Citrus Sinensis ID: 001677

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030---
MATSEDKQIPRVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNWERRGRPNNSPQQQQKDYNDALKELQLQLSNGISLKDLQSSHMTASTKPVFKNKEQIRYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDKVKWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKIYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSSSALPSIPRGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKVLSLFQED
cccccccccccEEEEEEcccEEEEEEEEccccccEEEEEEEEEEccccEEEEEEEEEcccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEEEcccccccccccccEEEEccccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccHHHHHHHccccccccEEEEEEEEccEEEEEEEEEcccEEEEEEEcccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccEEEEEEEcccccccccEEEEEccccEEEcccccEEEccccccccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccEEEEccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccHHHHHHHHHHcccHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccEEEEEEEEEccccccccccccccEEEEEccccccccccccEEEEEccccccccHHHHHHHcccccEEEEEccHHHHHHHHHHccccEEEEEccccEEEEEcccccccccccccccccccccccccccccccEEcccccccccccHHHHHHHHHHHHcccccccccccEEcccHHHHHHcccccccccccccc
cccccccccccccEEEcccccEEEEEEEccccccEEEEEEEEEcccccEEEEEEEEccccccEEccccccccccccccccccccEEEEEEEEccccccEEEEEEEEcccccEEEcccccEEEEccccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccccccccccccccccHHHHcccHHHHHHHHcccccccccccHHHHHHHHHHHcccccEEEEEEEEcccEEEEEEEEccccEEEEEEEcccccEEEEEEEEcccccccccccccccccccEEccccEEccccccccccccEEEEEEEcccccEEEEEEEEEcccEEEEcccccEEEEcccccccHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcHHccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHcccccccHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHcccccccccccccHHHHcHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccEEEEEEEEccccccccccccccEEEEEEcccccccccccEEEEEccccccHHHHHHHHHHcccEEEEEEccHHHHHHHHHHcccEEEEEEccccEEEEEcccHHHccccccccccccccEEEEccccccEEEcHHHccHcHccHHHHHHHHHHccccccccccccEEEcccHHHHHHHcccccccEEEEcc
matsedkqiprvhnfelvegMKLQInasgssigrnvRVQFQLRNCARTWILHWGFlyrgntnwfipaehpkqgalqtpfvksgEIYLVTIELRDPKIHAIEFILKDGihdrwlrlnhgnfrieipeidtntclqpipKDLIELRAYQnwerrgrpnnspqqqQKDYNDALKELQLQLSngislkdlqsshmtastkpvfknkeqirygvpsypcrrhdVEKWLQKnykghvktntlpssSFVALVENslgadnvisrqsyhmDHEIVVLSKIISSDYHILVAVNMKGAAILHwgiskcspgewlspppdmlpekskmVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSggswiknngenffvglhpmdpkdknfvskvdgddKVKWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLtwnknynvkpreiSEAQDRFTNLLQKIYSSQPNDREIVRLIMAFVgrggqgdvgqRIRDEILVIQRNngcktgmmEEWHQklhnntspddIIICEALLNYIRCGFKIDAYWQTlnchglskqklasydrpivseprfradAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKghnsvisdsfgSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGlkdlnfshppEIMFFISLLLESLClsvvnnedliyctkdwyrvsesyRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQnkvyrrptiiiasritgeeeipvGVVAVltpdmpdvlshvsirarnnkvcfatcFDQNILRNLRLKEGKAVSIRLKSTNLIISDisssnlslsssalpsiprgitfkrKIFRgkyavsvedftpdmvgakscNIKFLRervpswikiptsvaipfgafETVLSENINKVLSLFQED
matsedkqiprvhNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFrieipeidtntclqpIPKDLIELRAYQNWErrgrpnnspqQQQKDYNDALKELQLQLSNGISLKDLQSSHMTastkpvfknkeqirYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDKVKWLLDEISCREKEAERSLMHRFNIAAelterckgEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKiyssqpndrEIVRLIMAFVGrggqgdvgqriRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSkqklasydrpivseprfradakesLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGtargrakdLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSqtyqkkfqpsvKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELitlqnkvyrrPTIIiasritgeeeiPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDisssnlslsssalpsiprgitfkrkiFRGKYAvsvedftpdmvgAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKVLSLFQED
MATSEDKQIPRVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNWERRGRPNNSPQQQQKDYNDALKELQLQLSNGISLKDLQSSHMTASTKPVFKNKEQIRYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDKVKWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKIYSSQPNDREIVRLIMAFvgrggqgdvgqrirdEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFIsllleslclsVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKstnliisdisssnlslsssalpsiPRGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKVLSLFQED
***********VHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNW*****************************************************EQIRYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWL************MVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDKVKWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKIYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVS**********SLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDI*************SIPRGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKVLSL****
*************NFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWF*****************SGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFRI****************DLIELRAYQNWERRGR**************ALKEL**QL*******************************************************************VENSLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFFV**********************KWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKIYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIET*********SDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRV***********ALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTN********************************RGKYAV**E*******GA**CNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKV***F***
********IPRVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNWERR***********KDYNDALKELQLQLSNGISLKDLQSSHMTASTKPVFKNKEQIRYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDKVKWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKIYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSSSALPSIPRGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKVLSLFQED
*********PRVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNWERRGRPNNSPQQQQKDYNDALKELQLQLSNGISLKDLQSSHM******************PSYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFFVGLHPMDP*********DGDDKVKWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKIYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSS*************RGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKVLSLF***
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MATSEDKQIPRVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGNTNWFIPAEHPKQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNWERRGRPNNSPQQQQKDYNDALKELQLQLSNGISLKDLQSSHMTASTKPVFKNKEQIRYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDKVKWLLDEISCREKEAERSLMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQKIYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSSSALPSIPRGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKVLSLFQED
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1033 2.2.26 [Sep-21-2011]
Q9STV0 1278 Alpha-glucan water dikina yes no 0.973 0.787 0.615 0.0
Q9AWA5 1464 Alpha-glucan water dikina N/A no 0.975 0.688 0.433 0.0
Q8LPT9 1475 Alpha-glucan water dikina N/A no 0.887 0.621 0.476 0.0
Q9SAC6 1399 Alpha-glucan water dikina no no 0.954 0.704 0.458 0.0
Q6ZY51 1196 Phosphoglucan, water diki no no 0.477 0.412 0.238 5e-20
Q2QTC2 1206 Phosphoglucan, water diki no no 0.282 0.242 0.249 4e-17
Q94A41887 Alpha-amylase 3, chloropl no no 0.145 0.169 0.260 0.0007
>sp|Q9STV0|GWD2_ARATH Alpha-glucan water dikinase 2 OS=Arabidopsis thaliana GN=GWD2 PE=2 SV=3 Back     alignment and function desciption
 Score = 1299 bits (3362), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1034 (61%), Positives = 801/1034 (77%), Gaps = 28/1034 (2%)

Query: 1    MATSEDKQIPRVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGN 60
            MATS+ +Q      F+L+EGM+LQI  +G   G +VR +F L+NC R WILHWG +Y+GN
Sbjct: 1    MATSKSQQ------FQLIEGMELQITVTGLPNGSSVRAEFHLKNCTRAWILHWGCIYQGN 54

