Citrus Sinensis ID: 001663

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030-----
MPTSFCLLISLASFLILSCAPIIPSSCTPVASRRILHQPFFPLGAVPPSPPPSPAPPPPPPPTRKVPFSDTSTPNNSPFFPTYPSPPPPPSPANFASFPANISSLILPRSPEKPKRSSQKLLILAFASVSSALVVGGILVFFYCRKRRQNGLLYCTADVKSNTTNSNINSNNSSIRIYPPPPANADATRNAHKLRTNRTSSSSEFLYLGTLVNSRAGIDDSTTDTDSRGDTNCVSPELRPLPPLSQQASFKEDQRPRADVASSVAEDEDEEFYSPRVSLGGTGTGSGSRRDFAAVAVDGEGVGGRNSESSSCSCSSTSSRSLTASISPPISLSPRRSEPISPEATHAMPTQSVFAMMSPMESSPDRNIIKSPSLSIASTSPDTRLSPSRFNLLNRHELSSASTSPERELKKDLDNKSSKLFNVLVNNANVGGSPLEKKKDLSPSSSSASSLSSASASPDRFSKKSENASPSRLNESSLSSSPDESPRMLNVFGQISSPVRTNDALEQPISVPPPPPPPPPPPPPPLVLSRQRKQWELPVVSTPAGQAVSQPPALIPPSRPFVMQNTTKVSPVELPPSSKTEESVEEEALKPKLKPLHWDKVRASSDREMVWDHLRSSSFKLNEEMIETLFIVNTPSSKPSQTTPRTVLPTPNSENRVLDPKKSQNIAILLRALNVTIEEVCEALLEGNADTLGTELLESLLKMAPTKEEERKLKEYKDESLTKLGPAEKFLKAVLDVPFAFKRVDAMLYITNFESEVEYLKKSFETLEAACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARQSGANQNPNSSLSDDAKCRKLGLQVVSGLSSELSNVKKAAAMDSDVLSSEVSKLSRGLGNIGEVVQLNEAMGMDESRKKFSESMNRFMKMAEEEIIRIQAHESVALSLVKEITEYFHGNSAREEAHPFRIFMVVRDFLTVLDRVCKEVGMINERTIISNAHKFPVPVNPTLPQVFSEIQGRRQCSSSDDESTSP
cccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccEEEEccHHHHHHHHHHHHccccHHHHHHHHHccccccccHHHHHHHHHHcccHHHHHHHHHccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccHHHHHHHcccccccccccccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHcccccccccccccc
**TSFCLLISLASFLILSCAPIIPSSCTPVASRRILHQPFFPL*****************************************************************************LLILAFASVSSALVVGGILVFFYCRKRRQN******************************************************FLYLGTLVN**********************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************LHWDKVRASSDREMVWDHLRSSSFKLNEEMIETLFIV*************************LDPKKSQNIAILLRALNVTIEEVCEALLEGNADTLGTELLESLLKMAPTKEEERKLKEYKDESLTKLGPAEKFLKAVLDVPFAFKRVDAMLYITNFESEVEYLKKSFETLEAACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGA*************SDDAKCRKLGLQVVSGLSSELSNVKKAAAMDSDVLSSEVSKLSRGLGNIGEV***************FSESMNRFMKMAEEEIIRIQAHESVALSLVKEITEYFHGNSAREEAHPFRIFMVVRDFLTVLDRVCKEVGMINER****************************************
xxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MPTSFCLLISLASFLILSCAPIIPSSCTPVASRRILHQPFFPLGAVPPSPPPSPAPPPPPPPTRKVPFSDTSTPNNSPFFPTYPSPPPPPSPANFASFPANISSLILPRSPEKPKRSSQKLLILAFASVSSALVVGGILVFFYCRKRRQNGLLYCTADVKSNTTNSNINSNNSSIRIYPPPPANADATRNAHKLRTNRTSSSSEFLYLGTLVNSRAGIDDSTTDTDSRGDTNCVSPELRPLPPLSQQASFKEDQRPRADVASSVAEDEDEEFYSPRVSLGGTGTGSGSRRDFAAVAVDGEGVGGRNSESSSCSCSSTSSRSLTASISPPISLSPRRSEPISPEATHAMPTQSVFAMMSPMESSPDRNIIKSPSLSIASTSPDTRLSPSRFNLLNRHELSSASTSPERELKKDLDNKSSKLFNVLVNNANVGGSPLEKKKDLSPSSSSASSLSSASASPDRFSKKSENASPSRLNESSLSSSPDESPRMLNVFGQISSPVRTNDALEQPISVPPPPPPPPPPPPPPLVLSRQRKQWELPVVSTPAGQAVSQPPALIPPSRPFVMQNTTKVSPVELPPSSKTEESVEEEALKPKLKPLHWDKVRASSDREMVWDHLRSSSFKLNEEMIETLFIVNTPSSKPSQTTPRTVLPTPNSENRVLDPKKSQNIAILLRALNVTIEEVCEALLEGNADTLGTELLESLLKMAPTKEEERKLKEYKDESLTKLGPAEKFLKAVLDVPFAFKRVDAMLYITNFESExxxxxxxxxxxxxxxxxxxxxRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARQSGANQNPNSSLSDDAKCRKLGLQVVSGLSSELSNVKKAAAMDSDVLSSEVSKLSRGLGNIGEVVQLNEAMGMDESRKKFSESMNRFMKMAEEEIIRIQAHESVALSLVKEITEYFHGNSAREEAHPFRIFMVVRDFLTVLDRVCKEVGMINERTIISNAHKFPVPVNPTLPQVFSEIQGRRQCSSSDDESTSP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Formin-like protein 1 probableQ8S0F0
Formin-like protein 1 Might be involved in the organization and polarity of the actin cytoskeleton. Involved in polar pollen cell growth process by maintaining tip-focused cell membrane expansion for the polar extension of pollen tubes.probableQ9SE97

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3OBV, chain E
Confidence level:very confident
Coverage over the Query: 590-640,662-836,847-850,867-995
View the alignment between query and template
View the model in PyMOL