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.024 Score=57.87 Aligned_cols=92 Identities=13% Similarity=0.189 Sum_probs=58.8
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.|++.++|+.|+++|+++.++|+... +....+.+|+...-+ .++.+.+. .+.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~----~~~~~~~~--------------------~~~ 140 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFD----AIVDPAEI--------------------KKG 140 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCc----EEEehhhc--------------------CCC
Confidence 5789999999999999999999997543 345677788753211 11111110 011
Q ss_pred CchhHHHHHHHHhhc---CCEEEEEcCCccCHHHHHhCCeeE
Q 001568 705 EPRHKQEIVRMLKEM---GEVVAMTGDGVNDAPALKLADIGV 743 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~---g~~v~~iGDg~ND~~~l~~Advgi 743 (1051)
.|+ ...+-..+++. .+.+++|||+.+|+.+-+.|++-.
T Consensus 141 kp~-p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 141 KPD-PEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred CCC-hHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEE
Confidence 221 11222233332 456999999999999999998853
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.076 Score=58.34 Aligned_cols=119 Identities=20% Similarity=0.212 Sum_probs=71.1
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.|++.+.++.|++.|+++.++|+-+......+-+..+........ .++.+++.. ...-
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~--~~v~~~~~~------------------~~KP 203 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGL--DVFAGDDVP------------------KKKP 203 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCce--EEEeccccC------------------CCCC
Confidence 47899999999999999999999999888877766655322110000 000111000 0001
Q ss_pred CchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCccH--HHHhccCeeecC
Q 001568 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTE--VAKEASDMVLAD 763 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~g~~~~~--~a~~~ad~~l~~ 763 (1051)
.|+-=..+++.+.-....+++|||+.+|+.+-+.|++....-..|.. .....+|+++.+
T Consensus 204 ~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 204 DPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred CHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 11111233334433456799999999999999999987543323321 112357887754
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.096 Score=54.94 Aligned_cols=110 Identities=23% Similarity=0.302 Sum_probs=70.3
Q ss_pred CCChhHHHHHHHH--HhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccc--cccCchHHhcCCHHHHHHHHHhcCCeE
Q 001568 625 PPRGGVDKAIDDC--RGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTG--RSFTGKEFMALSSTQQIEALSKHGGKV 700 (1051)
Q Consensus 625 ~lr~~~~~~I~~l--~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~--~~~~g~~~~~l~~~~~~~~~~~~~~~v 700 (1051)
|+.++.++.++.+ ++.|+.+.++|--|..--..+-+.-|+...-..+.. ...++...-.+. . +...-
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~--------p-yh~h~ 141 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVR--------P-YHSHG 141 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEe--------C-ccCCC
Confidence 5788999999999 568999999999999999999999998543211100 001110000000 0 01112
Q ss_pred EEEeCc-hhHHHHHHHHhhc----C---CEEEEEcCCccC-HHHHH--hCCeeE
Q 001568 701 FSRAEP-RHKQEIVRMLKEM----G---EVVAMTGDGVND-APALK--LADIGV 743 (1051)
Q Consensus 701 ~~r~~p-~~K~~iv~~l~~~----g---~~v~~iGDg~ND-~~~l~--~Advgi 743 (1051)
+.+|.| -=|..+++.+++. | ..|..||||.|| +|+++ .+|+-.
T Consensus 142 C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 142 CSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVF 195 (234)
T ss_pred CCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEe
Confidence 335554 3699999888765 4 699999999999 45543 455443
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.053 Score=57.27 Aligned_cols=89 Identities=18% Similarity=0.194 Sum_probs=63.2
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.+++.+.++.|++. +++.++|+-....+..+.+++|+...-+ ..+.+..
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd----------------------------~i~~~~~ 147 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFD----------------------------DIFVSED 147 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcC----------------------------EEEEcCc
Confidence 5789999999999999 9999999999999888899999854211 1111111
Q ss_pred ----CchhH--HHHHHHH-hhcCCEEEEEcCCc-cCHHHHHhCCee
Q 001568 705 ----EPRHK--QEIVRML-KEMGEVVAMTGDGV-NDAPALKLADIG 742 (1051)
Q Consensus 705 ----~p~~K--~~iv~~l-~~~g~~v~~iGDg~-ND~~~l~~Advg 742 (1051)
.|+.. ...++.+ .-....+++|||+. +|+.+-+.+++-
T Consensus 148 ~~~~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~ 193 (224)
T TIGR02254 148 AGIQKPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLD 193 (224)
T ss_pred cCCCCCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCc
Confidence 13221 2333333 22345799999998 899999999974
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.036 Score=54.26 Aligned_cols=96 Identities=22% Similarity=0.253 Sum_probs=58.8
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHH
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNK---------------STAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQ 689 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~---------------~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~ 689 (1051)
++.+++.++++.|++.|+++.++|+... ..+..+.+.+|+.... .........+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~~~~~---------- 95 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG-VLFCPHHPAD---------- 95 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE-EEECCCCCCC----------
Confidence 4689999999999999999999998762 4455666777774110 0000000000
Q ss_pred HHHHHhcCCeEEEEeCchhHHHHHH-HHhh---cCCEEEEEcCCccCHHHHHhCCeeE
Q 001568 690 IEALSKHGGKVFSRAEPRHKQEIVR-MLKE---MGEVVAMTGDGVNDAPALKLADIGV 743 (1051)
Q Consensus 690 ~~~~~~~~~~v~~r~~p~~K~~iv~-~l~~---~g~~v~~iGDg~ND~~~l~~Advgi 743 (1051)
.... ..| +.++.+ .+++ ..+.+++|||...|+.+-+.|++-.
T Consensus 96 ---------~~~~-~KP--~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 96 ---------NCSC-RKP--KPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ---------CCCC-CCC--CHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 0000 012 222333 2233 3467999999999999999888754
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.035 Score=56.63 Aligned_cols=93 Identities=14% Similarity=0.153 Sum_probs=60.2
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.||+.++++.|+++|+++.++|+. ..+..+-+.+|+...-+. ++.+.+. .+.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~----v~~~~~~--------------------~~~ 141 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDA----IVDADEV--------------------KEG 141 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCE----eeehhhC--------------------CCC
Confidence 58999999999999999999999987 556777778887532110 1111000 011
Q ss_pred CchhH--HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 001568 705 EPRHK--QEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (1051)
Q Consensus 705 ~p~~K--~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgi 743 (1051)
.|... ....+.+.-..+.+++|||+.+|+.+-+.|++..
T Consensus 142 kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 142 KPHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred CCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 22211 1222222222457899999999999999998753
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.1 Score=52.76 Aligned_cols=27 Identities=19% Similarity=0.315 Sum_probs=24.4
Q ss_pred CChhHHHHHHHHHhCCcEEEEEcCCCH
Q 001568 626 PRGGVDKAIDDCRGAGIEVMVITGDNK 652 (1051)
Q Consensus 626 lr~~~~~~I~~l~~~gi~v~~~TGd~~ 652 (1051)
+.|++.++|+.|+++|+++.++|.-+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 578999999999999999999997663
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.08 Score=60.68 Aligned_cols=95 Identities=16% Similarity=0.152 Sum_probs=63.4
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHH-HcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEE
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR-QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~-~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r 703 (1051)
++.+++.+.++.|++.|+++.++|+.....+....+ ..|+...-+ .++.+++.. +
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd----~ii~~d~v~--------------------~ 148 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFS----VIVGGDEVE--------------------K 148 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCC----EEEehhhcC--------------------C
Confidence 467999999999999999999999998888776655 567743211 111111110 1
Q ss_pred eCc--hhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 001568 704 AEP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (1051)
Q Consensus 704 ~~p--~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgi 743 (1051)
..| +-=...++.+.-..+.+++|||+.+|+.+-+.|++..
T Consensus 149 ~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~ 190 (382)
T PLN02940 149 GKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEV 190 (382)
T ss_pred CCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEE
Confidence 112 1112233333333567999999999999999999873
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.06 Score=54.10 Aligned_cols=85 Identities=14% Similarity=0.164 Sum_probs=59.9
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCC-HHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEE
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDN-KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~-~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r 703 (1051)
.+.+++.++++.|++.|+++.++|+.+ ...+..+.+.+|+... +..
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~---------------------------------~~~ 89 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL---------------------------------PHA 89 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE---------------------------------cCC
Confidence 567899999999999999999999988 6777788888876310 001
Q ss_pred eCchhH--HHHHHHHhhcCCEEEEEcCCc-cCHHHHHhCCee
Q 001568 704 AEPRHK--QEIVRMLKEMGEVVAMTGDGV-NDAPALKLADIG 742 (1051)
Q Consensus 704 ~~p~~K--~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~Advg 742 (1051)
.-|... ..+.+.+.-....++||||.. .|..+-+.|++-
T Consensus 90 ~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 90 VKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred CCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 122111 222222222345799999998 799999999875
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.17 Score=54.39 Aligned_cols=86 Identities=10% Similarity=0.224 Sum_probs=60.9
Q ss_pred cCCCChhHHHHHHHHHhCCcEEEEEcCCCHH---HHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCe
Q 001568 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKS---TAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGK 699 (1051)
Q Consensus 623 ~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~---ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 699 (1051)
..++-|++.+.++.|++.|+++.++|+.... .+...-+..|+.... ...
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~----------------------------~d~ 167 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQAD----------------------------EEH 167 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCC----------------------------cce
Confidence 3457899999999999999999999998743 344555678885321 123
Q ss_pred EEEEeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHH
Q 001568 700 VFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPAL 736 (1051)
Q Consensus 700 v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l 736 (1051)
++.|-....|..-.+.+.+.-.+++++||-.+|....
T Consensus 168 lllr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 168 LLLKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred EEeCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 4444333456666666666666799999999998543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.03 Score=54.82 Aligned_cols=91 Identities=19% Similarity=0.096 Sum_probs=63.3
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++||++.+.++.|+ .++++.++|.-+...+..+-+.+|+.... ...+ +.+..
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~---f~~i------------------------~~~~d 96 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF---GYRR------------------------LFRDE 96 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE---eeeE------------------------EECcc
Confidence 57999999999998 57999999999999999999998874210 0111 11111
Q ss_pred CchhHHHHHHHHhh---cCCEEEEEcCCccCHHHHHhCCeeE
Q 001568 705 EPRHKQEIVRMLKE---MGEVVAMTGDGVNDAPALKLADIGV 743 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~---~g~~v~~iGDg~ND~~~l~~Advgi 743 (1051)
....|..+.+.++. ..+.+++|||..+|..+-++|+|-|
T Consensus 97 ~~~~KP~~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 97 CVFVKGKYVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred ccccCCeEeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 11112224444433 4578999999999999877776665
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.093 Score=51.72 Aligned_cols=85 Identities=21% Similarity=0.269 Sum_probs=56.1
Q ss_pred CChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeC
Q 001568 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705 (1051)
Q Consensus 626 lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~ 705 (1051)
..+++.+.++.|++.|+++.++|+-....+....+.. +.... ..+++.-.
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f-----------------------------~~i~~~~~ 114 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYF-----------------------------DLILGSDE 114 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcC-----------------------------cEEEecCC
Confidence 3478999999999999999999999999888877765 32210 11221111
Q ss_pred --chhHHHHHH-HHhhcCC--EEEEEcCCccCHHHHHhCC
Q 001568 706 --PRHKQEIVR-MLKEMGE--VVAMTGDGVNDAPALKLAD 740 (1051)
Q Consensus 706 --p~~K~~iv~-~l~~~g~--~v~~iGDg~ND~~~l~~Ad 740 (1051)
++-+.++.. .+++.|. .+++|||+.+|+.+-+.|+
T Consensus 115 ~~~Kp~~~~~~~~~~~~~~~~~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 115 FGAKPEPEIFLAALESLGLPPEVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CCCCcCHHHHHHHHHHcCCCCCEEEEeCCHHHHHHHHHcc
Confidence 111223332 2333221 7999999999998887764
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.097 Score=54.36 Aligned_cols=88 Identities=19% Similarity=0.159 Sum_probs=58.2
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++-+++.++++.|++.|+++.++|+-... .....+.+|+...-+ ..+.+..
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd----------------------------~i~~s~~ 155 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFD----------------------------FVVTSYE 155 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcc----------------------------eEEeecc
Confidence 47789999999999999999999976554 466677777743211 1111111
Q ss_pred ----CchhHHHHHHHHhh---cCCEEEEEcCCc-cCHHHHHhCCee
Q 001568 705 ----EPRHKQEIVRMLKE---MGEVVAMTGDGV-NDAPALKLADIG 742 (1051)
Q Consensus 705 ----~p~~K~~iv~~l~~---~g~~v~~iGDg~-ND~~~l~~Advg 742 (1051)
-|+ ..-+...+++ ....+++|||+. +|+.+-++|++-
T Consensus 156 ~~~~KP~-~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 156 VGAEKPD-PKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred cCCCCCC-HHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 121 1222233333 346899999997 899988888754
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.037 Score=59.50 Aligned_cols=53 Identities=21% Similarity=0.221 Sum_probs=43.3
Q ss_pred hhHHHHHHHHhhcCCEEEEEcC----CccCHHHHHhC-CeeEEeCCCccHHHHhccCee
Q 001568 707 RHKQEIVRMLKEMGEVVAMTGD----GVNDAPALKLA-DIGVAMGITGTEVAKEASDMV 760 (1051)
Q Consensus 707 ~~K~~iv~~l~~~g~~v~~iGD----g~ND~~~l~~A-dvgia~g~~~~~~a~~~ad~~ 760 (1051)
-+|..-++.+.++.+.|+++|| |.||.+||+.| -.|++++ ++.+..+..+.+.
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 5899999999888889999999 99999999976 5667667 7777777655443
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.12 Score=49.17 Aligned_cols=39 Identities=5% Similarity=0.108 Sum_probs=34.8
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCC-CHHHHHHHHHHcC
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGD-NKSTAEAICRQIK 663 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd-~~~ta~~ia~~~g 663 (1051)
++.+++.+.++.|+++|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7877777777766
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.087 Score=52.27 Aligned_cols=90 Identities=16% Similarity=0.126 Sum_probs=59.0
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCC---------------HHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHH
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDN---------------KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQ 689 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~---------------~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~ 689 (1051)
++-+++.++++.|++.|+++.++|.-. ...+..+.+.+|+.-
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f----------------------- 85 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF----------------------- 85 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce-----------------------
Confidence 367899999999999999999999752 345566667777731
Q ss_pred HHHHHhcCCeEEE-----EeC--chhHHHHHHHH-hhc---CCEEEEEcCCccCHHHHHhCCeeEE
Q 001568 690 IEALSKHGGKVFS-----RAE--PRHKQEIVRML-KEM---GEVVAMTGDGVNDAPALKLADIGVA 744 (1051)
Q Consensus 690 ~~~~~~~~~~v~~-----r~~--p~~K~~iv~~l-~~~---g~~v~~iGDg~ND~~~l~~Advgia 744 (1051)
...+++ ... ..-|..++..+ ++. ...+.||||+.+|+.+-+.|++-..
T Consensus 86 -------d~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 86 -------DDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred -------eEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 011111 000 11223333333 222 3569999999999999999988753
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.42 Score=49.89 Aligned_cols=80 Identities=18% Similarity=0.143 Sum_probs=55.0
Q ss_pred CCCChhHHHHHHHHHhCCcEEEEEcCCCHHH---HHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeE
Q 001568 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKST---AEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKV 700 (1051)
Q Consensus 624 d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~t---a~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v 700 (1051)
-|.-+++.+.++.+++.|++|+++||+.... +..--++.|+... + .+
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~-----------------------------~L 168 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-K-----------------------------HL 168 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-C-----------------------------ee
Confidence 3678999999999999999999999999765 3333345676531 1 12
Q ss_pred EEEeC-ch------hHHHHHHHHhhcCC-EEEEEcCCccCH
Q 001568 701 FSRAE-PR------HKQEIVRMLKEMGE-VVAMTGDGVNDA 733 (1051)
Q Consensus 701 ~~r~~-p~------~K~~iv~~l~~~g~-~v~~iGDg~ND~ 733 (1051)
+-|-. .. -|.+.-+.+.+.|+ +++.+||-.+|.
T Consensus 169 iLR~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 169 ILRGLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred eecCCCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 22221 11 16666666766666 558899999887
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.53 E-value=0.23 Score=55.72 Aligned_cols=90 Identities=14% Similarity=0.069 Sum_probs=59.8
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCC---------------CHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHH
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGD---------------NKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQ 689 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd---------------~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~ 689 (1051)
++.|++.++++.|+++|+++.++|+- ....+..+.+..|+.- +
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f--d-------------------- 87 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF--D-------------------- 87 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce--e--------------------
Confidence 57899999999999999999999983 2334555666666631 0
Q ss_pred HHHHHhcCCeEEEE-----e--CchhHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCeeEE
Q 001568 690 IEALSKHGGKVFSR-----A--EPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVA 744 (1051)
Q Consensus 690 ~~~~~~~~~~v~~r-----~--~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~Advgia 744 (1051)
..+++- . ...-|..++..+.++ ...+.||||+.+|..+-+.|++-..
T Consensus 88 --------~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 88 --------EVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred --------eEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 011110 0 112234444433332 4789999999999999999988743
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.19 Score=50.13 Aligned_cols=39 Identities=13% Similarity=0.262 Sum_probs=31.5
Q ss_pred ChhHHHHHHHHHhCCcEEEEEcCCCHH------------HHHHHHHHcCCC
Q 001568 627 RGGVDKAIDDCRGAGIEVMVITGDNKS------------TAEAICRQIKLF 665 (1051)
Q Consensus 627 r~~~~~~I~~l~~~gi~v~~~TGd~~~------------ta~~ia~~~gi~ 665 (1051)
-+|+.++++.|+++|+++.++|.-... .+..+.+.+|+.
T Consensus 44 ~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 44 YPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred cCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 489999999999999999999975542 455677788873
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=93.14 E-value=0.26 Score=51.61 Aligned_cols=99 Identities=14% Similarity=0.109 Sum_probs=63.2
Q ss_pred cCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcC---CCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCe
Q 001568 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIK---LFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGK 699 (1051)
Q Consensus 623 ~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~g---i~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~ 699 (1051)
+-++.+|+.++++.|+++|+++.++|..+......+-+..+ +...-+. .+ ...
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~----~f--------------------d~~ 148 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSG----YF--------------------DTT 148 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcce----EE--------------------EeC
Confidence 34689999999999999999999999988877766665542 2110000 00 000
Q ss_pred EEEEeCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe
Q 001568 700 VFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAM 745 (1051)
Q Consensus 700 v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~ 745 (1051)
+...-.|+-=..+++.+.-..+.++++||...|+.+-++|++-...
T Consensus 149 ~g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 149 VGLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred cccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 1111112211333344433356799999999999999999987533
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=93.08 E-value=0.35 Score=47.84 Aligned_cols=86 Identities=15% Similarity=0.154 Sum_probs=65.4
Q ss_pred cCCCChhHHHHHHHHHhCCc--EEEEEcCC-------CHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHH
Q 001568 623 RDPPRGGVDKAIDDCRGAGI--EVMVITGD-------NKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEAL 693 (1051)
Q Consensus 623 ~d~lr~~~~~~I~~l~~~gi--~v~~~TGd-------~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~ 693 (1051)
++.+.++..+.+++|++.+. +++++|.- +...|..+++.+|+.
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp---------------------------- 108 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP---------------------------- 108 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc----------------------------
Confidence 45688999999999999987 59999986 489999999999983
Q ss_pred HhcCCeEEEEeCchhHHHHHHHHhhc-----CCEEEEEcCC-ccCHHHHHhCC
Q 001568 694 SKHGGKVFSRAEPRHKQEIVRMLKEM-----GEVVAMTGDG-VNDAPALKLAD 740 (1051)
Q Consensus 694 ~~~~~~v~~r~~p~~K~~iv~~l~~~-----g~~v~~iGDg-~ND~~~l~~Ad 740 (1051)
+..+...-|.-..++.+.++.+ -+.++||||- ..|+-+=...+
T Consensus 109 ----vl~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G 157 (168)
T PF09419_consen 109 ----VLRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMG 157 (168)
T ss_pred ----EEEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccC
Confidence 1222334676667888888765 6789999997 46776644443
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=93.08 E-value=0.27 Score=51.73 Aligned_cols=91 Identities=21% Similarity=0.182 Sum_probs=57.2
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHH-HHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEE
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEA-ICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~-ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r 703 (1051)
++.+++.+.|+.|++.|+++.++||-....... ..+..++.... ...+++.
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f----------------------------~~i~~~~ 129 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLM----------------------------HHVVTGD 129 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhC----------------------------CEEEECC
Confidence 468999999999999999999999977654332 22222332110 1112222
Q ss_pred --e------CchhHHHHHHHHh---hcCCEEEEEcCCccCHHHHHhCCeeE
Q 001568 704 --A------EPRHKQEIVRMLK---EMGEVVAMTGDGVNDAPALKLADIGV 743 (1051)
Q Consensus 704 --~------~p~~K~~iv~~l~---~~g~~v~~iGDg~ND~~~l~~Advgi 743 (1051)
. .|+-=...++.+. -..+.+++|||+..|+.+-+.|++-.
T Consensus 130 ~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 130 DPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred hhhccCCCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 1 1111123333332 22467999999999999999999864
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.15 E-value=0.53 Score=45.57 Aligned_cols=83 Identities=22% Similarity=0.318 Sum_probs=60.2
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
..-|++.+=+++++++|+++.++|.-++..+...++.+|+.- ++--.
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f---------------------------------i~~A~ 92 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF---------------------------------IYRAK 92 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce---------------------------------eeccc
Confidence 367889999999999999999999999999999999999853 11112
Q ss_pred CchhHHHHHHHHhh---cCCEEEEEcCCc-cCHHHHHhCCe
Q 001568 705 EPRHKQEIVRMLKE---MGEVVAMTGDGV-NDAPALKLADI 741 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~---~g~~v~~iGDg~-ND~~~l~~Adv 741 (1051)
-|-. ..+-+++++ ..+.|+||||-. .|+-+=..|++
T Consensus 93 KP~~-~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 93 KPFG-RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred CccH-HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 2322 233444444 467899999974 68766555543
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=92.10 E-value=0.47 Score=61.67 Aligned_cols=115 Identities=15% Similarity=0.185 Sum_probs=74.7
Q ss_pred CChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeC
Q 001568 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705 (1051)
Q Consensus 626 lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~ 705 (1051)
+.+|+.+.++.|+++|+++.++|+-....+...-++.|+.... ...++..++. .+.-
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~---Fd~iv~~~~~--------------------~~~K 218 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM---FDAIVSADAF--------------------ENLK 218 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH---CCEEEECccc--------------------ccCC
Confidence 5789999999999999999999999999998888889985110 0011111110 0112
Q ss_pred chh--HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee-EEeCCCc---cHHHHhccCeeecCC
Q 001568 706 PRH--KQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG-VAMGITG---TEVAKEASDMVLADD 764 (1051)
Q Consensus 706 p~~--K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advg-ia~g~~~---~~~a~~~ad~~l~~~ 764 (1051)
|+. =.+.++.+.-..+.+++|||..+|+.+-+.|++- |.+. .+ .+.....+|+++.+-
T Consensus 219 P~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~-~~~~~~~L~~~~a~~vi~~l 282 (1057)
T PLN02919 219 PAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVT-TTLSEEILKDAGPSLIRKDI 282 (1057)
T ss_pred CCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCCHHHHhhCCCCEEECCh
Confidence 221 1233333333457799999999999999999984 3333 22 223345677777663
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.87 E-value=0.29 Score=52.44 Aligned_cols=69 Identities=23% Similarity=0.285 Sum_probs=50.3
Q ss_pred EEEEeCchhHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhC--------CeeEEeCCCccHHHHhccCeeecCCCch
Q 001568 700 VFSRAEPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLA--------DIGVAMGITGTEVAKEASDMVLADDNFG 767 (1051)
Q Consensus 700 v~~r~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A--------dvgia~g~~~~~~a~~~ad~~l~~~~~~ 767 (1051)
+-.+..+.+|...++.+.+. ...++++||+.||..|++.+ ..||+|+ .+. .+..|++++.+ ..