Query: 61   TNWFIPAEHP-KQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGN 119
             +W+IP+EH  KQGALQT FVKSG+ Y+V +ELRDP++ AIEF+LKDG H+RWLR ++GN
Sbjct: 55   NHWYIPSEHSSKQGALQTTFVKSGDAYVVILELRDPRVRAIEFVLKDGSHNRWLRQHNGN 114

Query: 120  FRIEIPEIDTNTCLQPIPKDLIELRAYQNWERRGRPNNSPQQQQKDYNDALKELQLQLSN 179
            FR+EIP  D +     IPK LIE RA++ W+R+GRP +S ++QQ DY++A++EL  +L+ 
Sbjct: 115  FRVEIPWNDLH-AHHRIPKTLIERRAHKIWDRKGRPQSSAREQQIDYDNAVRELHAELAR 173

Query: 180  GISLKDLQSSHMTASTKPVFKNK--EQIRYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLP 237
            GISL +LQ++    ST PV K +  E     + SY  R+HDV+KWLQK  +   ++ ++ 
Sbjct: 174  GISLDELQAN----STVPVEKEETSEPHHTMIQSYR-RKHDVQKWLQKYTEPINRSGSVK 228

Query: 238  SSSFVALVENSLGADNVISRQSYHM-DHEIVVLSKIISSDYHILVAVNMKGAAILHWGIS 296
            SS+   L + S+G +N++S++S+H+ ++EI VL + +  D  + +A NM G  +LHWG++
Sbjct: 229  SSALAELSKRSVGQENLVSQKSFHVRNYEITVLQRDVKGDCRLWIATNMAGPTVLHWGVA 288

Query: 297  KCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIW 356
            K S GEWL PPPD+LPEKSK V GACQT FTD+++   S+Q +D+NL++  FVGIQFVIW
Sbjct: 289  KSSAGEWLIPPPDVLPEKSKFVHGACQTQFTDMSSREHSYQFIDINLKRGGFVGIQFVIW 348

Query: 357  SGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDK--VKWLLDEISCREKEAERSLMHR 414
            SGG W+ NNG NF V L   D        K+D D+K  +KWLLDEIS REKEAERSLMHR
Sbjct: 349  SGGYWVNNNGANFVVNLKSADSTS----GKLDVDEKYVLKWLLDEISEREKEAERSLMHR 404

Query: 415  FNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQK 474
            FNIA ELTERCK EGE G I IMVWMRFMA RHLTWNKNYNVKPREISEA +RFTNL++K
Sbjct: 405  FNIATELTERCKDEGEGGCIGIMVWMRFMATRHLTWNKNYNVKPREISEALERFTNLMEK 464

Query: 475  IYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNT 534
            IY  QPN REIVRL MA VGRGGQGDVGQRIRDEILVIQRNN CK+GMMEEWHQKLHNN+
Sbjct: 465  IYLQQPNKREIVRLTMALVGRGGQGDVGQRIRDEILVIQRNNHCKSGMMEEWHQKLHNNS 524

Query: 535  SPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLT 594
            S DD+IICEALLNY+R  F+IDAYWQTL  +GL+K++LASYDRPIVSEPRFR+D+KE L 
Sbjct: 525  SADDVIICEALLNYVRSDFRIDAYWQTLQTNGLTKERLASYDRPIVSEPRFRSDSKEGLI 584

Query: 595  RDLTMYLKTLKAVHSGADLESAIETCY---KGHNSVISDSFGSLSSKLRECLTFIKAHIH 651
            RDLTMYLKTLKAVHSGADLESAI+T     KGH+     +   LS KL++ L  +K  + 
Sbjct: 585  RDLTMYLKTLKAVHSGADLESAIDTFLSPSKGHHVF---AVNGLSPKLQDLLNLVKRLVR 641

Query: 652  DESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPP 711
            +E+   L+EKLVD+RI+LHP L   R RAKDLLFLDI+L S  KTT+E+ L  LNF++PP
Sbjct: 642  EENTEPLIEKLVDARIQLHPALRAPRTRAKDLLFLDIALESCFKTTIEKRLISLNFNNPP 701

Query: 712  EIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLA 771
            EI++ I ++LE+LCLS+VNNE++I+CTKDWYRVSE+YR +D QWALQ KA+LDRLQLVLA
Sbjct: 702  EIIYVICVVLENLCLSIVNNEEIIFCTKDWYRVSEAYRPHDVQWALQTKAVLDRLQLVLA 761

Query: 772  ERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVAN 831
            +R Q Y    QP+ KYLG LL V+K+ ID FTEE++RA   AVLS L+NRF+P LRK+AN
Sbjct: 762  DRCQHYFTIIQPTAKYLGQLLRVDKHGIDVFTEEVIRAGPGAVLSTLVNRFDPSLRKIAN 821

Query: 832  LGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMP 891
            LGCWQVIS  +  GF+  VNELI +QNK Y +PT+IIAS++TGEEEIP GVVAVLTP M 
Sbjct: 822  LGCWQVISSADAYGFVVCVNELIVVQNKFYSKPTVIIASKVTGEEEIPAGVVAVLTPSMI 881

Query: 892  DVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSS 951
            DVLSHVSIRARN+K+CFATCFDQN+L NL+ KEG+A+SI  KST L+ISD ++S++S+  
Sbjct: 882  DVLSHVSIRARNSKICFATCFDQNVLSNLKSKEGRAISIHTKSTGLVISDGNNSDVSVRH 941

Query: 952  SALPSIPRGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIP 1011
              + S+PRG+  K K F G Y +S ++FT + VG+KS NIKFLRERVPSWIKIPTS A+P
Sbjct: 942  IFISSVPRGVISKGKKFCGHYVISSKEFTDERVGSKSYNIKFLRERVPSWIKIPTSAALP 1001

