Citrus Sinensis ID: 001722

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020

MFVGASPDARLVSPLSTPRSNGYAASPWDHISPSPVPIRASGSSVKSSSSGYSRRSHQLTFSRESSQSFEDGVADETYSEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFDTDSSSFILGDDASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQITADNHQWEERQLLRSGAVRGTELSTEFDDEEEHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMENLRKIQADEERENKAKEREKRVKERQQVSMPGWRQGSTTYLRPKKFGL

ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccHHHHHHHHHHcccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHcccccccccccccccccHccHHHHHHHccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHccEEEEEccccccccccccHHHHHcccccccEEECcccHHHHHHHHHHHHHHHHcccccccccEEEEccccccccccEEEccHHHHHHHHccccccccccEEEEEccccccHHHHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHcccccEEEEccccccccEEEcccccHHHHHHHHHHHHHHHcccccccEEEEcccHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccccccHHHHHHHcccccccccEEEEEEcHHHHccccccEEEEEcccccccccccccccccEEEEEEccHHHHccccccccccccccEEEcccHHHHHHHccccccccccccccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHcccccccccHHHHHccccccHHHHHHHHHHHcccccccccccHHHHHHHHHcccccccccHHHHHHHHHHHHHccccccHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHccccccEEEcccccEEEEccccccccccccccEEEEEHHHcccccccHHcccccccHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccc

************************************************************************************************NSDRAWYDREEG***********************************************************QLLRSGAVRGTELSTEFDDEEEHKVILLVHDTKPPFLDGRIVFTKQAE****IKDPTSDMAIISR***********************************************************************************AEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAA*********RTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFR*************KFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSV*********************************************************************KKF**

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MFVGASPDARLVSPLSTPRSNGYAASPWDHISPSPVPIRASGSSVKSSSSGYSRRSHQLTFSRESSQSFEDGVADETYSEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFDTDSSSFILGDDASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQITADNHQWEERQLLRSGAVRGTELSTEFDDEEEHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQVVVVVGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVSMPGWRQGSTTYLRPKKFGL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1	Probable ATP-binding RNA helicase involved in pre-mRNA splicing.	probable	P34498
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16	Influences the fidelity of branchpoint recognition in yeast splicing. This is RNA-dependent ATPase which is essential for viability. It may mediate one of the many ATP-requiring steps of spliceosome assembly and that accuracy of branchpoint recognition may be coupled to ATP binding and/or hydrolysis.	probable	P15938
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16	Probable ATP-binding RNA helicase involved in pre-mRNA splicing.	probable	Q92620

Prediction of Enzyme Commission Number

EC Number	Description	Confidence Level
3.-.-.-	Hydrolases.	probable
3.6.-.-	Acting on acid anhydrides.	probable
3.6.4.-	Acting on acid anhydrides; involved in cellular and subcellular movement.	probable
3.6.4.13	RNA helicase.	probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3I4U, chain A
Confidence level:very confident
Coverage over the Query: 710-957
View the alignment between query and template
View the model in PyMOL

Template: 2XAU, chain A
Confidence level:very confident
Coverage over the Query: 212-263,274-298,311-967
View the alignment between query and template
View the model in PyMOL