T Consensus 159 ~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~--~~~~A~~~~~~--~~ 233 (244)
T TIGR00685 159 VELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SGS--KKTVAKFHLTG--PQ 233 (244)
T ss_pred EEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cCC--cCCCceEeCCC--HH
Confidence 44455567898888877654 35799999999999999998 5888885 332 34568888875 66
Q ss_pred HHHHHH
Q 001568 768 SIVSAV 773 (1051)
Q Consensus 768 ~i~~~i 773 (1051)
.+...+
T Consensus 234 ~v~~~L 239 (244)
T TIGR00685 234 QVLEFL 239 (244)
T ss_pred HHHHHH
Confidence 666555
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=91.82 E-value=0.21 Score=52.25 Aligned_cols=91 Identities=19% Similarity=0.105 Sum_probs=55.4
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHH--HHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEE
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKST--AEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS 702 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~t--a~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~ 702 (1051)
++.+++.+.++.|++.|+++.++|+..... ........++...- ...+.+
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f----------------------------d~v~~s 145 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF----------------------------DAVVES 145 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC----------------------------CEEEEe
Confidence 578999999999999999999999865432 22222223332110 111111
Q ss_pred Ee----CchhH--HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 001568 703 RA----EPRHK--QEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (1051)
Q Consensus 703 r~----~p~~K--~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgi 743 (1051)
.. -|+-. ..+++.+.-....+++|||...|+.+-++|++-.
T Consensus 146 ~~~~~~KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 146 CLEGLRKPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred eecCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 11 12211 2222333333467899999999999999998853
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=91.80 E-value=3.1 Score=52.69 Aligned_cols=39 Identities=10% Similarity=0.169 Sum_probs=32.8
Q ss_pred CCCChhHHHHHHHH-HhCCcEEEEEcCCCHHHHHHHHHHc
Q 001568 624 DPPRGGVDKAIDDC-RGAGIEVMVITGDNKSTAEAICRQI 662 (1051)
Q Consensus 624 d~lr~~~~~~I~~l-~~~gi~v~~~TGd~~~ta~~ia~~~ 662 (1051)
-.+.+++.++++.| ++.|+.|+++||+...+....-..+
T Consensus 615 ~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 615 KSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 35668999999997 7889999999999999988776543
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=91.42 E-value=0.74 Score=49.27 Aligned_cols=49 Identities=10% Similarity=0.168 Sum_probs=38.0
Q ss_pred EEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHH--HHHHHcCCCC
Q 001568 618 GVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAE--AICRQIKLFS 666 (1051)
Q Consensus 618 G~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~--~ia~~~gi~~ 666 (1051)
|.+.-...+-|++.++++.|+++|+++.++|.-....+. ...+++|+..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~ 67 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINA 67 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCc
Confidence 444556778999999999999999999999986554433 4567888853
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.31 E-value=0.39 Score=49.63 Aligned_cols=91 Identities=14% Similarity=0.127 Sum_probs=57.0
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH-cCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEE
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ-IKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r 703 (1051)
++.+++.++++.|++.|+++.++|.-+.......-.. .++...- ...+.+.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f----------------------------d~v~~s~ 135 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA----------------------------DHIYLSQ 135 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc----------------------------CEEEEec
Confidence 4789999999999999999999998776554332221 2331100 1112222
Q ss_pred e----Cchh--HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 001568 704 A----EPRH--KQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (1051)
Q Consensus 704 ~----~p~~--K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgi 743 (1051)
. .|+- =..+++.+.-..+.+++|||...|+.+-++|++-.
T Consensus 136 ~~~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 136 DLGMRKPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred ccCCCCCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 1 1211 12223333333567999999999999999998864
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=91.26 E-value=0.59 Score=52.35 Aligned_cols=90 Identities=11% Similarity=0.117 Sum_probs=67.6
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH----cCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeE
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ----IKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKV 700 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~----~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v 700 (1051)
++.++++++|+.|++.|+...++|.-+...+..+-++ +|+... -.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~-------------------------------f~ 79 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAED-------------------------------FD 79 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHH-------------------------------ee
Confidence 3578999999999999999999999999999998888 666421 01
Q ss_pred EEEeCchhHHHHHHHHhh----cCCEEEEEcCCccCHHHHHhCCeeEEe
Q 001568 701 FSRAEPRHKQEIVRMLKE----MGEVVAMTGDGVNDAPALKLADIGVAM 745 (1051)
Q Consensus 701 ~~r~~p~~K~~iv~~l~~----~g~~v~~iGDg~ND~~~l~~Advgia~ 745 (1051)
+....++.|.+.++.+.+ ....+++|||...|..+.+.+...+.+
T Consensus 80 ~~~~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 80 ARSINWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred EEEEecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 112234455555544433 246899999999999999998887644
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.14 E-value=0.23 Score=52.30 Aligned_cols=97 Identities=12% Similarity=0.160 Sum_probs=60.9
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.+++.+.++.| ++++.++|+.....+...-+..|+...-. ..++++.+...- +-
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~---~~v~~~~~~~~~------------------KP 143 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFP---DKLFSGYDIQRW------------------KP 143 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCc---ceEeeHHhcCCC------------------CC
Confidence 4568999999998 48999999999888888778888853211 011111111000 01
Q ss_pred CchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe
Q 001568 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAM 745 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~ 745 (1051)
.|+-=....+.+.-..+.+++|||+.+|+.+-++|++.+..
T Consensus 144 ~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 144 DPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 11111222223322345799999999999999999988653
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=90.72 E-value=0.36 Score=43.67 Aligned_cols=49 Identities=22% Similarity=0.352 Sum_probs=35.1
Q ss_pred EEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHH---HHcCCCC
Q 001568 618 GVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAIC---RQIKLFS 666 (1051)
Q Consensus 618 G~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia---~~~gi~~ 666 (1051)
|++...+.+=|++.++|+.|+++|++++++|.....+...++ +++|+.-
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 444456778899999999999999999999988755544444 5577753
|
... |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=90.05 E-value=1.9 Score=42.12 Aligned_cols=104 Identities=20% Similarity=0.221 Sum_probs=67.7
Q ss_pred cCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHH---HHHc-----CCCCCCCCccccccCchHHhcCCHHHHHHHHH
Q 001568 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAI---CRQI-----KLFSGNEDLTGRSFTGKEFMALSSTQQIEALS 694 (1051)
Q Consensus 623 ~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~i---a~~~-----gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~ 694 (1051)
+|..++++.+..+.+++.|++++.+|++..-.+... -.+. ++.... ..++...+ ...+
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gp-----v~~sP~~l--------~~al- 90 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGP-----VLLSPDSL--------FSAL- 90 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCC-----EEECCcch--------hhhh-
Confidence 368999999999999999999999999986554332 2222 443211 01110100 0000
Q ss_pred hcCCeEEEEeCchhHHHHHHHHhhc-----CCEEEEEcCCccCHHHHHhCCee
Q 001568 695 KHGGKVFSRAEPRHKQEIVRMLKEM-----GEVVAMTGDGVNDAPALKLADIG 742 (1051)
Q Consensus 695 ~~~~~v~~r~~p~~K~~iv~~l~~~-----g~~v~~iGDg~ND~~~l~~Advg 742 (1051)
...+..+-.-+.|...++.++.. ....++.|...+|+.+.++++|.
T Consensus 91 --~rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 91 --HREVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred --hccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 11233344456788888888764 45678899999999999988765
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=89.72 E-value=1 Score=46.46 Aligned_cols=93 Identities=15% Similarity=0.144 Sum_probs=56.5
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEe
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~ 704 (1051)
++.||+.+.++.|++.+ +.+++|.-+.......-+.+|+........ ...+.++.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f------------------------~~i~~~~~ 128 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAF------------------------SEVLMCGH 128 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcc------------------------cEEEEecc
Confidence 36899999999999875 566777655444444555666632110000 11222333
Q ss_pred CchhHHHHHH-HHhhcC-CEEEEEcCCccCHHHHHhC--CeeE
Q 001568 705 EPRHKQEIVR-MLKEMG-EVVAMTGDGVNDAPALKLA--DIGV 743 (1051)
Q Consensus 705 ~p~~K~~iv~-~l~~~g-~~v~~iGDg~ND~~~l~~A--dvgi 743 (1051)
.. .|.+++. .+++.| +.+++|||..+|+.+-++| ++-.
T Consensus 129 ~~-~kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 129 DE-SKEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred Cc-ccHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 22 2344444 333334 4588999999999999999 8863
|
2 hypothetical protein; Provisional |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=89.05 E-value=1.3 Score=44.94 Aligned_cols=88 Identities=11% Similarity=0.107 Sum_probs=60.7
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEE-
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r- 703 (1051)
++.+++.++++.|+ .+++++|+-+...+....+.+|+...- ...+.+.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f----------------------------d~i~~~~~ 132 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF----------------------------DGIFCFDT 132 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh----------------------------CeEEEeec
Confidence 36789999999998 478999999999999999999985321 1112211
Q ss_pred -------eCchhH--HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 001568 704 -------AEPRHK--QEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (1051)
Q Consensus 704 -------~~p~~K--~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgi 743 (1051)
..|+.. ..+++.+......+++|||...|+.+=+.|++..
T Consensus 133 ~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 133 ANPDYLLPKPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred ccCccCCCCCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 122211 2333334334567999999999999988887754
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=88.28 E-value=12 Score=42.07 Aligned_cols=62 Identities=18% Similarity=0.243 Sum_probs=44.0
Q ss_pred hhHHHHHHHHhhc-------CCEEEEEcCCccCHHHHHhC-----CeeEEeCCCccHHHHhccCeeecCCCchHHHHHH
Q 001568 707 RHKQEIVRMLKEM-------GEVVAMTGDGVNDAPALKLA-----DIGVAMGITGTEVAKEASDMVLADDNFGSIVSAV 773 (1051)
Q Consensus 707 ~~K~~iv~~l~~~-------g~~v~~iGDg~ND~~~l~~A-----dvgia~g~~~~~~a~~~ad~~l~~~~~~~i~~~i 773 (1051)
-+|...++.+.+. +..++++||-..|-.||+.. ++||.+|.... ...|++.+.+ ...+...+
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L~d--p~eV~~fL 355 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSLQD--PSEVMDFL 355 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeCCC--HHHHHHHH
Confidence 3899999887653 23689999999999998855 57887873222 2457888855 66666555
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=88.05 E-value=3.7 Score=44.30 Aligned_cols=41 Identities=20% Similarity=0.268 Sum_probs=33.3
Q ss_pred CChhHHHHHHHHHhCCcEEEEEcCCCHHH---HHHHHHHcCCCC
Q 001568 626 PRGGVDKAIDDCRGAGIEVMVITGDNKST---AEAICRQIKLFS 666 (1051)
Q Consensus 626 lr~~~~~~I~~l~~~gi~v~~~TGd~~~t---a~~ia~~~gi~~ 666 (1051)
+-+++.++|+.|+++|++++++||.+..+ .....+++|+.-
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~ 65 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDI 65 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 78899999999999999999999977665 444556678753
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=87.56 E-value=1.3 Score=50.12 Aligned_cols=66 Identities=21% Similarity=0.289 Sum_probs=47.8
Q ss_pred EeCc---hhHHHHHHHHhhc-C---C---EEEEEcCCccCHHHHHh-----CCeeEEeCCCccHHHHhccCeeecCCCch
Q 001568 703 RAEP---RHKQEIVRMLKEM-G---E---VVAMTGDGVNDAPALKL-----ADIGVAMGITGTEVAKEASDMVLADDNFG 767 (1051)
Q Consensus 703 r~~p---~~K~~iv~~l~~~-g---~---~v~~iGDg~ND~~~l~~-----Advgia~g~~~~~~a~~~ad~~l~~~~~~ 767 (1051)
+..| -+|...|+.+.+. | . .++++||+.||..||+. +++||+|| ++... -.|++.+.+ -.
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~d--p~ 367 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLRD--PS 367 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcCC--HH
Confidence 4445 4899998887654 2 1 25899999999999996 68999998 55432 257888766 66
Q ss_pred HHHHHH
Q 001568 768 SIVSAV 773 (1051)
Q Consensus 768 ~i~~~i 773 (1051)
.+...+
T Consensus 368 eV~~~L 373 (384)
T PLN02580 368 EVMEFL 373 (384)
T ss_pred HHHHHH
Confidence 666555
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=87.35 E-value=7 Score=46.22 Aligned_cols=98 Identities=14% Similarity=0.081 Sum_probs=62.5
Q ss_pred CChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH-cCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEE-
Q 001568 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ-IKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (1051)
Q Consensus 626 lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r- 703 (1051)
+++++.+. ++++|.+ +++|+-...-+..+|++ +|+..- + |.++... .+...-.+
T Consensus 111 l~~~a~~~---~~~~g~~-vvVSASp~~~Vepfa~~~LGid~V--------I-gTeLev~-----------~~G~~TG~i 166 (497)
T PLN02177 111 VHPETWRV---FNSFGKR-YIITASPRIMVEPFVKTFLGADKV--------L-GTELEVS-----------KSGRATGFM 166 (497)
T ss_pred cCHHHHHH---HHhCCCE-EEEECCcHHHHHHHHHHcCCCCEE--------E-ecccEEC-----------cCCEEeeee
Confidence 56665554 4567754 99999999999999987 898621 0 1111000 00111111
Q ss_pred -----eCchhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCC
Q 001568 704 -----AEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGI 747 (1051)
Q Consensus 704 -----~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgia~g~ 747 (1051)
|.-++|.+-++..........+.||+.||.|||+.||-+.+++.
T Consensus 167 ~g~~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 167 KKPGVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred cCCCCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 34466877776332211223789999999999999999999984
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.07 E-value=3.3 Score=42.04 Aligned_cols=119 Identities=24% Similarity=0.253 Sum_probs=68.3
Q ss_pred CCChhHHHHHHHHHhCCc-EEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCch-HHhcCCHHHHHHHHHhcCCeEEE
Q 001568 625 PPRGGVDKAIDDCRGAGI-EVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGK-EFMALSSTQQIEALSKHGGKVFS 702 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi-~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~~~~~v~~ 702 (1051)
|.-|+..++|+.+++.|- .++++|--|..-...+-+..|+..-- ..+.+.. .+++ + -.+.+...+...-+.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F----~~IfTNPa~~da-~--G~L~v~pyH~~hsC~ 156 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLF----SEIFTNPACVDA-S--GRLLVRPYHTQHSCN 156 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHH----HHHhcCCcccCC-C--CcEEeecCCCCCccC
Confidence 578899999999999996 99999999988888887777774200 0000000 0000 0 000000000111222
Q ss_pred EeCch-hHHHHHHHHhhc-------CCEEEEEcCCccC-HHHHHhCCeeEEeCCCcc
Q 001568 703 RAEPR-HKQEIVRMLKEM-------GEVVAMTGDGVND-APALKLADIGVAMGITGT 750 (1051)
Q Consensus 703 r~~p~-~K~~iv~~l~~~-------g~~v~~iGDg~ND-~~~l~~Advgia~g~~~~ 750 (1051)
+|.|. =|..++..++.. -+.+..+|||.|| +|+++...--+||--.|-
T Consensus 157 ~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgf 213 (256)
T KOG3120|consen 157 LCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGF 213 (256)
T ss_pred cCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCC
Confidence 33221 366666655533 2379999999999 677776666666654443
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=86.45 E-value=1.3 Score=49.40 Aligned_cols=48 Identities=21% Similarity=0.299 Sum_probs=38.3
Q ss_pred EEecccCCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHH---HHcCCC
Q 001568 618 GVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAIC---RQIKLF 665 (1051)
Q Consensus 618 G~i~~~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia---~~~gi~ 665 (1051)
|.+.-.+.+-+++.++|+.|++.|++++++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 444445667799999999999999999999999977666666 567774
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.01 E-value=1.5 Score=44.75 Aligned_cols=93 Identities=13% Similarity=0.090 Sum_probs=58.7
Q ss_pred ChhHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEEEEeCc
Q 001568 627 RGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEP 706 (1051)
Q Consensus 627 r~~~~~~I~~l~~~gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~~r~~p 706 (1051)
-++ .+.++.|++. ++..++||.....+...-+..|+...-+ .+++.++... .+-.|
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd----~i~~~~~~~~------------------~KP~p 145 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFD----AVVAADDVQH------------------HKPAP 145 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHce----EEEehhhccC------------------CCCCh
Confidence 344 5899999865 8999999999999999999999854211 1111111100 00111
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 001568 707 RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (1051)
Q Consensus 707 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~Advgi 743 (1051)
+-=....+.++-....+++|||..+|+.+-+.|++-.
T Consensus 146 ~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 146 DTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 1112223333333456899999999999999998763
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=83.95 E-value=3.1 Score=43.89 Aligned_cols=81 Identities=22% Similarity=0.328 Sum_probs=54.5
Q ss_pred CCChhHHHHHHHHHhCCcEEEEEcCCCHH---HHHHHHHHcCCCCCCCCccccccCchHHhcCCHHHHHHHHHhcCCeEE
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKS---TAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (1051)
Q Consensus 625 ~lr~~~~~~I~~l~~~gi~v~~~TGd~~~---ta~~ia~~~gi~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~v~ 701 (1051)
+.-|++.+.++.+++.|++|+++||++.. .+..=-++.|+... + .++
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~-~-----------------------------~l~ 164 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW-D-----------------------------HLI 164 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB-S-----------------------------CGE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc-c-----------------------------hhc
Confidence 45578999999999999999999998744 23333445565421 1 122
Q ss_pred EEe-Cc-------hhHHHHHHHHhhcCC-EEEEEcCCccCHHH
Q 001568 702 SRA-EP-------RHKQEIVRMLKEMGE-VVAMTGDGVNDAPA 735 (1051)
Q Consensus 702 ~r~-~p-------~~K~~iv~~l~~~g~-~v~~iGDg~ND~~~ 735 (1051)
-|. .+ +-|..--+.+++.|+ +++.+||-.+|..-
T Consensus 165 lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 165 LRPDKDPSKKSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp EEEESSTSS------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccccccccccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 222 21 237777888888865 66899999999754
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=83.82 E-value=4.5 Score=38.09 Aligned_cols=71 Identities=17% Similarity=0.139 Sum_probs=51.1
Q ss_pred CCCChhHHHHHHHHHhCCcEEEEEcCCCHHHHH---------------HHHHHcCCCC-------C-----CCCcccccc
Q 001568 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAE---------------AICRQIKLFS-------G-----NEDLTGRSF 676 (1051)
Q Consensus 624 d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ta~---------------~ia~~~gi~~-------~-----~~~~~~~~~ 676 (1051)
+++.+++.++++.+++.|+.++++||++..... ....+-++.- + ...+....+
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ipYd~l~~~kp~~~~~~~~~dD~~i 102 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVPYDEIYVGKPWCGHDGFYVDDRAI 102 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCCCceEEeCCCcCCCCCceecchhh
Confidence 678899999999999999999999999876433 3333445542 1 112345567
Q ss_pred CchHHhcCCHHHHHHHHH
Q 001568 677 TGKEFMALSSTQQIEALS 694 (1051)
Q Consensus 677 ~g~~~~~l~~~~~~~~~~ 694 (1051)
..+++.+++.+++.+++.
T Consensus 103 r~~~~~~~~~~~~~~~~~ 120 (126)
T TIGR01689 103 RPSEFSSLTYDEINTLTK 120 (126)
T ss_pred CHHHHHhcCHHHHHHHHh
Confidence 777888888888877765
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=82.00 E-value=8.5 Score=41.16 Aligned_cols=31 Identities=16% Similarity=0.279 Sum_probs=27.4
Q ss_pred cCCCChhHHHHHHHHHhCCcEEEEEcCCCHH
Q 001568 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKS 653 (1051)
Q Consensus 623 ~d~lr~~~~~~I~~l~~~gi~v~~~TGd~~~ 653 (1051)
+.|.-|++.+..+.+++.|++|+++||+...