Query: 1012 FGAFETVLSENINK 1025
            FG FE +LS++ NK
Sbjct: 1002 FGTFENILSDDSNK 1015
Mediates the incorporation of phosphate into alpha-glucan, mostly at the C-6 position of glucose units.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 9EC: .EC: 4
>sp|Q9AWA5|GWD1_SOLTU Alpha-glucan water dikinase, chloroplastic OS=Solanum tuberosum GN=R1 PE=1 SV=2 Back     alignment and function description
>sp|Q8LPT9|GWD1_CITRE Alpha-glucan water dikinase, chloroplastic OS=Citrus reticulata GN=R1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SAC6|GWD1_ARATH Alpha-glucan water dikinase 1, chloroplastic OS=Arabidopsis thaliana GN=GWD1 PE=1 SV=2 Back     alignment and function description
>sp|Q6ZY51|PWD_ARATH Phosphoglucan, water dikinase, chloroplastic OS=Arabidopsis thaliana GN=GWD3 PE=1 SV=1 Back     alignment and function description
>sp|Q2QTC2|PWD_ORYSJ Phosphoglucan, water dikinase, chloroplastic OS=Oryza sativa subsp. japonica GN=GWD3 PE=3 SV=2 Back     alignment and function description
>sp|Q94A41|AMY3_ARATH Alpha-amylase 3, chloroplastic OS=Arabidopsis thaliana GN=AMY3 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1033
255572858 1228 alpha-glucan water dikinase, chloroplast 0.925 0.778 0.643 0.0
28393438 1278 unknown protein [Arabidopsis thaliana] 0.973 0.787 0.616 0.0
79485345 1278 phosphoglucan, water dikinase [Arabidops 0.973 0.787 0.615 0.0
297803668 1291 ATGWD2/GWD3 [Arabidopsis lyrata subsp. l 0.978 0.783 0.609 0.0
5051787 1288 putative protein [Arabidopsis thaliana] 0.943 0.756 0.585 0.0
168001040 1341 predicted protein [Physcomitrella patens 0.971 0.748 0.454 0.0
302765535 1309 hypothetical protein SELMODRAFT_266998 [ 0.942 0.744 0.454 0.0
302801007 1309 hypothetical protein SELMODRAFT_233951 [ 0.942 0.744 0.450 0.0
168025388 1338 predicted protein [Physcomitrella patens 0.969 0.748 0.451 0.0
13124867 1464 starch associated protein R1 [Solanum tu 0.975 0.688 0.434 0.0
>gi|255572858|ref|XP_002527361.1| alpha-glucan water dikinase, chloroplast precursor, putative [Ricinus communis] gi|223533280|gb|EEF35033.1| alpha-glucan water dikinase, chloroplast precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1329 bits (3439), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 668/1038 (64%), Positives = 798/1038 (76%), Gaps = 82/1038 (7%)

Query: 1    MATSEDKQIPRVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGN 60
            MA+S   + PRV +F+LV+GM+ QIN SGS  GRNVR++ QL+NC RTWILHWG ++ GN
Sbjct: 1    MASS---KTPRVKHFQLVDGMQFQINVSGSLKGRNVRIELQLKNCTRTWILHWGCVFHGN 57

Query: 61   TNWFIPAEHP-----KQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRL 115
             NWFIP         KQGAL+TPF KSGE Y+V IELRDP +HAIEF+LKDG  +RW+RL
Sbjct: 58   PNWFIPTGQSSGTSYKQGALETPFTKSGEFYVVNIELRDPTLHAIEFVLKDGGSNRWMRL 117

Query: 116  NHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNWERRGRPNNSPQQQQKDYNDALKELQL 175
            N+GNFR+++P+ D NT   P+PKDLI+ +AY  WE +GRP  +P+QQ++DY+DA++ELQ 
Sbjct: 118  NNGNFRVDLPDHDENTIHPPVPKDLIQHKAYLIWESKGRPVRTPEQQKQDYDDAVRELQN 177

Query: 176  QLSNGISLKDLQSSHMTAST--KPVFKNKEQIRYGVPSYPCRRHDVEKWLQKNYKGHVKT 233
            QL  G SL D+QSS ++AST  K +  ++EQ      SY CRRHDV+ WL K+  GH ++
Sbjct: 178  QLIRGTSLNDVQSSCISASTNTKALADSREQSSCVHSSY-CRRHDVDHWLHKHSVGHERS 236

Query: 234  NTLPSSSFVALVENSLGADNVISRQSYHM-DHEIVVLSKIISSDYHILVAVNMKGAAILH 292
              +P S+F+ LVE + G D +++ Q++H+ ++EIVVL+K+I  D H LVAVN KG  +LH
Sbjct: 237  TNMPFSAFMDLVERTTGGDKIVTGQNHHVSNYEIVVLNKVIKGDNHTLVAVNSKGTIVLH 296

Query: 293  WGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQ 352
            WG+SK SPGEWL+PP D+LPE+S ++A ACQTYFT+I+T +GSFQ               
Sbjct: 297  WGVSKLSPGEWLAPPSDILPERSTLLAYACQTYFTEISTGKGSFQ--------------- 341

Query: 353  FVIWSGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDK--VKWLLDEISCREKEAERS 410
                                              VDGD K  VKWLLDEI  RE EAERS
Sbjct: 342  ----------------------------------VDGDGKQIVKWLLDEIYRREIEAERS 367

Query: 411  LMHRFNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTN 470
            LM RFNIA EL ERCK EGE GLI I+VW+RFMACRHL WNKNYNVKPREISEAQD+FTN
Sbjct: 368  LMLRFNIATELMERCKFEGESGLIGILVWLRFMACRHLMWNKNYNVKPREISEAQDKFTN 427

Query: 471  LLQKIYSSQPNDREIVRLIMAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKL 530
            LLQKIY SQPN+REI+RLIM  VGRGGQGDVGQRIRDEILVIQRNN CKTGMMEEWHQKL
Sbjct: 428  LLQKIYLSQPNNREIMRLIMLCVGRGGQGDVGQRIRDEILVIQRNNDCKTGMMEEWHQKL 487

Query: 531  HNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAK 590
            HNN+SPDD+IICEALLNYIRCGF+ DAYWQTLN +GL+K+ LASYDRPIVSEP F   AK
Sbjct: 488  HNNSSPDDVIICEALLNYIRCGFRADAYWQTLNANGLTKEMLASYDRPIVSEPHFNTAAK 547

Query: 591  ESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHI 650
            E LTRDLT+YL+TLKAVHSGADLESAIETC        S  F     KL+E + +   + 
Sbjct: 548  EGLTRDLTLYLRTLKAVHSGADLESAIETCLGP-----SSKF-----KLKEIILYDLIY- 596

Query: 651  HDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHP 710
                     +KL++SRIEL  VL T+  RAKDLLF D++L SAI+T ME  LK L+F   
Sbjct: 597  --------FQKLLESRIELRLVLLTSSERAKDLLFFDVALDSAIRTIMESRLKHLSFDRL 648

Query: 711  PEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVL 770
             +IMF+ISL+LE+LCL+ VNNEDLI C KDWYRV ESY+ ND QWALQ KA+LDRLQL+L
Sbjct: 649  QDIMFYISLVLENLCLTTVNNEDLICCIKDWYRVRESYKANDVQWALQTKAVLDRLQLIL 708

Query: 771  AERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVA 830
            A+RS  YQKK QPS +YLG LLG+ K VID FTEEL+RA S  +LS L+NRF+PVLRKVA
Sbjct: 709  ADRSLNYQKKIQPSAQYLGKLLGIGKSVIDMFTEELIRAGSATILSTLVNRFDPVLRKVA 768

Query: 831  NLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDM 890
            +LGCWQVISPVEVCGF+T VNELIT+QN+VYR+PT+IIA+R++GEEEIP GVVAVLTPDM
Sbjct: 769  SLGCWQVISPVEVCGFVTCVNELITIQNRVYRKPTVIIANRVSGEEEIPEGVVAVLTPDM 828

Query: 891  PDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLS 950
            PD+LSHVSIRARN+KVCFATCFDQNIL+NL+LKEGKA+SI LKS NLIISDIS SNLSL+
Sbjct: 829  PDILSHVSIRARNSKVCFATCFDQNILKNLKLKEGKAISISLKSMNLIISDISGSNLSLN 888

Query: 951  SSALPSIPRGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAI 1010
            SS   SI R +TFKRK F GKYA+SVE+FT +MVGAKSCNIKFLR++VPSWIKIP SVA+
Sbjct: 889  SSICTSIARPVTFKRKTFYGKYAISVEEFTAEMVGAKSCNIKFLRKKVPSWIKIPISVAL 948