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 3466789999999999999999999999864
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1051 | ||||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 0.0 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 0.0 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 0.0 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 0.0 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 4e-99 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 5e-99 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 4e-98 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 1e-96 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-32 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 7e-23 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 8e-25 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 1e-23 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 1e-15 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 1e-15 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 2e-15 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 8e-15 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 6e-14 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 6e-14 | ||
| 2voy_H | 48 | Cryoem Model Of Copa, The Copper Transporting Atpas | 6e-11 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 7e-11 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 8e-11 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 7e-10 | ||
| 2voy_B | 42 | Cryoem Model Of Copa, The Copper Transporting Atpas | 2e-09 | ||
| 2voy_K | 32 | Cryoem Model Of Copa, The Copper Transporting Atpas | 2e-09 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 8e-07 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 9e-07 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 9e-07 | ||
| 3gwi_A | 170 | Crystal Structure Of Mg-Atpase Nucleotide Binding D | 9e-06 | ||
| 2voy_G | 36 | Cryoem Model Of Copa, The Copper Transporting Atpas | 7e-05 | ||
| 2voy_L | 21 | Cryoem Model Of Copa, The Copper Transporting Atpas | 3e-04 | ||
| 1q3i_A | 214 | Crystal Structure Of Na,K-Atpase N-Domain Length = | 8e-04 |
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|2VOY|H Chain H, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 48 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|2VOY|B Chain B, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 42 | Back alignment and structure |
|
| >pdb|2VOY|K Chain K, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 32 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|3GWI|A Chain A, Crystal Structure Of Mg-Atpase Nucleotide Binding Domain Length = 170 | Back alignment and structure |
|
| >pdb|2VOY|G Chain G, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 36 | Back alignment and structure |
|
| >pdb|2VOY|L Chain L, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 21 | Back alignment and structure |
|
| >pdb|1Q3I|A Chain A, Crystal Structure Of Na,K-Atpase N-Domain Length = 214 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1051 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 0.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 0.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 0.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 0.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 3e-35 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 2e-34 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 3e-31 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 3e-09 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 6e-31 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 5e-30 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-29 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 6e-11 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-28 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 4e-13 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-08 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 1e-06 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 2e-06 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 3e-06 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 8e-06 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 1e-05 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 1e-05 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 4e-05 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 8e-05 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 8e-05 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 2e-04 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 3e-04 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 4e-04 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 5e-04 | |
| 2voy_D | 26 | Sarcoplasmic/endoplasmic reticulum calcium ATPase | 5e-04 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 5e-04 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 6e-04 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 6e-04 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 7e-04 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 7e-04 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 8e-04 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 1341 bits (3472), Expect = 0.0
Identities = 499/1059 (47%), Positives = 660/1059 (62%), Gaps = 86/1059 (8%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
ME A S + E+CL + V GL+ +V++ E+YG NEL E+GK LW+LV+EQ
Sbjct: 2 MEA----AHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQ 57
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
F+D LV+ILL+AA ISF+LA+F + G+ +VEP VI+LIL+ NAIVGVWQE NAE
Sbjct: 58 FEDLLVRILLLAACISFVLAWF---EEGEETITAFVEPFVILLILIANAIVGVWQERNAE 114
Query: 121 KALEALKKIQCESGKVLRDG-YLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSL 179
A+EALK+ + E GKV R V + A +VPGDIVE+ VGDKVPAD+R+ ++K+++L
Sbjct: 115 NAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTL 174
Query: 180 RVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIG 239
RV+QS LTGE++ ++K T PV Q K+NM+F+GT + G + IV TG++TEIG
Sbjct: 175 RVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIG 234
Query: 240 KIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPAN 299
KI+ Q+ E+ TPL++KLDEFG +L+ I L+C+ VW++N +F W
Sbjct: 235 KIRDQMAAT--EQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSW--- 289
Query: 300 VQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGC 359
YYFKIAVALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGC
Sbjct: 290 ----IRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGC 345
Query: 360 TTVICSDKTGTLTTNQMSVTEFFTLGR---KTTISRIFHVEGTTYDPK-----DGGIVDW 411
T+VICSDKTGTLTTNQMSV + F + + F + G+TY P+ + +
Sbjct: 346 TSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIR- 404
Query: 412 PCYNMDANLQAMAKICAVCNDAGVYCDG--PLFRATGLPTEAALKVLVEKMGFPDVKGRN 469
L +A ICA+CND+ + + ++ G TE AL LVEKM + + RN
Sbjct: 405 --SGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRN 462
Query: 470 KISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGH----- 524
+ A C + K+ TLEF R RKSMSV
Sbjct: 463 LSKVERANA------------CNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVG 510
Query: 525 NQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLS--RHLEMSSKGLRCLGMAYKD 582
N++ VKG+ E +++R ++V + VP+ P + +LS + LRCL +A +D
Sbjct: 511 NKMFVKGAPEGVIDRCNYV-RVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRD 569
Query: 583 ELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGI 642
+ L D S + E+DL FVGVVG+ DPPR V +I CR AGI
Sbjct: 570 ---------TPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGI 620
Query: 643 EVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS 702
V++ITGDNK TA AICR+I +F NE++ R++TG+EF L +Q EA + F+
Sbjct: 621 RVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRR--ACCFA 678
Query: 703 RAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLA 762
R EP HK +IV L+ E+ AMTGDGVNDAPALK A+IG+AMG +GT VAK AS+MVLA
Sbjct: 679 RVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLA 737
Query: 763 DDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVN 822
DDNF +IV+AV EGR+IYNNMK FIRY+ISSNVGEV+ IFLTAALG+PE LIPVQLLWVN
Sbjct: 738 DDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVN 797
Query: 823 LVTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWY 882
LVTDG PATALGFNP D+DIM +PPR + LI+ W+ RY+ IG YVG ATVG W+
Sbjct: 798 LVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWF 857
Query: 883 TKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIG 942
+ + VT QL ++ +C+ C+ F
Sbjct: 858 ---------MYAEDGPGVTYHQLTHFMQCTEDHPHFE-------------GLDCEIFEAP 895
Query: 943 KVKAMTLSLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPF 1002
+ MT++LSVLV IEM N+LN+LSE+ SL+ MPPW N WLL ++ +S+ LH LILYV
Sbjct: 896 --EPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDP 953
Query: 1003 LADVFGVVPLNLNEWFLVILVSAPVILIDEVLKFVGRNR 1041
L +F + L+L +W +V+ +S PVI +DE+LKF+ RN
Sbjct: 954 LPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNY 992
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 1034 bits (2676), Expect = 0.0
Identities = 281/1071 (26%), Positives = 463/1071 (43%), Gaps = 123/1071 (11%)
Query: 2 EEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQF 61
+E +V + ++Y KGLS+ + R G N L +G P + Q
Sbjct: 47 KEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQL 106
Query: 62 DDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEK 121
L ++ VAA I I +S+ + ++ L ++ ++V+ G +QE +
Sbjct: 107 AGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTN 166
Query: 122 ALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRV 181
+ + K + + V+RDG + A LV GD+VE+ GD+VPAD+R+ L+ +V
Sbjct: 167 IIASFKNLVPQQATVIRDGDKF-QINADQLVVGDLVEMKGGDRVPADIRI--LQAQGRKV 223
Query: 182 EQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKI 241
+ SSLTGE+ P + SP + L+ + N+ F T + G+ +V+NTG T IG+I
Sbjct: 224 DNSSLTGESEPQTR--SPECTHESPLETR-NIAFFSTMCLEGTAQGLVVNTGDRTIIGRI 280
Query: 242 QKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQ 301
+ +E TP+ +++ F + + L +I+ + + +
Sbjct: 281 ASLA--SGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAM--CIGYTFLRA------ 330
Query: 302 FSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTT 361
+A+ VA +PEGL A +T CL+L +++A KN +V+ L +VETLG T+
Sbjct: 331 ---------MVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTS 381
Query: 362 VICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQ 421
VICSDKTGTLT N+M+V+ + + G T+D +
Sbjct: 382 VICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSS------------ETWR 429
Query: 422 AMAKICAVCNDAGVYCDGPLF-----RATGLPTEAALKVLVEKMGFPDVKGRNKISDTQL 476
A+ ++ +CN A G +E AL E
Sbjct: 430 ALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTL--------------- 474
Query: 477 AANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQ---LLVKGSV 533
++ R +R +V + F+ K I + L++KG+
Sbjct: 475 -----GNAMGYR--------ERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAP 521
Query: 534 ESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSE 593
E +LER S + L G +PLDE + + +L + G R LG SE
Sbjct: 522 ERVLERCSSI-LIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLY--------LSE 572
Query: 594 SHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKS 653
D + S L F G+V + DPPR V A+ CR AGI V+++TGD+
Sbjct: 573 KDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPI 632
Query: 654 TAEAICRQIKLFSGN--------------------EDLTGRSFTGKEFMALSSTQQIEAL 693
TA+AI + + S +D G + + ++ +EAL
Sbjct: 633 TAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEAL 692
Query: 694 SKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVA 753
H VF+R P+ K IV + +G +VA+TGDGVND+PALK ADIGVAMGI G++ A
Sbjct: 693 RTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAA 752
Query: 754 KEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECL 813
K A+DM+L DDNF SIV+ V +GR I++N+K I Y ++ N+ E+ + + +P L
Sbjct: 753 KNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPL 812
Query: 814 IPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVLL--RYLVIGSYVG 871
+ +L++ L TD P+ +L + A+ DIM PR + + L Y IG+
Sbjct: 813 GCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQS 872
Query: 872 IATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMIT 931
A + + + + VG W N + GQ T
Sbjct: 873 FAGFTDYFTAMAQEGWFPLLCVGLR---------------PQWENHHLQDLQDSYGQEWT 917
Query: 932 FSNPCDYFTIGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSL 991
F + T+ + ++ + L + S +RN L++A+ +
Sbjct: 918 FGQR----LYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQV 973
Query: 992 GLHCLILYVPFLADVFGVVPLNLNEWFLVILVSAPVILIDEVLKFVGRNRR 1042
+ C + Y P + ++F +P+ W + + + + DE+ K R
Sbjct: 974 CIGCFLCYCPGMPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCCP 1024
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 987 bits (2555), Expect = 0.0
Identities = 276/1063 (25%), Positives = 472/1063 (44%), Gaps = 124/1063 (11%)
Query: 10 SWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKIL 69
++++ +Y L +GL++ ++ R G N L P W Q +L
Sbjct: 50 KLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILL 109
Query: 70 LVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKI 129
+ A + F+ ++ + ++ +V+ ++++ +QE+ + + +++ K +
Sbjct: 110 WIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNM 169
Query: 130 QCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGE 189
+ V+RDG + A +V GD+VE+ GD++PAD+R+ + +V+ SSLTGE
Sbjct: 170 VPQQALVIRDGEKS-TINAEFVVAGDLVEVKGGDRIPADLRI--ISAHGCKVDNSSLTGE 226
Query: 190 AMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDAS 249
+ P + SP F + L+ + N+ F T V G+ +V+ TG T +G+I +
Sbjct: 227 SEPQTR--SPEFSSENPLETR-NIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLA--SG 281
Query: 250 LEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTY 309
LE TP+ +++ F + +T + + +I++ L + ++
Sbjct: 282 LEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSL--ILGYSWLEA-------------- 325
Query: 310 YFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTG 369
+ + VA +PEGL A +T CL L ++MA+KN +V+ L +VETLG T+ ICSDKTG
Sbjct: 326 -VIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTG 384
Query: 370 TLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAV 429
TLT N+M+V + + I + T G D A A+++I A+
Sbjct: 385 TLTQNRMTVAHMWFDNQ------IHEADTTENQS--GAAFDKT----SATWSALSRIAAL 432
Query: 430 CNDAGVYCDGPLF-----RATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDS 484
CN A G +E+AL +E
Sbjct: 433 CNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCC--------------------GSV 472
Query: 485 STVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQ---LLVKGSVESLLERSS 541
+R R+ ++ + F+ K I L++KG+ E +L+R S
Sbjct: 473 QGMR--------DRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCS 524
Query: 542 HVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKL 601
+ L +G+ PL E + + +LE+ G R LG + E
Sbjct: 525 TI-LLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFA--------LPEDKYNEGYP 575
Query: 602 LDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ 661
D + +DL FVG++ + DPPR V A+ CR AGI+V+++TGD+ TA+AI +
Sbjct: 576 FDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG 635
Query: 662 IKLFSGN--------------------EDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701
+ + S D G + LS+ + L H VF
Sbjct: 636 VGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVF 695
Query: 702 SRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVL 761
+R P+ K IV + G +VA+TGDGVND+PALK ADIGVAMGI+G++V+K+A+DM+L
Sbjct: 696 ARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMIL 755
Query: 762 ADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWV 821
DDNF SIV+ V EGR I++N+K I Y ++SN+ E+ + +P L V +L +
Sbjct: 756 LDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCI 815
Query: 822 NLVTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVLLR--YLVIGSYVGIATVGIFV 879
+L TD PA +L + A+ DIM++ PR + + L+ Y IG + +
Sbjct: 816 DLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYF 875
Query: 880 LWYTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYF 939
+ + F+ ++L+G W + ++ GQ T+
Sbjct: 876 VILAENGFLPMDLIGKR---------------VRWDDRWISDVEDSFGQQWTYEQR---- 916
Query: 940 TIGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILY 999
I + T +V ++ + + + NS+ +N L+ + L + Y
Sbjct: 917 KIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQ-GMKNKILIFGLFEETALAAFLSY 975
Query: 1000 VPFLADVFGVVPLNLNEWFLVILVSAPVILIDEVLKFVGRNRR 1042
P + PL + WF S + L DE+ +F+ R
Sbjct: 976 CPGTDVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRRSP 1018
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 738 bits (1908), Expect = 0.0
Identities = 232/1048 (22%), Positives = 391/1048 (37%), Gaps = 206/1048 (19%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
++ + +E+ ++ + GL+++E E R + +G N+L +EK + L
Sbjct: 7 IKNETVDLEKIPIEEVFQQLKCSRE-GLTTQEGEDRIQIFGPNKL-EEKKESKLLKFLGF 64
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
+ L ++ +AA ++ LA D+ + + I+ +LV+N+ + +E+NA
Sbjct: 65 MWNPLSWVMEMAAIMAIALANGDGRP------PDWQDFVGIICLLVINSTISFIEENNAG 118
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
A AL KVLRDG + A LVPGDIV + +GD +PAD R+ L+ L+
Sbjct: 119 NAAAALMAGLAPKTKVLRDGKWS-EQEAAILVPGDIVSIKLGDIIPADARL--LEGDPLK 175
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
V+QS+LTGE++P+ K VF+G+T G +VI TG++T GK
Sbjct: 176 VDQSALTGESLPVTKHP-------------GQEVFSGSTCKQGEIEAVVIATGVHTFFGK 222
Query: 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWI-MNYRNFLSWDVVDGWPAN 299
+ +K L GN +I + ++ I M DG
Sbjct: 223 AAHLVDST---NQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYP--IQRRKYRDG---- 273
Query: 300 VQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGC 359
+ L + IP +P V++ +A+G+ +++Q+ AI +++ ++E +
Sbjct: 274 -----------IDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 322
Query: 360 TTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDAN 419
V+CSDKTGTLT N++SV + V +
Sbjct: 323 MDVLCSDKTGTLTLNKLSVDKNLV-----------EVFCKGVEKDQ-------------- 357
Query: 420 LQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAAN 479
+ A+ + +AA+ ++ + A
Sbjct: 358 ---VLLFAAMASRV----------ENQDAIDAAMVGMLADPK-------------EARAG 391
Query: 480 YLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLER 539
+ V L F+ + K ++ + +G+ + KG+ E +LE
Sbjct: 392 I-------------------REVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILEL 432
Query: 540 SSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHK 599
+ +LS + + +GLR L +A +
Sbjct: 433 -----------AKASNDLSKKVLSIIDKYAERGLRSLAVARQV----------------- 464
Query: 600 KLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAIC 659
+ + + FVG++ L DPPR + I G+ V +ITGD + +
Sbjct: 465 --VPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG 522
Query: 660 RQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEM 719
R++ + N + + L+S E + K F+ P HK EIV+ L+E
Sbjct: 523 RRLGM-GTNMYPSSALLGTHKDANLASIPVEELIEKAD--GFAGVFPEHKYEIVKKLQER 579
Query: 720 GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSI 779
+V MTGDGVNDAPALK ADIG+A+ T+ A+ ASD+VL + I+SAV R+I
Sbjct: 580 KHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAI 638
Query: 780 YNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPAD 839
+ MK + Y +S + V L AL +L + ++ DG + +
Sbjct: 639 FQRMKNYTIYAVSITIRIVFGFML-IALIWEFDFSAFMVLIIAILNDG-TIMTISKDRVK 696
Query: 840 VDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTL 899
P I +V+G Y I TV F + F
Sbjct: 697 PSPT---PDSWKLKEI----FATGVVLGGYQAIMTVIFFWAAHKTDFF------------ 737
Query: 900 VTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEM 959
F V + M + I
Sbjct: 738 --------------SDTFGVRSIRDNNHE-----------------LMGAVYLQVSIISQ 766
Query: 960 FNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFL 1019
S S V P L++A ++ + LI V + + + +
Sbjct: 767 ALIFVTRSRSWSFVERP---GALLMIAFLIAQLIATLI-AVYANWEFAKIRGIGWGWAGV 822
Query: 1020 VILVSAPVILIDEVLKFVGRNRRLSGKK 1047
+ L S +V KF R LSGK
Sbjct: 823 IWLYSIVTYFPLDVFKFAIR-YILSGKA 849
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 706 bits (1824), Expect = 0.0
Identities = 224/1056 (21%), Positives = 401/1056 (37%), Gaps = 232/1056 (21%)
Query: 2 EEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQF 61
EE E L+ GL+S EV +RR +YG N++ +EK + + L F
Sbjct: 65 EEATPGGGRVVPEDMLQ---TDTRVGLTSEEVVQRRRKYGLNQMKEEK-ENHFLKFLGFF 120
Query: 62 DDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEK 121
+ ++ AA ++ L ED+V+ VI +L+LNA+VG QE A
Sbjct: 121 VGPIQFVMEGAAVLAAGL-------------EDWVDFGVICGLLLLNAVVGFVQEFQAGS 167
Query: 122 ALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRV 181
++ LKK VLRDG L ++ A +VPGDI+++ G +PAD R+ + L+V
Sbjct: 168 IVDELKKTLALKAVVLRDGTLK-EIEAPEVVPGDILQVEEGTIIPADGRIVT-DDAFLQV 225
Query: 182 EQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKI 241
+QS+LTGE++ + K + VFA + V G ++ TG NT +G+
Sbjct: 226 DQSALTGESLAVDKHK-------------GDQVFASSAVKRGEAFVVITATGDNTFVGRA 272
Query: 242 QKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQ 301
++ A + L+ G L + L+VW+ ++ + S +V
Sbjct: 273 AALVNAA--SGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSF--YRSNPIVQI------ 322
Query: 302 FSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTT 361
+ +A+ + +P GLPAV+TT +A+G +A+K AIV+KL ++E+L
Sbjct: 323 ---------LEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVE 373
Query: 362 VICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQ 421
++CSDKTGTLT N++S+ + + V G DP+D
Sbjct: 374 ILCSDKTGTLTKNKLSLHD------------PYTVAG--VDPED---------------- 403
Query: 422 AMAKICAVCNDAGVYCDGPLFRATGL--PTEAALKVLVEKMGFPDVKGRNKISDTQLAAN 479
+ + R + A ++ + +
Sbjct: 404 -LMLTACLAAS----------RKKKGIDAIDKAFLKSLKYYPRAK----------SVLSK 442
Query: 480 YLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLER 539
Y K + FD + K + +V P G VKG+ +L+
Sbjct: 443 Y-------------------KVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKT 483
Query: 540 SSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHK 599
P+ E Q ++ E +++G R LG+A K
Sbjct: 484 VEEDH-------PIPEEVDQAYKNKVAEFATRGFRSLGVARKRG---------------- 520
Query: 600 KLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAIC 659
E +G++ DPPR K + + + G+ + ++TGD A
Sbjct: 521 -----------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETS 569
Query: 660 RQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEM 719
RQ+ L G + ++ + + F+ P+HK +V +L++
Sbjct: 570 RQLGL--GTNIYNAERLGLGGGGDMPGSEVYDFVEAAD--GFAEVFPQHKYNVVEILQQR 625
Query: 720 GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSI 779
G +VAMTGDGVNDAP+LK AD G+A+ ++ A+ A+D+V G+I+ A+ R I
Sbjct: 626 GYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQI 684
Query: 780 YNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPAD 839
++ M A++ Y I+ ++ I + L + L ++++ + D A+ ++ A
Sbjct: 685 FHRMYAYVVYRIALSIHLEIFLGL-WIAILNRSLNIELVVFIAIFADV-ATLAIAYDNAP 742
Query: 840 VDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTL 899
P K + + +++G + + T Y +G GI
Sbjct: 743 YSQT---PVKWNLPKL----WGMSVLLGVVLAVGTWITVTTMYAQGENGGIVQ------- 788
Query: 900 VTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEM 959
N+G + + E
Sbjct: 789 -------NFGN-----------------------------------MDEVLFLQISLTEN 806
Query: 960 FNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFL 1019
+ + ++P + L A+ + L + F ++
Sbjct: 807 WLIFITRANGPFWSSIP---SWQLSGAIFLVDILATCFTIWGW----FEHSDTSIVAVVR 859
Query: 1020 VILVSAPVILIDEVLKFVGR-----NRRLSGKKEKT 1050
+ + S + I + ++ + + + GK K
Sbjct: 860 IWIFSFGIFCIMGGVYYILQDSVGFDNLMHGKSPKG 895
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 3e-35
Identities = 37/169 (21%), Positives = 78/169 (46%), Gaps = 34/169 (20%)
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRS 675
+ + D PR + ++ + G+++++++GD + + + +++ +
Sbjct: 127 PIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI----------- 175
Query: 676 FTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPA 735
+E+ + P K I+ LK+ G V M GDGVNDA A
Sbjct: 176 ---QEYYS-------NLS------------PEDKVRIIEKLKQNGNKVLMIGDGVNDAAA 213
Query: 736 LKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMK 784
L LAD+ VAMG G +++K +D++L ++ G+++ + + + N +
Sbjct: 214 LALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 2e-34
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 40/179 (22%)
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRS 675
GV+ L D R +AI + GI+ M++TGDN+ A+ + ++ L
Sbjct: 135 VSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL----------- 183
Query: 676 FTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPA 735
++ A E L P K E V+ +++ V AM GDGVNDAPA
Sbjct: 184 ---DDYFA-------EVL------------PHEKAEKVKEVQQ-KYVTAMVGDGVNDAPA 220
Query: 736 LKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMK-----AFIRY 789
L AD+G+A+G GT+VA E +D+VL ++ + + V R Y+ + ++
Sbjct: 221 LAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHPQF 278
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 3e-31
Identities = 59/177 (33%), Positives = 89/177 (50%), Gaps = 39/177 (22%)
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRS 675
V ++ + DP + + I + + +GIE++++TGD+K TAEA+ + +
Sbjct: 545 TVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI----------- 593
Query: 676 FTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPA 735
K+ +A E + P K IV LK+ G +VAM GDGVNDAPA
Sbjct: 594 ---KKVVA-------EIM------------PEDKSRIVSELKDKGLIVAMAGDGVNDAPA 631
Query: 736 LKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMK-----AFI 787
L ADIG+AMG TGT+VA E++ + L + I A S +N++ AFI
Sbjct: 632 LAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFI 687
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 3e-09
Identities = 76/345 (22%), Positives = 133/345 (38%), Gaps = 70/345 (20%)
Query: 63 DTLVKILLVAAFI-----SFILAYFHSSDSGDSGFED-YVEPLVIVLILVLNAIVGVWQE 116
TL+ + + A+I F + G Y E ++ LVL +G E
Sbjct: 149 FTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAAVITTLVL---LGQVLE 205
Query: 117 SNAE----KALEALKKIQCES-GKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRV 171
A A+ AL K+ ES ++ DG ++ + GD++ + G+K+P D V
Sbjct: 206 LKAREQTGSAIRALLKLVPESAHRIKEDGSEE-EVSLDNVAVGDLLRVRPGEKIPVDGEV 264
Query: 172 AALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVIN 231
++ V++S +TGE +P+ K V T GS V ++
Sbjct: 265 QEGRSF---VDESMVTGEPIPVAKEA-----SA--------KVIGATINQTGSFVMKALH 308
Query: 232 TGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTT-------AIGLVCLVVWIMNY 284
G +T + +I + + DA S P+++ D ++ + ++ +VW
Sbjct: 309 VGSDTMLARIVQMVSDAQ--RSRAPIQRLAD----TVSGWFVPAVILVAVLSFIVWA--- 359
Query: 285 RNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIP--EGL--PAVITTCLALGTRK 340
++ PA +Y AV++ + A P GL P I G K
Sbjct: 360 -------LLGPQPA--------LSYGLIAAVSVLIIACPCALGLATPMSIMV----GVGK 400
Query: 341 MAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLG 385
AQ +++ ++E + + DKTGTLT +T T
Sbjct: 401 GAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDD 445
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 6e-31
Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 35/169 (20%)
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRS 675
G++ + D + A+ + + GI+V +ITGDN +AEAI R++ L
Sbjct: 154 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----------- 202
Query: 676 FTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPA 735
+A E L P K E V+ L+ EVVA GDG+NDAPA
Sbjct: 203 ---DLVIA-------EVL------------PHQKSEEVKKLQA-KEVVAFVGDGINDAPA 239
Query: 736 LKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMK 784
L AD+G+A+G +G++VA E+ D+VL D+ +V+A+ R + +K
Sbjct: 240 LAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 5e-30
Identities = 41/185 (22%), Positives = 72/185 (38%), Gaps = 49/185 (26%)
Query: 445 TGL--PTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRV 502
TGL + A+ ++ LA+ + +++
Sbjct: 30 TGLKNLLDTAVLEGTDEESARS-----------LASRW-------------------QKI 59
Query: 503 ATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLML 562
+ FD R+ MSV+V E T H+QL+ KG+++ +L S V+ +G +VPLD+ + +
Sbjct: 60 DEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRH-NGEIVPLDDIMLRKIK 118
Query: 563 SRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGL 622
++ +GLR + +A K DY ESDL+ G +
Sbjct: 119 RVTDTLNRQGLRVVAVATKYLPAREGDYQRA----------------DESDLILEGYIAF 162
Query: 623 RDPPR 627
D
Sbjct: 163 LDHHH 167
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 2e-29
Identities = 57/177 (32%), Positives = 87/177 (49%), Gaps = 40/177 (22%)
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRS 675
G++ + D + A+ + + GI+V +ITGDN +AEAI R++ L
Sbjct: 448 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----------- 496
Query: 676 FTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPA 735
+A E L P K E V+ L+ EVVA GDG+NDAPA
Sbjct: 497 ---DLVIA-------EVL------------PHQKSEEVKKLQA-KEVVAFVGDGINDAPA 533
Query: 736 LKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMK-----AFI 787
L AD+G+A+G +G++VA E+ D+VL D+ +V+A+ R + +K A I
Sbjct: 534 LAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALI 589
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 65.6 bits (161), Expect = 6e-11
Identities = 77/338 (22%), Positives = 135/338 (39%), Gaps = 68/338 (20%)
Query: 63 DTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNA-EK 121
D + + + AAF++ +L+ S +E L++ +L+ G E+ A +
Sbjct: 67 DVMYSMGVGAAFLASVLSTAGVLPREYSFYE--TSVLLLAFLLL-----GRTLEARAKSR 119
Query: 122 ALEALKK---IQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSS 178
EA+KK +Q ++ V+RDG + +P + GDIV + G+K+P D V ++
Sbjct: 120 TGEAIKKLVGLQAKTAVVIRDGKEI-AVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY- 177
Query: 179 LRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEI 238
V++S ++GE +P+LK D VF T G G T +
Sbjct: 178 --VDESMISGEPVPVLKSK-----GD--------EVFGATINNTGVLKIRATRVGGETLL 222
Query: 239 GKIQKQIHDASLEESDTPLRKKLDEFGNRLTT-------AIGLVCLVVWIMNYRNFLSWD 291
+I K + DA S P+++ D ++ + + + W
Sbjct: 223 AQIVKLVEDAM--GSKPPIQRLAD----KVVAYFIPTVLLVAISAFIYWYF--------- 267
Query: 292 VVDGWPANVQFSFEKCTYYFKIAVALAVAAIP--EGL--PAVITTCLALGTRKMAQKNAI 347
+ + F +A+ V A P GL P +T G K A+ +
Sbjct: 268 ----------IAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTV----GMGKGAELGIL 313
Query: 348 VRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLG 385
++ ++E T + DKTGTLT + VT+ L
Sbjct: 314 IKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLN 351
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 1e-28
Identities = 57/177 (32%), Positives = 87/177 (49%), Gaps = 40/177 (22%)
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRS 675
G++ + D + A+ + + GI+V +ITGDN +AEAI R++ L
Sbjct: 526 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----------- 574
Query: 676 FTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPA 735
+A E L P K E V+ L+ EVVA GDG+NDAPA
Sbjct: 575 ---DLVIA-------EVL------------PHQKSEEVKKLQA-KEVVAFVGDGINDAPA 611
Query: 736 LKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMK-----AFI 787
L AD+G+A+G +G++VA E+ D+VL D+ +V+A+ R + +K A I
Sbjct: 612 LAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALI 667
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 72.9 bits (180), Expect = 4e-13
Identities = 80/338 (23%), Positives = 140/338 (41%), Gaps = 68/338 (20%)
Query: 63 DTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNA-EK 121
D + + + AAF++ +L+ S +E L++ +L+ G E+ A +
Sbjct: 145 DVMYSMGVGAAFLASVLSTAGVLPREYSFYE--TSVLLLAFLLL-----GRTLEARAKSR 197
Query: 122 ALEALKK---IQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSS 178
EA+KK +Q ++ V+RDG + +P + GDIV + G+K+P D V ++
Sbjct: 198 TGEAIKKLVGLQAKTAVVIRDGKEI-AVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY- 255
Query: 179 LRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEI 238
V++S ++GE +P+LK D VF T G G T +
Sbjct: 256 --VDESMISGEPVPVLKSK-----GD--------EVFGATINNTGVLKIRATRVGGETLL 300
Query: 239 GKIQKQIHDASLEESDTPLRKKLDEFGNRLTT-------AIGLVCLVVWIMNYRNFLSWD 291
+I K + DA S P+++ D ++ + + + W F++
Sbjct: 301 AQIVKLVEDAM--GSKPPIQRLAD----KVVAYFIPTVLLVAISAFIYWY-----FIA-- 347
Query: 292 VVDGWPANVQFSFEKCTYYFKIAVALAVAAIP--EGL--PAVITTCLALGTRKMAQKNAI 347
A + F+F +A+ V A P GL P +T G K A+ +
Sbjct: 348 -----HAPLLFAFT-------TLIAVLVVACPCAFGLATPTALTV----GMGKGAELGIL 391