Query: 1011 PFGAFETVLSENINKVLS 1028
            PFG FE VLSENINK L+
Sbjct: 949  PFGTFEAVLSENINKDLA 966

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|28393438|gb|AAO42141.1| unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|79485345|ref|NP_194176.3| phosphoglucan, water dikinase [Arabidopsis thaliana] gi|332278206|sp|Q9STV0.3|GWD2_ARATH RecName: Full=Alpha-glucan water dikinase 2; Flags: Precursor gi|332659506|gb|AEE84906.1| phosphoglucan, water dikinase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297803668|ref|XP_002869718.1| ATGWD2/GWD3 [Arabidopsis lyrata subsp. lyrata] gi|297315554|gb|EFH45977.1| ATGWD2/GWD3 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|5051787|emb|CAB45080.1| putative protein [Arabidopsis thaliana] gi|7269295|emb|CAB79355.1| putative protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|168001040|ref|XP_001753223.1| predicted protein [Physcomitrella patens subsp. patens] gi|162695509|gb|EDQ81852.1| predicted protein [Physcomitrella patens subsp. patens] Back     alignment and taxonomy information
>gi|302765535|ref|XP_002966188.1| hypothetical protein SELMODRAFT_266998 [Selaginella moellendorffii] gi|300165608|gb|EFJ32215.1| hypothetical protein SELMODRAFT_266998 [Selaginella moellendorffii] Back     alignment and taxonomy information
>gi|302801007|ref|XP_002982260.1| hypothetical protein SELMODRAFT_233951 [Selaginella moellendorffii] gi|300149852|gb|EFJ16505.1| hypothetical protein SELMODRAFT_233951 [Selaginella moellendorffii] Back     alignment and taxonomy information
>gi|168025388|ref|XP_001765216.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683535|gb|EDQ69944.1| predicted protein [Physcomitrella patens subsp. patens] Back     alignment and taxonomy information
>gi|13124867|gb|AAK11735.1| starch associated protein R1 [Solanum tuberosum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1033
TAIR|locus:2136027 1278 PWD "phosphoglucan, water diki 0.973 0.787 0.586 0.0
TAIR|locus:2019953 1399 SEX1 "STARCH EXCESS 1" [Arabid 0.825 0.609 0.450 8.5e-221
TAIR|locus:2151089 1196 PWD "PHOSPHOGLUCAN WATER DIKIN 0.193 0.167 0.280 2.2e-15
TAIR|locus:2196759887 AMY3 "alpha-amylase-like 3" [A 0.112 0.130 0.285 1e-05
TAIR|locus:2136027 PWD "phosphoglucan, water dikinase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3092 (1093.5 bits), Expect = 0., P = 0.
 Identities = 606/1034 (58%), Positives = 761/1034 (73%)

Query:     1 MATSEDKQIPRVHNFELVEGMKLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGN 60
             MATS+ +Q      F+L+EGM+LQI  +G   G +VR +F L+NC R WILHWG +Y+GN
Sbjct:     1 MATSKSQQ------FQLIEGMELQITVTGLPNGSSVRAEFHLKNCTRAWILHWGCIYQGN 54

Query:    61 TNWFIPAEHP-KQGALQTPFVKSGEIYLVTIELRDPKIHAIEFILKDGIHDRWLRLNHGN 119
              +W+IP+EH  KQGALQT FVKSG+ Y+V +ELRDP++ AIEF+LKDG H+RWLR ++GN
Sbjct:    55 NHWYIPSEHSSKQGALQTTFVKSGDAYVVILELRDPRVRAIEFVLKDGSHNRWLRQHNGN 114

Query:   120 FRIEIPEIDTNTCLQPIPKDLIELRAYQNWERRGRPNNSPQQQQKDYNDALKELQLQLSN 179
             FR+EIP  D +   + IPK LIE RA++ W+R+GRP +S ++QQ DY++A++EL  +L+ 
Sbjct:   115 FRVEIPWNDLHAHHR-IPKTLIERRAHKIWDRKGRPQSSAREQQIDYDNAVRELHAELAR 173

Query:   180 GISLKDLQSSHMTASTKPVFKNK--EQIRYGVPSYPCRRHDVEKWLQKNYKGHVKTNTLP 237
             GISL +LQ++    ST PV K +  E     + SY  R+HDV+KWLQK  +   ++ ++ 
Sbjct:   174 GISLDELQAN----STVPVEKEETSEPHHTMIQSYR-RKHDVQKWLQKYTEPINRSGSVK 228

Query:   238 SSSFVALVENSLGADNVISRQSYHM-DHEIVVLSKIISSDYHILVAVNMKGAAILHWGIS 296
             SS+   L + S+G +N++S++S+H+ ++EI VL + +  D  + +A NM G  +LHWG++
Sbjct:   229 SSALAELSKRSVGQENLVSQKSFHVRNYEITVLQRDVKGDCRLWIATNMAGPTVLHWGVA 288

Query:   297 KCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIW 356
             K S GEWL PPPD+LPEKSK V GACQT FTD+++   S+Q +D+NL++  FVGIQFVIW
Sbjct:   289 KSSAGEWLIPPPDVLPEKSKFVHGACQTQFTDMSSREHSYQFIDINLKRGGFVGIQFVIW 348

Query:   357 SGGSWIKNNGENFFVGLHPMDPKDKNFVSKVDGDDK--VKWLLDEISCREKEAERSLMHR 414
             SGG W+ NNG NF V L   D        K+D D+K  +KWLLDEIS REKEAERSLMHR
Sbjct:   349 SGGYWVNNNGANFVVNLKSADSTS----GKLDVDEKYVLKWLLDEISEREKEAERSLMHR 404

Query:   415 FNIAAELTERCKGEGELGLIAIMVWMRFMACRHLTWNKNYNVKPREISEAQDRFTNLLQK 474
             FNIA ELTERCK EGE G I IMVWMRFMA RHLTWNKNYNVKPREISEA +RFTNL++K
Sbjct:   405 FNIATELTERCKDEGEGGCIGIMVWMRFMATRHLTWNKNYNVKPREISEALERFTNLMEK 464

Query:   475 IYSSQPNDREIVRLIMAFXXXXXXXXXXXXXXXEILVIQRNNGCKTGMMEEWHQKLHNNT 534
             IY  QPN REIVRL MA                EILVIQRNN CK+GMMEEWHQKLHNN+
Sbjct:   465 IYLQQPNKREIVRLTMALVGRGGQGDVGQRIRDEILVIQRNNHCKSGMMEEWHQKLHNNS 524

Query:   535 SPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLT 594
             S DD+IICEALLNY+R  F+IDAYWQTL  +GL+K++LASYDRPIVSEPRFR+D+KE L 
Sbjct:   525 SADDVIICEALLNYVRSDFRIDAYWQTLQTNGLTKERLASYDRPIVSEPRFRSDSKEGLI 584