Query: 348 VRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLG 385
++ ++E T + DKTGTLT + VT+ L
Sbjct: 392 IKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLN 429
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.8 bits (136), Expect = 3e-08
Identities = 93/679 (13%), Positives = 196/679 (28%), Gaps = 224/679 (32%)
Query: 13 VEQCLKEY--NVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILL 70
V+ K ++D + S++ R W L K++ ++++F V+ +L
Sbjct: 38 VQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEE------MVQKF----VEEVL 87
Query: 71 VAAFISFILAYFHSSDSGDSG----FEDYVEPL--VIVLILVLNAIVGVWQESNAEKALE 124
+ F+++ + S + + + L + N V + K +
Sbjct: 88 RINY-KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYN----VSRLQPYLKLRQ 142
Query: 125 ALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQS 184
AL +++ ++ G+ LG G K +
Sbjct: 143 ALLELRPAKNVLID-----------GV-------LGSG------------K--------T 164
Query: 185 SLTGEAMPILKGTSPVFLDDCELQAK-ENMVFAGTTVVN-GSCVCIVINTGMNTEIGKIQ 242
+ + ++Q K + +F +N +C T + +Q
Sbjct: 165 WVALDV-----------CLSYKVQCKMDFKIFW----LNLKNCNSP------ETVLEMLQ 203
Query: 243 KQIHD-----ASLEESDTPLRKKLDEFGNRLTTAIGL----VCLVVWIMNYRNFLSWDVV 293
K ++ S + + ++ ++ L + CL+V L +V
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV--------LL-NVQ 254
Query: 294 DGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPS 353
+ N F+ C KI + + + L A TT ++L M L
Sbjct: 255 NAKAWNA-FNL-SC----KILLTTRFKQVTDFLSAATTTHISLDHHSMT--------LTP 300
Query: 354 VETLG----CTTVICSD-KTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGI 408
E D LTTN ++ I+ T+D
Sbjct: 301 DEVKSLLLKYLDCRPQDLPREVLTTNPRRLS---------IIAESIRDGLATWDN----- 346
Query: 409 VDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGL-PTEAALKVLVEKMG-FP-DV 465
W N D + I + L P E + + +++ FP
Sbjct: 347 --WKHVNCDK----LTTIIESSLNV-------------LEPAE--YRKMFDRLSVFPPSA 385
Query: 466 K----------GRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMS 515
SD + N L S V + + + + ++ + K +
Sbjct: 386 HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE----KQPKESTISIPSIYLELKVKLEN 441
Query: 516 VIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLE-------- 567
E H + V+ + D LD+ + + HL+
Sbjct: 442 ----EYALHRSI-----VDHYNIPKTF-DSDDLIPPYLDQ-YFYSHIGHHLKNIEHPERM 490
Query: 568 ------------MSSKGLRCLGMAYK------DELGEF---SDYYSESHPAHKKLLD--- 603
+ K +R A+ + L + Y ++ P +++L++
Sbjct: 491 TLFRMVFLDFRFLEQK-IRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAIL 549
Query: 604 -------PSCYSTIESDLV 615
+ + +DL+
Sbjct: 550 DFLPKIEENLICSKYTDLL 568
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.8 bits (136), Expect = 4e-08
Identities = 70/528 (13%), Positives = 141/528 (26%), Gaps = 172/528 (32%)
Query: 506 EFDRIRKSMSVIVREPTGHNQLLVKGSVESLLER-SSHVQLADGSVVPLDEPCWQLMLSR 564
E D I + + L +LL + VQ V+ ++ + LM
Sbjct: 50 EIDHI-------IMSKDAVSGTLR--LFWTLLSKQEEMVQKFVEEVLRINYK-F-LMSPI 98
Query: 565 HLEMSSKGL-RCLGMAYKDELG----EFSDYYSESHPAHKKL------LDPSCYSTIESD 613
E + + + +D L F+ Y + KL L P+
Sbjct: 99 KTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKN------ 152
Query: 614 LVFVGVVGLRDPPRGGVDK---AIDDCRGAGIEVMV------ITGDNKSTAEAICRQIKL 664
V + G+ G K A+D C ++ + + N ++ E + ++
Sbjct: 153 ---VLIDGV-----LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQK 204
Query: 665 FSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR---AEPRHKQEIVRMLKEMGE 721
D + + S L H + R ++ L
Sbjct: 205 LLYQID--------PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE----NCL----- 247
Query: 722 VVAMTGDGVNDAPALKLADIG--------------VAMGITGTEVAKEASDMVLADDN-- 765
+V V +A A ++ T T ++ + M L D
Sbjct: 248 LVL---LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK 304
Query: 766 --FGSI-------------------VSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLT 804
+S +AE +++ + +I L
Sbjct: 305 SLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364
Query: 805 A-----------ALGI-PE-CLIPVQLL---WVNLVTDGPPATALGF--------NPADV 840
L + P IP LL W +++ P +
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKES 424
Query: 841 -----DIMQKPPRKIDD------ALINSWVLLR--------------YLVIGSYVG---- 871
I + K+++ ++++ + + + Y S++G
Sbjct: 425 TISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQY--FYSHIGHHLK 482
Query: 872 ----IATVGIFVLWYTKGSFM-------GINLVGDGHTLVTLPQLRNW 908
+ +F + + F+ G L TL QL+ +
Sbjct: 483 NIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFY 530
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 49.8 bits (119), Expect = 1e-06
Identities = 24/123 (19%), Positives = 34/123 (27%), Gaps = 15/123 (12%)
Query: 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS---GNEDLTGRSFTGKEF 681
R G + + I VI+G + I N F
Sbjct: 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHAS----FDNDYI 132
Query: 682 MALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI 741
S G K ++ L E + + M GD V D A KL+D+
Sbjct: 133 HIDWPHSCKGTCSNQCGCC--------KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDL 184
Query: 742 GVA 744
A
Sbjct: 185 CFA 187
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 46.7 bits (112), Expect = 2e-06
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 17/127 (13%)
Query: 122 ALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRV 181
A++ L +Q ++ V+RDG + +P + GDIV + G+K+P D V ++ V
Sbjct: 2 AIKKLVGLQAKTAVVIRDGKEI-AVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY---V 57
Query: 182 EQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKI 241
++S ++GE +P+LK + VF T G G T + +I
Sbjct: 58 DESMISGEPVPVLKSKG-------------DEVFGATINNTGVLKIRATRVGGETLLAQI 104
Query: 242 QKQIHDA 248
K + DA
Sbjct: 105 VKLVEDA 111
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 3e-06
Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 6/58 (10%)
Query: 712 IVRMLKEMG----EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDN 765
+ ++ + E++ + GD ND P +L T+ K SD V
Sbjct: 158 VNKLKEMYSLEYDEILVI-GDSNNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSY 213
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 Length = 231 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 8e-06
Identities = 21/92 (22%), Positives = 33/92 (35%), Gaps = 15/92 (16%)
Query: 678 GKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG----EVVAMTGDGVNDA 733
+A+ S I K I + + +G EV + GDG ND
Sbjct: 133 NLNLVAVDSGFAIHVKKPWINKGSG---------IEKASEFLGIKPKEVAHV-GDGENDL 182
Query: 734 PALKLADIGVAMGITGTEVAKEASDMVLADDN 765
A K+ VA+ ++ KE +D V +
Sbjct: 183 DAFKVVGYKVAVA-QAPKILKENADYVTKKEY 213
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A Length = 258 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 1e-05
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 15/75 (20%)
Query: 690 IEALSKHGGKVFSRAEPRHKQEIVRMLKEMG----EVVAMTGDGVNDAPALKLADIGVAM 745
+ L G K I M++++G +V A GDG+ND L GVAM
Sbjct: 175 TDVLPAGGSKAEG---------IRMMIEKLGIDKKDVYAF-GDGLNDIEMLSFVGTGVAM 224
Query: 746 GITGTEVAKEASDMV 760
G E K +D V
Sbjct: 225 GN-AHEEVKRVADFV 238
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A Length = 261 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 1e-05
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 15/75 (20%)
Query: 690 IEALSKHGGKVFSRAEPRHKQEIVRMLKEMG----EVVAMTGDGVNDAPALKLADIGVAM 745
+ +K K I +++ G E ++ GDG ND L+ A IGVAM
Sbjct: 179 ADVTAKGDTKQKG---------IDEIIRHFGIKLEETMSF-GDGGNDISMLRHAAIGVAM 228
Query: 746 GITGTEVAKEASDMV 760
G E K A+D V
Sbjct: 229 GQ-AKEDVKAAADYV 242
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} Length = 268 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 4e-05
Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 15/75 (20%)
Query: 690 IEALSKHGGKVFSRAEPRHKQEIVRMLKEMG----EVVAMTGDGVNDAPALKLADIGVAM 745
+ K + E++A GDG ND P LK A IGVAM
Sbjct: 186 ADVNVAGTSKATG---------LSLFADYYRVKVSEIMAC-GDGGNDIPMLKAAGIGVAM 235
Query: 746 GITGTEVAKEASDMV 760
G +E + +D V
Sbjct: 236 GN-ASEKVQSVADFV 249
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 Length = 301 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 8e-05
Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDN 765
+V+ + GD ND L A+ T+ AK + VL +
Sbjct: 242 QVLVV-GDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSH 284
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} Length = 274 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 8e-05
Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Query: 712 IVRMLKEMG----EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDN 765
I R+ + +G E + GDG ND + +D+ +AM + K+ + + +D
Sbjct: 205 IKRLQERLGVTQKETICF-GDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSI-CEDI 259
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 40.9 bits (97), Expect = 2e-04
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Query: 122 ALEALKKIQCESGKVLRDGYLVP-----DLPAIGLVPGDIVELGVGDKVPADMRVAALKT 176
AL L +Q ++ + + GDI+++ G K P D RV +
Sbjct: 8 ALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS 67
Query: 177 SSLRVEQSSLTGEAMPILKG 196
V++S +TGEAMP+ K
Sbjct: 68 M---VDESLITGEAMPVAKK 84
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} Length = 279 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 3e-04
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDN 765
+V+ + GD ND +K A +GVAMG + KEA+ V N
Sbjct: 215 DVMTL-GDQGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAV-TLTN 256
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} Length = 289 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 4e-04
Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 8/63 (12%)
Query: 708 HKQEIVRMLKE-----MGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLA 762
K EIV + E +A GD ND L+ G + T+ AK +++
Sbjct: 211 GKNEIVTFMLEKYNLNTERAIAF-GDSGNDVRMLQTVGNGYLLK-NATQEAKNLHNLI-T 267
Query: 763 DDN 765
D
Sbjct: 268 DSE 270
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 Length = 268 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 5e-04
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDN 765
E+V GD ND + A + VAM E KEASD+V N
Sbjct: 208 EIVVF-GDNENDLFMFEEAGLRVAME-NAIEKVKEASDIV-TLTN 249
|
| >2voy_D Sarcoplasmic/endoplasmic reticulum calcium ATPase 1; hydrolasep-type ATPase, cryo-EM, helical reconstruction, membrane protein; 17.50A {Oryctolagus cuniculus} Length = 26 | Back alignment and structure |
|---|
Score = 37.3 bits (86), Expect = 5e-04
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 858 WVLLRYLVIGSYVGIATVGIFV 879
W+ RY+ IG YVG ATVG
Sbjct: 1 WLFFRYMAIGGYVGAATVGAAA 22
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 Length = 288 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 5e-04
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDN 765
E A+ GD +ND L+ A GVAMG E K +D V N
Sbjct: 234 ETAAV-GDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAV-TLTN 275
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 Length = 282 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 6e-04
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDN 765
E++A+ GD ND ++ A +GVA+ KE ++ V N
Sbjct: 216 EIMAI-GDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFV-TKSN 257
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 6e-04
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Query: 709 KQEIVRMLKE---MGEVVAMTGDGVNDAPALKLADIGVAMG--ITGTEVAKEA 756
K +++++LKE +++ + GDG D A AD + G + +V A
Sbjct: 158 KGKVIKLLKEKFHFKKIIMI-GDGATDMEACPPADAFIGFGGNVIRQQVKDNA 209
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} Length = 283 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 7e-04
Identities = 11/45 (24%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDN 765
EV GD +ND L+ A I A+ + A+
Sbjct: 229 EVCCF-GDNLNDIEMLQNAGISYAVS-NARQEVIAAAKHT-CAPY 270
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} Length = 290 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 7e-04
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 712 IVRMLKEMG----EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMV 760
+ + E+G +VVA+ G +D P ++LA +GVAMG K +D V
Sbjct: 207 LALVASELGLSMDDVVAI-GHQYDDLPMIELAGLGVAMG-NAVPEIKRKADWV 257
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A Length = 279 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 8e-04
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDN 765
EV+A+ GDG ND +K A +GVAMG E K+A+D + N
Sbjct: 215 EVIAI-GDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYI-TLTN 256
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1051 | ||||
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 7e-60 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 4e-32 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 5e-22 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 2e-41 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 3e-40 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 3e-37 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 2e-32 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 5e-26 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 5e-25 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 4e-17 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 2e-08 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 4e-07 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 1e-06 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 1e-06 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 9e-06 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 1e-05 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 2e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 2e-05 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 6e-05 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 7e-05 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 1e-04 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 5e-04 | |
| d2bdua1 | 291 | c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III | 7e-04 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 0.002 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 211 bits (537), Expect = 7e-60
Identities = 141/307 (45%), Positives = 187/307 (60%), Gaps = 31/307 (10%)
Query: 734 PALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISS 793
P A I + + +AK+ + + S+ S GR+IYNNMK FIRY+ISS
Sbjct: 193 PEGLPAVITTCLALGTRRMAKKNAIVR-------SLPSVETLGRAIYNNMKQFIRYLISS 245
Query: 794 NVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKIDDA 853
NVGEV+ IFLTAALG+PE LIPVQLLWVNLVTDG PATALGFNP D+DIM +PPR +
Sbjct: 246 NVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEP 305
Query: 854 LINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQLRNWGECST 913
LI+ W+ RY+ IG YVG ATVG W+ + + VT QL ++ +C+
Sbjct: 306 LISGWLFFRYMAIGGYVGAATVGAAAWWF---------MYAEDGPGVTYHQLTHFMQCTE 356
Query: 914 WSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLV 973
C+ F + MT++LSVLV IEM N+LN+LSE+ SL+
Sbjct: 357 DHPHF-------------EGLDCEIFEAPE--PMTMALSVLVTIEMCNALNSLSENQSLM 401
Query: 974 TMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLVILVSAPVILIDEV 1033
MPPW N WLL ++ +S+ LH LILYV L +F + L+L +W +V+ +S PVI +DE+
Sbjct: 402 RMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEI 461
Query: 1034 LKFVGRN 1040
LKF+ RN
Sbjct: 462 LKFIARN 468
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 129 bits (324), Expect = 4e-32
Identities = 65/133 (48%), Positives = 91/133 (68%), Gaps = 3/133 (2%)
Query: 8 AWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVK 67
A S + E+CL + V GL+ +V++ E+YG NEL E+GK LW+LV+EQF+D LV+
Sbjct: 4 AHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVR 63
Query: 68 ILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALK 127
ILL+AA ISF+LA+F G+ +VEP VI+LIL+ NAIVGVWQE NAE A+EALK
Sbjct: 64 ILLLAACISFVLAWFE---EGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 128 KIQCESGKVLRDG 140
+ + + + +
Sbjct: 121 EYEPAATEQDKTP 133
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 98.2 bits (244), Expect = 5e-22
Identities = 73/171 (42%), Positives = 96/171 (56%), Gaps = 20/171 (11%)
Query: 226 VCIVINTGMNTEIGKIQKQIHDASLEESD-----------TPLRKKLDEFGNRLTTAIGL 274
I++ N +G Q++ + ++E TPL++KLDEFG +L+ I L
Sbjct: 92 FVILLILIANAIVGVWQERNAENAIEALKEYEPAATEQDKTPLQQKLDEFGEQLSKVISL 151
Query: 275 VCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCL 334
+C+ VW++N +F W YYFKIAVALAVAAIPEGLPAVITTCL
Sbjct: 152 ICVAVWLINIGHFNDPVHGGSW-------IRGAIYYFKIAVALAVAAIPEGLPAVITTCL 204
Query: 335 ALGTRKMAQKNAIVRKLPSVETLGCTTVICSDK--TGTLTTNQMSVTEFFT 383
ALGTR+MA+KNAIVR LPSVETLG + +++N V F
Sbjct: 205 ALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEVVCIFL 255
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 147 bits (371), Expect = 2e-41
Identities = 93/171 (54%), Positives = 114/171 (66%), Gaps = 3/171 (1%)
Query: 606 CYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665
C S I SD DPPR V +I CR AGI V++ITGDNK TA AICR+I +F
Sbjct: 1 CTSVICSDKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIF 60
Query: 666 SGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAM 725
NE++ R++TG+EF L +Q EA F+R EP HK +IV L+ E+ AM
Sbjct: 61 GENEEVADRAYTGREFDDLPLAEQREA--CRRACCFARVEPSHKSKIVEYLQSYDEITAM 118
Query: 726 TGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEG 776
TGDGVNDAPALK A+IG+AMG +GT VAK AS+MVLADDNF +IV+AV EG
Sbjct: 119 TGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 146 bits (370), Expect = 3e-40
Identities = 72/264 (27%), Positives = 112/264 (42%), Gaps = 42/264 (15%)
Query: 376 MSVTEFFTLGR---KTTISRIFHVEGTTYDPK-----DGGIVDWPCYNMDANLQAMAKIC 427
MSV + F + + F + G+TY P+ + + L +A IC
Sbjct: 1 MSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSG---QFDGLVELATIC 57
Query: 428 AVCNDAGVYC--DGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSS 485
A+CND+ + ++ G TE AL LVEKM + + RN +
Sbjct: 58 ALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERA--------- 108
Query: 486 TVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTG-----HNQLLVKGSVESLLERS 540
C + K+ TLEF R RKSMSV N++ VKG+ E +++R
Sbjct: 109 ---NACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRC 165
Query: 541 SHVQLADGSVVPLDEPCWQLMLS--RHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAH 598
++V++ + VP+ P + +LS + LRCL +A +D +
Sbjct: 166 NYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRD---------TPPKREE 215
Query: 599 KKLLDPSCYSTIESDLVFVGVVGL 622
L D S + E+DL FVGVVG+
Sbjct: 216 MVLDDSSRFMEYETDLTFVGVVGM 239
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 142 bits (359), Expect = 3e-37
Identities = 47/446 (10%), Positives = 104/446 (23%), Gaps = 104/446 (23%)
Query: 347 IVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDG 406
+ L LG + I + + F + K
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQK-------------DKILNKLKSL 72
Query: 407 GI-VDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDV 465
G+ +W M I + + A E +
Sbjct: 73 GLNSNW----------DMLFIVFSIHLIDILK------KLSHDEIEAFMYQDEPVE---- 112
Query: 466 KGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHN 525
+ ++ N L + + +
Sbjct: 113 -----LKLQNISTNLA-------------------DCFNLNEQLPLQFLDNVKVGKNNIY 148
Query: 526 QLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELG 585
L + + + + + + ++ + + + K
Sbjct: 149 AALEEFATT---------------ELHVSDATLFSLKGALWTLAQEVYQEWYLGSKL--- 190
Query: 586 EFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVM 645
Y + + + Y E L V ++D +GAG E+
Sbjct: 191 -----YEDVEKKIARTTFKTGYIYQEIILRP----------VDEVKVLLNDLKGAGFELG 235
Query: 646 VITGDNKSTAEAICRQ---IKLFSGNEDLTGRSFTGKEFMALSSTQQI--EALSKHGGKV 700
+ TG + + F + T E M + S
Sbjct: 236 IATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALY 295
Query: 701 FSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLAD---IGVAMGITGTEVAKEAS 757
+ + + + V + GD + D + + IG G+ G + A E
Sbjct: 296 GNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGE-- 353
Query: 758 DMVLADDNFGSIVSAVAEGRSIYNNM 783
L + +++ + E R + +N+
Sbjct: 354 ---LEAHHADYVINHLGELRGVLDNL 376
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 123 bits (309), Expect = 2e-32
Identities = 46/259 (17%), Positives = 78/259 (30%), Gaps = 56/259 (21%)
Query: 376 MSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGV 435
M+V + + E T + + G D A+++I +CN A
Sbjct: 2 MTVAHMWFDNQ--------IHEADTTEDQSGATFD----KRSPTWTALSRIAGLCNRAVF 49
Query: 436 YCDG-----PLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLG 490
G +E+AL +E G
Sbjct: 50 KAGQENISVSKRDTAGDASESALLKCIELSC----------------------------G 81
Query: 491 CCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQL--LVKGSVESLLERSSHVQLADG 548
R+ +VA + F+ K I ++KG+ E +L+R S + L G
Sbjct: 82 SVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSI-LVQG 140
Query: 549 SVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYS 608
+PLD+ + +LE+ G R LG + D +
Sbjct: 141 KEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLN--------LPSGKFPRGFKFDTDELN 192
Query: 609 TIESDLVFVGVVGLRDPPR 627
L FVG++ + D
Sbjct: 193 FPTEKLCFVGLMSMIDHHH 211
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 101 bits (252), Expect = 5e-26
Identities = 56/115 (48%), Positives = 80/115 (69%), Gaps = 1/115 (0%)
Query: 132 ESGKVLRDG-YLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEA 190
E GKV R V + A +VPGDIVE+ VGDKVPAD+R+ ++K+++LRV+QS LTGE+
Sbjct: 1 EMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGES 60
Query: 191 MPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQI 245
+ ++K T PV Q K+NM+F+GT + G + IV TG++TEIGKI+ Q+
Sbjct: 61 VSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 99.4 bits (247), Expect = 5e-25
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 35/166 (21%)
Query: 608 STIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSG 667
+ + D G D + A+ + + GI+V +ITGDN +AEAI R++
Sbjct: 4 TAVIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL----- 58
Query: 668 NEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTG 727
+ V + P K E V+ L+ EVVA G
Sbjct: 59 ----------------------------NLDLVIAEVLPHQKSEEVKKLQA-KEVVAFVG 89
Query: 728 DGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAV 773
DG+NDAPAL AD+G+A+G +G++VA E+ D+VL D+ +V+A+
Sbjct: 90 DGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 79.3 bits (194), Expect = 4e-17
Identities = 26/162 (16%), Positives = 46/162 (28%), Gaps = 10/162 (6%)
Query: 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFM 682
R G + + I VI+G + I
Sbjct: 73 DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKD---------RIYCNHA 123
Query: 683 ALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742
+ + S K ++ L E + + M GD V D A KL+D+
Sbjct: 124 SFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLC 183
Query: 743 VAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMK 784
A E +E + L +F I + + + ++
Sbjct: 184 FARDYLLNE-CREQNLNHLPYQDFYEIRKEIENVKEVQEWLQ 224
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 53.7 bits (128), Expect = 2e-08
Identities = 13/70 (18%), Positives = 21/70 (30%), Gaps = 2/70 (2%)
Query: 706 PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDN 765
K++ V K + V GD ND L A G+ V +E
Sbjct: 131 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HT 188
Query: 766 FGSIVSAVAE 775
+ + +
Sbjct: 189 YEDLKREFLK 198
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 50.0 bits (118), Expect = 4e-07
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Query: 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADD 764
+ ++ L + VA GDG ND A K+ VA+ ++ KE +D V +
Sbjct: 153 KGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKE 211
Query: 765 NFGSIVSAVAE 775
A+
Sbjct: 212 YGEGGAEAIYH 222
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 48.3 bits (113), Expect = 1e-06
Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 700 VFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDM 759
+ A+ ++I ++ E GDG ND K A + +A + KE +D+
Sbjct: 138 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADI 195
Query: 760 VLADDNFGSIVSAV 773
+ + I+ +
Sbjct: 196 CIEKRDLREILKYI 209
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.4 bits (114), Expect = 1e-06
Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 11/131 (8%)
Query: 634 IDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEAL 693
+ + ++V +I+G +S E + ++ T L E
Sbjct: 91 VSRLQERNVQVFLISGGFRSIVEHVASKL----------NIPATNVFANRLKFYFNGEYA 140
Query: 694 SKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG-ITGTEV 752
+ + + + K + K + + M GDG D A AD + G +
Sbjct: 141 GFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQ 200
Query: 753 AKEASDMVLAD 763
K+ + + D
Sbjct: 201 VKDNAKWYITD 211
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 46.5 bits (109), Expect = 9e-06
Identities = 13/72 (18%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 704 AEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLAD 763
+ +++ + V + GD ND L A+ T+ AK + VL
Sbjct: 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPV 265
Query: 764 DNFGSIVSAVAE 775
+ V+ + +
Sbjct: 266 SHREGAVAYLLK 277
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 45.7 bits (107), Expect = 1e-05
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 709 KQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGS 768
K+ ++ + E A+ GD +ND L+ A GVAMG E K +D V ++
Sbjct: 219 KRLAKQLNIPLEETAAV-GDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHG 276
Query: 769 IVSAV 773
+ +
Sbjct: 277 VAHMM 281
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 45.3 bits (106), Expect = 2e-05
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 709 KQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGS 768
+ + R VVA+ GD NDA LK+A AMG E K+ + D+N
Sbjct: 196 SRLLKRWDLSPQNVVAI-GDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEG 253
Query: 769 IVSAVAEGRSIYNNMKAF 786
++ + +++ +N F
Sbjct: 254 ALNVI---QAVLDNTYPF 268
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 45.3 bits (106), Expect = 2e-05
Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 719 MGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAE 775
E + GD ND ++ A +GVA+ KE ++ V + + A+ +
Sbjct: 212 KPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIEK 267
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 43.4 bits (101), Expect = 6e-05
Identities = 12/57 (21%), Positives = 17/57 (29%), Gaps = 1/57 (1%)
Query: 719 MGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAE 775
+ + + GD ND P +L T+ K SD V I
Sbjct: 166 EYDEILVIGDSNNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 43.4 bits (101), Expect = 7e-05
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Query: 708 HKQEIVRMLKEMGEV----VAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLAD 763
KQ+ + + + GDG ND L+ A IGVAMG E K A+D V A
Sbjct: 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAP 244
Query: 764 DNFGSIVSAVAE 775
+ I A+
Sbjct: 245 IDEDGISKAMKH 256
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 43.0 bits (100), Expect = 1e-04
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 709 KQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGS 768
+ RM + E+V GD ND + A + VAM E KEASD+V +N
Sbjct: 196 RFLRERMNWKKEEIVVF-GDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSG 253
Query: 769 IVSAV 773
+ +
Sbjct: 254 VSYVL 258
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 40.0 bits (93), Expect = 5e-04
Identities = 13/54 (24%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Query: 708 HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVL 761
++++ E A GD D PA A+ K A D VL
Sbjct: 84 ACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVL 136
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Score = 40.3 bits (94), Expect = 7e-04
Identities = 23/151 (15%), Positives = 48/151 (31%), Gaps = 19/151 (12%)
Query: 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRS--FTGKEFM 682
+ G + + GI V + + E + RQ ++ N + F +
Sbjct: 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVL 194
Query: 683 ALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKL---A 739
+ I +KH G + + LK+ ++ + GD D
Sbjct: 195 KGFKGELIHVFNKHDGAL-------KNTDYFSQLKDNSNIILL-GDSQGDLRMADGVANV 246
Query: 740 DIGVAMGITGTEVA------KEASDMVLADD 764
+ + +G V ++ D+VL +
Sbjct: 247 EHILKIGYLNDRVDELLEKYMDSYDIVLVKE 277
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 39.3 bits (90), Expect = 0.002
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMV 760
E A+ GD ND P ++ D +G + A+ S ++
Sbjct: 198 ESYAV-GDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSII 236
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1051 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.97 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.96 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.94 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.91 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.91 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.9 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.29 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.28 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.27 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.25 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.16 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.1 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.02 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.02 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.97 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.94 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.91 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.86 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.76 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.75 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.72 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.55 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.99 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.82 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.64 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.43 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.29 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.21 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.19 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.1 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.07 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.93 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 96.78 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 96.47 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.46 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 96.23 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.81 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 95.59 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.5 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 95.26 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.25 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 94.57 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 94.41 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 94.28 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 94.15 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 93.91 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 93.29 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 92.32 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 91.79 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 91.22 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 89.33 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 87.14 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 86.63 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 85.07 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=0 Score=406.13 Aligned_cols=470 Identities=53% Similarity=0.882 Sum_probs=360.3
Q ss_pred CCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 66545798889988199978999999999999613999778778988899999983457999999999999998861379
Q 001568 6 FPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSS 85 (1051)
Q Consensus 6 ~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~~ll~~a~~~~i~~~~~~~ 85 (1051)
.+||..++||+.+.|++|+++|||++|+++|+++||+|+++.++++++|+.++++|+++++++++++++++++.+.....