Query:   595 RDLTMYLKTLKAVHSGADLESAIETCY---KGHNSVISDSFGSLSSKLRECLTFIKAHIH 651
             RDLTMYLKTLKAVHSGADLESAI+T     KGH+     +   LS KL++ L  +K  + 
Sbjct:   585 RDLTMYLKTLKAVHSGADLESAIDTFLSPSKGHHVF---AVNGLSPKLQDLLNLVKRLVR 641

Query:   652 DESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPP 711
             +E+   L+EKLVD+RI+LHP L   R RAKDLLFLDI+L S  KTT+E+ L  LNF++PP
Sbjct:   642 EENTEPLIEKLVDARIQLHPALRAPRTRAKDLLFLDIALESCFKTTIEKRLISLNFNNPP 701

Query:   712 EIMFFIXXXXXXXXXXVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLA 771
             EI++ I          +VNNE++I+CTKDWYRVSE+YR +D QWALQ KA+LDRLQLVLA
Sbjct:   702 EIIYVICVVLENLCLSIVNNEEIIFCTKDWYRVSEAYRPHDVQWALQTKAVLDRLQLVLA 761

Query:   772 ERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVAN 831
             +R Q Y    QP+ KYLG LL V+K+ ID FTEE++RA   AVLS L+NRF+P LRK+AN
Sbjct:   762 DRCQHYFTIIQPTAKYLGQLLRVDKHGIDVFTEEVIRAGPGAVLSTLVNRFDPSLRKIAN 821

Query:   832 LGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMP 891
             LGCWQVIS  +  GF+  VNELI +QNK Y +PT+IIAS++TGEEEIP GVVAVLTP M 
Sbjct:   822 LGCWQVISSADAYGFVVCVNELIVVQNKFYSKPTVIIASKVTGEEEIPAGVVAVLTPSMI 881

Query:   892 DVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKXXXXXXXXXXXXXXXXXX 951
             DVLSHVSIRARN+K+CFATCFDQN+L NL+ KEG+A+SI  K                  
Sbjct:   882 DVLSHVSIRARNSKICFATCFDQNVLSNLKSKEGRAISIHTKSTGLVISDGNNSDVSVRH 941

Query:   952 XXXXXXPRGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIP 1011
                   PRG+  K K F G Y +S ++FT + VG+KS NIKFLRERVPSWIKIPTS A+P
Sbjct:   942 IFISSVPRGVISKGKKFCGHYVISSKEFTDERVGSKSYNIKFLRERVPSWIKIPTSAALP 1001

Query:  1012 FGAFETVLSENINK 1025
             FG FE +LS++ NK
Sbjct:  1002 FGTFENILSDDSNK 1015
GO:0005524 "ATP binding" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016301 "kinase activity" evidence=IEA
GO:0016310 "phosphorylation" evidence=IEA
GO:0009941 "chloroplast envelope" evidence=IDA
TAIR|locus:2019953 SEX1 "STARCH EXCESS 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151089 PWD "PHOSPHOGLUCAN WATER DIKINASE" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196759 AMY3 "alpha-amylase-like 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9STV0GWD2_ARATH2, ., 7, ., 9, ., 40.61500.97380.7871yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.9.40.914
3rd Layer2.7.90.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
PWD
PWD (PHOSPHOGLUCAN, WATER DIKINASE); ATP binding / kinase; PHOSPHOGLUCAN, WATER DIKINASE (PWD); FUNCTIONS IN- kinase activity, ATP binding; INVOLVED IN- phosphorylation; LOCATED IN- chloroplast envelope; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 14 growth stages; CONTAINS InterPro DOMAIN/s- Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro-IPR002192); BEST Arabidopsis thaliana protein match is- SEX1 (STARCH EXCESS 1); alpha-glucan, water dikinase (TAIR-AT1G10760.1); Has 968 Blast hits to 950 proteins in 384 species- Archae - 116; Bacteria - 652; Metazoa - 0; Fungi [...] (1278 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
SEX4
SEX4 (STARCH-EXCESS 4); polysaccharide binding / protein tyrosine/serine/threonine phosphatase; [...] (379 aa)
      • 0.925
DPE1
DPE1 (DISPROPORTIONATING ENZYME); 4-alpha-glucanotransferase/ catalytic/ cation binding; Encode [...] (576 aa)
      • 0.921
ISA3
ISA3 (ISOAMYLASE 3); alpha-amylase/ isoamylase; Encodes an isoamylase-like protein. Mutant stud [...] (764 aa)
      • 0.919
RCP1
RCP1 (ROOT CAP 1); maltose transmembrane transporter; Encodes a maltose transporter that is exp [...] (415 aa)
      • 0.867
AT3G29320
glucan phosphorylase, putative; Encodes a plastidic alpha-glucan phosphorylase. In vitro, the e [...] (962 aa)
      • 0.829
PHS2
PHS2 (ALPHA-GLUCAN PHOSPHORYLASE 2); phosphorylase/ transferase, transferring glycosyl groups; [...] (841 aa)
      • 0.827
ATLDA
ATLDA (LIMIT DEXTRINASE); alpha-amylase/ limit dextrinase/ pullulanase; Encodes an enzyme thoug [...] (965 aa)
      • 0.823
BAM4
BAM4 (BETA-AMYLASE 4); beta-amylase/ catalytic/ cation binding; In vitro assay indicates no bet [...] (531 aa)
      • 0.819
ADG1
ADG1 (ADP GLUCOSE PYROPHOSPHORYLASE 1); glucose-1-phosphate adenylyltransferase; Encodes the sm [...] (520 aa)
      • 0.790
AMY1
AMY1 (ALPHA-AMYLASE-LIKE); alpha-amylase; Predicted to be secreted protein based on signalP pre [...] (423 aa)
      • 0.790

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1033
PLN02784894 PLN02784, PLN02784, alpha-amylase 2e-11
PLN02784894 PLN02784, PLN02784, alpha-amylase 9e-08
PLN02784894 PLN02784, PLN02784, alpha-amylase 0.002
>gnl|CDD|215419 PLN02784, PLN02784, alpha-amylase Back     alignment and domain information 
 Score = 67.7 bits (165), Expect = 2e-11
 Identities = 81/345 (23%), Positives = 121/345 (35%), Gaps = 81/345 (23%)

Query: 44  NCARTWILHWGFLYRGNT--NWFIPAEH--------PKQGALQTPFVKSGE---IYLVTI 90
           +    WILHWG  Y G+T   W  P E          K  A++TP  KS E    Y VTI
Sbjct: 113 SIPGKWILHWGVSYVGDTGSEWDQPPEEMRPPGSIAIKDYAIETPLKKSSEGDSFYEVTI 172

Query: 91  EL-RDPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNW 149
           +L  +  I AI F+LKD     W +    +F++            P+  DL         
Sbjct: 173 DLDPNSSIAAINFVLKDEETGAWYQHKGRDFKV------------PLVDDL--------- 211

Query: 150 ERRGRPNNSPQQQQKDYNDALKELQLQLSNGISLKDLQSSHMTASTKPVFKNKEQIRYGV 209
                P+       K           QLSN I LKD  S            +    R   
Sbjct: 212 -----PDGGNNVGAKKGFGIWPGALGQLSN-ILLKDEGSPSKEQDKSSSELDSAAER--- 262