T Consensus 2 ~~~h~~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~ 81 (472)
T d1wpga4 2 EAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEG 81 (472)
T ss_dssp TTGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCT
T ss_pred CCHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 57344999999999696935596999999999804998799999999999999998389999999999999999987326
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECEEEECCCCCCCCEEEECCCCCC
Q ss_conf 99999965530135689989888888888886899999999842475249997894202750799667829994799702
Q 001568 86 DSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKV 165 (1051)
Q Consensus 86 ~~~~~~~~~~~~~~~ii~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~Vir~g~~~~~I~~~~Lv~GDII~i~~G~~i 165 (1051)
......|+++++++++++++..++++||+|+++++++++++.+.. ..||++
T Consensus 82 ---~~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~--------------------------~~~~~~ 132 (472)
T d1wpga4 82 ---EETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA--------------------------TEQDKT 132 (472)
T ss_dssp ---TSTTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC--------------------------CCCCCC
T ss_pred ---CCCCHHHHHHHHHHHEEEEEEEEEEEEECHHHHHHHHHHHHCCCC--------------------------CCCCCC
T ss_conf ---532023767666311244652577677501777888775212223--------------------------566586
Q ss_pred CCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECEEEEEEEEECCCHHHHHHHHHH
Q ss_conf 66389998228946996247878786413589878787323244454888402898243999999825521166799998
Q 001568 166 PADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQI 245 (1051)
Q Consensus 166 PaD~~il~~~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~i~aGt~v~~g~~~~iV~~tG~~T~~g~i~~~~ 245 (1051)
|+|.++
T Consensus 133 P~d~~l-------------------------------------------------------------------------- 138 (472)
T d1wpga4 133 PLQQKL-------------------------------------------------------------------------- 138 (472)
T ss_dssp HHHHHH--------------------------------------------------------------------------
T ss_pred HHHHHH--------------------------------------------------------------------------
T ss_conf 488899--------------------------------------------------------------------------
Q ss_pred HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 42035689992599999999999999999999999988640123444589896631102458899999999888765782
Q 001568 246 HDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEG 325 (1051)
Q Consensus 246 ~~~~~~~~~~~l~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~il~~~iP~~ 325 (1051)
++.+..+.......+.+.+...............| .+.....+..+++++++++|++
T Consensus 139 ----------------~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ai~l~V~~iPEg 195 (472)
T d1wpga4 139 ----------------DEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSW-------IRGAIYYFKIAVALAVAAIPEG 195 (472)
T ss_dssp ----------------HHHHHHHHHHHHHHHHHHHHHCCTTSSSCCSSSCS-------SSCGGGHHHHHHHHHHHHSCTT
T ss_pred ----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHCHHH
T ss_conf ----------------99999998999978799999999999999861046-------8999999999999999867516
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCC
Q ss_conf 38999999997649863127502247533235760688608986311287199999963875420146753075358999
Q 001568 326 LPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKD 405 (1051)
Q Consensus 326 L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~Lg~v~~i~~DKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~ 405 (1051)
||++++++++++++||+|+|++||+..++|++|+..+.|+|||-
T Consensus 196 Lp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i------------------------------------ 239 (472)
T d1wpga4 196 LPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFI------------------------------------ 239 (472)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHHH------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH------------------------------------
T ss_conf 89999999999999998636606658999999999888867764------------------------------------
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf 98547988887099999999985602684323799610047814999999999839998778765430233221103553
Q 001568 406 GGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSS 485 (1051)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 485 (1051)
T Consensus 240 -------------------------------------------------------------------------------- 239 (472)
T d1wpga4 240 -------------------------------------------------------------------------------- 239 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHH
Q ss_conf 21244300000235213865488999629999962898189999188158986111132479934118988899999999
Q 001568 486 TVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRH 565 (1051)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~F~s~~k~msviv~~~~~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~ 565 (1051)
T Consensus 240 -------------------------------------------------------------------------------- 239 (472)
T d1wpga4 240 -------------------------------------------------------------------------------- 239 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred HHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEE
Q ss_conf 99732136077899860465543434568411112479753124677809999821459999328999999973895799
Q 001568 566 LEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVM 645 (1051)
Q Consensus 566 ~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~gi~v~ 645 (1051)
T Consensus 240 -------------------------------------------------------------------------------- 239 (472)
T d1wpga4 240 -------------------------------------------------------------------------------- 239 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred EECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCEEEE
Q ss_conf 97479999999999983998899876566447068721999999999973699299982801099999999666999999
Q 001568 646 VITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAM 725 (1051)
Q Consensus 646 i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~ 725 (1051)
T Consensus 240 -------------------------------------------------------------------------------- 239 (472)
T d1wpga4 240 -------------------------------------------------------------------------------- 239 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred ECCCCCCHHHHHHCCEEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 95993599988859901883788528888503946137991389999999899889599999999887799999999999
Q 001568 726 TGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTA 805 (1051)
Q Consensus 726 iGDg~ND~~~l~~AdvgIa~g~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~n~~~~~~~~~~~ 805 (1051)
.|.++.|+..++..+++.
T Consensus 240 --------------------------------------------------------------~~~l~~n~~~v~~~~~~~ 257 (472)
T d1wpga4 240 --------------------------------------------------------------RYLISSNVGEVVCIFLTA 257 (472)
T ss_dssp --------------------------------------------------------------HHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------HHHHHHHHHHHHHHHHHH
T ss_conf --------------------------------------------------------------013343699999999999
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 93398743699999999987346664506899994443699999999876669999999999999999999999998404
Q 001568 806 ALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKG 885 (1051)
Q Consensus 806 ~~~~~~~~~~~~~l~~n~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 885 (1051)
+++.|.|++|+|++|+|+++|++|++++++||+|+++|++||+++++++++++.+.+++..|.+.+..+++.+++.+.+.
T Consensus 258 ~l~~p~pl~~~qILwinli~d~lpaiaL~~ep~d~~iM~~~Pr~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~ 337 (472)
T d1wpga4 258 ALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYA 337 (472)
T ss_dssp HSCCCCSCCHHHHHHHHHTTTHHHHHHHTTCCCCSGGGGSCCCCTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred HCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 73998642379999999875888999996388854430499999975664999999999999999999999999999972
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 55553334799753233232346755777876556644579743235899753334421025788999999999986321
Q 001568 886 SFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMFNSLNA 965 (1051)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~t~~f~~lv~~q~~~~~~~ 965 (1051)
.. .....+.....+..|.... ..+. ...+.. ....+++|++|++++++|+++.+++
T Consensus 338 ~~---------~~~~~~~~~~~~~~~~~~~------------~~~~-~~~~~~--~~~~~a~T~~F~~lv~~q~~~~~~~ 393 (472)
T d1wpga4 338 ED---------GPGVTYHQLTHFMQCTEDH------------PHFE-GLDCEI--FEAPEPMTMALSVLVTIEMCNALNS 393 (472)
T ss_dssp SS---------SCCCTTSGGGGTTTTSSST------------TTTC-CSCGGG--GGCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CC---------CCCCCHHHHHHHHHCCCCC------------CCCC-CCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 37---------9987678776776406776------------5446-520345--5676789999999999999999998
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 446787532599887578999999999999997500000240112579246899999998999999999998411322
Q 001568 966 LSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLVILVSAPVILIDEVLKFVGRNRRL 1043 (1051)
Q Consensus 966 ~~~~~s~~~~~~~~N~~~~~~~~~~~~l~~~~~~vp~~~~~f~~~~l~~~~w~~~~~~~~~~l~~~e~~K~~~r~~~~ 1043 (1051)
|+++.+.|+.++|+|++++++++++++++++++|+|+++.+|++.|+++.+|+++++++++.++++|++|++.|++.+
T Consensus 394 rs~~~s~~~~~~~~N~~l~~av~i~~~l~~~i~yiP~l~~vf~~~pL~~~~w~i~l~~~~~~~~~~El~K~~~R~~~~ 471 (472)
T d1wpga4 394 LSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNYLE 471 (472)
T ss_dssp SCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTTTHHHHTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC
T ss_pred HCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 257754222576316999999999999999999866778888065889999999999999999999999998310889
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.97 E-value=3.3e-30 Score=227.65 Aligned_cols=150 Identities=59% Similarity=0.897 Sum_probs=145.2
Q ss_pred CCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEE
Q ss_conf 99993289999999738957999747999999999998399889987656644706872199999999997369929998
Q 001568 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (1051)
Q Consensus 624 d~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~ 703 (1051)
||+|++++++|+.|+++||++||+|||+..||.++|+++||......+....+++.+++.++..+..+... +..+|+|
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~v~ar 96 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACR--RACCFAR 96 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHH--HCCEEES
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH--HHHHHHC
T ss_conf 88965399999999988498999899997999999998499887641110003463000012788766553--2230000
Q ss_pred ECCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHHHH
Q ss_conf 2801099999999666999999959935999888599018837885288885039461379913899999998
Q 001568 704 AEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEG 776 (1051)
Q Consensus 704 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~AdvgIa~g~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 776 (1051)
++|++|..+|+.+|++|++|+|+|||.||++||++|||||||+ ++++.++++||+++.+++|..+..+|++|
T Consensus 97 ~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 97 VEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCEEEEEC-CCCHHHHHHCCEEECCCCHHHHHHHHHCC
T ss_conf 0114788899998740454047706778889998598888865-51199998489999159989999999749
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.96 E-value=2e-27 Score=207.84 Aligned_cols=206 Identities=20% Similarity=0.233 Sum_probs=156.9
Q ss_pred CEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC-----CCCCCCCCH
Q ss_conf 719999996387542014675307535899998547988887099999999985602684323799-----610047814
Q 001568 375 QMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGP-----LFRATGLPT 449 (1051)
Q Consensus 375 ~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~-----~~~~~~~p~ 449 (1051)
.|+|+++|..++.+ ...+....+.. .....++.++.++.++++||++.+..+.. .+...|+|+
T Consensus 1 ~MTV~~~w~~~~~~------~~~~~~~~~~~------~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~Gdpt 68 (214)
T d1q3ia_ 1 MMTVAHMWFDNQIH------EADTTEDQSGA------TFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDAS 68 (214)
T ss_dssp CCEEEEEEETTEEE------ECCCC------------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHH
T ss_pred CEEEEEEEECCEEE------ECCCCCCCCCC------CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 95999999999999------76777767776------4445898999999999970877444677777655664166859
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECC--CCCEEE
Q ss_conf 999999999839998778765430233221103553212443000002352138654889996299999628--981899
Q 001568 450 EAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREP--TGHNQL 527 (1051)
Q Consensus 450 e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~msviv~~~--~~~~~~ 527 (1051)
|.||+.++.+.|... ...+..+.++.++||+|.||+|+++++.+ ++.+.+
T Consensus 69 E~ALl~~a~~~~~~~----------------------------~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~ 120 (214)
T d1q3ia_ 69 ESALLKCIELSCGSV----------------------------RKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVL 120 (214)
T ss_dssp HHHHHHHHHHHHSCH----------------------------HHHHHTSCEEEEEC------CEEEEEECSSCTTSEEE
T ss_pred HHHHHHHHHHHCCCH----------------------------HHHHHHCCEEEEEEECCCCCEEEEEEECCCCCCCEEE
T ss_conf 999999999959899----------------------------9998638286468557888778999972678874347
Q ss_pred EECCCHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99188158986111132479934118988899999999997321360778998604655434345684111124797531
Q 001568 528 LVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCY 607 (1051)
Q Consensus 528 ~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~ 607 (1051)
|+|||||.|+++|+++.. +|...|++++.++.+.+.+++|+.+|+||||+|||+++.+...... ..+....
T Consensus 121 ~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~--------~~~~~~~ 191 (214)
T d1q3ia_ 121 VMKGAPERILDRCSSILV-QGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGF--------KFDTDEL 191 (214)
T ss_dssp EEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTC--------CCCTTTT
T ss_pred EECCCHHHHHHHHHHEEE-CCCEEECHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCC--------CCCHHHH
T ss_conf 852788999986343534-8953002388999999999997408768999999865832255545--------4570145
Q ss_pred CCCCCCEEEEEEECCCCCCCHH
Q ss_conf 2467780999982145999932
Q 001568 608 STIESDLVFVGVVGLRDPPRGG 629 (1051)
Q Consensus 608 ~~~e~~l~~lG~i~~~d~~r~~ 629 (1051)
+..|+||+|+|++|+.||||++
T Consensus 192 ~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 192 NFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp SSCCSSEEEEEEEEEESCCSCC
T ss_pred HHHCCCCEEEEEEEEEECCCCC
T ss_conf 4221798998999988089899
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.94 E-value=1.8e-25 Score=193.95 Aligned_cols=225 Identities=32% Similarity=0.453 Sum_probs=163.5
Q ss_pred EEEEEEEECCCC---CCCEEEEEECCCCCCCCCCCCCCCCC--CCCHHHHHHHHHHHHHHCCCCCCC--CCCCCCCCCCC
Q ss_conf 199999963875---42014675307535899998547988--887099999999985602684323--79961004781
Q 001568 376 MSVTEFFTLGRK---TTISRIFHVEGTTYDPKDGGIVDWPC--YNMDANLQAMAKICAVCNDAGVYC--DGPLFRATGLP 448 (1051)
Q Consensus 376 m~v~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~lc~~~~~~~--~~~~~~~~~~p 448 (1051)
|+|.+++..+.. ......+.++|..|.|.+........ ....+.++.++.++++||++.+.. .++.+...|+|
T Consensus 1 MtV~~m~v~~~~~~~~~~~~~~~VtG~~y~p~G~i~~~~~~v~~~~~~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~p 80 (239)
T d1wpga3 1 MSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEA 80 (239)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCSCEEEEETTTTEEEEESCH
T ss_pred CEEEEEEEEEEECCCCCCCEEEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCC
T ss_conf 94699999953047765631899996766783579889858676566999999999884278870530789759986899
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCC-----
Q ss_conf 499999999983999877876543023322110355321244300000235213865488999629999962898-----
Q 001568 449 TEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTG----- 523 (1051)
Q Consensus 449 ~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~msviv~~~~~----- 523 (1051)
+|.||+.++.+.|+.....+..... ..........+..|.++.++||+|.||||+++++.+++
T Consensus 81 TE~ALl~~a~k~g~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~ 148 (239)
T d1wpga3 81 TETALTTLVEKMNVFNTEVRNLSKV------------ERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAV 148 (239)
T ss_dssp HHHHHHHHHHHHCTTCCCCSSSCHH------------HHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGGG
T ss_pred CCHHHHHHHHHHCCCHHHHHCCCHH------------HHHCCCHHHHHHHCEEEEEEEECCCCCEEEEEEECCCCCCCCC
T ss_conf 8079999999939975786324303------------3320111455653707888600656627899987489986663
Q ss_pred CEEEEECCCHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHH--HHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 189999188158986111132479934118988899999999997--321360778998604655434345684111124
Q 001568 524 HNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEM--SSKGLRCLGMAYKDELGEFSDYYSESHPAHKKL 601 (1051)
Q Consensus 524 ~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~ 601 (1051)
.+.+|+|||||.|+++|+.+.. ++...|+++..++.+.+.++++ +++|+|||++|||+++.+.... ..
T Consensus 149 ~~~l~vKGApe~iL~~C~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k~~~~~~~~~---------~~ 218 (239)
T d1wpga3 149 GNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEM---------VL 218 (239)
T ss_dssp CSEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEESSCCCGGGC---------CT
T ss_pred EEEEEEECCHHHHHHHCCCEEC-CCCEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCC---------CC
T ss_conf 1599984874999973623443-9926309999999999999998675378889999999878440113---------32
Q ss_pred CCCCCCCCCCCCEEEEEEECC
Q ss_conf 797531246778099998214
Q 001568 602 LDPSCYSTIESDLVFVGVVGL 622 (1051)
Q Consensus 602 ~~~~~~~~~e~~l~~lG~i~~ 622 (1051)
.+......+|+||+|+|++|+
T Consensus 219 ~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 219 DDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp TCGGGHHHHTCSEEEEEEEEE
T ss_pred CCHHHHHHHCCCCEEEEEECC
T ss_conf 341668876179999999879
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.91 E-value=2.6e-31 Score=235.48 Aligned_cols=322 Identities=13% Similarity=0.039 Sum_probs=213.1
Q ss_pred CCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 75332357606886089863112871999999638754201467530753589999854798888709999999998560
Q 001568 351 LPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVC 430 (1051)
Q Consensus 351 ~~~~e~Lg~v~~i~~DKTGTLT~~~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc 430 (1051)
..+.|.||...++|+|||||+|+|.|.+..+...... .......+ +.+ ..+....++|
T Consensus 30 l~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il------~~~k~~g~-------------n~~---~dl~~~~~~~ 87 (380)
T d1qyia_ 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKIL------NKLKSLGL-------------NSN---WDMLFIVFSI 87 (380)
T ss_dssp HHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHH------HHHHHTTC-------------CCH---HHHHHHHHHH
T ss_pred HHCHHHCCCCEEEECCCCCCHHHHHHEEEEECCHHHH------HHHHHCCC-------------CHH---HHHHHHHHHH
T ss_conf 6120112564045337655100433111330532466------76662688-------------806---9999999999
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 26843237996100478149999999998399987787654302332211035532124430000023521386548899
Q 001568 431 NDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRI 510 (1051)
Q Consensus 431 ~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~ 510 (1051)
+.+.. .+..++|.+.+++...+..+.. .....+.+.....+||++.
T Consensus 88 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~i~f~~~ 133 (380)
T d1qyia_ 88 HLIDI------LKKLSHDEIEAFMYQDEPVELK----------------------------LQNISTNLADCFNLNEQLP 133 (380)
T ss_dssp HHHHH------HTTSCHHHHHHHHHCSSCHHHH----------------------------HTTSGGGCSSCCCCCTTTT
T ss_pred HHHHH------HHHCCCCCHHHHHHHHHHCCCH----------------------------HHHHHHHCCCCCCCCCCHH
T ss_conf 99987------7434898577898777543640----------------------------8999875365556775148
Q ss_pred CCEEEEEEECCCCCEEEEECCCHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCC
Q ss_conf 96299999628981899991881589861111324799341189888999999999973213607789986046554343
Q 001568 511 RKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDY 590 (1051)
Q Consensus 511 ~k~msviv~~~~~~~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~ 590 (1051)
+++|++........+..+.+|+++.+. +++..++.+......++.+|+|++++|++..++...
T Consensus 134 ~k~~~~~~~~~~~~~~~~~~~a~~~~~---------------~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~-- 196 (380)
T d1qyia_ 134 LQFLDNVKVGKNNIYAALEEFATTELH---------------VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEK-- 196 (380)
T ss_dssp HHHHTTCCSSHHHHHHHHHHHHHHHTT---------------CSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHCCCCCCHHHHHHHCCHHHCC---------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--
T ss_conf 888765324553144755521376528---------------758889999868999999999998772202233455--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC--CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCC
Q ss_conf 456841111247975312467780999982145999--932899999997389579997479999999999983998899
Q 001568 591 YSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPP--RGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGN 668 (1051)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~--r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~ 668 (1051)
....+....|+++.++++ +++++++++.|+++|++++|+|||+..++..+++++||....