Query: 210 PSYPCRRHDVEKWLQKNYKGHVKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVL 269
                      K L+  Y+       +        V+NS+                  V 
Sbjct: 263 -----------KGLKGFYEEMPIVKRVA-------VDNSVTV---------------TVR 289

Query: 270 SKIISSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDI 329
               ++   + +  ++ G  ++HWG+ K     W  PP    PE S     A QT     
Sbjct: 290 KCPETAKNLVYLETDLPGDVVVHWGVCKDGAKTWEIPPEPHPPETSLFKNKALQTMLQQK 349

Query: 330 ATARGSFQMVDVNLQKRKFVGIQFVI-WSGGSWIKNNGENFFVGL 373
               GS  +  ++    +  G+ FV+  + G+W++ NG +F+V L
Sbjct: 350 DDGNGSSGLFSLD---GELEGLLFVLKLNEGTWLRCNGNDFYVPL 391

Length = 894
>gnl|CDD|215419 PLN02784, PLN02784, alpha-amylase Back     alignment and domain information
>gnl|CDD|215419 PLN02784, PLN02784, alpha-amylase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1033
PLN02784894 alpha-amylase 100.0
PLN02784894 alpha-amylase 99.93
PLN023161036 synthase/transferase 97.01
PRK05849783 hypothetical protein; Provisional 96.76
PRK06241871 phosphoenolpyruvate synthase; Validated 96.72
PRK08296603 hypothetical protein; Provisional 96.5
PRK06464 795 phosphoenolpyruvate synthase; Validated 96.37
PLN023161036 synthase/transferase 95.81
PF0039180 PEP-utilizers: PEP-utilising enzyme, mobile domain 95.78
TIGR01418 782 PEP_synth phosphoenolpyruvate synthase. Also calle 95.63
PRK06241 871 phosphoenolpyruvate synthase; Validated 95.51
PF0342387 CBM_25: Carbohydrate binding domain (family 25); I 95.26
PRK05865854 hypothetical protein; Provisional 95.19
PRK09279 879 pyruvate phosphate dikinase; Provisional 94.95
PRK05878530 pyruvate phosphate dikinase; Provisional 94.78
TIGR01418 782 PEP_synth phosphoenolpyruvate synthase. Also calle 94.53
PRK06354590 pyruvate kinase; Provisional 94.42
TIGR01828 856 pyru_phos_dikin pyruvate, phosphate dikinase. This 94.4
PRK06464 795 phosphoenolpyruvate synthase; Validated 93.93
PF0342387 CBM_25: Carbohydrate binding domain (family 25); I 92.65
PRK11377473 dihydroxyacetone kinase subunit M; Provisional 91.85
COG3848111 Phosphohistidine swiveling domain [Signal transduc 90.32
PRK05878 530 pyruvate phosphate dikinase; Provisional 89.33
PRK11061 748 fused phosphoenolpyruvate-protein phosphotransfera 86.76
PRK11177 575 phosphoenolpyruvate-protein phosphotransferase; Pr 85.7
TIGR01828 856 pyru_phos_dikin pyruvate, phosphate dikinase. This 85.51
COG1080 574 PtsA Phosphoenolpyruvate-protein kinase (PTS syste 85.33
TIGR01417 565 PTS_I_fam phosphoenolpyruvate-protein phosphotrans 83.54
PF1115440 DUF2934: Protein of unknown function (DUF2934); In 83.14
>PLN02784 alpha-amylase Back     alignment and domain information 
Probab=100.00  E-value=1.4e-51  Score=491.53  Aligned_cols=293  Identities=25%  Similarity=0.474  Sum_probs=240.1

Q ss_pred             ceeeeecce----eEEEeecCCCCCceEEEEEEEeecCCceEEEeeeeecCC--CccccCCC--CC------CCcccccc
Q 001677           13 HNFELVEGM----KLQINASGSSIGRNVRVQFQLRNCARTWILHWGFLYRGN--TNWFIPAE--HP------KQGALQTP   78 (1033)
Q Consensus        13 ~~~~~~~~~----~~~~~~~~~~~g~~~~v~~~~~n~~~~liLHWGv~~~~~--~eW~~P~~--~P------k~~A~~Tp   78 (1033)
                      ..|.|....    ++-|-|. ..++.+.+|.+.+. .+++|+|||||++.++  +||.+||+  +|      |++|||||
T Consensus        80 k~F~v~~~e~ve~~~~v~l~-~~~~g~~kv~v~t~-~~~~~vLHWGVs~~~~~~~EW~~PP~~~~PpgS~~~~~~A~eT~  157 (894)
T PLN02784         80 ETFPVKRTEKVEGKIYVRLE-EKNEKNWKLSVGCS-IPGKWILHWGVSYVGDTGSEWDQPPEEMRPPGSIAIKDYAIETP  157 (894)
T ss_pred             eeeeecccceecceeEEEEE-ccCCCcEEEEEEec-CCCCeEEEEeEecCCCCCccccCCCcccCCCCcEEecCeEEecc
Confidence            367765554    2334444 56788999999866 7788999999999885  79999999  44      89999999


Q ss_pred             cccc--cc-ceEEEEEec-CCcceeEEEEEEeccccchhcccCCcccccCCCCCCCCCCCCCchhhHhhhhhhhcccCCC
Q 001677           79 FVKS--GE-IYLVTIELR-DPKIHAIEFILKDGIHDRWLRLNHGNFRIEIPEIDTNTCLQPIPKDLIELRAYQNWERRGR  154 (1033)
Q Consensus        79 f~~s--g~-~~~v~ie~~-d~~i~aI~Fvl~de~~~~W~k~~g~nf~v~L~~~~~~~~~~~ipedLv~~~ay~~We~~Gk  154 (1033)
                      |+++  |+ .+.|+|||+ ++++.||+||||+|++|+||++||+||+|+||+......+.     +...+.+-.|.+   
T Consensus       158 f~~~s~~~~~~~v~iel~l~~~~~ai~FVLk~~~~g~W~~~~G~DF~V~l~~~~~~~~~~-----~~~~~~~~~~~~---  229 (894)
T PLN02784        158 LKKSSEGDSFYEVTIDLDPNSSIAAINFVLKDEETGAWYQHKGRDFKVPLVDDLPDGGNN-----VGAKKGFGIWPG---  229 (894)
T ss_pred             ccccccCCcceeEEEEEeeCCceeeEEEEEEeCCCCchhhcCCccEEEecccccccccce-----eehhhhcCcCcC---
Confidence            9996  44 788888998 89999999999999999999999999999999976666552     222456667777   


Q ss_pred             CCCChhHhhHHHHHHHHHHHHHhhcCCChHHHHhhhcCCCCCCCCCChhhhhcCCCC--CCCccCcHHHHHhhhcc--Cc
Q 001677          155 PNNSPQQQQKDYNDALKELQLQLSNGISLKDLQSSHMTASTKPVFKNKEQIRYGVPS--YPCRRHDVEKWLQKNYK--GH  230 (1033)
Q Consensus       155 p~~~~e~~~~ey~~A~~~l~~el~~G~sl~~l~~~~~~~~t~~~~~~~dql~~~~~~--~~~~~~d~~~~l~k~~~--~~  230 (1033)
                                                 .|.+|...+.++++.   ++++|=.++++.  .+.+++     |++||+  ++
T Consensus       230 ---------------------------~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  274 (894)
T PLN02784        230 ---------------------------ALGQLSNILLKDEGS---PSKEQDKSSSELDSAAERKG-----LKGFYEEMPI  274 (894)
T ss_pred             ---------------------------ccccccchhccCCCC---CcccCCCccccccccccccc-----chhhhhccce
Confidence                                       888888888887755   344331122222  223333     888998  77