T Consensus 197 ------------------~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F 258 (380)
T d1qyia_ 197 ------------------KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYF 258 (380)
T ss_dssp ------------------SCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGS
T ss_pred ------------------CCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCC
T ss_conf ------------------33156675423013565334363999999999879959998899799999999981995347
Q ss_pred CCCCCCCCCCHHHHCC-------------CHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCHHH
Q ss_conf 8765664470687219-------------999999999736992999828010999999996669999999599359998
Q 001568 669 EDLTGRSFTGKEFMAL-------------SSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPA 735 (1051)
Q Consensus 669 ~~~~~~~~~~~~~~~l-------------~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~ 735 (1051)
.. ..++++++.... .++.+. ....+++.+|.+|..+++.++..++.|+|+|||.||++|
T Consensus 259 ~~--~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~------~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~a 330 (380)
T d1qyia_ 259 EA--DFIATASDVLEAENMYPQARPLGKPNPFSYI------AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLS 330 (380)
T ss_dssp CG--GGEECHHHHHHHHHHSTTSCCCCTTSTHHHH------HHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHH
T ss_pred CC--CEEEECCHHHHHHHHCCCCCCCCCCCHHHHH------HHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHH
T ss_conf 85--0587441333112203311023699869999------999980887788999999738998869998899899999
Q ss_pred HHHCC---EEEEECCCCCHHHHH----CCCEEECCCCCHHHHHHH
Q ss_conf 88599---018837885288885----039461379913899999
Q 001568 736 LKLAD---IGVAMGITGTEVAKE----ASDMVLADDNFGSIVSAV 773 (1051)
Q Consensus 736 l~~Ad---vgIa~g~~~~~~a~~----~ad~vl~~~~~~~i~~~i 773 (1051)
.++|| |||+||..|++..++ .||+++.+ +..+..++
T Consensus 331 ak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~--~~el~~il 373 (380)
T d1qyia_ 331 AQKIGATFIGTLTGLKGKDAAGELEAHHADYVINH--LGELRGVL 373 (380)
T ss_dssp HHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESS--GGGHHHHH
T ss_pred HHHCCCCEEEEECCCCCCCCHHHHHHCCCCEEECC--HHHHHHHH
T ss_conf 99879988999458888643778976799999889--99999999
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.91 E-value=2.8e-24 Score=185.50 Aligned_cols=125 Identities=41% Similarity=0.611 Sum_probs=116.8
Q ss_pred EEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHH
Q ss_conf 99998214599993289999999738957999747999999999998399889987656644706872199999999997
Q 001568 615 VFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALS 694 (1051)
Q Consensus 615 ~~lG~i~~~d~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 694 (1051)
+..+.++++|++|++++++|+.|+++|++++|+|||+..++.++|+++||.
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~----------------------------- 61 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------- 61 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------
T ss_pred CEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHH-----------------------------
T ss_conf 147997368899811999999999859979997586335556777654222-----------------------------
Q ss_pred HCCCEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHH
Q ss_conf 36992999828010999999996669999999599359998885990188378852888850394613799138999999
Q 001568 695 KHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVA 774 (1051)
Q Consensus 695 ~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~AdvgIa~g~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 774 (1051)
.++++++|++|..+++.+|.. +.|+|+|||.||+|||++|||||||+ ++++.++++||+++.++++.+++.+|+
T Consensus 62 ----~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 62 ----LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp ----EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred ----HHCCCCCHHHHHHHHHHHHCC-CEEEEEECCCCCHHHHHHCCEEEECC-CCCHHHHHHCCEEEECCCHHHHHHHHC
T ss_conf ----101211026799999999859-97899967877578897478624537-658789984999997899889999859
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.90 E-value=1.6e-23 Score=180.26 Aligned_cols=114 Identities=48% Similarity=0.737 Sum_probs=103.6
Q ss_pred CEEEEEECCEEC-EEEECCCCCCCCEEEECCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 524999789420-2750799667829994799702663899982289469962478787864135898787873232444
Q 001568 132 ESGKVLRDGYLV-PDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAK 210 (1051)
Q Consensus 132 ~~~~Vir~g~~~-~~I~~~~Lv~GDII~i~~G~~iPaD~~il~~~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~ 210 (1051)
+.++|+|+|++. ++|++++|+|||||.|++|++||||++|+.++++++.||||+|||||.|+.|.+.+.........++
T Consensus 1 e~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~ 80 (115)
T d1wpga1 1 EMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDK 80 (115)
T ss_dssp SEEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGC
T ss_pred CCEEEEECCCCEEEEEEHHHCCCCCEEEECCCCEEEECEEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCC
T ss_conf 92699999984599986999889989999999999515699996126268987200034689874136622654344333
Q ss_pred CCEEEECCEEEECEEEEEEEEECCCHHHHHHHHHH
Q ss_conf 54888402898243999999825521166799998
Q 001568 211 ENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQI 245 (1051)
Q Consensus 211 ~n~i~aGt~v~~g~~~~iV~~tG~~T~~g~i~~~~ 245 (1051)
.|++|+||.|.+|+++++|++||.+|.+|+|++++
T Consensus 81 ~n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 81 KNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred CCEEEECCEEEEEEEEEEEEEECCCCHHHHHHHHC
T ss_conf 34477416898456999999996003889999759
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.29 E-value=4e-11 Score=92.17 Aligned_cols=74 Identities=24% Similarity=0.201 Sum_probs=62.2
Q ss_pred ECCHHHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHH
Q ss_conf 2801099999999666----99999995993599988859901883788528888503946137991389999999899
Q 001568 704 AEPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRS 778 (1051)
Q Consensus 704 ~~p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~AdvgIa~g~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~ 778 (1051)
.....|...++.+.+. .+.++++|||.||.+|++.|++||||+ ++.+.+++.||+++..++..++..++.+...
T Consensus 148 ~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~l~ 225 (230)
T d1wr8a_ 148 KPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHILE 225 (230)
T ss_dssp CTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHCCCCCCCCCCHHHEEEEECCCCHHHHHHHCCEEEEEC-CCCHHHHHHCCEEECCCCCCHHHHHHHHHHH
T ss_conf 07767613320112110013324256626730799999789079988-9879999857999899984789999999999
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.28 E-value=3.1e-11 Score=92.91 Aligned_cols=72 Identities=28% Similarity=0.347 Sum_probs=61.8
Q ss_pred EECCH--HHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHHH
Q ss_conf 82801--099999999666----99999995993599988859901883788528888503946137991389999999
Q 001568 703 RAEPR--HKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAE 775 (1051)
Q Consensus 703 ~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~AdvgIa~g~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 775 (1051)
..+|. +|...++.+.+. .+.|+++|||.||.+||+.|+.||||+ ++.+.++..|++++..++-.++.+++++
T Consensus 206 di~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 206 ELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCEEEEEC-CCCHHHHHHCCEECCCCCCCHHHHHHHH
T ss_conf 99555402366898877650557204999929788899998489189968-9989999858988278875589999998
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.27 E-value=7.5e-11 Score=90.20 Aligned_cols=69 Identities=26% Similarity=0.222 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHHH
Q ss_conf 01099999999666----99999995993599988859901883788528888503946137991389999999
Q 001568 706 PRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAE 775 (1051)
Q Consensus 706 p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~AdvgIa~g~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 775 (1051)
..+|...++.+.+. ...|+++|||.||.+|++.|++||||+ ++.+.+++.||+++..++..++..++++
T Consensus 149 ~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 149 GEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCHHHEEEECCCCCHHHHHHHCCEEEEEC-CCCHHHHHHCCEEECCCCCCHHHHHHHH
T ss_conf 652278999876651002302256448843599999779089988-9759999849999898984889999998
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.25 E-value=5.9e-11 Score=90.94 Aligned_cols=71 Identities=23% Similarity=0.309 Sum_probs=61.3
Q ss_pred EECCH--HHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHH
Q ss_conf 82801--099999999666----9999999599359998885990188378852888850394613799138999999
Q 001568 703 RAEPR--HKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVA 774 (1051)
Q Consensus 703 ~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~AdvgIa~g~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 774 (1051)
..+|. +|...++.+.+. ...++++|||.||.+||+.|+.|+||+ ++.+.++..|++++..++-.++.++++
T Consensus 190 ~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 190 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EECCCCCCCCCCCCEEHHHCCCCHHCEEEEECCHHHHHHHHHCCCEEEEC-CCCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 85278887654200001100114201799918676799998589189967-987999985898838898583999999
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.16 E-value=6.5e-11 Score=90.64 Aligned_cols=71 Identities=27% Similarity=0.303 Sum_probs=61.8
Q ss_pred EECCH--HHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHH
Q ss_conf 82801--099999999666----9999999599359998885990188378852888850394613799138999999
Q 001568 703 RAEPR--HKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVA 774 (1051)
Q Consensus 703 ~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~AdvgIa~g~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 774 (1051)
..+|. +|...++.+.+. .+.|+++|||.||.+||+.|+.|+||+ ++.+.+++.|++++.+++-.++...|+
T Consensus 183 di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 183 DLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEECCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCEEEEEC-CCCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 88458657778888776650214241899908844199998589189958-998999984788818898459999999
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.10 E-value=2.6e-10 Score=86.35 Aligned_cols=72 Identities=33% Similarity=0.327 Sum_probs=62.1
Q ss_pred EECC--HHHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHHH
Q ss_conf 8280--1099999999666----99999995993599988859901883788528888503946137991389999999
Q 001568 703 RAEP--RHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAE 775 (1051)
Q Consensus 703 ~~~p--~~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~AdvgIa~g~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 775 (1051)
...| ..|...++.+.++ ...++++|||.||.+||+.|+.|+||+ ++.+.+++.||++..+++-.++..+|++
T Consensus 179 ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 179 DVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp EEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHCCEEEEEC-CCCHHHHHHCCEEECCCCCCHHHHHHHH
T ss_conf 99748899999999998732235755167658855599998489089958-9989999847978088875689999998
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.02 E-value=1.4e-09 Score=81.19 Aligned_cols=71 Identities=31% Similarity=0.395 Sum_probs=61.4
Q ss_pred EECCH--HHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHH
Q ss_conf 82801--099999999666----9999999599359998885990188378852888850394613799138999999
Q 001568 703 RAEPR--HKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVA 774 (1051)
Q Consensus 703 ~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~AdvgIa~g~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 774 (1051)
..+|. +|...++.+.+. ...|+++|||.||.+||+.|++||||+ ++.+.+++.||+++.+++..++..+++
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCEEEEC-CCCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 65587775167899998860368220899808844099998689089948-998999985898858887538999999
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.02 E-value=2.7e-09 Score=79.19 Aligned_cols=67 Identities=22% Similarity=0.255 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHCCCEEECCC-CCHHHHHHHH
Q ss_conf 1099999999666----999999959935999888599018837885288885039461379-9138999999
Q 001568 707 RHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADD-NFGSIVSAVA 774 (1051)
Q Consensus 707 ~~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~AdvgIa~g~~~~~~a~~~ad~vl~~~-~~~~i~~~i~ 774 (1051)
..|...++.+.+. ...|+++|||.||.+||+.|++|+||+ ++.+.++..||+++..+ +-.++..+++
T Consensus 206 ~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 206 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCEEEEC-CCCHHHHHHCCEEECCCCCCCHHHHHHH
T ss_conf 50577888776641002020799648763699998589189968-9989999848999998488869999999
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.97 E-value=3.8e-09 Score=78.14 Aligned_cols=102 Identities=22% Similarity=0.204 Sum_probs=83.5
Q ss_pred HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEECCHHHH
Q ss_conf 99999997389579997479999999999983998899876566447068721999999999973699299982801099
Q 001568 631 DKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQ 710 (1051)
Q Consensus 631 ~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~~~p~~K~ 710 (1051)
..+|+.++..|+.+.++||+....+...++++++.. ++. ...+|.
T Consensus 38 g~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~---------------------------------~~~--~~~~K~ 82 (177)
T d1k1ea_ 38 GLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL---------------------------------FFL--GKLEKE 82 (177)
T ss_dssp HHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------EEE--SCSCHH
T ss_pred HHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHCCCC---------------------------------CCC--CCCCHH
T ss_conf 488878765217899966984467899876321220---------------------------------110--136388
Q ss_pred HHHHHHHH----CCCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHCCCEEECCCCCHH
Q ss_conf 99999966----69999999599359998885990188378852888850394613799138
Q 001568 711 EIVRMLKE----MGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGS 768 (1051)
Q Consensus 711 ~iv~~l~~----~~~~v~~iGDg~ND~~~l~~AdvgIa~g~~~~~~a~~~ad~vl~~~~~~~ 768 (1051)
..++.+.+ ....|+++||+.||.+||+.|++|+||+ ++.+.+++.||+++..+.-.+
T Consensus 83 ~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~G 143 (177)
T d1k1ea_ 83 TACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKG 143 (177)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTT
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCEEEECC-CCCHHHHHHCCEEECCCCCCC
T ss_conf 8999999986677522577058840789996689289848-864999985899917889976
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.94 E-value=2.5e-09 Score=79.44 Aligned_cols=129 Identities=21% Similarity=0.273 Sum_probs=91.2
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC--CCCCCHHHHCCCHHHHHHHHHHCCCEEEE
Q ss_conf 9993289999999738957999747999999999998399889987656--64470687219999999999736992999
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTG--RSFTGKEFMALSSTQQIEALSKHGGKVFS 702 (1051)
Q Consensus 625 ~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~v~~ 702 (1051)
+++|++.++++.|++.|++++++||.....+..+++.+|+......-+. ...+|...... ....
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~--------------~~~p 147 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFD--------------ETQP 147 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEEC--------------TTSG
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEHHCCCCCE--------------EEEE
T ss_conf 04777999999997379979998999358888889870996100366553222000003642--------------2246
Q ss_pred EECCHHHHHHHHHHHHC--CCEEEEECCCCCCHHHHHHCCEEEEECCC-CCHHHHHCCCEEECCCCCHHH
Q ss_conf 82801099999999666--99999995993599988859901883788-528888503946137991389
Q 001568 703 RAEPRHKQEIVRMLKEM--GEVVAMTGDGVNDAPALKLADIGVAMGIT-GTEVAKEASDMVLADDNFGSI 769 (1051)
Q Consensus 703 ~~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~~l~~AdvgIa~g~~-~~~~a~~~ad~vl~~~~~~~i 769 (1051)
...+..|..+++.++++ ...+.++|||.||++|++.|+++||++.+ ..+..++.+|.++.+ |..+
T Consensus 148 ~~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~--f~el 215 (217)
T d1nnla_ 148 TAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD--FVEL 215 (217)
T ss_dssp GGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC--GGGG
T ss_pred EECCCHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCEECC--HHHH
T ss_conf 5242208999999986348666389971786599898689219979877789999868998689--8884
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.91 E-value=2.6e-09 Score=79.31 Aligned_cols=148 Identities=18% Similarity=0.106 Sum_probs=103.2
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 99932899999997389579997479999999999983998899876566447068721999999999973699299982
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 704 (1051)
++++++.+.++.|++.|+++.++|+.....+..+.+++|+....... .....+....... .......++..
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an-~~~~~~~~~~~~~--------~~~~~~~~~~~ 145 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCN-HASFDNDYIHIDW--------PHSCKGTCSNQ 145 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEE-EEECSSSBCEEEC--------TTCCCTTCCSC
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEE-EEEEECCCCEECC--------CCCCCCCCCCC
T ss_conf 42499999999998542531157753066699999980995014543-4798288102201--------01354325567
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHC-CCEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 8010999999996669999999599359998885990188378852888850-394613799138999999989988959
Q 001568 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEA-SDMVLADDNFGSIVSAVAEGRSIYNNM 783 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~AdvgIa~g~~~~~~a~~~-ad~vl~~~~~~~i~~~i~~gR~~~~~i 783 (1051)
.|..|..+++.++...+.|+++||+.||.+|+++||+++|++ ...+.+.+. .++.. -++|..+...+.+-....+.+
T Consensus 146 k~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~-~~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~~~~~~~ 223 (226)
T d2feaa1 146 CGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLP-YQDFYEIRKEIENVKEVQEWL 223 (226)
T ss_dssp CSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEEC-CSSHHHHHHHHHTSHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCEEEEEC-CHHHHHHHCCCCEEE-CCCHHHHHHHHHHHHHHHHHH
T ss_conf 899999999984678863899807631399999889978706-467999982998362-499999999999987899985
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.86 E-value=2.5e-08 Score=72.25 Aligned_cols=131 Identities=15% Similarity=0.154 Sum_probs=93.3
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 99932899999997389579997479999999999983998899876566447068721999999999973699299982
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 704 (1051)
+..+.....++.+ +.+.+..+.++.............++....... ..... ..........
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--l~~~~----------------~~~~~~~~~~ 129 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHK--LEIDD----------------SDRVVGYQLR 129 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEE--EEECT----------------TSCEEEEECC
T ss_pred CCCCHHHHHHHHH-HCCCEEEEECCCCHHHHHHHHHHHCCCHHHCCE--EEEEC----------------CCCCCCCCCC
T ss_conf 5562488999886-047468885167138888999984783333110--25621----------------4445432112
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHHHH
Q ss_conf 801099999999666999999959935999888599018837885288885039461379913899999998
Q 001568 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEG 776 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~AdvgIa~g~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 776 (1051)
.+..+...++.++...+.|+|+|||.||++|++.|++||||+ ++.++.++++|+++. .+...+...|...
T Consensus 130 ~~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~-~~~~d~~~~~~~~ 199 (206)
T d1rkua_ 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFLKA 199 (206)
T ss_dssp SSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEE-CSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHCCCCEEEC-CCHHHHHHCCCCEEE-CCHHHHHHHHHHH
T ss_conf 014578899986425652188438732799998589409978-977999867895562-6889999999997
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.76 E-value=1.9e-08 Score=73.19 Aligned_cols=53 Identities=17% Similarity=0.249 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHH----C-CCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHCCCEE
Q ss_conf 109999999966----6-99999995993599988859901883788528888503946
Q 001568 707 RHKQEIVRMLKE----M-GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMV 760 (1051)
Q Consensus 707 ~~K~~iv~~l~~----~-~~~v~~iGDg~ND~~~l~~AdvgIa~g~~~~~~a~~~ad~v 760 (1051)
..|...++.+.+ . ...++++|||.||.+||+.|+.||||+ |+.+..++.++.+
T Consensus 178 ~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~-Na~~~~~~~~~~i 235 (243)
T d1wzca1 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSI 235 (243)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTCEEESCH
T ss_pred HCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCEEEEC-CCCHHHHHHHHHH
T ss_conf 100779999999835999141999849885899998499389927-9986887023188
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.75 E-value=7.4e-08 Score=68.96 Aligned_cols=71 Identities=18% Similarity=0.214 Sum_probs=58.0
Q ss_pred ECCHHHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHCCC-------EEECCCCCHHHHHH
Q ss_conf 2801099999999666----999999959935999888599018837885288885039-------46137991389999
Q 001568 704 AEPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASD-------MVLADDNFGSIVSA 772 (1051)
Q Consensus 704 ~~p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~AdvgIa~g~~~~~~a~~~ad-------~vl~~~~~~~i~~~ 772 (1051)
....+|...++.+.+. ...|.++|||.||.+||+.|+.|++|+ ++.+.+++.|| ++...+...++.++
T Consensus 158 ~~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~ 236 (244)
T d1s2oa1 158 PQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEA 236 (244)
T ss_dssp ETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHCCCEEEEC-CCCHHHHHHHHCCCCCCEEECCCCCCCHHHHH
T ss_conf 67641557788887741577303799758887799996189189967-99999999863236665377189971489999
Q ss_pred HHH
Q ss_conf 999
Q 001568 773 VAE 775 (1051)
Q Consensus 773 i~~ 775 (1051)
+++
T Consensus 237 l~~ 239 (244)
T d1s2oa1 237 IAH 239 (244)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 998
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.72 E-value=3.7e-08 Score=71.06 Aligned_cols=130 Identities=20% Similarity=0.262 Sum_probs=91.2
Q ss_pred CCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEE
Q ss_conf 99993289999999738957999747999999999998399889987656644706872199999999997369929998
Q 001568 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (1051)
Q Consensus 624 d~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~ 703 (1051)
.++.+++.+.++.++..|..+.+.|+.....+....++.++...... ........ .......
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--------------~~~~~~~ 135 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN----RLIVKDGK--------------LTGDVEG 135 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE----EEEEETTE--------------EEEEEEC
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHCCCHHHHHHH----HHCCCCCC--------------CCCCCCC
T ss_conf 00135599999999974987876326542222302220320466654----42110122--------------2123332
Q ss_pred --ECCHHHHHHH----HHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHCCCEEECCCCCHHHHHHH
Q ss_conf --2801099999----999666999999959935999888599018837885288885039461379913899999
Q 001568 704 --AEPRHKQEIV----RMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAV 773 (1051)
Q Consensus 704 --~~p~~K~~iv----~~l~~~~~~v~~iGDg~ND~~~l~~AdvgIa~g~~~~~~a~~~ad~vl~~~~~~~i~~~i 773 (1051)
..+..|...+ ..++...+.++++|||.||++|++.|++|||| ++.+..+..||+++..+++.+|...|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 136 EVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp SSCSTTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred CCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCCEEE--CCCHHHHHHCCEEECCCCHHHHHHHH
T ss_conf 111123454103357888466655417863784749999988987899--98999997499999179999999986
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.55 E-value=4.6e-07 Score=63.35 Aligned_cols=41 Identities=27% Similarity=0.299 Sum_probs=31.9
Q ss_pred HHHHHHHHHHH-------CCCEEEEECCCCCCHHHHHHCCEEEEECCCC
Q ss_conf 09999999966-------6999999959935999888599018837885
Q 001568 708 HKQEIVRMLKE-------MGEVVAMTGDGVNDAPALKLADIGVAMGITG 749 (1051)
Q Consensus 708 ~K~~iv~~l~~-------~~~~v~~iGDg~ND~~~l~~AdvgIa~g~~~ 749 (1051)
.|..-++.+.+ ....++++|||.||.+||+.|++||+|. ++
T Consensus 184 ~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~vaV~-n~ 231 (232)
T d1xvia_ 184 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK-GL 231 (232)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC-CC
T ss_pred HHHHHHHHHHHHHHHCCCCHHCEEEECCCHHHHHHHHHCCEEEEEE-CC
T ss_conf 1789999999999975989521999849786899998199089971-89
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.99 E-value=4.2e-06 Score=56.52 Aligned_cols=55 Identities=13% Similarity=0.222 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHC-CCEEEEECC----CCCCHHHHHHCC-EEEEECCCCCHHHHHCCCEEEC
Q ss_conf 1099999999666-999999959----935999888599-0188378852888850394613
Q 001568 707 RHKQEIVRMLKEM-GEVVAMTGD----GVNDAPALKLAD-IGVAMGITGTEVAKEASDMVLA 762 (1051)
Q Consensus 707 ~~K~~iv~~l~~~-~~~v~~iGD----g~ND~~~l~~Ad-vgIa~g~~~~~~a~~~ad~vl~ 762 (1051)
..|...++.+.+. .+.|+++|| |.||.+||++|+ .|+||+ ++.|.++..+|+++.
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~~ 244 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFP 244 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHHCCCCCEEECC-CHHHHHHHHHHHCCC
T ss_conf 0278999999669844599986889999972999971798589918-989999999986199
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.82 E-value=2.7e-05 Score=50.79 Aligned_cols=61 Identities=16% Similarity=0.308 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHCCCEEECCCCCHHHHHHH
Q ss_conf 1099999999666999999959935999888599018837885288885039461379913899999
Q 001568 707 RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAV 773 (1051)
Q Consensus 707 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~AdvgIa~g~~~~~~a~~~ad~vl~~~~~~~i~~~i 773 (1051)
.+|...++.+.+. ..++++||+.||.+||+.|+.|+||+ +|. .+.+|++.+.+ ...+..++
T Consensus 158 ~~Kg~al~~l~~~-~~~i~~GDs~ND~~Mf~~~~~~~av~-~g~--~~~~A~~~~~~--~~ev~~~l 218 (229)
T d1u02a_ 158 VNKGSAIRSVRGE-RPAIIAGDDATDEAAFEANDDALTIK-VGE--GETHAKFHVAD--YIEMRKIL 218 (229)
T ss_dssp CCHHHHHHHHHTT-SCEEEEESSHHHHHHHHTTTTSEEEE-ESS--SCCCCSEEESS--HHHHHHHH
T ss_pred CCHHHHHHHHHCC-CCCEEECCCCCHHHHHHCCCCEEEEE-ECC--CCCCCEEECCC--HHHHHHHH
T ss_conf 9889999997440-44566438887099996028828999-689--87667287599--99999999
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.64 E-value=0.00016 Score=45.32 Aligned_cols=134 Identities=15% Similarity=0.214 Sum_probs=82.5
Q ss_pred CCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC--CCCCCHHHHCCCHHHHHHHHHHCCCEEE
Q ss_conf 99993289999999738957999747999999999998399889987656--6447068721999999999973699299
Q 001568 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTG--RSFTGKEFMALSSTQQIEALSKHGGKVF 701 (1051)
Q Consensus 624 d~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~v~ 701 (1051)
-++|+++++.++.|++.|+.+.++||--......+++++|+..++..+.+ ...++..+. .-+
T Consensus 134 i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~----------------~~~ 197 (291)
T d2bdua1 134 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVL----------------KGF 197 (291)
T ss_dssp CCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBE----------------EEE
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCEEE----------------EEC
T ss_conf 8766389999999997497089985873999999999829986574699657997088268----------------603
Q ss_pred E--EECCHHHHHHH----HHHH--HCCCEEEEECCCCCCHHHHHH---CCEEEEECC-CCCH-----HHHHCCCEEECCC
Q ss_conf 9--82801099999----9996--669999999599359998885---990188378-8528-----8885039461379
Q 001568 702 S--RAEPRHKQEIV----RMLK--EMGEVVAMTGDGVNDAPALKL---ADIGVAMGI-TGTE-----VAKEASDMVLADD 764 (1051)
Q Consensus 702 ~--~~~p~~K~~iv----~~l~--~~~~~v~~iGDg~ND~~~l~~---AdvgIa~g~-~~~~-----~a~~~ad~vl~~~ 764 (1051)
- -.+...|...+ ...+ .....|.++|||.||..|.+. ++..++.|. +... .-.++-|+++.+|
T Consensus 198 ~~~~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d 277 (291)
T d2bdua1 198 KGELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKE 277 (291)
T ss_dssp CSSCCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEECC
T ss_conf 47864345686315445998853278676899967776899983885446324543137669987999876079788568
Q ss_pred CCHHHHHHH
Q ss_conf 913899999
Q 001568 765 NFGSIVSAV 773 (1051)
Q Consensus 765 ~~~~i~~~i 773 (1051)
.-..++..|
T Consensus 278 ~~~~v~~~i 286 (291)
T d2bdua1 278 ESLEVVNSI 286 (291)
T ss_dssp CBCHHHHHH
T ss_pred CCHHHHHHH
T ss_conf 784689999
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.43 E-value=0.00033 Score=43.10 Aligned_cols=121 Identities=16% Similarity=0.150 Sum_probs=80.1
Q ss_pred CCHHHHHHHHHHHHCC-CEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 9932899999997389-579997479999999999983998899876566447068721999999999973699299982
Q 001568 626 PRGGVDKAIDDCRGAG-IEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 626 ~r~~~~~~I~~l~~~g-i~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 704 (1051)
+-+++.++++.|++.| +++.++|+.....+....+..|+....+. +..+++. .
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~----i~~~~~~----------------------~ 145 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPF----GAFADDA----------------------L 145 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSC----EECTTTC----------------------S
T ss_pred ECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC----CCCCCCC----------------------C
T ss_conf 0685288876541123112235578850000012332012222222----2222334----------------------4
Q ss_pred CCHHH----HHHHHHHHH---CCCEEEEECCCCCCHHHHHHCCE---EEEECCCCCH-HHHHCCCEEECCCCCHHHHHHH
Q ss_conf 80109----999999966---69999999599359998885990---1883788528-8885039461379913899999
Q 001568 705 EPRHK----QEIVRMLKE---MGEVVAMTGDGVNDAPALKLADI---GVAMGITGTE-VAKEASDMVLADDNFGSIVSAV 773 (1051)
Q Consensus 705 ~p~~K----~~iv~~l~~---~~~~v~~iGDg~ND~~~l~~Adv---gIa~g~~~~~-~a~~~ad~vl~~~~~~~i~~~i 773 (1051)
.+..+ ...++.+.. ..+.++||||+.+|+.|-+.|++ +|+.|....+ ..+..+|+++. ++..+..++
T Consensus 146 ~~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~--~~~el~~~l 223 (228)
T d2hcfa1 146 DRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVL 223 (228)
T ss_dssp SGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHCCCCCCHHHHEEECCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEEC--CHHHHHHHH
T ss_conf 345415778887653002487766802324872789999984997999807999988996589999989--999999999
Q ss_pred H
Q ss_conf 9
Q 001568 774 A 774 (1051)
Q Consensus 774 ~ 774 (1051)
.
T Consensus 224 ~ 224 (228)
T d2hcfa1 224 A 224 (228)
T ss_dssp H
T ss_pred H
T ss_conf 9
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.29 E-value=0.0016 Score=38.22 Aligned_cols=126 Identities=19% Similarity=0.204 Sum_probs=85.8
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 99932899999997389579997479999999999983998899876566447068721999999999973699299982
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 704 (1051)
++.+++.++++.|++.|+++.++|+.+......+.+..|+..... ..++.+++...- .-
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~---d~~~~~d~~~~~------------------KP 157 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP---DFLVTPDDVPAG------------------RP 157 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC---SCCBCGGGSSCC------------------TT
T ss_pred CCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCC------------------CC
T ss_conf 317757999999885024411017983566888899876401223---344555432223------------------45
Q ss_pred CCHHHHHHHHHHHHC-CCEEEEECCCCCCHHHHHHCCEE-EEECCCCC------H---------------------HHHH
Q ss_conf 801099999999666-99999995993599988859901-88378852------8---------------------8885
Q 001568 705 EPRHKQEIVRMLKEM-GEVVAMTGDGVNDAPALKLADIG-VAMGITGT------E---------------------VAKE 755 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~~l~~Advg-Ia~g~~~~------~---------------------~a~~ 755 (1051)
.|+.=...++.+.-. .+.++|+||+.+|+.+=+.|++- |++. .|. + ..+.
T Consensus 158 ~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (257)
T d1swva_ 158 YPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVI-LGSSELGLTEEEVENMDSVELREKIEVVRNRFVEN 236 (257)
T ss_dssp SSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEEC-TTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCEEEEEC-CCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHC
T ss_conf 81778999999589876518999687340899998799899981-37777898989986279999999999999999747
Q ss_pred CCCEEECCCCCHHHHHHHH
Q ss_conf 0394613799138999999
Q 001568 756 ASDMVLADDNFGSIVSAVA 774 (1051)
Q Consensus 756 ~ad~vl~~~~~~~i~~~i~ 774 (1051)
.||+++.+ +..+..+|.
T Consensus 237 gad~vi~~--l~eL~~ii~ 253 (257)
T d1swva_ 237 GAHFTIET--MQELESVME 253 (257)
T ss_dssp TCSEEESS--GGGHHHHHH
T ss_pred CCCEEECC--HHHHHHHHH
T ss_conf 99899879--999999999
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.21 E-value=0.00053 Score=41.60 Aligned_cols=120 Identities=16% Similarity=0.168 Sum_probs=79.9
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 99932899999997389579997479999999999983998899876566447068721999999999973699299982
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 704 (1051)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+..... .++.+++... +.-
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~----~i~~~~~~~~------------------~Kp 145 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD----ALASAEKLPY------------------SKP 145 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS----EEEECTTSSC------------------CTT
T ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCC------------------CHH
T ss_conf 456327999887540345522133210001112222223332222----2223232221------------------014
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCC----HHHHHCCCEEECCCCCHHH
Q ss_conf 8010999999996669999999599359998885990188378852----8888503946137991389
Q 001568 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGT----EVAKEASDMVLADDNFGSI 769 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~AdvgIa~g~~~~----~~a~~~ad~vl~~~~~~~i 769 (1051)
.|+-=...++.+.-..+.++++||+.+|+.|-+.|++.... .+.. +.....+|+++.+ +..+
T Consensus 146 ~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~-v~~~~~~~~~~~~~a~~~i~~--l~el 211 (218)
T d1te2a_ 146 HPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIV-VPAPEAQNDPRFVLANVKLSS--LTEL 211 (218)
T ss_dssp STHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEE-CCCTTTTTCGGGGGSSEECSC--GGGC
T ss_pred HHHHHHHHHHHCCCCCHHCEEEEECHHHHHHHHHCCCEEEE-ECCCCCCCCHHHCCCCEEECC--HHHC
T ss_conf 57899999997299951308996098999999983997999-899877666223589999899--2669
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.19 E-value=0.00049 Score=41.83 Aligned_cols=125 Identities=15% Similarity=0.200 Sum_probs=84.4
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 99932899999997389579997479999999999983998899876566447068721999999999973699299982
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 704 (1051)
.+.+++.+.++.|++.|+++.++|+.....+..+.+++||...... ++...+... ...
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~----~~~~~~~~~------------------~kp 152 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSE----MLGGQSLPE------------------IKP 152 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE----EECTTTSSS------------------CTT
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCC----CCCCCCCCC------------------CCC
T ss_conf 1688999999998506874202134528899999986496342143----112333454------------------432
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCE-EEEEC--CC-CCHHHHHCCCEEECCCCCHHHHHHH
Q ss_conf 8010999999996669999999599359998885990-18837--88-5288885039461379913899999
Q 001568 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI-GVAMG--IT-GTEVAKEASDMVLADDNFGSIVSAV 773 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~Adv-gIa~g--~~-~~~~a~~~ad~vl~~~~~~~i~~~i 773 (1051)
.|+--..+.+.++-....++++||+.+|+.+-+.|++ .|.+. .. ..+.....+|+++.+ +..+..++
T Consensus 153 ~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~--l~dL~~ii 223 (224)
T d2hsza1 153 HPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDD--FADILKIT 223 (224)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESS--GGGGGGGT
T ss_pred CCHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCEEECC--HHHHHHHH
T ss_conf 101357899886431100202117698999999909959999179998340666699999899--99998863
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.10 E-value=0.00083 Score=40.22 Aligned_cols=118 Identities=14% Similarity=0.158 Sum_probs=79.8
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 99932899999997389579997479999999999983998899876566447068721999999999973699299982
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 704 (1051)
++.+++.+.++.++..+ ++.++|+.....+..+.+.+|+..... ..+.+.-
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd----------------------------~v~~~~~ 134 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFD----------------------------GIYGSSP 134 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------EEEEECS
T ss_pred CCHHHHHHHHHHHHCCC-CHHHCCCCCCHHHHHHHHHHCCCCCCC----------------------------CCCCCCC
T ss_conf 21068999875420134-100002332101157787501233200----------------------------0022232
Q ss_pred CCHHHHHHHHH----HHHCCCEEEEECCCCCCHHHHHHCCE-EEEE--CCCCCHH-HHHCCCEEECCCCCHHHHHHH
Q ss_conf 80109999999----96669999999599359998885990-1883--7885288-885039461379913899999
Q 001568 705 EPRHKQEIVRM----LKEMGEVVAMTGDGVNDAPALKLADI-GVAM--GITGTEV-AKEASDMVLADDNFGSIVSAV 773 (1051)
Q Consensus 705 ~p~~K~~iv~~----l~~~~~~v~~iGDg~ND~~~l~~Adv-gIa~--g~~~~~~-a~~~ad~vl~~~~~~~i~~~i 773 (1051)
.+..|..+... ++-..+.+++|||+.+|+.|-+.|++ .|.+ |....+. ....+|+++.+ +..+...+
T Consensus 135 ~~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~--l~el~~~l 209 (210)
T d2ah5a1 135 EAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLAYF 209 (210)
T ss_dssp SCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHHHT
T ss_pred CCCCCCCCCCHHHHHHHCCCCCCEEECCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEECC--HHHHHHHH
T ss_conf 2222333211012332012001646547778999999859939998579899778976899999899--99999985
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.07 E-value=0.0057 Score=34.29 Aligned_cols=117 Identities=21% Similarity=0.209 Sum_probs=74.9
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCHHHH---------------HHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHH
Q ss_conf 993289999999738957999747999999---------------99999839988998765664470687219999999
Q 001568 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTA---------------EAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQI 690 (1051)
Q Consensus 626 ~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta---------------~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~ 690 (1051)
+-+++.++++.|+++|+++.++|....... .......|+..
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 83 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDL------------------------ 83 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCC------------------------
T ss_pred ECCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC------------------------
T ss_conf 88789999999866184166664220235566678765401012445555401344------------------------
Q ss_pred HHHHHCCCEEEEEE------------------CCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEE--EEEC--CC
Q ss_conf 99973699299982------------------80109999999966699999995993599988859901--8837--88
Q 001568 691 EALSKHGGKVFSRA------------------EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG--VAMG--IT 748 (1051)
Q Consensus 691 ~~~~~~~~~v~~~~------------------~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~Advg--Ia~g--~~ 748 (1051)
....+|.. .|.--..+++.+.-..+.+.||||..+|+.|=+.|+++ +.+. ..
T Consensus 84 ------~~~~~cp~~p~~~~~~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~ 157 (182)
T d2gmwa1 84 ------DGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKP 157 (182)
T ss_dssp ------SEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSC
T ss_pred ------CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCC
T ss_conf ------54056553334665533345555687432231012211655344512279899999999828884799899977
Q ss_pred CCHHHHHCCCEEECCCCCHHHHHHHH
Q ss_conf 52888850394613799138999999
Q 001568 749 GTEVAKEASDMVLADDNFGSIVSAVA 774 (1051)
Q Consensus 749 ~~~~a~~~ad~vl~~~~~~~i~~~i~ 774 (1051)
..+.....||+++.+ +..+.++|+
T Consensus 158 ~~~~~~~~ad~v~~~--l~dl~~~ik 181 (182)
T d2gmwa1 158 ITPEAENAADWVLNS--LADLPQAIK 181 (182)
T ss_dssp CCHHHHHHCSEEESC--GGGHHHHHH
T ss_pred CCCCCCCCCCEEECC--HHHHHHHHC
T ss_conf 772102479889899--999999963
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.93 E-value=0.0038 Score=35.56 Aligned_cols=126 Identities=16% Similarity=0.140 Sum_probs=81.9
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 99932899999997389579997479999999999983998899876566447068721999999999973699299982
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 704 (1051)
++.|++.++++.|+ +|+++.++|+..........+.+|+....+ .++...+...- .-
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd----~i~~s~~~~~~------------------KP 156 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFD----SITTSEEAGFF------------------KP 156 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCS----EEEEHHHHTBC------------------TT
T ss_pred CCCCCHHHHHHHHH-CCCCEEEEECCCCCCCHHHHCCCCCCCCCC----CCCCCCCCCCC------------------CH
T ss_conf 51006999998764-037603662132211011101233221002----23333222232------------------21
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCC-CCCHHHHHHCCEEEEE-CC-CCCHHHHHCCCEEECCCCCHHHHHHHHH
Q ss_conf 8010999999996669999999599-3599988859901883-78-8528888503946137991389999999
Q 001568 705 EPRHKQEIVRMLKEMGEVVAMTGDG-VNDAPALKLADIGVAM-GI-TGTEVAKEASDMVLADDNFGSIVSAVAE 775 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~~~~v~~iGDg-~ND~~~l~~AdvgIa~-g~-~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 775 (1051)
.|+-=..+++.+.-....++++||. .+|+.+=+.|++.... .. .........+|+++.+ +..+..++++
T Consensus 157 ~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~~ 228 (230)
T d1x42a1 157 HPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSD--LREVIKIVDE 228 (230)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESS--TTHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEECC--HHHHHHHHHH
T ss_conf 35778877764066431264562174867999998599899988999870104589999889--9999999997
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.78 E-value=0.00039 Score=42.53 Aligned_cols=50 Identities=16% Similarity=0.260 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHH-CCCEEEEECC----CCCCHHHHHHCC-EEEEECCCCCHHHHHCCC
Q ss_conf 109999999966-6999999959----935999888599-018837885288885039
Q 001568 707 RHKQEIVRMLKE-MGEVVAMTGD----GVNDAPALKLAD-IGVAMGITGTEVAKEASD 758 (1051)
Q Consensus 707 ~~K~~iv~~l~~-~~~~v~~iGD----g~ND~~~l~~Ad-vgIa~g~~~~~~a~~~ad 758 (1051)
.+|...++.+.+ ..+.|+++|| |.||.+||+.|+ .|++++ +..| ++..++
T Consensus 184 vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~~~~-~~~~~~ 239 (243)
T d2amya1 184 WDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APED-TRRICE 239 (243)
T ss_dssp CSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHH-HHHHHH
T ss_pred CCHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCCCCCEEEEC-CHHH-HHHHHH
T ss_conf 6789999998489936299986899999976999971597299907-9999-999999
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=96.47 E-value=0.02 Score=30.35 Aligned_cols=107 Identities=15% Similarity=0.192 Sum_probs=69.1
Q ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCC
Q ss_conf 47814999999999839998778765430233221103553212443000002352138654889996299999628981
Q 001568 445 TGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGH 524 (1051)
Q Consensus 445 ~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~msviv~~~~~~ 524 (1051)
+.||...|++++++..+..... ...+......+|....+...+.+.
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~g~~~~----- 74 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRER-----------------------------DVQSLHATFVPFTAQSRMSGINID----- 74 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCC-----------------------------CTTTTTCEEEEEETTTTEEEEEET-----
T ss_pred CCCHHHHHHHHHHHHHCCCCCC-----------------------------CCCCCCCCCCCCCCCCCEEEEEEC-----
T ss_conf 7866899999999985587755-----------------------------311012444454323425889878-----
Q ss_pred EEEEECCCHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89999188158986111132479934118988899999999997321360778998604655434345684111124797
Q 001568 525 NQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDP 604 (1051)
Q Consensus 525 ~~~~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~ 604 (1051)
...+..|++..+...+... + ..++ ..+.+..++++.+|.+++.+|.
T Consensus 75 g~~v~~G~~~~~~~~~~~~----g--~~~~----~~~~~~~~~~~~~G~Tvv~Va~------------------------ 120 (136)
T d2a29a1 75 NRMIRKGSVDAIRRHVEAN----G--GHFP----TDVDQKVDQVARQGATPLVVVE------------------------ 120 (136)
T ss_dssp TEEEEEECHHHHHHHHHHH----T--CCCC----HHHHHHHHHHHHTTSEEEEEEE------------------------
T ss_pred CEEEEECHHHHHHHHHHHC----C--CCCC----HHHHHHHHHHHHCCCEEEEEEE------------------------
T ss_conf 9799966789999999971----8--9880----9999999999977985999999------------------------
Q ss_pred CCCCCCCCCEEEEEEECCCCCCC
Q ss_conf 53124677809999821459999
Q 001568 605 SCYSTIESDLVFVGVVGLRDPPR 627 (1051)
Q Consensus 605 ~~~~~~e~~l~~lG~i~~~d~~r 627 (1051)
|..++|++++.|++|
T Consensus 121 --------d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 121 --------GSRVLGVIALKDIVK 135 (136)
T ss_dssp --------TTEEEEEEEEEESSC
T ss_pred --------CCEEEEEEEEEEECC
T ss_conf --------999999999983058
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.46 E-value=0.0045 Score=35.02 Aligned_cols=120 Identities=15% Similarity=0.096 Sum_probs=78.0
Q ss_pred CCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEE
Q ss_conf 59999328999999973895799974799999999999839988998765664470687219999999999736992999
Q 001568 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS 702 (1051)
Q Consensus 623 ~d~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~ 702 (1051)
.-.+.|++.+.++.|++.|+++.++|+............+|+..-.... +...+.. ...
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~---~~~~d~~------------------~~~ 183 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELV---DGHFDTK------------------IGH 183 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGC---SEEECGG------------------GCC
T ss_pred CCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHC---CEEECCC------------------CCC
T ss_conf 3666887899999986424754445898488999999972840433202---3330245------------------335
Q ss_pred EECCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEE----CCCCCHHHHHCCCEEECC
Q ss_conf 8280109999999966699999995993599988859901883----788528888503946137
Q 001568 703 RAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAM----GITGTEVAKEASDMVLAD 763 (1051)
Q Consensus 703 ~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~AdvgIa~----g~~~~~~a~~~ad~vl~~ 763 (1051)
+-.|+-=....+.+.-..+.++||||..+|+.+=++|++.... |..........++.++.+
T Consensus 184 KP~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~s 248 (253)
T d1zs9a1 184 KVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITS 248 (253)
T ss_dssp TTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESS
T ss_pred CCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCEECC
T ss_conf 77808889999994899674899947999999999859979999689989986344578817998
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.23 E-value=0.0097 Score=32.63 Aligned_cols=126 Identities=11% Similarity=0.068 Sum_probs=79.4
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 99932899999997389579997479999999999983998899876566447068721999999999973699299982
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 704 (1051)
++.+++.++++.|++ |+++.++|+.+........+..|+....+. ++.+.+...- .-
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~----i~~s~~~~~~------------------KP 165 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDA----IVIGGEQKEE------------------KP 165 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSE----EEEGGGSSSC------------------TT
T ss_pred CCCCCHHHHHHHHHC-CCCEEEEECCCCHHHHHHHHHCCCCCCCCC----CCCCCCCCCC------------------HH
T ss_conf 658348999998411-460688622320012333320222222222----2322222210------------------03
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCC-CCHHHHHHCCEE-EEECCCCC---HHHHHCCCEEECCCCCHHHHHHHHH
Q ss_conf 80109999999966699999995993-599988859901-88378852---8888503946137991389999999
Q 001568 705 EPRHKQEIVRMLKEMGEVVAMTGDGV-NDAPALKLADIG-VAMGITGT---EVAKEASDMVLADDNFGSIVSAVAE 775 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~~l~~Advg-Ia~g~~~~---~~a~~~ad~vl~~~~~~~i~~~i~~ 775 (1051)
+|+-=..+.+.+.-..+.++++||.. +|+.+=+.|++. +..-.... ......+|+++.+ +..+..+++.
T Consensus 166 ~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~--l~eL~~ll~~ 239 (247)
T d2gfha1 166 APSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSS--VLELPALLQS 239 (247)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESS--GGGHHHHHHH
T ss_pred HHHHHHHHHHHHHCCHHHCCEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEECC--HHHHHHHHHH
T ss_conf 3324788999960287752420357186799999839949999779988764335799989899--9999999999
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.81 E-value=0.02 Score=30.36 Aligned_cols=92 Identities=8% Similarity=-0.056 Sum_probs=64.6
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCC-HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEE
Q ss_conf 999328999999973895799974799-9999999998399889987656644706872199999999997369929998
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDN-KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (1051)
Q Consensus 625 ~~r~~~~~~I~~l~~~gi~v~i~TGd~-~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~ 703 (1051)
++.|++.++++.|++.|+++.++|+-+ ...+...-+..++... ...+...
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~-----------------------------~~~~~~~ 96 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKY-----------------------------FIQREIY 96 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGG-----------------------------CSEEEES
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHCCCCCCC-----------------------------CEEEECC
T ss_conf 60557999999999789948997356621010000000233332-----------------------------1023226
Q ss_pred ECCH--HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEE
Q ss_conf 2801--09999999966699999995993599988859901883
Q 001568 704 AEPR--HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAM 745 (1051)
Q Consensus 704 ~~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~AdvgIa~ 745 (1051)
..|. .-..+.+.+.-..+.++++||...|+.+-+.|++-...
T Consensus 97 ~kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~ 140 (164)
T d1u7pa_ 97 PGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIH 140 (164)
T ss_dssp SSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEE
T ss_pred CCCCHHHHHHHHHHHCCCHHHEEEECCCHHHHHHHHHCCCEEEE
T ss_conf 68976999999999688869979874878789999986997999
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.59 E-value=0.006 Score=34.12 Aligned_cols=119 Identities=13% Similarity=0.102 Sum_probs=75.2
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 99932899999997389579997479999999999983998899876566447068721999999999973699299982
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 704 (1051)
++.|++.++++.|++.|+++.++|+... .+..+.++.|+...-+ .++..++.. ...-
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~----~i~~s~~~~------------------~~Kp 138 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFT----EILTSQSGF------------------VRKP 138 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEE----EEECGGGCC------------------CCTT
T ss_pred CCCCHHHHHHHCCCCCCCCHHHHCCCCH-HHHHHHHHCCCCCCCC----CCCCCCCCC------------------CCCH
T ss_conf 4563477654211022220022113510-3344333101221222----222222344------------------3202
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEE-EECCCCCHHHHHCCCEEECCCCCHHHHHHH
Q ss_conf 801099999999666999999959935999888599018-837885288885039461379913899999
Q 001568 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV-AMGITGTEVAKEASDMVLADDNFGSIVSAV 773 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~AdvgI-a~g~~~~~~a~~~ad~vl~~~~~~~i~~~i 773 (1051)
.|+--..+++.+.-....++||||+.+|+.+-+.|++.. .+. .+.. .++..+. ++..+..++
T Consensus 139 ~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~-~~~~----~~~~~~~--~~~dl~~l~ 201 (204)
T d2go7a1 139 SPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-ESTY----EGNHRIQ--ALADISRIF 201 (204)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCSC----TTEEECS--STTHHHHHT
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCEEEEEC-CCCC----CCCEECC--CHHHHHHHH
T ss_conf 5788899999829997518999479899999998699699984-7999----9580048--998999986
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.50 E-value=0.022 Score=30.18 Aligned_cols=109 Identities=14% Similarity=0.090 Sum_probs=69.4
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 99932899999997389579997479999999999983998899876566447068721999999999973699299982
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 704 (1051)
++.+++.+.++.|++.|+++.++|+.+.... ...+..|+.... ..++.+++...- .-
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~f----d~i~~~~~~~~~------------------KP 135 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYF----TEVVTSSSGFKR------------------KP 135 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGE----EEEECGGGCCCC------------------TT
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH-HHHHHHCCCCCC----CCCCCCCCCCCC------------------CC
T ss_conf 0244268888877764212233455762101-345542022122----221222223456------------------88
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCCHHHHHCCCE
Q ss_conf 8010999999996669999999599359998885990188378852888850394
Q 001568 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDM 759 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~AdvgIa~g~~~~~~a~~~ad~ 759 (1051)
.|+--....+.+. .+.++++||..+|+.+=+.|++-...- ++.+..++..|+
T Consensus 136 ~p~~~~~~~~~~~--~~~~l~vgDs~~Di~aA~~aG~~~i~v-~~~~~~~~~~d~ 187 (187)
T d2fi1a1 136 NPESMLYLREKYQ--ISSGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLDI 187 (187)
T ss_dssp SCHHHHHHHHHTT--CSSEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHTC
T ss_pred CHHHHHHHHHHCC--CCCEEEEECCHHHHHHHHHCCCEEEEE-CCCCCHHHHCCC
T ss_conf 8999999999849--997699907999999999859979999-998874753579
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=95.26 E-value=0.0041 Score=35.31 Aligned_cols=59 Identities=17% Similarity=0.142 Sum_probs=36.7
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCC-CHHHHHHCCE-EEEEC--CCCCHH---HHHCCCEEECC
Q ss_conf 801099999999666999999959935-9998885990-18837--885288---88503946137
Q 001568 705 EPRHKQEIVRMLKEMGEVVAMTGDGVN-DAPALKLADI-GVAMG--ITGTEV---AKEASDMVLAD 763 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~~~~v~~iGDg~N-D~~~l~~Adv-gIa~g--~~~~~~---a~~~ad~vl~~ 763 (1051)
.|+--..+.+.+.-..+.++||||+.+ |+.|-+.|++ +|.+. ....+. +...+|+++.+
T Consensus 182 ~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~s 247 (253)
T d1yv9a1 182 KAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDS 247 (253)
T ss_dssp SHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESS
T ss_pred CHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEECC
T ss_conf 126787899984888442378437827799999987998999898999978897368999789799
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.25 E-value=0.0014 Score=38.50 Aligned_cols=122 Identities=9% Similarity=0.162 Sum_probs=78.1
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 99932899999997389579997479999999999983998899876566447068721999999999973699299982
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 704 (1051)
++.+++.++++.|++ ++++.++|+.....+..+.+..|+.... ..+..+++... ..-
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f----~~i~~~~~~~~------------------~KP 138 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRM----AVTISADDTPK------------------RKP 138 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGE----EEEECGGGSSC------------------CTT
T ss_pred CCCCCHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCC------------------CHH
T ss_conf 346403444332014-5542000232111111111222222222----22222222222------------------103
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECC--CCCHHHHHCCCEEECCCCCHHHHH
Q ss_conf 8010999999996669999999599359998885990188378--852888850394613799138999
Q 001568 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGI--TGTEVAKEASDMVLADDNFGSIVS 771 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~AdvgIa~g~--~~~~~a~~~ad~vl~~~~~~~i~~ 771 (1051)
.|+--..+++.++-..+.+++|||+.+|+.+-+.|++....-. .......+.+|+++.+ +..+..
T Consensus 139 ~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~--l~dll~ 205 (207)
T d2hdoa1 139 DPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQK--PLDILE 205 (207)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESS--GGGGGG
T ss_pred HHHHHCCCCCCEEEECCCEEEECCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCEECC--HHHHHH
T ss_conf 4443002342104511340685477878999998499299993588975676532927489--999985
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=94.57 E-value=0.096 Score=25.57 Aligned_cols=66 Identities=29% Similarity=0.344 Sum_probs=43.7
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCC-CCHHHHHHCCE-EEEECCCC---CHHHHH---CCCEEECCCCCHHHHHHH
Q ss_conf 80109999999966699999995993-59998885990-18837885---288885---039461379913899999
Q 001568 705 EPRHKQEIVRMLKEMGEVVAMTGDGV-NDAPALKLADI-GVAMGITG---TEVAKE---ASDMVLADDNFGSIVSAV 773 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~~l~~Adv-gIa~g~~~---~~~a~~---~ad~vl~~~~~~~i~~~i 773 (1051)
.|.--....+.+.-..+.++||||.. +|+.+-+.|++ +|.+. +| .+.... ..|+++.+ +..+.++|
T Consensus 187 ~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~-~G~~~~~~~~~~~~~PD~ii~~--l~eL~~~l 260 (261)
T d1vjra_ 187 NPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVL-TGETTPEDLERAETKPDFVFKN--LGELAKAV 260 (261)
T ss_dssp STHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEES-SSSCCHHHHHHCSSCCSEEESS--HHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCHHCCEECCCHHHHHHHHHHCCCCEEEEC-CCCCCHHHHHHCCCCCCEEECC--HHHHHHHH
T ss_conf 57888888766404722110316871678999998799699989-8999877886368999899889--99999976
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=94.41 E-value=0.019 Score=30.61 Aligned_cols=89 Identities=17% Similarity=0.309 Sum_probs=63.3
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCH----HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEE
Q ss_conf 993289999999738957999747999----9999999983998899876566447068721999999999973699299
Q 001568 626 PRGGVDKAIDDCRGAGIEVMVITGDNK----STAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (1051)
Q Consensus 626 ~r~~~~~~I~~l~~~gi~v~i~TGd~~----~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~ 701 (1051)
+.+++.+.++.+++.|++++.+||+.. .|+..+.+.+|+..... ...++
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~---------------------------~~vll 139 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNM---------------------------NPVIF 139 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTB---------------------------CCCEE
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCC---------------------------CCEEE
T ss_conf 662499999999975974999938845657999999998719874566---------------------------63476
Q ss_pred EEEC--CHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCE-EEEE
Q ss_conf 9828--010999999996669999999599359998885990-1883
Q 001568 702 SRAE--PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI-GVAM 745 (1051)
Q Consensus 702 ~~~~--p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~Adv-gIa~ 745 (1051)
.+-. ...|...|+ + -.+++++||..+|..+-++|++ +|.+
T Consensus 140 ~~~~~~K~~rr~~Ik---~-y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 140 AGDKPGQNTKSQWLQ---D-KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp CCCCTTCCCSHHHHH---H-TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred ECCCCCCHHHHHHHH---H-CCEEEEECCCHHHHHHHHHCCCCCEEE
T ss_conf 179998237999999---7-496899659888876798759983575
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=94.28 E-value=0.072 Score=26.44 Aligned_cols=116 Identities=22% Similarity=0.188 Sum_probs=64.1
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCH--------HHHH-------HHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHH
Q ss_conf 9993289999999738957999747999--------9999-------999983998899876566447068721999999
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNK--------STAE-------AICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQ 689 (1051)
Q Consensus 625 ~~r~~~~~~I~~l~~~gi~v~i~TGd~~--------~ta~-------~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~ 689 (1051)
.+-+++.++++.|+++|+++.++|.... .... ...+..|+.-
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~----------------------- 104 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFV----------------------- 104 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCC-----------------------
T ss_pred EECCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----------------------
T ss_conf 763448999999986297579861654321445424344443367777766413553-----------------------
Q ss_pred HHHHHHCCCEEEEEE-------------------CCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCE-EEEECCCC
Q ss_conf 999973699299982-------------------8010999999996669999999599359998885990-18837885
Q 001568 690 IEALSKHGGKVFSRA-------------------EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI-GVAMGITG 749 (1051)
Q Consensus 690 ~~~~~~~~~~v~~~~-------------------~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~Adv-gIa~g~~~ 749 (1051)
..++... .|.--.+..+.+.-....+.||||..+|+.+=+.|++ +|.+. .|
T Consensus 105 --------~~~~~~~~~~~~~~~~~~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~-~g 175 (209)
T d2o2xa1 105 --------DMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLV-DG 175 (209)
T ss_dssp --------SEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEE-TC
T ss_pred --------CEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCEEEEE-CC
T ss_conf --------258874246445664212366402432015667677738994126895797889999998799489994-89
Q ss_pred CHHHHHCCCEEECC-CCCHHHHHHHH
Q ss_conf 28888503946137-99138999999
Q 001568 750 TEVAKEASDMVLAD-DNFGSIVSAVA 774 (1051)
Q Consensus 750 ~~~a~~~ad~vl~~-~~~~~i~~~i~ 774 (1051)
... ...+..... .++..+.+++.
T Consensus 176 ~~~--~~~~~~~~~~~~~~e~~dll~ 199 (209)
T d2o2xa1 176 EAA--VQPGFAIRPLRDSSELGDLLA 199 (209)
T ss_dssp CCE--EETTEEEEEESSHHHHHHHHH
T ss_pred CCC--CCCCCCCCCCCCHHHHHHHHH
T ss_conf 976--567755467630527879999
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=94.15 E-value=0.059 Score=27.07 Aligned_cols=62 Identities=13% Similarity=0.148 Sum_probs=38.1
Q ss_pred EEEECCHHHHHHHHHHHHCCCEEEEECCCCC-CHHHHHHCCE-EEEECCCC--CHHHH----HCCCEEECC
Q ss_conf 9982801099999999666999999959935-9998885990-18837885--28888----503946137
Q 001568 701 FSRAEPRHKQEIVRMLKEMGEVVAMTGDGVN-DAPALKLADI-GVAMGITG--TEVAK----EASDMVLAD 763 (1051)
Q Consensus 701 ~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~N-D~~~l~~Adv-gIa~g~~~--~~~a~----~~ad~vl~~ 763 (1051)
...-+|+--..+.+.+.-..+.++||||+.+ |+.+-++|++ +|.+. +| +.... ..+|+++.+
T Consensus 174 ~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~-~G~~~~~~l~~~~~~pd~i~~s 243 (250)
T d2c4na1 174 VGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVL-SGVSSLDDIDSMPFRPSWIYPS 243 (250)
T ss_dssp CSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEES-SSSCCGGGGSSCSSCCSEEESS
T ss_pred CCCCHHHHHHHHHHHHCCCCHHEEEECCCHHHHHHHHHHCCCCEEEEC-CCCCCHHHHHHCCCCCCEEECC
T ss_conf 134204667666666327803457846872779999998799899989-9999988997378999999899
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=93.91 E-value=0.13 Score=24.65 Aligned_cols=101 Identities=14% Similarity=0.048 Sum_probs=59.9
Q ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHC-CCEE
Q ss_conf 459999328999999973895799974799999999999839988998765664470687219999999999736-9929
Q 001568 622 LRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKH-GGKV 700 (1051)
Q Consensus 622 ~~d~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~v 700 (1051)
.++.+.+++.+.++.++++|+++.++|+++......+.+.++.. ......+... ....
T Consensus 33 ~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~---------------------~~~~~~~~~~~~~~~ 91 (149)
T d1ltqa1 33 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMT---------------------RKWVEDIAGVPLVMQ 91 (149)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHH---------------------HHHHHHTTCCCCSEE
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHH---------------------HHHHHHCCCCCEEEE
T ss_conf 40844878999999998444808999268578899999999997---------------------501333579867986
Q ss_pred EEE------ECCHHHHHHHHHHHHC-CCEEEEECCCCCCHHHHHHCCEEE
Q ss_conf 998------2801099999999666-999999959935999888599018
Q 001568 701 FSR------AEPRHKQEIVRMLKEM-GEVVAMTGDGVNDAPALKLADIGV 743 (1051)
Q Consensus 701 ~~~------~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~~l~~AdvgI 743 (1051)
+.+ ..+.-|..+...+... ..+++++||...|+.|.+.+++-.
T Consensus 92 ~~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~ 141 (149)
T d1ltqa1 92 CQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVEC 141 (149)
T ss_dssp EECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred ECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCE
T ss_conf 32555566770487899999732577755999869789999999879968
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=93.29 E-value=0.11 Score=25.26 Aligned_cols=124 Identities=10% Similarity=0.155 Sum_probs=80.8
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 99932899999997389579997479999999999983998899876566447068721999999999973699299982
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 704 (1051)
.+.+++.++++.+++.|+++.++|+-.........+..++....+. ++...+...- .-
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~----~~~s~~~~~~------------------KP 150 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDH----LLSVDPVQVY------------------KP 150 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE----EEESGGGTCC------------------TT
T ss_pred CCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCCC----EEEEEEEECC------------------CC
T ss_conf 2120107899988751785776421179999998741144553210----0222100014------------------50
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCC---CHHHHHCCCEEECCCCCHHHHHH
Q ss_conf 801099999999666999999959935999888599018837885---28888503946137991389999
Q 001568 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITG---TEVAKEASDMVLADDNFGSIVSA 772 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~AdvgIa~g~~~---~~~a~~~ad~vl~~~~~~~i~~~ 772 (1051)
.|+-=...++.+.-..+.+++|||...|+.+=+.|++-.+.-..+ .+.....+|+++.+ +..+.++
T Consensus 151 ~p~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~--l~el~~l 219 (220)
T d1zrna_ 151 DNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTS--LRAVVEL 219 (220)
T ss_dssp SHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESS--HHHHHTT
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEECC--HHHHHHH
T ss_conf 77889999998177871489980483769999986997999817998764336899999899--9999854
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.32 E-value=0.22 Score=23.03 Aligned_cols=142 Identities=17% Similarity=0.173 Sum_probs=83.9
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCC-----CCCCCCCCH---HHHCC-------CHHH--
Q ss_conf 993289999999738957999747999999999998399889987-----656644706---87219-------9999--
Q 001568 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNED-----LTGRSFTGK---EFMAL-------SSTQ-- 688 (1051)
Q Consensus 626 ~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~-----~~~~~~~~~---~~~~l-------~~~~-- 688 (1051)
+-|++.++++.+++. ...+++|-.-.+-..++|+.+|+... .. ++...+... ++..+ +-++
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e-~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~ 159 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGE-LHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELF 159 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSE-EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred ECCCHHHHHHHHHHH-CCCEEEECCHHHHHHHHHHHCCCCCE-EECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 268889999999864-88479853589999999853588740-1002344312478717799998876530375377889
Q ss_pred -----------HHHHHHHCCCEEEEEECCHHHHHHHHHHHHC--CCEEEEECCCCCCHHHHHHCCE--EEEECCCCCHHH
Q ss_conf -----------9999973699299982801099999999666--9999999599359998885990--188378852888
Q 001568 689 -----------QIEALSKHGGKVFSRAEPRHKQEIVRMLKEM--GEVVAMTGDGVNDAPALKLADI--GVAMGITGTEVA 753 (1051)
Q Consensus 689 -----------~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~~l~~Adv--gIa~g~~~~~~a 753 (1051)
...++..-+.+ --..|..+++..-.. -...+++||+..|+.||+.|.= |+|+.-+|.+-+
T Consensus 160 e~~d~~f~~~e~~~i~e~Vk~V-----Ggg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Ya 234 (308)
T d1y8aa1 160 RKLDELFSRSEVRKIVESVKAV-----GAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYA 234 (308)
T ss_dssp HHHHHHHHSHHHHHHHHTCBCC-----CHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHH
T ss_pred HHHHHHHCCCHHHHHHHHHCCC-----CCCHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 9999871311576687640214-----78516789986336126986412367533278999974479836885686244
Q ss_pred HHCCCEEECCCCCHHHHHHHH
Q ss_conf 850394613799138999999
Q 001568 754 KEASDMVLADDNFGSIVSAVA 774 (1051)
Q Consensus 754 ~~~ad~vl~~~~~~~i~~~i~ 774 (1051)
...|++.+.+.+...+..++.
T Consensus 235 l~eA~VaiiS~~~~a~~~i~d 255 (308)
T d1y8aa1 235 LKHADVVIISPTAMSEAKVIE 255 (308)
T ss_dssp HTTCSEEEECSSTHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHH
T ss_conf 453446896663357889999
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=91.79 E-value=0.074 Score=26.36 Aligned_cols=113 Identities=12% Similarity=0.102 Sum_probs=69.5
Q ss_pred CCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEE
Q ss_conf 99993289999999738957999747999999999998399889987656644706872199999999997369929998
Q 001568 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (1051)
Q Consensus 624 d~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~ 703 (1051)
.++-+++.+.++.|++.|+++.++|+... +....+..|+...... ++.+.+... ..
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~----i~~~~~~~~------------------~K 145 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDA----IADPAEVAA------------------SK 145 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSE----ECCTTTSSS------------------CT
T ss_pred CCCCCCCEECCCCCCCCCCCEEEEEECCH--HHHHHHHHCCCCCCCC----CCCCCCCCC------------------CC
T ss_conf 20258740102212224442489963231--3578876356643331----111111111------------------23
Q ss_pred ECCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCE-EEEECCCCCHHHHHCCCEEECC
Q ss_conf 28010999999996669999999599359998885990-1883788528888503946137
Q 001568 704 AEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI-GVAMGITGTEVAKEASDMVLAD 763 (1051)
Q Consensus 704 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~Adv-gIa~g~~~~~~a~~~ad~vl~~ 763 (1051)
-.|+-=....+.++-..+.++||||..+|+.+-+.|++ +|.++ .+ .....++.++.+
T Consensus 146 P~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~-~~--~~~~~~~~~~~~ 203 (221)
T d1o08a_ 146 PAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVG-RP--EDLGDDIVIVPD 203 (221)
T ss_dssp TSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEES-CH--HHHCSSSEEESS
T ss_pred CCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCEEEEEC-CH--HHCCCCCEECCC
T ss_conf 57588888898739887407999669888999998699899999-81--124656477588
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=91.22 E-value=0.073 Score=26.43 Aligned_cols=65 Identities=23% Similarity=0.219 Sum_probs=42.5
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCC-CHHHHHHCCE-EEEECCCC---CHHHHHC---CCEEECC
Q ss_conf 9299982801099999999666999999959935-9998885990-18837885---2888850---3946137
Q 001568 698 GKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVN-DAPALKLADI-GVAMGITG---TEVAKEA---SDMVLAD 763 (1051)
Q Consensus 698 ~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~N-D~~~l~~Adv-gIa~g~~~---~~~a~~~---ad~vl~~ 763 (1051)
...+..-+|+--....+.++-..+.++||||..+ |+.+=++|++ +|.+. +| .+..... .|+++.+
T Consensus 175 ~~~~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~-~G~~~~~~~~~~~~~PD~vi~s 247 (253)
T d1wvia_ 175 PIIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVT-TGFTKPEEVPALPIQPDFVLSS 247 (253)
T ss_dssp CEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEES-SSSSCTTTGGGCSSCCSEEESC
T ss_pred EEEECCCCCCCCEEHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEEC-CCCCCHHHHHHCCCCCCEEECC
T ss_conf 478416774200110011034545169982780777999998799799989-8999978886368999889899
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=89.33 E-value=0.4 Score=21.15 Aligned_cols=106 Identities=9% Similarity=0.043 Sum_probs=65.5
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCC----CHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEE
Q ss_conf 99932899999997389579997479----99999999998399889987656644706872199999999997369929
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGD----NKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKV 700 (1051)
Q Consensus 625 ~~r~~~~~~I~~l~~~gi~v~i~TGd----~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v 700 (1051)
.+.+++.+.++.|+++|+++.++|+- ............|+....+ .++...+...-
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd----~i~~s~~~~~~---------------- 156 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFD----FLIESCQVGMI---------------- 156 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCS----EEEEHHHHSCC----------------
T ss_pred CCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHC----EEEEHHHCCCC----------------
T ss_conf 8880099999999865994577520111118999999987468075511----10005441377----------------
Q ss_pred EEEECCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCE-EEEECCCCCHHH
Q ss_conf 99828010999999996669999999599359998885990-188378852888
Q 001568 701 FSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI-GVAMGITGTEVA 753 (1051)
Q Consensus 701 ~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~Adv-gIa~g~~~~~~a 753 (1051)
.-.|+--...++.++-..+.++||||...|+.+=+.|++ +|-+. ++.+..
T Consensus 157 --KP~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~-~~~~~~ 207 (222)
T d1cr6a1 157 --KPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVH-NTASAL 207 (222)
T ss_dssp --TTCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECC-SSSHHH
T ss_pred --CCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCEEEEEC-CCCHHH
T ss_conf --998277778888728986328999779887999998599899989-940489
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=87.14 E-value=0.15 Score=24.23 Aligned_cols=26 Identities=23% Similarity=0.273 Sum_probs=19.7
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 99932899999997389579997479
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGD 650 (1051)
Q Consensus 625 ~~r~~~~~~I~~l~~~gi~v~i~TGd 650 (1051)
.+-|++.++++.|++.|++++++|..
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred EECCCHHHHHHHHHHCCCCEEEECCC
T ss_conf 68755999999998738730110464
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.63 E-value=0.048 Score=27.69 Aligned_cols=100 Identities=11% Similarity=-0.009 Sum_probs=58.4
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHH----HHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEE
Q ss_conf 99932899999997389579997479999999----99998399889987656644706872199999999997369929
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAE----AICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKV 700 (1051)
Q Consensus 625 ~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~----~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v 700 (1051)
.+.+++.+.++.|++.|++++++|+....... ......++.... ..++.+.+...-
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~f----d~i~~s~~~~~~---------------- 158 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHF----DFLIESCQVGMV---------------- 158 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTS----SEEEEHHHHTCC----------------
T ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHC----CEEEECCCCCCC----------------
T ss_conf 788019999999986348633454341240899999876525738666----389951223343----------------
Q ss_pred EEEECCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCE-EEEEC
Q ss_conf 99828010999999996669999999599359998885990-18837
Q 001568 701 FSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI-GVAMG 746 (1051)
Q Consensus 701 ~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~Adv-gIa~g 746 (1051)
.-.|+-=..+++.+.-....+++|||...|+.+-++|++ +|.+.
T Consensus 159 --KP~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 159 --KPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp --TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred --HHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCEEEEEC
T ss_conf --047788887763015686510588168887999998699899989
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=85.07 E-value=0.69 Score=19.51 Aligned_cols=125 Identities=10% Similarity=0.133 Sum_probs=75.8
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 99932899999997389579997479999999999983998899876566447068721999999999973699299982
Q 001568 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (1051)
Q Consensus 625 ~~r~~~~~~I~~l~~~gi~v~i~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 704 (1051)
.+.+++.+.++.++. +..++|+-....+..+-+.+|+...... .+..+...... .+.-
T Consensus 85 ~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~~---~~~~~~~~~~~----------------~~KP 142 (222)
T d2fdra1 85 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAP---HIYSAKDLGAD----------------RVKP 142 (222)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTT---CEEEHHHHCTT----------------CCTT
T ss_pred CHHHHHHHHHHHCCC---CCEEEEECCHHHHHHHHCCCCCCCCCCE---EECCCCCCCCC----------------CCCC
T ss_conf 113457887651032---3225641204555554302344433210---00123211244----------------3445
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEE-EEECCCCC--------HHHHHCCCEEECCCCCHHHHHHHH
Q ss_conf 80109999999966699999995993599988859901-88378852--------888850394613799138999999
Q 001568 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG-VAMGITGT--------EVAKEASDMVLADDNFGSIVSAVA 774 (1051)
Q Consensus 705 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~Advg-Ia~g~~~~--------~~a~~~ad~vl~~~~~~~i~~~i~ 774 (1051)
.|+.=....+.+.-..+.+++|||+.+|+.+=+.|++- |.+. .+. +....-+|+++.+ +..+..++.
T Consensus 143 ~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~-~~~~~~~~~~~~l~~~~ad~vi~~--l~eL~~ll~ 218 (222)
T d2fdra1 143 KPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVISR--MQDLPAVIA 218 (222)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEC-CCCCCCCCHHHHHHHCCCCEEECC--HHHHHHHHH
T ss_conf 8899987787508987328997587878999998499899983-698787531778976799999999--999999999
|