Q ss_pred             cccCCCCchhHHHHHHhhcCCCcceeeeeeecccEEEEEEEee--CCceEEEEEecCCCCeEEEeeeecCCCCcccCCCC
Q 001677          231 VKTNTLPSSSFVALVENSLGADNVISRQSYHMDHEIVVLSKII--SSDYHILVAVNMKGAAILHWGISKCSPGEWLSPPP  308 (1033)
Q Consensus       231 ~~~~~~p~~~~~~~~~~~~~~~~v~~~k~f~l~~el~V~v~~~--~gk~~V~v~td~~~~lVLHWGV~k~~~~eW~~PP~  308 (1033)
                      .|+  +.+++.                        +.|+|+++  ++|++|+|+||+|++|||||||||++++||++||+
T Consensus       275 ~k~--~~~~~~------------------------~~v~v~~~~~~~k~~v~v~td~~~~vvlHWgV~k~~~~eW~~Pp~  328 (894)
T PLN02784        275 VKR--VAVDNS------------------------VTVTVRKCPETAKNLVYLETDLPGDVVVHWGVCKDGAKTWEIPPE  328 (894)
T ss_pred             eeE--EEecce------------------------EEEEEecCCCCCceEEEEEcCCCCCEEEEeEeccCCCCcccCCCC
Confidence            776  444444                        48999884  89999999999999999999999998999999999


Q ss_pred             CCCCCccccccceeeeeeecccCCCceeeEEEEEccCCceeEEEEEEec-CCcccccCCcceEEecCCCCCC
Q 001677          309 DMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWS-GGSWIKNNGENFFVGLHPMDPK  379 (1033)
Q Consensus       309 ~~~P~gS~~~~~A~eT~f~~~~~~~~~~~~leI~l~~d~~~Gi~FVLk~-g~~W~kn~G~DF~Vpl~~~~~~  379 (1033)
                      +++|+||++++|||||||++.+++.++++.++|   ++.|.||+||||+ +|+||||+|+||||||+..++.
T Consensus       329 ~~~P~~sv~~~kA~eT~~~~~~~~~~~~~~~~l---d~~~~g~~FVLk~~~g~W~~~~G~DF~Ipl~~~~~~  397 (894)
T PLN02784        329 PHPPETSLFKNKALQTMLQQKDDGNGSSGLFSL---DGELEGLLFVLKLNEGTWLRCNGNDFYVPLLTSSSL  397 (894)
T ss_pred             CCCCCcceecccccccccccccCCCcceEEEec---CCCeeEEEEEEECCCCchhhcCCccEEEeCCchhcc
Confidence            999999999999999999999998888988777   7899999999999 7999999999999999987644

>PLN02784 alpha-amylase Back     alignment and domain information
>PLN02316 synthase/transferase Back     alignment and domain information
>PRK05849 hypothetical protein; Provisional Back     alignment and domain information
>PRK06241 phosphoenolpyruvate synthase; Validated Back     alignment and domain information
>PRK08296 hypothetical protein; Provisional Back     alignment and domain information
>PRK06464 phosphoenolpyruvate synthase; Validated Back     alignment and domain information
>PLN02316 synthase/transferase Back     alignment and domain information
>PF00391 PEP-utilizers: PEP-utilising enzyme, mobile domain; InterPro: IPR008279 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ] Back     alignment and domain information
>TIGR01418 PEP_synth phosphoenolpyruvate synthase Back     alignment and domain information
>PRK06241 phosphoenolpyruvate synthase; Validated Back     alignment and domain information
>PF03423 CBM_25: Carbohydrate binding domain (family 25); InterPro: IPR005085 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity Back     alignment and domain information
>PRK05865 hypothetical protein; Provisional Back     alignment and domain information
>PRK09279 pyruvate phosphate dikinase; Provisional Back     alignment and domain information
>PRK05878 pyruvate phosphate dikinase; Provisional Back     alignment and domain information
>TIGR01418 PEP_synth phosphoenolpyruvate synthase Back     alignment and domain information
>PRK06354 pyruvate kinase; Provisional Back     alignment and domain information
>TIGR01828 pyru_phos_dikin pyruvate, phosphate dikinase Back     alignment and domain information
>PRK06464 phosphoenolpyruvate synthase; Validated Back     alignment and domain information
>PF03423 CBM_25: Carbohydrate binding domain (family 25); InterPro: IPR005085 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity Back     alignment and domain information
>PRK11377 dihydroxyacetone kinase subunit M; Provisional Back     alignment and domain information
>COG3848 Phosphohistidine swiveling domain [Signal transduction mechanisms] Back     alignment and domain information
>PRK05878 pyruvate phosphate dikinase; Provisional Back     alignment and domain information
>PRK11061 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; Provisional Back     alignment and domain information
>PRK11177 phosphoenolpyruvate-protein phosphotransferase; Provisional Back     alignment and domain information
>TIGR01828 pyru_phos_dikin pyruvate, phosphate dikinase Back     alignment and domain information
>COG1080 PtsA Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01417 PTS_I_fam phosphoenolpyruvate-protein phosphotransferase Back     alignment and domain information
>PF11154 DUF2934: Protein of unknown function (DUF2934); InterPro: IPR021327 This bacterial family of proteins has no known function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1033
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-18
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 89.1 bits (220), Expect = 4e-18
 Identities = 97/697 (13%), Positives = 196/697 (28%), Gaps = 232/697 (33%)

Query: 161 QQQKDYNDALKELQLQLSNGISLKDLQSSHMTASTKPVFKNKE--QIRYGVP-------- 210
           + Q  Y D L   +        + +     +    K +   +E   I             
Sbjct: 13  EHQYQYKDILSVFEDAF-----VDNFDCKDVQDMPKSILSKEEIDHI-IMSKDAVSGTLR 66

Query: 211 ------SYPCRRHD--VEKWLQKNY-------KGHVKTNTLPSSSFVALVENSLGADNV- 254
                 S         VE+ L+ NY       K   +  ++ +  ++    + L  DN  
Sbjct: 67  LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR-DRLYNDNQV 125

Query: 255 -----ISRQSYHMDHEI-VVLSKIISSDYHILVAVN-MKGAAILHWGISKCSPGEWLSPP 307
                +SR       ++   L ++  +     V ++ + G+     G             
Sbjct: 126 FAKYNVSRL--QPYLKLRQALLELRPAKN---VLIDGVLGS-----G------------- 162

Query: 308 PDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSGGSWIK---- 363
                 K+ +    C                    +Q +    I F       W+     
Sbjct: 163 ------KTWVALDVCL----------------SYKVQCKMDFKI-F-------WLNLKNC 192

Query: 364 -------NNGENFFVGLHPMDPKDKNFVSKVDGDDKVKWLLDEISCREKEAERSLMHRFN 416
                     +     +      D N+ S+ D    +K  +  I    +   R L+    
Sbjct: 193 NSPETVLEMLQKLLYQI------DPNWTSRSDHSSNIKLRIHSI----QAELRRLLKS-- 240

Query: 417 IAAELTERCKGEGELGLIAIM--VWMR-----F-MACRHL--TWNKN-------YNVKPR 459
              +  E C       L+ ++  V        F ++C+ L  T  K              
Sbjct: 241 ---KPYENC-------LL-VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHI 289

Query: 460 EISEAQDRFT-----NLLQKIYSSQPND--REIVR---LIMAFVGRGGQGDVGQRIRDEI 509
            +       T     +LL K    +P D  RE++      ++ +           IRD +
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAE--------SIRDGL 341

Query: 510 LVIQ--RNNGCK--TGMME--------EWHQKLHNNTS--PDDIIICEALLNYIRCGFKI 555
                 ++  C   T ++E          ++K+ +  S  P    I   LL         
Sbjct: 342 ATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILL--------- 392

Query: 556 DAYWQTL--NCHGLSKQKLASY---DRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSG 610
              W  +  +   +   KL  Y   ++            KES     ++YL+    + + 
Sbjct: 393 SLIWFDVIKSDVMVVVNKLHKYSLVEK----------QPKESTISIPSIYLELKVKLENE 442

Query: 611 ADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHI--HDESINQ-----LMEKL- 662
             L  +I   Y    +  SD              +  +HI  H ++I       L   + 
Sbjct: 443 YALHRSIVDHYNIPKTFDSDDLIPPYLD-----QYFYSHIGHHLKNIEHPERMTLFRMVF 497

Query: 663 -----VDSRIELHPVLGTARGRAKDLLFLDISL----ASAIKTTMERGLKDL-NFSHPPE 712
                ++ +I        A G   + L   +              ER +  + +F    E
Sbjct: 498 LDFRFLEQKIRHDSTAWNASGSILNTL-QQLKFYKPYICDNDPKYERLVNAILDFLPKIE 556

Query: 713 IMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYR 749
                S   + L ++++  ++ I+         E+++
Sbjct: 557 ENLICSKYTDLLRIALMAEDEAIF--------EEAHK 585
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1033
d1zyma2124 N-terminal domain of enzyme I of the PEP:sugar pho 97.27
d1kbla3375 Pyruvate phosphate dikinase, N-terminal domain {Cl 96.18
d1vbga3380 Pyruvate phosphate dikinase, N-terminal domain {Ma 96.01
d1h6za3405 Pyruvate phosphate dikinase, N-terminal domain {Tr 95.85
d1h6za2132 Pyruvate phosphate dikinase, central domain {Trypa 95.83
d1vbga2135 Pyruvate phosphate dikinase, central domain {Maize 95.79
d1kbla2133 Pyruvate phosphate dikinase, central domain {Clost 94.53
d2hi6a1132 Hypothetical protein AF0055 {Archaeoglobus fulgidu 92.94
>d1zyma2 c.8.1.2 (A:3-21,A:145-249) N-terminal domain of enzyme I of the PEP:sugar phosphotransferase system {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: The "swivelling" beta/beta/alpha domain
superfamily: Phosphohistidine domain
family: N-terminal domain of enzyme I of the PEP:sugar phosphotransferase system
domain: N-terminal domain of enzyme I of the PEP:sugar phosphotransferase system
species: Escherichia coli [TaxId: 562]

Probab=97.27  E-value=0.00033  Score=45.62  Aligned_cols=98  Identities=19%  Similarity=0.181  Sum_probs=69.8

Q ss_pred             EEECCEEEEEEEEECCC-CCCCCCCCCCCEEEEEECCCCCCCCC----CCCEEEECCCCCCCCHHHHHHCCCCCCEEEEE
Q ss_conf             53110378999993231-12233346899699992788766569----89279986999996403444203587307995
Q 001677          837 VISPVEVCGFITSVNEL-ITLQNKVYRRPTIIIASRITGEEEIP----VGVVAVLTPDMPDVLSHVSIRARNNKVCFATC  911 (1033)
Q Consensus       837 vIspG~A~G~Lv~V~~L-~~vq~~~~~~P~Illv~~~~GdEEIp----~~VvGVit~~~pd~LSHvaVRARn~gVpfAtc  911 (1033)
                      ..+||.+.|+++++..- .+..  .+.++.||++...+- .+++    ..+.||+|..-. ..||.++.||.+|||-+..
T Consensus         4 ~as~G~~~G~v~~~~~~~~~~~--~~~~~~ILV~~~l~P-~~~~~l~~~~v~Giit~~Gg-~tSH~AIlAR~lgIP~vvg   79 (124)
T d1zyma2           4 LASPGIAFGKALLLKEKIIDLS--AIQDEVILVAADLTP-SETAQLNLKKVLGFITDAGG-RTSHTSIMARSLELPAIVG   79 (124)
T ss_dssp             CSBCCCEEEEEEECCCCCCCGG--GCCSCEEEECSCCCH-HHHHHSCGGGEEEEECSCCC-SSSHHHHHHHHHTCCEECC
T ss_pred             CCCCEEEEEEEEEECCCHHHHH--HCCCCEEEEECCCCH-HHHHHHCHHHEEEEEEECCC-CCCHHHHHHHHCCCCEEEE
T ss_conf             8778189999999788588898--589987999746877-88743172242799983698-6647899999749987997


Q ss_pred             ECHHHHHHHHHCCCCEEEEEECCCCEEEEE
Q ss_conf             153888898850698099998378359842
Q 001677          912 FDQNILRNLRLKEGKAVSIRLKSTNLIISD  941 (1033)
Q Consensus       912 ~D~~~l~~lr~~~Gk~V~l~vss~~V~l~~  941 (1033)
                      -... ...  -.+|+.|.+......|.+..
T Consensus        80 ~~~~-~~~--i~~g~~v~vDg~~G~v~~~P  106 (124)
T d1zyma2          80 TGSV-TSQ--VKNDDYLILDAVNNQVYVNP  106 (124)
T ss_dssp             CSCH-HHH--CCTTCEEEECCSSCCEEESC
T ss_pred             CCCH-HHH--HCCCCEEEEECCCCEEEECC
T ss_conf             0217-887--11798899989989899899
>d1kbla3 d.142.1.5 (A:2-376) Pyruvate phosphate dikinase, N-terminal domain {Clostridium symbiosum [TaxId: 1512]} Back     information, alignment and structure
>d1vbga3 d.142.1.5 (A:3-382) Pyruvate phosphate dikinase, N-terminal domain {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1h6za3 d.142.1.5 (A:1-405) Pyruvate phosphate dikinase, N-terminal domain {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1h6za2 c.8.1.1 (A:406-537) Pyruvate phosphate dikinase, central domain {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1vbga2 c.8.1.1 (A:383-517) Pyruvate phosphate dikinase, central domain {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1kbla2 c.8.1.1 (A:377-509) Pyruvate phosphate dikinase, central domain {Clostridium symbiosum [TaxId: 1512]} Back     information, alignment and structure
>d2hi6a1 c.8.2.3 (A:1-132) Hypothetical protein AF0055 {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure