Citrus Sinensis ID: 001888
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1000 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LK90 | 1189 | Putative phospholipid-tra | yes | no | 0.986 | 0.829 | 0.762 | 0.0 | |
| Q9SX33 | 1200 | Putative phospholipid-tra | no | no | 0.962 | 0.801 | 0.684 | 0.0 | |
| Q9LI83 | 1202 | Phospholipid-transporting | no | no | 0.962 | 0.800 | 0.675 | 0.0 | |
| P57792 | 1184 | Putative phospholipid-tra | no | no | 0.954 | 0.805 | 0.665 | 0.0 | |
| Q9SAF5 | 1203 | Putative phospholipid-tra | no | no | 0.962 | 0.799 | 0.657 | 0.0 | |
| Q9LNQ4 | 1216 | Putative phospholipid-tra | no | no | 0.985 | 0.810 | 0.568 | 0.0 | |
| Q9SGG3 | 1228 | Putative phospholipid-tra | no | no | 0.987 | 0.803 | 0.555 | 0.0 | |
| Q9LVK9 | 1243 | Putative phospholipid-tra | no | no | 0.976 | 0.785 | 0.540 | 0.0 | |
| Q9SLK6 | 1240 | Phospholipid-transporting | no | no | 0.986 | 0.795 | 0.541 | 0.0 | |
| Q9XIE6 | 1213 | Phospholipid-transporting | no | no | 0.958 | 0.789 | 0.449 | 0.0 |
| >sp|Q9LK90|ALA8_ARATH Putative phospholipid-transporting ATPase 8 OS=Arabidopsis thaliana GN=ALA8 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 1615 bits (4181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 769/1008 (76%), Positives = 883/1008 (87%), Gaps = 22/1008 (2%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
MNLDGETNLKLK +LE T+ DEES + F +IKCEDPNE LYSFVGTL +EGKQYPLS
Sbjct: 192 MNLDGETNLKLKHALEITS---DEESIKNFRGMIKCEDPNEHLYSFVGTLYFEGKQYPLS 248
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLI 120
PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIE+KMD+I+Y+LFS LI
Sbjct: 249 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIEKKMDQIIYILFSILI 308
Query: 121 LISSTGSVFFGIETKRDI-DGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGY 179
+I+ TGSVFFGI T+RD+ D GK+RRWYL+PD TVFYDPRRA AAF HFLT LMLYGY
Sbjct: 309 VIAFTGSVFFGIATRRDMSDNGKLRRWYLRPDHTTVFYDPRRAVAAAFFHFLTALMLYGY 368
Query: 180 LIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGT 239
LIPISLY+SIE+VKVLQS+FIN D++MY+E+TD+PARARTSNLNEELGQVDTILSDKTGT
Sbjct: 369 LIPISLYVSIEVVKVLQSIFINQDQEMYHEETDRPARARTSNLNEELGQVDTILSDKTGT 428
Query: 240 LTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFE-VDDSQTDAPGLNGNIVESGK 298
LTCNSMEFVKCS+AG AYGR MTEVE L K+KG T E V D+++ + ++ K
Sbjct: 429 LTCNSMEFVKCSIAGTAYGRGMTEVEVALRKQKGLMTQEEVGDNESLS-------IKEQK 481
Query: 299 SVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEA 358
+VKGFNF DERI++GQW+N+P++++IQKFFRVLAICHTAIPDVN +TGEI+YEAESPDEA
Sbjct: 482 AVKGFNFWDERIVDGQWINQPNAELIQKFFRVLAICHTAIPDVNSDTGEITYEAESPDEA 541
Query: 359 AFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNP 418
AFVIA+RE+GF+FF SQTSISLHE+D ++G+KV+RVYELLHVLEF+SSRKRMSV+VRNP
Sbjct: 542 AFVIASRELGFEFFSRSQTSISLHEIDHMTGEKVDRVYELLHVLEFSSSRKRMSVIVRNP 601
Query: 419 ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIW 478
EN+LLLL KGADSVMF+RL+KHG+Q E ET+ HI +YAEAGLRTLVI YRE+ EDEY +W
Sbjct: 602 ENRLLLLSKGADSVMFKRLAKHGRQNERETKEHIKKYAEAGLRTLVITYREIDEDEYIVW 661
Query: 479 EKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKV 538
E+EFL AKT VT DR+AL+ +AA+KIE+DLILLG+TAVEDKLQKGVP+CI+KL+QAG+K+
Sbjct: 662 EEEFLNAKTLVTEDRDALIDAAADKIEKDLILLGSTAVEDKLQKGVPDCIEKLSQAGVKI 721
Query: 539 WVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598
WVLTGDK ETAINIGYACSLLR+ MKQI++TLDS D+EALEKQGDKE + K S +S+ KQ
Sbjct: 722 WVLTGDKTETAINIGYACSLLREGMKQILVTLDSSDIEALEKQGDKEAVAKASFQSIKKQ 781
Query: 599 IREGISQV-----NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSS 653
+REG+SQ NSAKE+ FGLVIDGKSL +ALD KLEK FL+LAI C SVICCRSS
Sbjct: 782 LREGMSQTAAVTDNSAKENSEMFGLVIDGKSLTYALDSKLEKEFLELAIRCNSVICCRSS 841
Query: 654 PKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 712
PKQKALVTRLVK GTG+TTLAIGDGANDVGMLQEADIGVGISG EGMQAVM+SD+AIAQF
Sbjct: 842 PKQKALVTRLVKNGTGRTTLAIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAIAQF 901
Query: 713 RFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYN 772
RFLERLLLVHGHWCYRRI++MICYFFYKNL FGFTLFWYEAYASFSG+PAYNDWYMSCYN
Sbjct: 902 RFLERLLLVHGHWCYRRITLMICYFFYKNLAFGFTLFWYEAYASFSGKPAYNDWYMSCYN 961
Query: 773 VFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFF 832
VFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQN+LFSW RILGWM NGV+S++IIFF
Sbjct: 962 VFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNVLFSWERILGWMLNGVISSMIIFF 1021
Query: 833 FTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIAL 892
T N++ QAFRKDG VDY VLGV MYSSVVW VNCQMA+SINYFTWIQH FIWGSI +
Sbjct: 1022 LTINTMATQAFRKDGQVVDYSVLGVTMYSSVVWTVNCQMAISINYFTWIQHCFIWGSIGV 1081
Query: 893 WYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRP 952
WY+FLV+YGSLPPTFSTTA++V VE APS +YWL LVV S LLPYF YRAFQ +FRP
Sbjct: 1082 WYLFLVIYGSLPPTFSTTAFQVFVETSAPSPIYWLVLFLVVFSALLPYFTYRAFQIKFRP 1141
Query: 953 MYHDLI-QRQRLEGSETEISSQTEVSSELPAQVEIKMQHLKANLRQRN 999
MYHD+I +++R E +ET + V ELP QVE + HL+ANL +R+
Sbjct: 1142 MYHDIIVEQRRTERTET---APNAVLGELPVQVEFTLHHLRANLSRRD 1186
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 1 |
| >sp|Q9SX33|ALA9_ARATH Putative phospholipid-transporting ATPase 9 OS=Arabidopsis thaliana GN=ALA9 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1409 bits (3648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 662/967 (68%), Positives = 801/967 (82%), Gaps = 5/967 (0%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
MNLDGETNLK+K+ LE T+ LRDE +F+ F A +KCEDPN LYSFVGT++ +G +YPLS
Sbjct: 196 MNLDGETNLKVKQGLEVTSSLRDEFNFKGFEAFVKCEDPNANLYSFVGTMELKGAKYPLS 255
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLI 120
PQQ+LLRDSKL+NTD+++G V+FTGHDTKV+QN+TDPPSKRS IE+KMDKI+YL+F +I
Sbjct: 256 PQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSMIEKKMDKIIYLMFFMVI 315
Query: 121 LISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 180
++ GSV FG+ T+ D+ G ++RWYL+PD +++F+DP+RAP+AA HFLT +MLY Y
Sbjct: 316 TMAFIGSVIFGVTTRDDLKDGVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLTAVMLYSYF 375
Query: 181 IPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTL 240
IPISLY+SIEIVKVLQS+FIN D MYYE+ DKPARARTSNLNEELGQVDTILSDKTGTL
Sbjct: 376 IPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTGTL 435
Query: 241 TCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKG-ERTFEVDDSQTDAPGLNGNIVESGKS 299
TCNSMEF+KCSVAG AYGR +TEVE + +RKG F+ D++ D I E +
Sbjct: 436 TCNSMEFIKCSVAGTAYGRGVTEVEMAMGRRKGGPLVFQSDENDIDMEYSKEAITEES-T 494
Query: 300 VKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAA 359
VKGFNFRDERIMNG WV E H+DVIQKFFR+LA+CHT IP+V+E+T +ISYEAESPDEAA
Sbjct: 495 VKGFNFRDERIMNGNWVTETHADVIQKFFRLLAVCHTVIPEVDEDTEKISYEAESPDEAA 554
Query: 360 FVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPE 419
FVIAARE+GF+FF +QT+IS+ ELD VSG++V R+Y++L+VLEF S+RKRMSV+V+ +
Sbjct: 555 FVIAARELGFEFFNRTQTTISVRELDLVSGKRVERLYKVLNVLEFNSTRKRMSVIVQEED 614
Query: 420 NQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWE 479
+LLLLCKGAD+VMFERLSK+G++FE ETR H+N YA+AGLRTL++AYREL E EY+++
Sbjct: 615 GKLLLLCKGADNVMFERLSKNGREFEEETRDHVNEYADAGLRTLILAYRELDEKEYKVFN 674
Query: 480 KEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVW 539
+ +AK+SV++DRE+L+ EKIE+DLILLGATAVEDKLQ GVP+CIDKLAQAGIK+W
Sbjct: 675 ERISEAKSSVSADRESLIEEVTEKIEKDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIW 734
Query: 540 VLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQI 599
VLTGDKMETAINIG+ACSLLRQ+MKQI+I L++P++++LEK G+K+ I K S E+V QI
Sbjct: 735 VLTGDKMETAINIGFACSLLRQDMKQIIINLETPEIQSLEKTGEKDVIAKASKENVLSQI 794
Query: 600 REGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKAL 659
G +Q+ + + F L+IDGKSL +ALD ++ +FL+LA+ CASVICCRSSPKQKAL
Sbjct: 795 INGKTQLKYSGGN--AFALIIDGKSLAYALDDDIKHIFLELAVSCASVICCRSSPKQKAL 852
Query: 660 VTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERL 718
VTRLVK G GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD AIAQFR+LERL
Sbjct: 853 VTRLVKSGNGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERL 912
Query: 719 LLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSL 778
LLVHGHWCYRRIS MICYFFYKN+TFGFTLF YE Y +FS PAYNDW++S YNVFF+SL
Sbjct: 913 LLVHGHWCYRRISTMICYFFYKNITFGFTLFLYETYTTFSSTPAYNDWFLSLYNVFFSSL 972
Query: 779 PVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSI 838
PVIALGVFDQDVSAR CLK+PLLYQEGVQN+LFSW RILGWM NG SA+IIFF +S+
Sbjct: 973 PVIALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILGWMFNGFYSAVIIFFLCKSSL 1032
Query: 839 FNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYIFLV 898
+QAF DG E+LG MY+ +VW VN QMAL+I+YFT IQH IW SI +WY F+
Sbjct: 1033 QSQAFNHDGKTPGREILGGTMYTCIVWVVNLQMALAISYFTLIQHIVIWSSIVVWYFFIT 1092
Query: 899 VYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMYHDLI 958
VYG LP ST AYKV VEA APS+ YWL TL VVV+TL+PYF+Y A Q F PMYH +I
Sbjct: 1093 VYGELPSRISTGAYKVFVEALAPSLSYWLITLFVVVATLMPYFIYSALQMSFFPMYHGMI 1152
Query: 959 QRQRLEG 965
Q R EG
Sbjct: 1153 QWLRYEG 1159
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LI83|ALA10_ARATH Phospholipid-transporting ATPase 10 OS=Arabidopsis thaliana GN=ALA10 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1388 bits (3593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 657/972 (67%), Positives = 792/972 (81%), Gaps = 10/972 (1%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEES-FQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPL 59
MNLDGETNLK+K+ LEAT+ L +++S F+ F V++CEDPN LY FVGTL E +++PL
Sbjct: 194 MNLDGETNLKVKQGLEATSSLLNQDSDFKDFRGVVRCEDPNVNLYVFVGTLALEEERFPL 253
Query: 60 SPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTL 119
S QQILLRDSKL+NT+YVYG VVFTGHDTKV+QN+TDPPSKRS+IER MDKI+YL+F +
Sbjct: 254 SIQQILLRDSKLRNTEYVYGAVVFTGHDTKVIQNSTDPPSKRSRIERTMDKIIYLMFGLV 313
Query: 120 ILISSTGSVFFGIETKRD-IDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYG 178
L+S GS+ FG+ET+ D + G+ RWYL+PDDA +F+DP RAP+AA HF T MLY
Sbjct: 314 FLMSFVGSIIFGVETREDKVKNGRTERWYLKPDDADIFFDPERAPMAAIYHFFTATMLYS 373
Query: 179 YLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTG 238
Y IPISLY+SIEIVKVLQS+FIN D MYYE+TDKPA+ARTSNLNEELG VDTILSDKTG
Sbjct: 374 YFIPISLYVSIEIVKVLQSIFINRDIHMYYEETDKPAQARTSNLNEELGMVDTILSDKTG 433
Query: 239 TLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGK 298
TLTCNSMEF+KCS+AG AYGR +TEVER +A R G +D L+ + +SG
Sbjct: 434 TLTCNSMEFIKCSIAGKAYGRGITEVERAMAVRSGGSPLVNED-------LDVVVDQSGP 486
Query: 299 SVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEA 358
VKGFNF DER+MNG WV +P + V+QKFFR+LA+CHTAIP+ +EE+G +SYEAESPDEA
Sbjct: 487 KVKGFNFEDERVMNGNWVRQPEAAVLQKFFRLLAVCHTAIPETDEESGNVSYEAESPDEA 546
Query: 359 AFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNP 418
AFV+AARE GF+FF +Q IS ELD VSG+KV RVY LL+VLEF S+RKRMSV+VR+
Sbjct: 547 AFVVAAREFGFEFFNRTQNGISFRELDLVSGEKVERVYRLLNVLEFNSTRKRMSVIVRDD 606
Query: 419 ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIW 478
+ +LLLL KGAD+VMFERL+K+G+QFEA+T+ H+N+YA+AGLRTLV+AYRE+ E+EY +
Sbjct: 607 DGKLLLLSKGADNVMFERLAKNGRQFEAKTQEHVNQYADAGLRTLVLAYREVDENEYIEF 666
Query: 479 EKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKV 538
K F +AK SV+ DREAL+ +K+ERDLILLGATAVEDKLQ GVPECIDKLAQAGIK+
Sbjct: 667 NKSFNEAKASVSEDREALIDEITDKMERDLILLGATAVEDKLQNGVPECIDKLAQAGIKI 726
Query: 539 WVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598
WVLTGDKMETAINIG+A SLLRQEMKQI+I L++P +++LEK G K+ I S ESV Q
Sbjct: 727 WVLTGDKMETAINIGFASSLLRQEMKQIIINLETPQIKSLEKSGGKDEIELASRESVVMQ 786
Query: 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKA 658
++EG + + ++ S F L+IDGKSL +AL+ +++KMFLDLA CASVICCRSSPKQKA
Sbjct: 787 LQEGKALLAASGASSEAFALIIDGKSLTYALEDEIKKMFLDLATSCASVICCRSSPKQKA 846
Query: 659 LVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLER 717
LVTRLVK GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD AIAQFR+LER
Sbjct: 847 LVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLER 906
Query: 718 LLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTS 777
LLLVHGHWCY RI+ MICYFFYKN+TFG T+F YEAY SFSG+PAYNDW++S +NVFF+S
Sbjct: 907 LLLVHGHWCYSRIASMICYFFYKNITFGVTVFLYEAYTSFSGQPAYNDWFLSLFNVFFSS 966
Query: 778 LPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNS 837
LPVIALGVFDQDVSAR C K+PLLYQEGVQNILFSW RI+GWM NG +SA+ IFF S
Sbjct: 967 LPVIALGVFDQDVSARFCYKFPLLYQEGVQNILFSWKRIIGWMFNGFISALAIFFLCKES 1026
Query: 838 IFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYIFL 897
+ +Q F DG E+LG MY+ VVW VN QMALSI+YFTW+QH IWGSIA WYIFL
Sbjct: 1027 LKHQLFDPDGKTAGREILGGTMYTCVVWVVNLQMALSISYFTWVQHIVIWGSIAFWYIFL 1086
Query: 898 VVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMYHDL 957
++YG++ P+FST AY V +EA AP+ YWLTTL V++ L+PYF+Y++ Q RF P YH +
Sbjct: 1087 MIYGAMTPSFSTDAYMVFLEALAPAPSYWLTTLFVMIFALIPYFVYKSVQMRFFPKYHQM 1146
Query: 958 IQRQRLEGSETE 969
IQ R EG +
Sbjct: 1147 IQWIRYEGHSND 1158
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P57792|ALA12_ARATH Putative phospholipid-transporting ATPase 12 OS=Arabidopsis thaliana GN=ALA12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1362 bits (3525), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 645/969 (66%), Positives = 791/969 (81%), Gaps = 15/969 (1%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
MNLDGETNLKLK+ LE T LR+E +F+ F A IKCEDPN LYSFVGT+ +G++YPLS
Sbjct: 196 MNLDGETNLKLKQGLEVTLSLREELNFRDFEAFIKCEDPNANLYSFVGTMDLKGEKYPLS 255
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLI 120
PQQ+LLR SKL+NTDY+YGVV+FTG DTKV+QN+TDPPSKRS IERKMDKI+YL+F +
Sbjct: 256 PQQLLLRGSKLRNTDYIYGVVIFTGPDTKVVQNSTDPPSKRSMIERKMDKIIYLMFLMVF 315
Query: 121 LISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 180
++ GSV FGI T+ D G + RWYL+PDD+++F+DP+RAP+AA HFLT LML Y
Sbjct: 316 SLAFFGSVLFGIWTRDDFQNGVMERWYLKPDDSSIFFDPKRAPMAAIYHFLTALMLNSYF 375
Query: 181 IPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTL 240
IPISLY+SIEIVKVLQS+FIN D MYYE+ DKPA ARTSNLNEELGQV TILSDKTGTL
Sbjct: 376 IPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVGTILSDKTGTL 435
Query: 241 TCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESG--- 297
TCNSMEF+KCS+AG AYGR +TEVE + KRKG V+ S NGN E
Sbjct: 436 TCNSMEFIKCSIAGTAYGRGVTEVEMAMDKRKGSAL--VNQS-------NGNSTEDAVAA 486
Query: 298 -KSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPD 356
+VKGFNFRDERIM+G WV E H+DVIQKFF++LA+CHT IP+V+E+TG+ISYEAESPD
Sbjct: 487 EPAVKGFNFRDERIMDGNWVTETHADVIQKFFQLLAVCHTVIPEVDEDTGKISYEAESPD 546
Query: 357 EAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVR 416
EAAFVIAARE+GF+FF +QT+IS+ ELD V+G++V R+Y +L+VLEF+SS+KRMSV+V+
Sbjct: 547 EAAFVIAARELGFEFFTRTQTTISVRELDLVTGERVERLYSVLNVLEFSSSKKRMSVIVQ 606
Query: 417 NPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYR 476
+ + +LLLLCKGADSVMFERLS+ G+++E ETR H+N YA+AGLRTL++AYREL E+EY
Sbjct: 607 DQDGKLLLLCKGADSVMFERLSESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYE 666
Query: 477 IWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGI 536
++ + +AK SV++DREAL+ EKIE++L+LLGATAVEDKLQ GVP+CI+KLAQAGI
Sbjct: 667 VFTERISEAKNSVSADREALIDEVTEKIEKNLVLLGATAVEDKLQNGVPDCINKLAQAGI 726
Query: 537 KVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 596
K+WVLTGDKMETAINIG+ACSLLR++MKQI+I L++P+++ LEK G+K+ I + E+V
Sbjct: 727 KIWVLTGDKMETAINIGFACSLLRRDMKQIIINLETPEIQQLEKSGEKDAIAALK-ENVL 785
Query: 597 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQ 656
QI G +Q+ ++ + F L+IDGKSL +AL++ ++ +FL+LAI CASVICCRSSPKQ
Sbjct: 786 HQITSGKAQLKASGGNAKAFALIIDGKSLAYALEEDMKGIFLELAIGCASVICCRSSPKQ 845
Query: 657 KALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFL 715
KALVTRLVK G+G+TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD AIAQFR+L
Sbjct: 846 KALVTRLVKTGSGQTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYL 905
Query: 716 ERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFF 775
ERLLLVHGHWCYRRIS MICYFFYKN+TFGFTLF YEAY SFS PAYNDWY+S Y+VFF
Sbjct: 906 ERLLLVHGHWCYRRISKMICYFFYKNITFGFTLFLYEAYTSFSATPAYNDWYLSLYSVFF 965
Query: 776 TSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTT 835
TSLPVI LG+FDQDVSA CLK+P+LYQEGVQN+LFSW RIL WM +G SAIIIFF
Sbjct: 966 TSLPVICLGIFDQDVSAPFCLKFPVLYQEGVQNLLFSWRRILSWMFHGFCSAIIIFFLCK 1025
Query: 836 NSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYI 895
S+ +QAF +G ++LG MY+ VVW V+ QM L+I+YFT IQH +WGS+ +WY+
Sbjct: 1026 TSLESQAFNHEGKTAGRDILGGTMYTCVVWVVSLQMVLTISYFTLIQHVVVWGSVVIWYL 1085
Query: 896 FLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMYH 955
FL+VYGSLP ST AY V +EA AP+ YW+TTL VV+ST++PYF++ A Q RF PM H
Sbjct: 1086 FLMVYGSLPIRMSTDAYMVFLEALAPAPSYWITTLFVVLSTMMPYFIFSAIQMRFFPMSH 1145
Query: 956 DLIQRQRLE 964
+Q R E
Sbjct: 1146 GTVQLLRYE 1154
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SAF5|ALA11_ARATH Putative phospholipid-transporting ATPase 11 OS=Arabidopsis thaliana GN=ALA11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1351 bits (3497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 641/975 (65%), Positives = 785/975 (80%), Gaps = 13/975 (1%)
Query: 1 MNLDGETNLKLKRSLEATNH-LRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPL 59
MNLDGETNLK+K+ LEAT+ L ++ F++ AV+KCEDPN LY+FVGTL +E ++ PL
Sbjct: 192 MNLDGETNLKVKQGLEATSSALHEDSDFKELKAVVKCEDPNADLYTFVGTLHFEEQRLPL 251
Query: 60 SPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTL 119
S Q+LLRDSKL+NT+Y+YGVVVFTGHDTKV+QN+TDPPSKRS+IERKMDKI+YL+F +
Sbjct: 252 SITQLLLRDSKLRNTEYIYGVVVFTGHDTKVIQNSTDPPSKRSRIERKMDKIIYLMFGVV 311
Query: 120 ILISSTGSVFFGIETKRDI--DGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLY 177
L+S GS+ FGIET+ D +GG+ RWYL+PD+A +F+DP RAP+AA HF T +MLY
Sbjct: 312 FLMSFIGSIVFGIETREDRVRNGGRTERWYLRPDNADIFFDPDRAPMAAVYHFFTAVMLY 371
Query: 178 GYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKT 237
Y IPISLY+SIEIVKVLQS+FIN+D MYYE+ DKPA ARTSNLNEELG VDTILSDKT
Sbjct: 372 SYFIPISLYVSIEIVKVLQSLFINNDILMYYEENDKPAHARTSNLNEELGMVDTILSDKT 431
Query: 238 GTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESG 297
GTLTCNSMEF+KCS+AG AYGR +TEVER++A R + S L+ + +SG
Sbjct: 432 GTLTCNSMEFIKCSIAGTAYGRGITEVERSMAMRS-------NGSSLVGDDLDVVVDQSG 484
Query: 298 KSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDE 357
+KGFNF DER+M G WV + + V+QKFFR+LA+CHTAIP+ +E TG +SYEAESPDE
Sbjct: 485 PKIKGFNFLDERVMKGNWVKQRDAAVLQKFFRLLAVCHTAIPETDEATGSVSYEAESPDE 544
Query: 358 AAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRN 417
AAFV+AARE GF+FF +Q IS ELD SG+ V RVY LL+VLEF S+RKRMSV+VR+
Sbjct: 545 AAFVVAAREFGFEFFSRTQNGISFRELDLASGKTVERVYRLLNVLEFNSARKRMSVIVRD 604
Query: 418 PENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRI 477
+ +LLLL KGAD+VMFERL+K+G++FE +TR H+N YA+AGLRTL++AYRE+ E+EY
Sbjct: 605 EDGRLLLLSKGADNVMFERLAKNGRKFEEKTREHVNEYADAGLRTLILAYREVDENEYIE 664
Query: 478 WEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIK 537
+ K F +AK SVT+DRE+L+ E++ERDLILLGATAVEDKLQ GVP+CIDKLAQAGIK
Sbjct: 665 FSKNFNEAKNSVTADRESLIDEITEQMERDLILLGATAVEDKLQNGVPDCIDKLAQAGIK 724
Query: 538 VWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597
+WVLTGDKMETAINIG+ACSLLRQEMKQI+I L++P ++ALEK G+K+ I S ESV
Sbjct: 725 IWVLTGDKMETAINIGFACSLLRQEMKQIIINLETPHIKALEKAGEKDAIEHASRESVVN 784
Query: 598 QIREGISQVNSAKESKV--TFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPK 655
Q+ EG + + ++ + F L+IDGKSL +AL+ +K FLDLA CASVICCRSSPK
Sbjct: 785 QMEEGKALLTASSSASSHEAFALIIDGKSLTYALEDDFKKKFLDLATGCASVICCRSSPK 844
Query: 656 QKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF 714
QKALVTRLVK GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD AIAQFR+
Sbjct: 845 QKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRY 904
Query: 715 LERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVF 774
LERLLLVHGHWCY RIS MICYFFYKN+TFG T+F YEAY SFS +PAYNDW++S +NVF
Sbjct: 905 LERLLLVHGHWCYSRISSMICYFFYKNITFGVTVFLYEAYTSFSAQPAYNDWFLSLFNVF 964
Query: 775 FTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFT 834
F+SLPVIALGVFDQDVSAR C K+PLLYQEGVQN+LFSW RI+GWM NGV +A+ IFF
Sbjct: 965 FSSLPVIALGVFDQDVSARYCYKFPLLYQEGVQNLLFSWKRIIGWMFNGVFTALAIFFLC 1024
Query: 835 TNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWY 894
S+ +Q + +G E+LG MY+ VVW VN QMAL+I+YFTW+QH IWGS+A WY
Sbjct: 1025 KESLKHQLYNPNGKTAGREILGGTMYTCVVWVVNLQMALAISYFTWLQHIVIWGSVAFWY 1084
Query: 895 IFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMY 954
IFL++YG++ P+FST AYKV +EA AP+ YWLTTL V+ L+P+F++++ Q RF P Y
Sbjct: 1085 IFLMIYGAITPSFSTDAYKVFIEALAPAPSYWLTTLFVMFFALIPFFVFKSVQMRFFPGY 1144
Query: 955 HDLIQRQRLEGSETE 969
H +IQ R EG +
Sbjct: 1145 HQMIQWIRYEGHSND 1159
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LNQ4|ALA4_ARATH Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1204 bits (3116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/1019 (56%), Positives = 750/1019 (73%), Gaps = 34/1019 (3%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
MNLDGETNLK+KRSLE T L D +SF+ FT +I+CEDPN LY+FVG L+YE + +PL
Sbjct: 195 MNLDGETNLKVKRSLEVTLSLDDYDSFKDFTGIIRCEDPNPSLYTFVGNLEYERQIFPLD 254
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLI 120
P QILLRDSKL+NT YVYGVVVFTGHDTKVMQN+T PSKRS+IE+ MD I+Y L LI
Sbjct: 255 PSQILLRDSKLRNTPYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKTMDYIIYTLLVLLI 314
Query: 121 LISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 180
LIS S F ETK + + WYL+P++ +P A F+H +T L+LYGYL
Sbjct: 315 LISCISSSGFAWETKFHMP----KWWYLRPEEPENLTNPSNPVYAGFVHLITALLLYGYL 370
Query: 181 IPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTL 240
IPISLY+SIE+VKVLQ+ FIN D MY ++ PA ARTSNLNEELGQVDTILSDKTGTL
Sbjct: 371 IPISLYVSIEVVKVLQASFINKDLHMYDSESGVPAHARTSNLNEELGQVDTILSDKTGTL 430
Query: 241 TCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDD--SQTDAPGLNGNIVESGK 298
TCN M+F+KCS+AG +YG +EVE A++ E + S+T P +E
Sbjct: 431 TCNQMDFLKCSIAGTSYGVRSSEVEVAAAQQMAVDLDEHGEVSSRTSTPRAQARDIEVES 490
Query: 299 SV------KGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEA 352
S+ KGF F D R+M+G W+ EPH+D I FFR+LAICHTAIP++NEETG+ +YEA
Sbjct: 491 SITPRIPIKGFGFEDIRLMDGNWLREPHTDDILLFFRILAICHTAIPELNEETGKYTYEA 550
Query: 353 ESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMS 412
ESPDEA+F+ AA E GF FF +Q+S+ +HE SGQ + R Y++L++L+FTS RKRMS
Sbjct: 551 ESPDEASFLTAASEFGFVFFKRTQSSVYVHERLSHSGQTIEREYKVLNLLDFTSKRKRMS 610
Query: 413 VMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGE 472
V+VR+ E Q+LLLCKGADS++FERL+K+G+ + T +H+N Y EAGLRTL ++YR+L E
Sbjct: 611 VVVRDEEGQILLLCKGADSIIFERLAKNGKVYLGPTTKHLNEYGEAGLRTLALSYRKLDE 670
Query: 473 DEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLA 532
+EY W EF KAKTS+ SDR+ L+ ++ IE+DLIL+GATAVEDKLQKGVP+CIDKLA
Sbjct: 671 EEYSAWNAEFHKAKTSIGSDRDELLERISDMIEKDLILVGATAVEDKLQKGVPQCIDKLA 730
Query: 533 QAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSL 592
QAG+K+WVLTGDKMETAINIGY+CSLLRQ MKQI IT+ + + + + + K+NI
Sbjct: 731 QAGLKLWVLTGDKMETAINIGYSCSLLRQGMKQICITVVNSEGASQDAKAVKDNILN--- 787
Query: 593 ESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRS 652
QI + + V K+ F L+IDGK+L +AL+ +++ FL LA+DCASVICCR
Sbjct: 788 -----QITKAVQMVKLEKDPHAAFALIIDGKTLTYALEDEMKYQFLALAVDCASVICCRV 842
Query: 653 SPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711
SPKQKALVTRLVK GTGK TLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD++IAQ
Sbjct: 843 SPKQKALVTRLVKEGTGKITLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQ 902
Query: 712 FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCY 771
FRFLERLL+VHGHWCY+RI+ MICYFFYKN+ FG TLF++EA+ FSG+ YND+Y+ +
Sbjct: 903 FRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSVYNDYYLLLF 962
Query: 772 NVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIF 831
NV TSLPVIALGVF+QDVS+ +CL++P LYQ+G +N+ F W RILGWM NGV S+++IF
Sbjct: 963 NVVLTSLPVIALGVFEQDVSSEICLQFPALYQQGKKNLFFDWYRILGWMGNGVYSSLVIF 1022
Query: 832 FFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIA 891
F I+ QAFR G D + +G M++ ++WAVN Q+AL++++FTWIQH IWGSI
Sbjct: 1023 FLNIGIIYEQAFRVSGQTADMDAVGTTMFTCIIWAVNVQIALTVSHFTWIQHVLIWGSIG 1082
Query: 892 LWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFR 951
LWY+F+ +YG +PP+ S Y++LVE AP+ +YW+ T LV V+T+LPYF + +FQ
Sbjct: 1083 LWYLFVALYGMMPPSLSGNIYRILVEILAPAPIYWIATFLVTVTTVLPYFAHISFQRFLH 1142
Query: 952 PMYHDLIQ-----------RQRLEGSETEISSQTEVSSELPAQVEIKMQHLKANLRQRN 999
P+ H +IQ R+ T+ +T++ A+V+ K++HL++ L ++
Sbjct: 1143 PLDHHIIQEIKYYKRDVEDRRMWTRERTKAREKTKIG--FTARVDAKIRHLRSKLNKKQ 1199
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SGG3|ALA5_ARATH Putative phospholipid-transporting ATPase 5 OS=Arabidopsis thaliana GN=ALA5 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1189 bits (3077), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 570/1027 (55%), Positives = 745/1027 (72%), Gaps = 40/1027 (3%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
MNLDGETNLK+KRSLE + L D+ESF+ F A I+CEDPN LY+FVG L++E + +PL
Sbjct: 195 MNLDGETNLKVKRSLEVSLPLDDDESFKNFMATIRCEDPNPNLYTFVGNLEFERQTFPLD 254
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLI 120
P QILLRDSKL+NT YVYGVVVFTG DTKVMQN+T PSKRS+IER MD I+Y L LI
Sbjct: 255 PSQILLRDSKLRNTTYVYGVVVFTGFDTKVMQNSTKSPSKRSRIERTMDYIIYTLLVLLI 314
Query: 121 LISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 180
LIS S F ET+ + + WYL+P + F +P A +H +T L+LYGYL
Sbjct: 315 LISCISSSGFAWETEFHMP----KMWYLRPGEPIDFTNPINPIYAGVVHLITALLLYGYL 370
Query: 181 IPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTL 240
IPISLY+SIE+VKV Q+ FIN D MY +++ PA ARTSNLNEELGQV TILSDKTGTL
Sbjct: 371 IPISLYVSIEVVKVWQASFINQDLHMYDDESGVPANARTSNLNEELGQVHTILSDKTGTL 430
Query: 241 TCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKG---ERTFEVDD---SQTDAPGL----- 289
TCN M+F+KCS+AG +YG +EVE AK+ E E+ SQT G
Sbjct: 431 TCNQMDFLKCSIAGTSYGVRSSEVEVAAAKQMAVDLEEHGEISSTPQSQTKVYGTWDSSR 490
Query: 290 --------NGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDV 341
+ N +KGF F D R+MNG W+ E + I +FFR+LAICHTAIP++
Sbjct: 491 TQEIEVEGDNNYNTPRAPIKGFGFEDNRLMNGNWLRESQPNDILQFFRILAICHTAIPEL 550
Query: 342 NEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHV 401
NEETG+ +YEAESPDEA+F+ AARE GF+FF +Q+S+ + E SGQ + R Y++L++
Sbjct: 551 NEETGKYTYEAESPDEASFLAAAREFGFEFFKRTQSSVFIRERFSGSGQIIEREYKVLNL 610
Query: 402 LEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLR 461
LEFTS RKRM+V+VR+ E Q+LLLCKGADS++FERL+K+G+ + T RH+ Y EAGLR
Sbjct: 611 LEFTSKRKRMTVIVRDEEGQILLLCKGADSIIFERLAKNGKTYLGPTTRHLTEYGEAGLR 670
Query: 462 TLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQ 521
TL +AYR+L EDEY W EFLKAKTS+ SDR+ L+ + A+ IE++LIL+GATAVEDKLQ
Sbjct: 671 TLALAYRKLDEDEYAAWNSEFLKAKTSIGSDRDELLETGADMIEKELILIGATAVEDKLQ 730
Query: 522 KGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQ 581
KGVP+CIDKLAQAG+K+WVLTGDKMETAINIG+ACSLLRQ M+QI IT ++ +
Sbjct: 731 KGVPQCIDKLAQAGLKLWVLTGDKMETAINIGFACSLLRQGMRQICIT-------SMNSE 783
Query: 582 GDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLA 641
G ++ +V E++ Q+ + + V K+ F L+IDGK+L +AL+ ++ FL LA
Sbjct: 784 GGSQDSKRVVKENILNQLTKAVQMVKLEKDPHAAFALIIDGKTLTYALEDDMKYQFLALA 843
Query: 642 IDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 700
+DCASVICCR SPKQKALV RLVK GTGKTTLAIGDGANDVGM+QEADIGVGISGVEGMQ
Sbjct: 844 VDCASVICCRVSPKQKALVVRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQ 903
Query: 701 AVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGR 760
AVM+SD++IAQFRFLERLL+VHGHWCY+RI+ MICYFFYKN+ FG TLF++EA+ FSG+
Sbjct: 904 AVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQ 963
Query: 761 PAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWM 820
YND+Y+ +NV TSLPVIALGVF+QDVS+ +CL++P LYQ+G +N+ F W RILGWM
Sbjct: 964 SVYNDYYLLLFNVVLTSLPVIALGVFEQDVSSEICLQFPALYQQGTKNLFFDWSRILGWM 1023
Query: 821 SNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTW 880
NGV ++++IFF I++QAFR +G D + +G M++ ++WA N Q+AL++++FTW
Sbjct: 1024 CNGVYASLVIFFLNIGIIYSQAFRDNGQTADMDAVGTTMFTCIIWAANVQIALTMSHFTW 1083
Query: 881 IQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPY 940
IQH IWGSI +WY+F+ +Y +PP++S Y++L E AP+ +YW+ TLLV V+ +LPY
Sbjct: 1084 IQHVLIWGSIGMWYLFVAIYSMMPPSYSGNIYRILDEILAPAPIYWMATLLVTVAAVLPY 1143
Query: 941 FLYRAFQTRFRPMYHDLIQRQRLEGSETE---------ISSQTEVSSELPAQVEIKMQHL 991
+ AFQ P+ H +IQ + G + E ++ + A+V+ K++HL
Sbjct: 1144 VAHIAFQRFLNPLDHHIIQEIKYYGRDIEDARLWTRERTKAREKTKIGFTARVDAKIRHL 1203
Query: 992 KANLRQR 998
++ L ++
Sbjct: 1204 RSKLNKK 1210
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LVK9|ALA7_ARATH Putative phospholipid-transporting ATPase 7 OS=Arabidopsis thaliana GN=ALA7 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 1163 bits (3009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1047 (54%), Positives = 746/1047 (71%), Gaps = 71/1047 (6%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
MNLDGETNLK+KR L+ T L +++FQ F+ IKCEDPN LY+FVG L+Y+G+ YPL
Sbjct: 195 MNLDGETNLKVKRCLDVTLPLERDDTFQSFSGTIKCEDPNPNLYTFVGNLEYDGQVYPLD 254
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLI 120
P QILLRDSKL+NT YVYGVVVFTGHDTKVMQN+T PSKRS+IE++MD I+Y LF+ L+
Sbjct: 255 PSQILLRDSKLRNTSYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLFALLV 314
Query: 121 LISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 180
L+S S+ F + TK + WYL+PD +PR A +H +T ++LYGYL
Sbjct: 315 LVSFISSLGFAVMTKMHMGDW----WYLRPDKPERLTNPRNPFHAWVVHLITAVLLYGYL 370
Query: 181 IPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTL 240
IPISLY+SIE+VKVLQ+ FIN D MY ++ PA+ARTSNLNEELGQVDTILSDKTGTL
Sbjct: 371 IPISLYVSIELVKVLQATFINQDLQMYDSESGTPAQARTSNLNEELGQVDTILSDKTGTL 430
Query: 241 TCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ----TDAPGLNGNIVES 296
TCN M+F+KCS+AG +YG +EVE AK + ++D+ Q T P G +
Sbjct: 431 TCNQMDFLKCSIAGTSYGVRASEVELAAAK---QMAIDLDEEQGEEVTHLPRTRGRMHGY 487
Query: 297 GK---------------------------SVKGFNFRDERIMNGQWVNEPHSDVIQKFFR 329
K +KGF+F D+R+M G W+NEP+SD I F R
Sbjct: 488 AKMPSKTSSDIELETVITATDEGDQTQSTGIKGFSFEDQRLMGGNWLNEPNSDDILMFLR 547
Query: 330 VLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSG 389
+LA+CHTAIP+V+E+TG+ +YEAESPDE AF++AA E GF+F +Q+S+ + E SG
Sbjct: 548 ILAVCHTAIPEVDEDTGKCTYEAESPDEVAFLVAAGEFGFEFTKRTQSSVFISERH--SG 605
Query: 390 QKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETR 449
Q V R Y++L+VL+FTS RKRMSV+VR+ + Q+LLLCKGADS++FERLSK+G+ + T
Sbjct: 606 QPVEREYKVLNVLDFTSKRKRMSVIVRDEKGQILLLCKGADSIIFERLSKNGKNYLEATS 665
Query: 450 RHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLI 509
+H+N Y EAGLRTL ++YR+L E EY IW EF KAKTSV +DR+ ++ ++ +E++LI
Sbjct: 666 KHLNGYGEAGLRTLALSYRKLDETEYSIWNSEFHKAKTSVGADRDEMLEKVSDMMEKELI 725
Query: 510 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVIT 569
L+GATAVEDKLQKGVP+CIDKLAQAG+K+WVLTGDKMETAINIGYACSLLRQ MKQI I
Sbjct: 726 LVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQIYIA 785
Query: 570 LDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFAL 629
L + ++G ++ + E++ QI + K+ F L+IDGK+L +AL
Sbjct: 786 LRN-------EEGSSQDPEAAARENILMQIINASQMIKLEKDPHAAFALIIDGKTLTYAL 838
Query: 630 DKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEAD 688
+ ++ FL LA+DCASVICCR SPKQKALVTRL K GTGKTTLAIGDGANDVGM+QEAD
Sbjct: 839 EDDIKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEAD 898
Query: 689 IGVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTL 748
IGVGISGVEGMQAVM+SD++IAQFRFLERLL+VHGHWCY+RI+ MICYFFYKN+TFG TL
Sbjct: 899 IGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNITFGLTL 958
Query: 749 FWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQN 808
F++EA+ FSG+ YND Y+ +NV TSLPVIALGVF+QDVS+ +CL++P LYQ+G +N
Sbjct: 959 FYFEAFTGFSGQAIYNDSYLLLFNVILTSLPVIALGVFEQDVSSEVCLQFPALYQQGPKN 1018
Query: 809 ILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVN 868
+ F W RI+GWM+NGV ++++IF Q+F G D + +G AM++ ++WAVN
Sbjct: 1019 LFFDWYRIIGWMANGVYASVVIFSLNIGIFHVQSFCSGGQTADMDAMGTAMFTCIIWAVN 1078
Query: 869 CQMALSINYFTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLT 928
Q+AL++++FTWIQH IWGSI WYIFL ++G LPP S + +L E AP+ ++WLT
Sbjct: 1079 VQIALTMSHFTWIQHVLIWGSIVTWYIFLALFGMLPPKVSGNIFHMLSETLAPAPIFWLT 1138
Query: 929 TLLVVVSTLLPYFLYRAFQTRFRPMYHDLIQ----------------RQRLEGSETEISS 972
+LLV+ +T LPY Y +FQ P+ H +IQ R+R + E
Sbjct: 1139 SLLVIAATTLPYLAYISFQRSLNPLDHHIIQEIKHFRIDVQDECMWTRERSKARE----- 1193
Query: 973 QTEVSSELPAQVEIKMQHLKANLRQRN 999
+T++ + A+V+ K++ L+ L++++
Sbjct: 1194 KTKIG--VTARVDAKIRQLRGRLQRKH 1218
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SLK6|ALA6_ARATH Phospholipid-transporting ATPase 6 OS=Arabidopsis thaliana GN=ALA6 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1156 bits (2991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/1038 (54%), Positives = 737/1038 (71%), Gaps = 52/1038 (5%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
MNLDGETNLK+KR L+AT L +ESFQ F+ IKCEDPN LY+FVG L+ +G+ YPL
Sbjct: 196 MNLDGETNLKVKRCLDATLALEKDESFQNFSGTIKCEDPNPNLYTFVGNLECDGQVYPLD 255
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLI 120
P QILLRDSKL+NT YVYGVVVFTGHDTKVMQN+T PSKRS+IE++MD I+Y LF+ L+
Sbjct: 256 PNQILLRDSKLRNTAYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLFALLL 315
Query: 121 LISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 180
+S S+ F + TK + WYL+PD +P A +H +T L+LYGYL
Sbjct: 316 TVSFISSLGFAVMTKLLM----AEWWYLRPDKPESLTNPTNPLYAWVVHLITALLLYGYL 371
Query: 181 IPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTL 240
IPISLY+SIE+VKVLQ+ FIN D +Y ++ PA+ARTSNLNEELGQVDTILSDKTGTL
Sbjct: 372 IPISLYVSIEVVKVLQAHFINQDLQLYDSESGTPAQARTSNLNEELGQVDTILSDKTGTL 431
Query: 241 TCNSMEFVKCSVAGVAYGRVMTEVERTLAKR-------KGERTFEVD------------- 280
TCN M+F+KCS+AG +YG +EVE AK+ KGE +
Sbjct: 432 TCNQMDFLKCSIAGTSYGVRASEVELAAAKQMAMDLEEKGEEVANLSMNKGRTQRYAKLA 491
Query: 281 -------DSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAI 333
+ +T + + VKGF+F D R+MN W+NEP+SD I FFR+LA+
Sbjct: 492 SKTSSDFELETVVTASDEKDQKQNTGVKGFSFEDNRLMNENWLNEPNSDDILMFFRILAV 551
Query: 334 CHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVN 393
CHTAIP+V+E+TG +YEAESPDE AF++A+RE GF+F +Q+S+ + E SGQ V+
Sbjct: 552 CHTAIPEVDEDTGMCTYEAESPDEVAFLVASREFGFEFTKRTQSSVFIAERFSSSGQPVD 611
Query: 394 RVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHIN 453
R Y++L++L+FTS RKRMS +VR+ E Q+LLLCKGADS++FERLSK G+++ T +H+N
Sbjct: 612 REYKILNLLDFTSKRKRMSAIVRDEEGQILLLCKGADSIIFERLSKSGKEYLGATSKHLN 671
Query: 454 RYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGA 513
Y EAGLRTL + YR+L E EY W EF KAKTSV +DR+ ++ ++ +E++LIL+GA
Sbjct: 672 VYGEAGLRTLALGYRKLDETEYAAWNSEFHKAKTSVGADRDEMLEKVSDMMEKELILVGA 731
Query: 514 TAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSP 573
TAVEDKLQKGVP+CID LAQAG+K+WVLTGDKMETAINIGYACSLLRQ MKQI I+L +
Sbjct: 732 TAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQISISLTNV 791
Query: 574 DMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKL 633
+ + +N + ES+ QI + K+ F L+IDGK+L +AL +
Sbjct: 792 EESS-------QNSEAAAKESILMQITNASQMIKIEKDPHAAFALIIDGKTLTYALKDDV 844
Query: 634 EKMFLDLAIDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVG 692
+ FL LA+DCASVICCR SPKQKALVTRL K GTGKTTLAIGDGANDVGM+QEADIGVG
Sbjct: 845 KYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVG 904
Query: 693 ISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYE 752
ISGVEGMQAVM+SD++IAQFRFLERLL+VHGHWCY+RI+ MICYFFYKN+TFG TLF++E
Sbjct: 905 ISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNITFGLTLFYFE 964
Query: 753 AYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFS 812
+ FSG+ YND Y+ +NV TSLPVI+LGVF+QDV + +CL++P LYQ+G +N+ F
Sbjct: 965 CFTGFSGQSIYNDSYLLLFNVVLTSLPVISLGVFEQDVPSDVCLQFPALYQQGPKNLFFD 1024
Query: 813 WPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMA 872
W RILGWM NGV ++I+IF Q+FR DG D +G AM++ ++WAVN Q+A
Sbjct: 1025 WYRILGWMGNGVYASIVIFTLNLGIFHVQSFRSDGQTADMNAMGTAMFTCIIWAVNVQIA 1084
Query: 873 LSINYFTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLV 932
L++++FTWIQH IWGSI WY+FL +YG LP S + +LVE AP+ ++WLT+LLV
Sbjct: 1085 LTMSHFTWIQHVMIWGSIGAWYVFLALYGMLPVKLSGNIFHMLVEILAPAPIFWLTSLLV 1144
Query: 933 VVSTLLPYFLYRAFQTRFRPMYHDLIQR----------QRLEGSE-TEISSQTEVSSELP 981
+ +T LPY + ++Q P+ H +IQ +R+ E ++ +T++
Sbjct: 1145 IAATTLPYLFHISYQRSVNPLDHHIIQEIKHFRIDVEDERMWKREKSKAREKTKIG--FT 1202
Query: 982 AQVEIKMQHLKANLRQRN 999
A+V+ K++ L+ L++++
Sbjct: 1203 ARVDAKIRQLRGRLQRKH 1220
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9XIE6|ALA3_ARATH Phospholipid-transporting ATPase 3 OS=Arabidopsis thaliana GN=ALA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/989 (44%), Positives = 632/989 (63%), Gaps = 31/989 (3%)
Query: 2 NLDGETNLKLKRSLEAT-NHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
NLDGETNLK++++LE T ++L E++++ F I+CE PN LY+F G L + + PLS
Sbjct: 188 NLDGETNLKIRKALERTWDYLVPEKAYE-FKGEIQCEQPNNSLYTFTGNLVVQKQTLPLS 246
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLI 120
P Q+LLR L+NT+Y+ G VVFTGH+TKVM NA + PSKRS +E+K+DK++ +F L+
Sbjct: 247 PDQLLLRGCSLRNTEYIVGAVVFTGHETKVMMNAMNAPSKRSTLEKKLDKLIITIFCVLV 306
Query: 121 LISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 180
+ G++ I T R+ YL ++ ++ R + F F T + L+ +
Sbjct: 307 TMCLIGAIGCSIVTDREDK-------YLGLHNSD--WEYRNGLMIGFFTFFTLVTLFSSI 357
Query: 181 IPISLYISIEIVKVLQSV-FINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGT 239
IPISLY+SIE++K +QS FIN D +MY+ +T+ PA ARTSNLNEELGQV+ I SDKTGT
Sbjct: 358 IPISLYVSIEMIKFIQSTQFINRDLNMYHAETNTPASARTSNLNEELGQVEYIFSDKTGT 417
Query: 240 LTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKS 299
LT N MEF KCS+ GV+YG +TE+E+ +A+R G + E S G I E
Sbjct: 418 LTRNLMEFFKCSIGGVSYGCGVTEIEKGIAQRHGLKVQEEQRS-------TGAIRE---- 466
Query: 300 VKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAA 359
KGFNF D R+M G W NEP+ D+ ++ FR LAICHT +P+ +E +I Y+A SPDEAA
Sbjct: 467 -KGFNFDDPRLMRGAWRNEPNPDLCKELFRCLAICHTVLPEGDESPEKIVYQAASPDEAA 525
Query: 360 FVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRV-YELLHVLEFTSSRKRMSVMVRNP 418
V AA+ GF F+ + T + + E K+ V YE+L+VLEF S+RKR SV+ R P
Sbjct: 526 LVTAAKNFGFFFYRRTPTMVYVRESHVEKMGKIQDVAYEILNVLEFNSTRKRQSVVCRFP 585
Query: 419 ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIW 478
+ +L+L CKGAD+V+FERL+ TR H+ + +GLRTL +AY++L + Y W
Sbjct: 586 DGRLVLYCKGADNVIFERLANGMDDVRKVTREHLEHFGSSGLRTLCLAYKDLNPETYDSW 645
Query: 479 EKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKV 538
++F++AK+++ DRE + AE IE+DLIL+G+TA+EDKLQ+GVP CI+ L++AGIK+
Sbjct: 646 NEKFIQAKSAL-RDREKKLDEVAELIEKDLILIGSTAIEDKLQEGVPTCIETLSRAGIKI 704
Query: 539 WVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598
WVLTGDKMETAINI YAC+L+ EMKQ VI+ ++ + E++GD+ I +V E V ++
Sbjct: 705 WVLTGDKMETAINIAYACNLINNEMKQFVISSETDAIREAEERGDQVEIARVIKEEVKRE 764
Query: 599 IREGISQVNSAKESKV--TFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQ 656
+++ + + + + LVIDGK L +ALD L M L L+++C SV+CCR SP Q
Sbjct: 765 LKKSLEEAQHSLHTVAGPKLSLVIDGKCLMYALDPSLRVMLLSLSLNCTSVVCCRVSPLQ 824
Query: 657 KALVTRLV-KGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFL 715
KA VT LV KG K TL+IGDGANDV M+Q A +G+GISG+EGMQAVM+SD+AIAQFRFL
Sbjct: 825 KAQVTSLVRKGAQKITLSIGDGANDVSMIQAAHVGIGISGMEGMQAVMASDFAIAQFRFL 884
Query: 716 ERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFF 775
LLLVHG W Y RI ++ YFFYKNLTF T FW+ FSG+ Y+DW+ S +NV F
Sbjct: 885 TDLLLVHGRWSYLRICKVVMYFFYKNLTFTLTQFWFTFRTGFSGQRFYDDWFQSLFNVVF 944
Query: 776 TSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTT 835
T+LPVI LG+F++DVSA L +YP LY+EG++N F W + W ++ V +++ + F T
Sbjct: 945 TALPVIVLGLFEKDVSASLSKRYPELYREGIRNSFFKWRVVAVWATSAVYQSLVCYLFVT 1004
Query: 836 NSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYI 895
S F A G + +++ +V AVN ++ L N T + + GSI W +
Sbjct: 1005 TSSFG-AVNSSGKVFGLWDVSTMVFTCLVIAVNVRILLMSNSITRWHYITVGGSILAWLV 1063
Query: 896 FLVVY-GSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMY 954
F VY G + P ++ + ++ T LLV + +LL F+++ + F P
Sbjct: 1064 FAFVYCGIMTPHDRNENVYFVIYVLMSTFYFYFTLLLVPIVSLLGDFIFQGVERWFFPYD 1123
Query: 955 HDLIQRQRLEGSETEISSQTEVSSELPAQ 983
+ ++Q S+ + Q EV +EL Q
Sbjct: 1124 YQIVQEIHRHESDASKADQLEVENELTPQ 1152
|
Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Required for secretory processes during plant development. Requires an interaction with an ALIS protein for activity. Has activity with phosphatidylserine, phosphatidylcholine and phosphatidylethanolamine, but not with lysolipid. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1000 | ||||||
| 225452444 | 1180 | PREDICTED: putative phospholipid-transpo | 0.988 | 0.837 | 0.799 | 0.0 | |
| 356571326 | 1189 | PREDICTED: putative phospholipid-transpo | 0.993 | 0.835 | 0.776 | 0.0 | |
| 255567333 | 1181 | Phospholipid-transporting ATPase, putati | 0.991 | 0.839 | 0.775 | 0.0 | |
| 356513941 | 1194 | PREDICTED: putative phospholipid-transpo | 0.993 | 0.831 | 0.766 | 0.0 | |
| 334185669 | 1189 | phospholipid-translocating ATPase [Arabi | 0.986 | 0.829 | 0.762 | 0.0 | |
| 270342132 | 1113 | E1-E2 type truncated ATPase [Phaseolus v | 0.993 | 0.892 | 0.766 | 0.0 | |
| 357495971 | 1193 | ATPase [Medicago truncatula] gi|35549328 | 0.992 | 0.831 | 0.741 | 0.0 | |
| 297815050 | 1173 | hypothetical protein ARALYDRAFT_484577 [ | 0.969 | 0.826 | 0.756 | 0.0 | |
| 224055525 | 1144 | aminophospholipid ATPase [Populus tricho | 0.943 | 0.824 | 0.746 | 0.0 | |
| 147821807 | 1182 | hypothetical protein VITISV_037830 [Viti | 0.919 | 0.777 | 0.745 | 0.0 |
| >gi|225452444|ref|XP_002277689.1| PREDICTED: putative phospholipid-transporting ATPase 8-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1644 bits (4256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 798/998 (79%), Positives = 886/998 (88%), Gaps = 10/998 (1%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
MNLDGETNLKLK +LE T+ LRDE+SFQ+F AVIKCEDPNE LYSFVGTL Y G + LS
Sbjct: 191 MNLDGETNLKLKHALEETSSLRDEKSFQQFKAVIKCEDPNEDLYSFVGTLSYNGTPHELS 250
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLI 120
QQILLRDSKL+NTD +YGVV+FTGHDTKVMQNATDPPSKRSKIER+MDKIVY+LFSTL+
Sbjct: 251 LQQILLRDSKLRNTDCIYGVVIFTGHDTKVMQNATDPPSKRSKIERRMDKIVYILFSTLV 310
Query: 121 LISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 180
LIS GSVFFG ET++DI GGK RRWYL+PDD TVFYDP+R LAAFLHFLTGLMLYGYL
Sbjct: 311 LISFIGSVFFGTETRKDISGGKYRRWYLRPDDTTVFYDPQRPVLAAFLHFLTGLMLYGYL 370
Query: 181 IPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTL 240
IPISLY+SIEIVKVLQS+FIN D+DMYYE+TDKPA ARTSNLNEELGQ+DTILSDKTGTL
Sbjct: 371 IPISLYVSIEIVKVLQSIFINQDQDMYYEETDKPAHARTSNLNEELGQIDTILSDKTGTL 430
Query: 241 TCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSV 300
TCNSMEFVKCS+AG AYGR MTEVER LA+R +R EV D+ +D G +G I GK +
Sbjct: 431 TCNSMEFVKCSIAGTAYGRGMTEVERALARRN-DRPHEVGDASSDLLGDSGEI-NLGKPI 488
Query: 301 KGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAF 360
KGFNFRDERIM+G+WVNEPH+DVIQ+FFRVLAICHTAIPD+NE GEISYEAESPDEAAF
Sbjct: 489 KGFNFRDERIMHGRWVNEPHADVIQRFFRVLAICHTAIPDINE--GEISYEAESPDEAAF 546
Query: 361 VIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPEN 420
VIAARE+GF+FF QT ISLHELD SG +V+R Y+LLHVLEF SSRKRMSV+VRNPEN
Sbjct: 547 VIAARELGFEFFSRKQTCISLHELDHKSGGEVDRTYKLLHVLEFKSSRKRMSVIVRNPEN 606
Query: 421 QLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEK 480
QLLLL KGADSVMF+RLSK G+ FEA+TR HI +YAEAGLRTLV+AYR+L E+EY WE+
Sbjct: 607 QLLLLSKGADSVMFDRLSKEGRMFEAQTRDHIRKYAEAGLRTLVLAYRDLDEEEYEAWEE 666
Query: 481 EFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWV 540
EF +AKTSV +D +ALV +A +KIERDLILLGATAVEDKLQKGVPECID+LAQAGIK+WV
Sbjct: 667 EFSRAKTSVGADHDALVDAACDKIERDLILLGATAVEDKLQKGVPECIDRLAQAGIKIWV 726
Query: 541 LTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIR 600
LTGDKMETAINIGYACSLLRQ MKQIVITLDS D++ L KQGDKE I K S ES+ KQIR
Sbjct: 727 LTGDKMETAINIGYACSLLRQGMKQIVITLDSQDIDVLRKQGDKEAIAKASCESIRKQIR 786
Query: 601 EGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALV 660
EG SQ+ SAKE+ V+F L+IDG+SL FAL+K LEK FL+LAIDCASVICCRSSPKQKALV
Sbjct: 787 EGKSQLTSAKENSVSFALIIDGESLSFALNKNLEKSFLELAIDCASVICCRSSPKQKALV 846
Query: 661 TRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLL 719
TRLVK GTG+TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD+AIAQFRFLERLL
Sbjct: 847 TRLVKMGTGETTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDFAIAQFRFLERLL 906
Query: 720 LVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLP 779
LVHGHWCYRRISMMICYFFYKN+ FGFTLFW+EAYASFSG+PAYNDWYMS YNVFFTSLP
Sbjct: 907 LVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQPAYNDWYMSFYNVFFTSLP 966
Query: 780 VIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIF 839
VIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGV+S+IIIFFFTT SI
Sbjct: 967 VIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVISSIIIFFFTTKSII 1026
Query: 840 NQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYIFLVV 899
QAFR+DG D+EVLG MY+SVVWAVNCQ+ALSINYFTWIQHFFIWGSI WYIFLV+
Sbjct: 1027 PQAFRRDGQVTDFEVLGATMYTSVVWAVNCQIALSINYFTWIQHFFIWGSIIFWYIFLVI 1086
Query: 900 YGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMYHDLIQ 959
YGSL P STTAY+VLVEACAPS+LYWL TLL V+STLLPYF YRAFQTRFRP+YHD+IQ
Sbjct: 1087 YGSLSPVVSTTAYRVLVEACAPSVLYWLATLLGVISTLLPYFSYRAFQTRFRPLYHDIIQ 1146
Query: 960 RQRLEGSETEISSQTEVSSELPAQVEIKMQHLKANLRQ 997
++R EG ET+ + +ELP +V K+QHLK LR+
Sbjct: 1147 QKRSEGLETD-----DTPNELPHRVRDKIQHLKMGLRR 1179
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356571326|ref|XP_003553829.1| PREDICTED: putative phospholipid-transporting ATPase 8-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1639 bits (4245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 777/1001 (77%), Positives = 892/1001 (89%), Gaps = 8/1001 (0%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
MNLDGETNLKLK +LE + HL+DE+S QKF AV+KCEDPNE LYSF+GTLQY+GK+YPLS
Sbjct: 192 MNLDGETNLKLKHALEVSIHLQDEKSLQKFKAVVKCEDPNENLYSFIGTLQYDGKEYPLS 251
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLI 120
QQILLRDSKLKNTDY+YGVV+FTGHDTKVMQN+TDPPSKRSKIERKMDKI+Y+LFSTL+
Sbjct: 252 LQQILLRDSKLKNTDYIYGVVIFTGHDTKVMQNSTDPPSKRSKIERKMDKIIYILFSTLV 311
Query: 121 LISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 180
LIS GSVFFG+ETKRDI G+ RRWYL+PD+ TVFYDPRRA LAA LHFLT LMLYGYL
Sbjct: 312 LISFIGSVFFGVETKRDISSGRYRRWYLRPDNTTVFYDPRRATLAAVLHFLTALMLYGYL 371
Query: 181 IPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTL 240
IPISLY+SIE+VKVLQS+FINHD++MYYE+TD+PARARTSNLNEELGQVDTILSDKTGTL
Sbjct: 372 IPISLYVSIELVKVLQSIFINHDQEMYYEETDRPARARTSNLNEELGQVDTILSDKTGTL 431
Query: 241 TCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSV 300
TCNSMEFVKCS+ G+ YGR MTEVE+ LA+R + EVD +D G + + V+S +
Sbjct: 432 TCNSMEFVKCSIGGIPYGRGMTEVEKALARRGKDVESEVDGGSSDLLGQSNDFVDSRHPI 491
Query: 301 KGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAF 360
KGFNFRDERIMNGQWVNEP++D IQ+FFRVLAICHTAIPDV++E+ EISYEAESPDEAAF
Sbjct: 492 KGFNFRDERIMNGQWVNEPYTDFIQRFFRVLAICHTAIPDVDKESREISYEAESPDEAAF 551
Query: 361 VIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPEN 420
VIAARE+GF+FF +QTSISLHEL+ SG+KV+RVY+LLHVLEF+SSRKRMSV+VRN EN
Sbjct: 552 VIAARELGFEFFARTQTSISLHELNYESGKKVDRVYQLLHVLEFSSSRKRMSVIVRNEEN 611
Query: 421 QLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEK 480
QLLLLCKGADSVMFERLS+HG+QFEAETR HI RY+EAGLRTLVI YREL E+EY++W+
Sbjct: 612 QLLLLCKGADSVMFERLSQHGRQFEAETRDHIKRYSEAGLRTLVITYRELDEEEYKLWDN 671
Query: 481 EFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWV 540
EF K KT+VT DR+ALV +AA+K+ERDLILLGATAVED+LQKGVPECI+KLAQA IK+WV
Sbjct: 672 EFSKIKTTVTEDRDALVDAAADKMERDLILLGATAVEDRLQKGVPECIEKLAQAKIKLWV 731
Query: 541 LTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIR 600
LTGDKMETA+NIGYACSLLRQ+MKQIVITLDSPD+ +LEKQGDKE ++K S+ES+ KQIR
Sbjct: 732 LTGDKMETAVNIGYACSLLRQDMKQIVITLDSPDILSLEKQGDKEALSKASIESIKKQIR 791
Query: 601 EGISQVNSAKESKVT--FGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKA 658
EGISQ+ SAKES T FGL+IDGKSLD++L+K LE+ F +LAI+CASVICCRSSPKQKA
Sbjct: 792 EGISQIKSAKESSNTTGFGLIIDGKSLDYSLNKNLERAFFELAINCASVICCRSSPKQKA 851
Query: 659 LVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLER 717
VT+LVK GTGKT L+IGDGANDVGMLQEADIGVGISG EGMQAVM+SD+AIAQFRFLER
Sbjct: 852 RVTKLVKLGTGKTILSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAIAQFRFLER 911
Query: 718 LLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTS 777
LLLVHGHWCYRRISMMICYFFYKN+ FGFTLFW+EAYASFSG+ AYNDWYMS YNVFFTS
Sbjct: 912 LLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQAAYNDWYMSFYNVFFTS 971
Query: 778 LPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNS 837
LPVIALGVFDQDVSA+LCLK+P LY EGV++ILFSWPRILGWM NGVLS+++IFF TTNS
Sbjct: 972 LPVIALGVFDQDVSAKLCLKHPYLYLEGVEDILFSWPRILGWMLNGVLSSLVIFFLTTNS 1031
Query: 838 IFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYIFL 897
+ NQAFR+DG VD+E+LGV MY+ VVW VNCQMALSINYFTWIQHFFIWGSIA WY+F+
Sbjct: 1032 VLNQAFRRDGKVVDFEILGVTMYTCVVWTVNCQMALSINYFTWIQHFFIWGSIAFWYVFV 1091
Query: 898 VVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMYHDL 957
+VYG L P STTAY+V VEACAPS LYWL TLLVVV LLPYF YR+FQ+RF PMYHD+
Sbjct: 1092 LVYGYLSPAISTTAYRVFVEACAPSGLYWLVTLLVVVCVLLPYFSYRSFQSRFLPMYHDI 1151
Query: 958 IQRQRLEGSETEISSQTEVSSELPAQVEIKMQHLKANLRQR 998
IQR+++EG E +S ELP QV+ K+ HL+ L+QR
Sbjct: 1152 IQRKQVEGHEVGLS-----DDELPKQVQDKLLHLRERLKQR 1187
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255567333|ref|XP_002524646.1| Phospholipid-transporting ATPase, putative [Ricinus communis] gi|223536007|gb|EEF37665.1| Phospholipid-transporting ATPase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1639 bits (4243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 775/1000 (77%), Positives = 875/1000 (87%), Gaps = 9/1000 (0%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
MNLDGETNLKLK +LE T+ L DEESF+ F A++KCED NE LYSFVGTL Y G YPLS
Sbjct: 189 MNLDGETNLKLKHALEVTSSLCDEESFKNFVAMVKCEDSNENLYSFVGTLNYNGNHYPLS 248
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLI 120
PQQILLRDSKLKNT+Y+YGVV+FTGHDTKVMQNA DPPSKRSKIERKMDKI+Y+LFSTLI
Sbjct: 249 PQQILLRDSKLKNTEYIYGVVIFTGHDTKVMQNAVDPPSKRSKIERKMDKIIYILFSTLI 308
Query: 121 LISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 180
LIS GS+FFGIETKRDI+GG+ RRWYLQPD TVFYDP+RA LAAF HFLTGLMLYGYL
Sbjct: 309 LISFVGSLFFGIETKRDINGGEYRRWYLQPDVTTVFYDPQRASLAAFFHFLTGLMLYGYL 368
Query: 181 IPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTL 240
IPISLY+SIEIVKVLQS+FIN D+DMYYE+TD+PA ARTSNLNEELGQVDTILSDKTGTL
Sbjct: 369 IPISLYVSIEIVKVLQSIFINQDQDMYYEETDRPAHARTSNLNEELGQVDTILSDKTGTL 428
Query: 241 TCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSV 300
TCNSMEFVKCS+AG AYGR MTEVER LAKR + E D D P NGN GKS+
Sbjct: 429 TCNSMEFVKCSIAGSAYGRGMTEVERALAKRINDGLPEAGDDSADQPDDNGNTGYPGKSI 488
Query: 301 KGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAF 360
KGFNFRDERIMNGQW+NEP SDVIQKFF+VLAICHTA+P+ +E++GEI YEAESPDEAAF
Sbjct: 489 KGFNFRDERIMNGQWINEPQSDVIQKFFQVLAICHTAVPEKDEKSGEIFYEAESPDEAAF 548
Query: 361 VIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPEN 420
VIAAREVGF+ +QTSISL+ELDP +G+KV R+Y+LL VLEF+SSRKRMSV+VRN EN
Sbjct: 549 VIAAREVGFELCERTQTSISLYELDPAAGKKVKRMYQLLQVLEFSSSRKRMSVVVRNVEN 608
Query: 421 QLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEK 480
+L LL KGADSV+FERLSK G+ FE +T+ HI RYAEAGLRTLVIAYREL EDEY IWEK
Sbjct: 609 KLFLLSKGADSVIFERLSKDGRLFERKTKEHIKRYAEAGLRTLVIAYRELDEDEYGIWEK 668
Query: 481 EFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWV 540
+F +AK +VT+DR+ LV A+KIERDL+LLGATAVEDKLQKGVPECI+ LAQAGIK+WV
Sbjct: 669 DFSEAKATVTADRDVLVDEIADKIERDLVLLGATAVEDKLQKGVPECIETLAQAGIKIWV 728
Query: 541 LTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIR 600
LTGDKMETA+NIGYACSLLRQEMKQI+ITLDSPD+EALEKQGDKE I+K S SV +QI
Sbjct: 729 LTGDKMETAVNIGYACSLLRQEMKQIIITLDSPDIEALEKQGDKEAISKASFRSVMEQIS 788
Query: 601 EGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALV 660
G SQ+ +KES +FGLV+DGK+L ALDK LEK FL+LA+ CASVICCRS+PK KALV
Sbjct: 789 GGKSQL--SKESSTSFGLVVDGKALAIALDKSLEKKFLELALGCASVICCRSTPKHKALV 846
Query: 661 TRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLL 719
TRLVK TGKTTLA+GDGANDVGMLQE+DIGVGISG EGMQAVM+SD+AIAQFRFLERLL
Sbjct: 847 TRLVKMETGKTTLAVGDGANDVGMLQESDIGVGISGAEGMQAVMASDFAIAQFRFLERLL 906
Query: 720 LVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLP 779
LVHGHWCYRRI++MICYFFYKN+ FGFTLFW+EAY SFSG+PAYNDWYMS YNVFFTSLP
Sbjct: 907 LVHGHWCYRRIAIMICYFFYKNIAFGFTLFWFEAYTSFSGQPAYNDWYMSFYNVFFTSLP 966
Query: 780 VIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIF 839
VIALGVFDQDVS+RLCLKYP+LYQEGVQNILFSWPRILGWM NG+LS+I+IFFFTTNS+
Sbjct: 967 VIALGVFDQDVSSRLCLKYPVLYQEGVQNILFSWPRILGWMCNGILSSIVIFFFTTNSMI 1026
Query: 840 NQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYIFLVV 899
+Q+FR+DG VD+E+LG MY+ VVWAVNCQMALSINYFTWIQHFFIWGSIA WYIFL++
Sbjct: 1027 DQSFRRDGQMVDFEILGATMYTCVVWAVNCQMALSINYFTWIQHFFIWGSIAFWYIFLLI 1086
Query: 900 YGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMYHDLIQ 959
YGSL P STTA++VLVEACAPS LYWL TLLVV++TLLPYF YRAFQ+RF+PM HD+IQ
Sbjct: 1087 YGSLSPIVSTTAFRVLVEACAPSPLYWLVTLLVVIATLLPYFSYRAFQSRFQPMIHDIIQ 1146
Query: 960 RQRLEGSETEISSQTEVSSELPAQVEIKMQHLKANLRQRN 999
+R EGSE E +ELP+ V +KM L+ NLR RN
Sbjct: 1147 IRRSEGSE------PEACNELPSGVRVKMHQLQENLRHRN 1180
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513941|ref|XP_003525666.1| PREDICTED: putative phospholipid-transporting ATPase 8-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1626 bits (4211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 771/1006 (76%), Positives = 888/1006 (88%), Gaps = 13/1006 (1%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
MNLDGETNLKLK +LE T HL+DE+S QK+ A++KCEDPNE LYSF+GTLQY+GK+YPLS
Sbjct: 192 MNLDGETNLKLKHALEVTIHLQDEKSLQKYKAMVKCEDPNENLYSFIGTLQYDGKEYPLS 251
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLI 120
QQILLRDSKLKNTDY+YG+V+FTGHDTKVMQN+TDPPSKRSKIERKMDKI+Y+LFSTL+
Sbjct: 252 LQQILLRDSKLKNTDYIYGIVIFTGHDTKVMQNSTDPPSKRSKIERKMDKIIYILFSTLV 311
Query: 121 LISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 180
LIS GSVFFG+ETKRDI G+ RRWYL+PD+ TVFYDPRRA LAA LHFLT LMLYGYL
Sbjct: 312 LISFIGSVFFGVETKRDISSGRYRRWYLRPDNTTVFYDPRRATLAAVLHFLTALMLYGYL 371
Query: 181 IPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTL 240
IPISLY+SIE+VKVLQS+FINHD++MY+E+TD+PARARTSNLNEELGQVDTILSDKTGTL
Sbjct: 372 IPISLYVSIELVKVLQSIFINHDQEMYFEETDRPARARTSNLNEELGQVDTILSDKTGTL 431
Query: 241 TCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSV 300
TCNSMEFVKCS+ G+ YGR MTEVE+ L +R + EVD +D G + + V+S S+
Sbjct: 432 TCNSMEFVKCSIGGIPYGRGMTEVEKALVRRGSDVESEVDGGSSDILGQSNDAVDSRHSI 491
Query: 301 KGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAF 360
KGFNF+DERIM GQWVNEP+ D IQ+FFRVLAICHTAIPDV++E+ EISYEAESPDEAAF
Sbjct: 492 KGFNFKDERIMMGQWVNEPYPDFIQRFFRVLAICHTAIPDVDKESREISYEAESPDEAAF 551
Query: 361 VIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPEN 420
VIAARE+GF+FF +QTSISLHEL+ SG+KV+RVY LLHV EF+SSRKRMSV+VRN EN
Sbjct: 552 VIAARELGFEFFARTQTSISLHELNYESGKKVDRVYRLLHVFEFSSSRKRMSVIVRNEEN 611
Query: 421 QLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEK 480
QLLLLCKGADSVMFER+S+HG+QFEAETR HI Y+EAGLRTLVIAYREL E+EY++W+
Sbjct: 612 QLLLLCKGADSVMFERISQHGRQFEAETRDHIKSYSEAGLRTLVIAYRELDEEEYKLWDN 671
Query: 481 EFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWV 540
EF K KT+VT DR+ LV +AA+K+ERDLILLGATAVED+LQKGVPECI+KLA+A IK+WV
Sbjct: 672 EFSKIKTTVTEDRDVLVDAAADKMERDLILLGATAVEDRLQKGVPECIEKLARAKIKLWV 731
Query: 541 LTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIR 600
LTGDKMETA+NIGYACSLLRQ+MKQIVITLDSPD+ +LEKQGDKE ++K SLES+ KQIR
Sbjct: 732 LTGDKMETAVNIGYACSLLRQDMKQIVITLDSPDILSLEKQGDKEALSKASLESIKKQIR 791
Query: 601 EGISQVNSAKESKVT-------FGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSS 653
EGISQ+ SAKES T FGL+IDGKSLD++L+K LE+ F +LAI+CASVICCRSS
Sbjct: 792 EGISQIKSAKESSNTNKGSSSGFGLIIDGKSLDYSLNKNLERSFFELAINCASVICCRSS 851
Query: 654 PKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 712
PKQKA VT+LVK GTGKTTL+IGDGANDVGMLQEADIGVGISG EGMQAVM+SD+AIAQF
Sbjct: 852 PKQKARVTKLVKLGTGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAIAQF 911
Query: 713 RFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYN 772
RFLERLLLVHGHWCYRRISMMICYFFYKN+ FGFTLFW+EAYASFSG+ AYNDWYMS YN
Sbjct: 912 RFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQAAYNDWYMSFYN 971
Query: 773 VFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFF 832
VFFTSLPVIALGVFDQDVSA+LCLKYP LY EGV++ILFSWPRILGWM NGVLS+++IFF
Sbjct: 972 VFFTSLPVIALGVFDQDVSAKLCLKYPYLYLEGVEDILFSWPRILGWMLNGVLSSLVIFF 1031
Query: 833 FTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIAL 892
TTNS+ NQAFR+DG VD+E+LGV MY+ VVW VNCQMALSINYFTWIQHFFIWGSIA
Sbjct: 1032 LTTNSVLNQAFRRDGKVVDFEILGVTMYTCVVWTVNCQMALSINYFTWIQHFFIWGSIAF 1091
Query: 893 WYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRP 952
WY+F++VYG L P STTAY+V VEACAPS LYWL TLLVVV LLPYF YR+FQ+RF P
Sbjct: 1092 WYVFVLVYGYLSPAISTTAYRVFVEACAPSGLYWLVTLLVVVCVLLPYFSYRSFQSRFLP 1151
Query: 953 MYHDLIQRQRLEGSETEISSQTEVSSELPAQVEIKMQHLKANLRQR 998
MYHD+IQR+++EG E +S ELP QV+ K+ HL+ L+QR
Sbjct: 1152 MYHDIIQRKQVEGHEVGLSDD-----ELPKQVQGKLLHLRERLKQR 1192
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334185669|ref|NP_189425.2| phospholipid-translocating ATPase [Arabidopsis thaliana] gi|12229655|sp|Q9LK90.1|ALA8_ARATH RecName: Full=Putative phospholipid-transporting ATPase 8; Short=AtALA8; AltName: Full=Aminophospholipid flippase 8 gi|11994492|dbj|BAB02533.1| P-type transporting ATPase-like protein [Arabidopsis thaliana] gi|332643853|gb|AEE77374.1| phospholipid-translocating ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1615 bits (4181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 769/1008 (76%), Positives = 883/1008 (87%), Gaps = 22/1008 (2%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
MNLDGETNLKLK +LE T+ DEES + F +IKCEDPNE LYSFVGTL +EGKQYPLS
Sbjct: 192 MNLDGETNLKLKHALEITS---DEESIKNFRGMIKCEDPNEHLYSFVGTLYFEGKQYPLS 248
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLI 120
PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIE+KMD+I+Y+LFS LI
Sbjct: 249 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIEKKMDQIIYILFSILI 308
Query: 121 LISSTGSVFFGIETKRDI-DGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGY 179
+I+ TGSVFFGI T+RD+ D GK+RRWYL+PD TVFYDPRRA AAF HFLT LMLYGY
Sbjct: 309 VIAFTGSVFFGIATRRDMSDNGKLRRWYLRPDHTTVFYDPRRAVAAAFFHFLTALMLYGY 368
Query: 180 LIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGT 239
LIPISLY+SIE+VKVLQS+FIN D++MY+E+TD+PARARTSNLNEELGQVDTILSDKTGT
Sbjct: 369 LIPISLYVSIEVVKVLQSIFINQDQEMYHEETDRPARARTSNLNEELGQVDTILSDKTGT 428
Query: 240 LTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFE-VDDSQTDAPGLNGNIVESGK 298
LTCNSMEFVKCS+AG AYGR MTEVE L K+KG T E V D+++ + ++ K
Sbjct: 429 LTCNSMEFVKCSIAGTAYGRGMTEVEVALRKQKGLMTQEEVGDNESLS-------IKEQK 481
Query: 299 SVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEA 358
+VKGFNF DERI++GQW+N+P++++IQKFFRVLAICHTAIPDVN +TGEI+YEAESPDEA
Sbjct: 482 AVKGFNFWDERIVDGQWINQPNAELIQKFFRVLAICHTAIPDVNSDTGEITYEAESPDEA 541
Query: 359 AFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNP 418
AFVIA+RE+GF+FF SQTSISLHE+D ++G+KV+RVYELLHVLEF+SSRKRMSV+VRNP
Sbjct: 542 AFVIASRELGFEFFSRSQTSISLHEIDHMTGEKVDRVYELLHVLEFSSSRKRMSVIVRNP 601
Query: 419 ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIW 478
EN+LLLL KGADSVMF+RL+KHG+Q E ET+ HI +YAEAGLRTLVI YRE+ EDEY +W
Sbjct: 602 ENRLLLLSKGADSVMFKRLAKHGRQNERETKEHIKKYAEAGLRTLVITYREIDEDEYIVW 661
Query: 479 EKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKV 538
E+EFL AKT VT DR+AL+ +AA+KIE+DLILLG+TAVEDKLQKGVP+CI+KL+QAG+K+
Sbjct: 662 EEEFLNAKTLVTEDRDALIDAAADKIEKDLILLGSTAVEDKLQKGVPDCIEKLSQAGVKI 721
Query: 539 WVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598
WVLTGDK ETAINIGYACSLLR+ MKQI++TLDS D+EALEKQGDKE + K S +S+ KQ
Sbjct: 722 WVLTGDKTETAINIGYACSLLREGMKQILVTLDSSDIEALEKQGDKEAVAKASFQSIKKQ 781
Query: 599 IREGISQV-----NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSS 653
+REG+SQ NSAKE+ FGLVIDGKSL +ALD KLEK FL+LAI C SVICCRSS
Sbjct: 782 LREGMSQTAAVTDNSAKENSEMFGLVIDGKSLTYALDSKLEKEFLELAIRCNSVICCRSS 841
Query: 654 PKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 712
PKQKALVTRLVK GTG+TTLAIGDGANDVGMLQEADIGVGISG EGMQAVM+SD+AIAQF
Sbjct: 842 PKQKALVTRLVKNGTGRTTLAIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAIAQF 901
Query: 713 RFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYN 772
RFLERLLLVHGHWCYRRI++MICYFFYKNL FGFTLFWYEAYASFSG+PAYNDWYMSCYN
Sbjct: 902 RFLERLLLVHGHWCYRRITLMICYFFYKNLAFGFTLFWYEAYASFSGKPAYNDWYMSCYN 961
Query: 773 VFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFF 832
VFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQN+LFSW RILGWM NGV+S++IIFF
Sbjct: 962 VFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNVLFSWERILGWMLNGVISSMIIFF 1021
Query: 833 FTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIAL 892
T N++ QAFRKDG VDY VLGV MYSSVVW VNCQMA+SINYFTWIQH FIWGSI +
Sbjct: 1022 LTINTMATQAFRKDGQVVDYSVLGVTMYSSVVWTVNCQMAISINYFTWIQHCFIWGSIGV 1081
Query: 893 WYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRP 952
WY+FLV+YGSLPPTFSTTA++V VE APS +YWL LVV S LLPYF YRAFQ +FRP
Sbjct: 1082 WYLFLVIYGSLPPTFSTTAFQVFVETSAPSPIYWLVLFLVVFSALLPYFTYRAFQIKFRP 1141
Query: 953 MYHDLI-QRQRLEGSETEISSQTEVSSELPAQVEIKMQHLKANLRQRN 999
MYHD+I +++R E +ET + V ELP QVE + HL+ANL +R+
Sbjct: 1142 MYHDIIVEQRRTERTET---APNAVLGELPVQVEFTLHHLRANLSRRD 1186
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|270342132|gb|ACZ74715.1| E1-E2 type truncated ATPase [Phaseolus vulgaris] | Back alignment and taxonomy information |
|---|
Score = 1613 bits (4176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 772/1007 (76%), Positives = 881/1007 (87%), Gaps = 14/1007 (1%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
MNLDGETNLKLK +LE T HL DE+S QKF AV+KCEDPNE LYSF+GTLQ++GK+YPLS
Sbjct: 110 MNLDGETNLKLKHALEVTTHLHDEKSLQKFRAVVKCEDPNENLYSFIGTLQHDGKEYPLS 169
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLI 120
QQILLRDSKLKNTD++YG+VVFTGHDTKVMQN+TDPPSKRSKIERKMDKI+Y+LFSTL+
Sbjct: 170 LQQILLRDSKLKNTDFIYGIVVFTGHDTKVMQNSTDPPSKRSKIERKMDKIIYILFSTLV 229
Query: 121 LISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 180
LIS GSVFFGIETK+DI GG+ RRWYL+PDDATVFYDPRRA LAA LHFLT +MLYGYL
Sbjct: 230 LISFIGSVFFGIETKKDISGGRYRRWYLRPDDATVFYDPRRATLAAILHFLTAIMLYGYL 289
Query: 181 IPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTL 240
IPISLY+SIEIVKVLQS+FIN D++MYYE++D+PA ARTSNLNEELGQVDTILSDKTGTL
Sbjct: 290 IPISLYVSIEIVKVLQSIFINQDQEMYYEESDRPAHARTSNLNEELGQVDTILSDKTGTL 349
Query: 241 TCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSV 300
TCNSMEFVKCS+ G+ YGR MTEVE+ LA+R +VD +D G N +S +
Sbjct: 350 TCNSMEFVKCSIGGIPYGRGMTEVEKALARRGKGGESDVDGGSSDFLGQNNEASDSLHPI 409
Query: 301 KGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAF 360
KGFNFRDERI+NGQWVNEP SD IQKFF VLAICHTAIPD ++E+GEISYEAESPDEAAF
Sbjct: 410 KGFNFRDERIVNGQWVNEPCSDFIQKFFLVLAICHTAIPDEDKESGEISYEAESPDEAAF 469
Query: 361 VIAAREVGFQFFGSSQTSISLHELDPVSGQKVN-RVYELLHVLEFTSSRKRMSVMVRNPE 419
VIAARE+GF+FF QTSISLHEL+ SG+KV+ RVY+LLHVLEF+SSRKRMSV+VRN E
Sbjct: 470 VIAARELGFEFFERKQTSISLHELNYESGKKVDSRVYQLLHVLEFSSSRKRMSVIVRNEE 529
Query: 420 NQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWE 479
NQLLLLCKGADSVMFERLS+HG+QFE ETR HI RYAEAGLRTLV+ YREL E+EY++W+
Sbjct: 530 NQLLLLCKGADSVMFERLSQHGRQFEVETRDHIKRYAEAGLRTLVVTYRELDEEEYKLWD 589
Query: 480 KEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVW 539
KEF K K+SVT DR+ LV +AA+K+ERDLILLGATAVED+LQKGVPECI+KLA+A IK+W
Sbjct: 590 KEFSKVKSSVTEDRDELVDAAADKMERDLILLGATAVEDRLQKGVPECIEKLARAKIKLW 649
Query: 540 VLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQI 599
VLTGDKMETA+NIGYACSLLRQ+MKQIVITLDS D+ LEKQGDK+ + K SLES+ KQI
Sbjct: 650 VLTGDKMETAVNIGYACSLLRQDMKQIVITLDSSDILYLEKQGDKQALAKASLESIKKQI 709
Query: 600 REGISQVNSAKESKVT-------FGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRS 652
EGISQ+NSAKES FGL+IDGKSLD++L+K LEK F +LAI+CASVICCRS
Sbjct: 710 GEGISQINSAKESSNANKGTSSGFGLIIDGKSLDYSLNKNLEKSFFELAINCASVICCRS 769
Query: 653 SPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711
SPKQKA VTRLVK GTGKTTL+IGDGANDVGMLQEADIGVGISG EGMQA+M+SD+AIAQ
Sbjct: 770 SPKQKARVTRLVKLGTGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAIMASDFAIAQ 829
Query: 712 FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCY 771
FRFLERLLLVHGHWCYRRISMMICYFFYKN+ FGFTLFW+EAYASFSG+ AYNDWYMS Y
Sbjct: 830 FRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQAAYNDWYMSFY 889
Query: 772 NVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIF 831
NVFFTSLPVIALGVFDQDVSA+LCLKYP+LY EGV++ LFSWPRILGWM NGVLS+++IF
Sbjct: 890 NVFFTSLPVIALGVFDQDVSAKLCLKYPVLYLEGVEDTLFSWPRILGWMLNGVLSSLVIF 949
Query: 832 FFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIA 891
F TTNS+ NQAFR+DG VD+E+LGV MY+ VVW VNCQMALSINYFTWIQHFFIWGSIA
Sbjct: 950 FLTTNSVLNQAFRRDGKVVDFEILGVTMYTCVVWTVNCQMALSINYFTWIQHFFIWGSIA 1009
Query: 892 LWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFR 951
WY+F++VYG L P STTAY+V VEACAPS LYWL TLLVVV LLPYF YR+FQ+RF
Sbjct: 1010 FWYVFVLVYGYLSPAISTTAYRVFVEACAPSGLYWLVTLLVVVCVLLPYFSYRSFQSRFL 1069
Query: 952 PMYHDLIQRQRLEGSETEISSQTEVSSELPAQVEIKMQHLKANLRQR 998
PMYHD+IQR+++EG E +S ELP +V+ K+ HL+ L+QR
Sbjct: 1070 PMYHDIIQREQVEGIEIGLS-----DDELPKKVQGKLIHLRERLKQR 1111
|
Source: Phaseolus vulgaris Species: Phaseolus vulgaris Genus: Phaseolus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357495971|ref|XP_003618274.1| ATPase [Medicago truncatula] gi|355493289|gb|AES74492.1| ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1593 bits (4126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 746/1006 (74%), Positives = 874/1006 (86%), Gaps = 14/1006 (1%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
MNLDGETNLKLK++LEAT L DE+S Q+F A++KCEDPNE LYSF+GT +YEG+++PLS
Sbjct: 192 MNLDGETNLKLKQALEATTRLNDEKSLQRFRAMVKCEDPNENLYSFIGTFEYEGEEHPLS 251
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLI 120
QQILLRDSKL+NT+Y+ GVV+FTGHDTKVMQN+ DPPSKRSKIERKMDKI+Y+LFSTL+
Sbjct: 252 LQQILLRDSKLRNTEYICGVVIFTGHDTKVMQNSVDPPSKRSKIERKMDKIIYILFSTLV 311
Query: 121 LISSTGSVFFGIETKRDIDG-GKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGY 179
LIS GS+FFG++T+ DI+ G RRWYL PD+ TV+YDP+RA LA+ LHFLT LMLYGY
Sbjct: 312 LISFIGSMFFGVDTENDINNDGSYRRWYLHPDETTVYYDPKRAGLASILHFLTALMLYGY 371
Query: 180 LIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGT 239
LIPISLY+SIEIVKVLQ++FIN D++MYYE++D+PA ARTSNLNEELGQVDTILSDKTGT
Sbjct: 372 LIPISLYVSIEIVKVLQTIFINQDQEMYYEESDRPAHARTSNLNEELGQVDTILSDKTGT 431
Query: 240 LTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKS 299
LTCNSMEFVKCS+ GV YGR +TEVE+ LA+R E D +D + ++V+S K+
Sbjct: 432 LTCNSMEFVKCSIGGVQYGRGITEVEKALARRAKNGESEGDAYSSDFVNESSDVVDSQKT 491
Query: 300 VKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAA 359
VKGFNF+DERIMNGQW+NEPH D+I+KFFRVLAICHTAIPDV++ +GEISYEAESPDEAA
Sbjct: 492 VKGFNFKDERIMNGQWINEPHPDIIEKFFRVLAICHTAIPDVDKSSGEISYEAESPDEAA 551
Query: 360 FVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPE 419
FVIAARE+GF+FF +QTSISLHEL+ SG+KV+RVY+LLHVLEF+SSRKRMSV+VRN E
Sbjct: 552 FVIAARELGFEFFVRTQTSISLHELNHESGKKVDRVYQLLHVLEFSSSRKRMSVIVRNEE 611
Query: 420 NQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWE 479
N++LLLCKGADSVMFERLS++G++FEAET HI RY+EAGLRTLVI YRELGE+EY+ WE
Sbjct: 612 NKILLLCKGADSVMFERLSQYGREFEAETNNHIKRYSEAGLRTLVITYRELGEEEYKQWE 671
Query: 480 KEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVW 539
KEF KAKTS+ +DR+ALV +AA+K+ERDLILLGATAVED+LQKGVPECI+KLA+AGIK+W
Sbjct: 672 KEFSKAKTSLAADRDALVDAAADKMERDLILLGATAVEDRLQKGVPECIEKLAKAGIKLW 731
Query: 540 VLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQI 599
VLTGDKMETA+NIGYACSLLRQ+MKQIVITLDS D+ ++EKQGDKE + K S ES+ KQI
Sbjct: 732 VLTGDKMETAVNIGYACSLLRQDMKQIVITLDSSDIISIEKQGDKEALAKASRESIEKQI 791
Query: 600 REGISQVNSAKESKVT------FGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSS 653
EGI Q+ S KES T L+IDG+SL+++L+ LEK F LA +CASVICCRSS
Sbjct: 792 NEGILQIESTKESSDTAKEISSLALIIDGRSLEYSLNNALEKPFFKLASNCASVICCRSS 851
Query: 654 PKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 712
PKQKA VT+LVK TGKTTL+IGDGANDVGMLQEADIGVGISG EGMQAVM+SDY+I QF
Sbjct: 852 PKQKARVTKLVKLETGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDYSIGQF 911
Query: 713 RFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYN 772
RFLERLLLVHGHWCYRRISMMICYFFYKN+ FGFTLFW+EAYASFSG+ AYNDWYMSCYN
Sbjct: 912 RFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQAAYNDWYMSCYN 971
Query: 773 VFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFF 832
VFFTSLPVIALGVFDQDVSARLC K+P LY EGV+N LFSW RI+GWM NG LS+++IFF
Sbjct: 972 VFFTSLPVIALGVFDQDVSARLCQKHPFLYLEGVENTLFSWTRIIGWMLNGFLSSLLIFF 1031
Query: 833 FTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIAL 892
TTNS+ NQAFRKDG VD+E+LGV MY+ +W VNCQMALSINYFTWIQHFFIWGSI L
Sbjct: 1032 LTTNSVLNQAFRKDGQVVDFEILGVIMYTCAIWVVNCQMALSINYFTWIQHFFIWGSIVL 1091
Query: 893 WYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRP 952
WY+FLVVYG + PT STTAY+V VEACAPS+LYWL TL +VV LLPYF YRAFQ+RF P
Sbjct: 1092 WYVFLVVYGYISPTISTTAYRVFVEACAPSLLYWLVTLFIVVCVLLPYFSYRAFQSRFLP 1151
Query: 953 MYHDLIQRQRLEGSETEISSQTEVSSELPAQVEIKMQHLKANLRQR 998
MYHD+IQR+++EGSE EI S ELP QV+ K+ HL+ L+QR
Sbjct: 1152 MYHDIIQRKQVEGSEFEI------SDELPRQVQGKLIHLRERLKQR 1191
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297815050|ref|XP_002875408.1| hypothetical protein ARALYDRAFT_484577 [Arabidopsis lyrata subsp. lyrata] gi|297321246|gb|EFH51667.1| hypothetical protein ARALYDRAFT_484577 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1576 bits (4081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 763/1009 (75%), Positives = 868/1009 (86%), Gaps = 40/1009 (3%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
MNLDGETNLKLK +LE T+ DEES + F AVIKCEDPNE LYSFVGTL +EGKQYPLS
Sbjct: 192 MNLDGETNLKLKHALEITS---DEESIKNFRAVIKCEDPNEHLYSFVGTLYFEGKQYPLS 248
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLI 120
PQQILLRDSKLKNTDYV+GVVVFTGHDTKVMQNATDPPSKRSKIE+KMD+I+Y+LFS LI
Sbjct: 249 PQQILLRDSKLKNTDYVHGVVVFTGHDTKVMQNATDPPSKRSKIEKKMDQIIYILFSILI 308
Query: 121 LISSTGSVFFGIETKRDI-DGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGY 179
+I+ TGSVFFGI T+RD+ D GK+RRWYL+PD TVFYDPRRA AAF HFLT LMLYGY
Sbjct: 309 VIAFTGSVFFGIVTRRDMSDDGKLRRWYLRPDQTTVFYDPRRAVAAAFFHFLTALMLYGY 368
Query: 180 LIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGT 239
LIPISLY+SIE+VKVLQS+FIN D++MY+E+TD+PARARTSNLNEELGQVDTILSDKTGT
Sbjct: 369 LIPISLYVSIEVVKVLQSIFINQDQEMYHEETDRPARARTSNLNEELGQVDTILSDKTGT 428
Query: 240 LTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEV--DDSQTDAPGLNGNIVESG 297
LTCNSMEFVKCS+AG AYGR MTEVE L K+KG E DDS + ++
Sbjct: 429 LTCNSMEFVKCSIAGTAYGRGMTEVEMALRKKKGMVPQEEVGDDSLS---------IKEQ 479
Query: 298 KSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDE 357
KSVKGFNF DERI++GQW+N+P++++IQKFFRVLAICHTAIPDVN +TGEI+YEAESPDE
Sbjct: 480 KSVKGFNFWDERIVDGQWINQPNAELIQKFFRVLAICHTAIPDVNNDTGEITYEAESPDE 539
Query: 358 AAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRN 417
AAFVIA+RE+GF+FF SQTSISLHE+D ++ VYELLHVLEF+SSRKRMSV+VRN
Sbjct: 540 AAFVIASRELGFEFFSRSQTSISLHEIDHMT------VYELLHVLEFSSSRKRMSVIVRN 593
Query: 418 PENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRI 477
PEN+LLLL KGADSVMFERL+KHG+Q E ET+ HI +YAEAGLRTLVI YRE+ EDEYR+
Sbjct: 594 PENRLLLLSKGADSVMFERLAKHGRQNERETKEHIKKYAEAGLRTLVITYREIDEDEYRV 653
Query: 478 WEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIK 537
WE+EFL AKT VT DR+ L+ +AA+KIE+DLILLG+TAVEDKLQKGVP+CI+KL+QAG+K
Sbjct: 654 WEEEFLNAKTLVTEDRDTLIDAAADKIEKDLILLGSTAVEDKLQKGVPDCIEKLSQAGVK 713
Query: 538 VWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597
+WVLTGDK ETAINIGYACSLLR+ MK+I+ITLDS D+EALEKQGDKE + K
Sbjct: 714 IWVLTGDKTETAINIGYACSLLREGMKKILITLDSSDIEALEKQGDKEAVAK-------- 765
Query: 598 QIREGISQV-----NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRS 652
+REG++Q +S KE+ FGLVIDGKSL FALD KLEK FL+LAI C SVICCRS
Sbjct: 766 -LREGMTQTAAVTDDSVKENPEMFGLVIDGKSLTFALDSKLEKEFLELAIRCNSVICCRS 824
Query: 653 SPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711
SPKQKALVTRLVK GTG+TTLAIGDGANDVGMLQEADIGVGISG EGMQAVM+SD+AIAQ
Sbjct: 825 SPKQKALVTRLVKNGTGRTTLAIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAIAQ 884
Query: 712 FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCY 771
FRFLERLLLVHGHWCYRRI++MICYFFYKNLTFGFTLFWYEAYASFSG+PAYNDWYMSCY
Sbjct: 885 FRFLERLLLVHGHWCYRRIALMICYFFYKNLTFGFTLFWYEAYASFSGKPAYNDWYMSCY 944
Query: 772 NVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIF 831
NVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQN+LFSW RILGWM NG++S++IIF
Sbjct: 945 NVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNVLFSWERILGWMLNGIISSMIIF 1004
Query: 832 FFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIA 891
F T N++ QAFRKDG VDY VLGV MYSSVVW VNCQMA+SINYFTWIQH FIWGSI
Sbjct: 1005 FLTINTMAAQAFRKDGQVVDYSVLGVTMYSSVVWMVNCQMAISINYFTWIQHCFIWGSIG 1064
Query: 892 LWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFR 951
+WY+FLVVYGSLPPTFSTTA++V VE APS + WL LVV S LLPYF YRAFQ +FR
Sbjct: 1065 VWYLFLVVYGSLPPTFSTTAFQVFVETSAPSPICWLILFLVVFSALLPYFAYRAFQIKFR 1124
Query: 952 PMYHDLI-QRQRLEGSETEISSQTEVSSELPAQVEIKMQHLKANLRQRN 999
PMYHD+I +++R E ET S+ V ELP QVE + HL+ANL +R+
Sbjct: 1125 PMYHDIIVEQRRTERIETAPSA---VLGELPVQVEFTLHHLRANLSRRD 1170
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224055525|ref|XP_002298522.1| aminophospholipid ATPase [Populus trichocarpa] gi|222845780|gb|EEE83327.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1524 bits (3947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 715/958 (74%), Positives = 837/958 (87%), Gaps = 15/958 (1%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
MNLDGET+LKLK +LE T+ LR+EES +KF A+IKCEDPNE+LYSFVGTL Y G YPL
Sbjct: 190 MNLDGETDLKLKHALEVTSSLREEESLKKFMAMIKCEDPNEKLYSFVGTLYYNGYDYPLL 249
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPP-SKRSKIERKMDKIVYLLFSTL 119
P+QILLRDSKL+NT+++YGVV+FTGHDTKVMQNA DPP SKRSKIER+MDKIVYLLFS L
Sbjct: 250 PRQILLRDSKLRNTEFIYGVVIFTGHDTKVMQNAVDPPPSKRSKIERRMDKIVYLLFSML 309
Query: 120 ILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGY 179
+LIS GS+FFGIET +D GG+ RRWYL+PDD TVF+DP+RAP++AF HFLTGLMLYGY
Sbjct: 310 VLISFIGSIFFGIETTKDFRGGRFRRWYLRPDDTTVFFDPKRAPISAFFHFLTGLMLYGY 369
Query: 180 LIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGT 239
LIPISLY+SIEIVKVLQS+FIN D+DMYY++T+KPA+ARTSNLNEELGQV+ I+SDKTGT
Sbjct: 370 LIPISLYVSIEIVKVLQSIFINQDQDMYYKETNKPAQARTSNLNEELGQVEYIMSDKTGT 429
Query: 240 LTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKS 299
LTCNSMEFVKCS+AGVAYG MTEVER +A+ G+ E DD++ SG S
Sbjct: 430 LTCNSMEFVKCSIAGVAYGYGMTEVERAVARIAGDGPLEADDTRN-----------SGNS 478
Query: 300 VKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAA 359
+KGFNFRDERIMNG+WVNEPHSDVIQKFFR+LA+C+TA+P+ N+ETGEISYEAESPDEAA
Sbjct: 479 IKGFNFRDERIMNGKWVNEPHSDVIQKFFRILAVCNTAVPERNKETGEISYEAESPDEAA 538
Query: 360 FVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPE 419
FVIAARE+GF+ F Q+SISLHEL V+G+KV RVY++L +LEF+S RKRMS +VR E
Sbjct: 539 FVIAAREIGFELFKRKQSSISLHEL--VNGEKVTRVYQILQILEFSSYRKRMSAIVRTME 596
Query: 420 NQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWE 479
N++LLLCKGADSV+FERLS G+ FEA+T+ H+ ++AEAGLRT+++AYRELGE E++ W
Sbjct: 597 NKILLLCKGADSVIFERLSYEGRLFEAKTKEHVKKFAEAGLRTMLLAYRELGEGEHKEWA 656
Query: 480 KEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVW 539
EF AK +VT+ R+ L+ A+KIERDLILLGATA+EDKLQKGVPECIDKLA+A IK+W
Sbjct: 657 AEFSNAKANVTAYRDVLMDEIADKIERDLILLGATAIEDKLQKGVPECIDKLAKATIKIW 716
Query: 540 VLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQI 599
VLTGDKMETAINIGYACSLLR+ MK I+ITLD P+++ALE+QGD E I+K S +SV KQ+
Sbjct: 717 VLTGDKMETAINIGYACSLLREGMKLIIITLDLPEIKALERQGDMEAISKASFQSVQKQL 776
Query: 600 REGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKAL 659
+G QV+SAKE + FGLV++GKSL FALD KLEK FL+LA+ CASV+CCRS+PKQKAL
Sbjct: 777 EDGKIQVDSAKEGRNEFGLVVEGKSLAFALDNKLEKNFLNLALACASVLCCRSTPKQKAL 836
Query: 660 VTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERL 718
VTRLVK + KTTLAIGDG NDV MLQEADIGVGISGVEGM+AVMSSD+AIAQF FLERL
Sbjct: 837 VTRLVKMDSSKTTLAIGDGGNDVSMLQEADIGVGISGVEGMEAVMSSDFAIAQFCFLERL 896
Query: 719 LLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSL 778
LLVHGHWCYRRI+MM+CYFFYKN+TFGFTLFW+EAYASFSG+PAYNDWYMS YNVFFTSL
Sbjct: 897 LLVHGHWCYRRIAMMVCYFFYKNITFGFTLFWFEAYASFSGQPAYNDWYMSFYNVFFTSL 956
Query: 779 PVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSI 838
PVIALGVFDQDVSARLCLKYPLLY+EG++NILFSWP IL WM NGVL++IIIFFFT NS+
Sbjct: 957 PVIALGVFDQDVSARLCLKYPLLYREGIKNILFSWPHILLWMCNGVLTSIIIFFFTINSM 1016
Query: 839 FNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYIFLV 898
NQAFR+DG VDYE+LG MY+ VVWAVNCQ+ALSI+YFTWIQHFFIWGSIA WYIF+V
Sbjct: 1017 INQAFRRDGQVVDYEILGATMYTCVVWAVNCQIALSIHYFTWIQHFFIWGSIAFWYIFMV 1076
Query: 899 VYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMYHD 956
+YG LPP STTA+KV VEACAPSILYWL TLLVV+STLLPYF YRAFQ+RF P+ +
Sbjct: 1077 IYGFLPPGVSTTAHKVFVEACAPSILYWLVTLLVVISTLLPYFSYRAFQSRFLPIVRE 1134
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147821807|emb|CAN61664.1| hypothetical protein VITISV_037830 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1491 bits (3860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 743/997 (74%), Positives = 825/997 (82%), Gaps = 78/997 (7%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
MNLDGETNLKLK +LE T+ LRDE+SFQ+F AVIKCEDPNE LYSFVGTL Y G + LS
Sbjct: 191 MNLDGETNLKLKHALEETSSLRDEKSFQQFKAVIKCEDPNEDLYSFVGTLSYNGTPHELS 250
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLI 120
QQILLRDSKL+NTD +YGVV+FTGHDTKVMQNATDPPSKRSKIER+MDKIVY+LFSTL+
Sbjct: 251 LQQILLRDSKLRNTDCIYGVVIFTGHDTKVMQNATDPPSKRSKIERRMDKIVYILFSTLV 310
Query: 121 LISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 180
LIS GSVFFG ET++DI GGK RRWYL+PDD TVFYDP+R LAAFLHFLTGLMLYGYL
Sbjct: 311 LISFIGSVFFGTETRKDISGGKYRRWYLRPDDTTVFYDPQRPVLAAFLHFLTGLMLYGYL 370
Query: 181 IPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTL 240
IPISLY+SIEIVKVLQS+FIN D+DMYYE+TDKPA ARTSNLNEELGQ+DTILSDKTGTL
Sbjct: 371 IPISLYVSIEIVKVLQSIFINQDQDMYYEETDKPAHARTSNLNEELGQIDTILSDKTGTL 430
Query: 241 TCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSV 300
TCNSMEFVKCS+AG AYGR MTEVER LA+R +R EV D+ +D G +G I GK +
Sbjct: 431 TCNSMEFVKCSIAGTAYGRGMTEVERALARRN-DRPHEVGDASSDLLGDSGEI-NLGKPI 488
Query: 301 KGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAF 360
KGFNFRDERIM+G+WVNEPH+DVIQ+FFRVLAICHTAIPD+NE GEISYEAESPDEAAF
Sbjct: 489 KGFNFRDERIMHGRWVNEPHADVIQRFFRVLAICHTAIPDINE--GEISYEAESPDEAAF 546
Query: 361 VIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPEN 420
VIAARE+GF+FF QT ISLHELD SG +V+R Y+LLHVLEF SSRKRMSV+VRNPEN
Sbjct: 547 VIAARELGFEFFSRKQTCISLHELDHKSGGEVDRTYKLLHVLEFKSSRKRMSVIVRNPEN 606
Query: 421 QLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEK 480
QLLLL KGAD RLSK G+ FEA+TR HI +YAEAGLRTLV+AYR+L E+EY WE+
Sbjct: 607 QLLLLSKGAD-----RLSKEGRMFEAQTRDHIRKYAEAGLRTLVLAYRDLDEEEYEAWEE 661
Query: 481 EFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWV 540
EF +AKTSV +D +ALV +A +KIERDLILLGATAVEDKLQKGVPECID+LAQAGIK+WV
Sbjct: 662 EFSRAKTSVXADHDALVDAACDKIERDLILLGATAVEDKLQKGVPECIDRLAQAGIKIWV 721
Query: 541 LTGDKMETAINIG------------YACSLLRQEMKQIVITLDSPDMEALEKQGDKENIT 588
LTGDKMETAINIG YACSLLRQ MKQ+VITLDS D++ L KQGDKE I
Sbjct: 722 LTGDKMETAINIGKLQVVTIVIPNRYACSLLRQGMKQVVITLDSQDIDVLRKQGDKEAIA 781
Query: 589 KVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI 648
K S ES+ KQIREG SQ+ SAKE+ V+ L+IDG+SL FAL+K LEK FL+LAIDCASVI
Sbjct: 782 KASCESIRKQIREGKSQLXSAKENSVSXALIIDGESLSFALNKNLEKSFLELAIDCASVI 841
Query: 649 CCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDY 707
CCRSSPKQKALVTRLVK GTG+TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD+
Sbjct: 842 CCRSSPKQKALVTRLVKMGTGETTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDF 901
Query: 708 AIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWY 767
AIAQFRFLERLLLVHGHWCYRRISMMICYFFYKN+ FGFTLFW+EAYASFSG+PAYNDWY
Sbjct: 902 AIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQPAYNDWY 961
Query: 768 MSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSA 827
MS YNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGV+ +
Sbjct: 962 MSFYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVIGS 1021
Query: 828 IIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIW 887
IIIFFFTT SI QAFR+DG D+EVLG MY+SVVWAVNCQ+ALSINYFTWIQHFFIW
Sbjct: 1022 IIIFFFTTKSIIPQAFRRDGQVTDFEVLGATMYTSVVWAVNCQIALSINYFTWIQHFFIW 1081
Query: 888 GSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQ 947
GSI W AFQ
Sbjct: 1082 GSIIFW---------------------------------------------------AFQ 1090
Query: 948 TRFRPMYHDLIQRQRLEGSETEISSQTEVSSELPAQV 984
TRFRP+YHD+IQ++R EG ET+ + +ELP +V
Sbjct: 1091 TRFRPLYHDIIQQKRSEGLETD-----DTPNELPHRV 1122
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1000 | ||||||
| TAIR|locus:2026900 | 1200 | AT1G68710 [Arabidopsis thalian | 0.962 | 0.801 | 0.665 | 0.0 | |
| TAIR|locus:2102345 | 1202 | AT3G25610 [Arabidopsis thalian | 0.962 | 0.800 | 0.659 | 0.0 | |
| TAIR|locus:2031860 | 1203 | ACA.l "autoinhibited Ca2+/ATPa | 0.962 | 0.799 | 0.644 | 0.0 | |
| TAIR|locus:2007858 | 1216 | AT1G17500 [Arabidopsis thalian | 0.984 | 0.809 | 0.554 | 1.2e-301 | |
| TAIR|locus:2030180 | 1228 | AT1G72700 [Arabidopsis thalian | 0.987 | 0.803 | 0.539 | 1.2e-296 | |
| TAIR|locus:2088217 | 1243 | AT3G13900 [Arabidopsis thalian | 0.691 | 0.555 | 0.542 | 4.6e-295 | |
| TAIR|locus:2020038 | 1240 | AT1G54280 [Arabidopsis thalian | 0.737 | 0.594 | 0.518 | 7.6e-293 | |
| TAIR|locus:2025961 | 1213 | ALA3 "aminophospholipid ATPase | 0.812 | 0.669 | 0.444 | 9.7e-183 | |
| DICTYBASE|DDB_G0269380 | 1313 | DDB_G0269380 "P-type ATPase" [ | 0.563 | 0.428 | 0.404 | 1.3e-176 | |
| ASPGD|ASPL0000000502 | 1348 | AN6112 [Emericella nidulans (t | 0.602 | 0.446 | 0.431 | 2e-171 |
| TAIR|locus:2026900 AT1G68710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3407 (1204.4 bits), Expect = 0., P = 0.
Identities = 644/967 (66%), Positives = 773/967 (79%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
MNLDGETNLK+K+ LE T+ LRDE +F+ F A +KCEDPN LYSFVGT++ +G +YPLS
Sbjct: 196 MNLDGETNLKVKQGLEVTSSLRDEFNFKGFEAFVKCEDPNANLYSFVGTMELKGAKYPLS 255
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYXXXXXXX 120
PQQ+LLRDSKL+NTD+++G V+FTGHDTKV+QN+TDPPSKRS IE+KMDKI+Y
Sbjct: 256 PQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSMIEKKMDKIIYLMFFMVI 315
Query: 121 XXXXXXXVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 180
V FG+ T+ D+ G ++RWYL+PD +++F+DP+RAP+AA HFLT +MLY Y
Sbjct: 316 TMAFIGSVIFGVTTRDDLKDGVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLTAVMLYSYF 375
Query: 181 IPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTL 240
IPISLY+SIEIVKVLQS+FIN D MYYE+ DKPARARTSNLNEELGQVDTILSDKTGTL
Sbjct: 376 IPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTGTL 435
Query: 241 TCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKG-ERTFEVDDSQTDAPGLNGNIVESGKS 299
TCNSMEF+KCSVAG AYGR +TEVE + +RKG F+ D++ D I E +
Sbjct: 436 TCNSMEFIKCSVAGTAYGRGVTEVEMAMGRRKGGPLVFQSDENDIDMEYSKEAITEES-T 494
Query: 300 VKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAA 359
VKGFNFRDERIMNG WV E H+DVIQKFFR+LA+CHT IP+V+E+T +ISYEAESPDEAA
Sbjct: 495 VKGFNFRDERIMNGNWVTETHADVIQKFFRLLAVCHTVIPEVDEDTEKISYEAESPDEAA 554
Query: 360 FVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPE 419
FVIAARE+GF+FF +QT+IS+ ELD VSG++V R+Y++L+VLEF S+RKRMSV+V+ +
Sbjct: 555 FVIAARELGFEFFNRTQTTISVRELDLVSGKRVERLYKVLNVLEFNSTRKRMSVIVQEED 614
Query: 420 NQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWE 479
+LLLLCKGAD+VMFERLSK+G++FE ETR H+N YA+AGLRTL++AYREL E EY+++
Sbjct: 615 GKLLLLCKGADNVMFERLSKNGREFEEETRDHVNEYADAGLRTLILAYRELDEKEYKVFN 674
Query: 480 KEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVW 539
+ +AK+SV++DRE+L+ EKIE+DLILLGATAVEDKLQ GVP+CIDKLAQAGIK+W
Sbjct: 675 ERISEAKSSVSADRESLIEEVTEKIEKDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIW 734
Query: 540 VLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQI 599
VLTGDKMETAINIG+ACSLLRQ+MKQI+I L++P++++LEK G+K+ I K S E+V QI
Sbjct: 735 VLTGDKMETAINIGFACSLLRQDMKQIIINLETPEIQSLEKTGEKDVIAKASKENVLSQI 794
Query: 600 REGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKAL 659
G +Q+ + + F L+IDGKSL +ALD ++ +FL+LA+ CASVICCRSSPKQKAL
Sbjct: 795 INGKTQLKYSGGN--AFALIIDGKSLAYALDDDIKHIFLELAVSCASVICCRSSPKQKAL 852
Query: 660 VTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERL 718
VTRLVK G GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD AIAQFR+LERL
Sbjct: 853 VTRLVKSGNGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERL 912
Query: 719 LLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSL 778
LLVHGHWCYRRIS MICYFFYKN+TFGFTLF YE Y +FS PAYNDW++S YNVFF+SL
Sbjct: 913 LLVHGHWCYRRISTMICYFFYKNITFGFTLFLYETYTTFSSTPAYNDWFLSLYNVFFSSL 972
Query: 779 PVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAXXXXXXXXXXX 838
PVIALGVFDQDVSAR CLK+PLLYQEGVQN+LFSW RILGWM NG SA
Sbjct: 973 PVIALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILGWMFNGFYSAVIIFFLCKSSL 1032
Query: 839 XXQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYIFLV 898
QAF DG E+LG MY+ +VW VN QMAL+I+YFT IQH IW SI +WY F+
Sbjct: 1033 QSQAFNHDGKTPGREILGGTMYTCIVWVVNLQMALAISYFTLIQHIVIWSSIVVWYFFIT 1092
Query: 899 VYGSLPPTFSTTAYKVLVEACAPSILYWXXXXXXXXXXXXPYFLYRAFQTRFRPMYHDLI 958
VYG LP ST AYKV VEA APS+ YW PYF+Y A Q F PMYH +I
Sbjct: 1093 VYGELPSRISTGAYKVFVEALAPSLSYWLITLFVVVATLMPYFIYSALQMSFFPMYHGMI 1152
Query: 959 QRQRLEG 965
Q R EG
Sbjct: 1153 QWLRYEG 1159
|
|
| TAIR|locus:2102345 AT3G25610 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3358 (1187.1 bits), Expect = 0., P = 0.
Identities = 641/972 (65%), Positives = 767/972 (78%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEES-FQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPL 59
MNLDGETNLK+K+ LEAT+ L +++S F+ F V++CEDPN LY FVGTL E +++PL
Sbjct: 194 MNLDGETNLKVKQGLEATSSLLNQDSDFKDFRGVVRCEDPNVNLYVFVGTLALEEERFPL 253
Query: 60 SPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYXXXXXX 119
S QQILLRDSKL+NT+YVYG VVFTGHDTKV+QN+TDPPSKRS+IER MDKI+Y
Sbjct: 254 SIQQILLRDSKLRNTEYVYGAVVFTGHDTKVIQNSTDPPSKRSRIERTMDKIIYLMFGLV 313
Query: 120 XXXXXXXXVFFGIETKRD-IDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYG 178
+ FG+ET+ D + G+ RWYL+PDDA +F+DP RAP+AA HF T MLY
Sbjct: 314 FLMSFVGSIIFGVETREDKVKNGRTERWYLKPDDADIFFDPERAPMAAIYHFFTATMLYS 373
Query: 179 YLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTG 238
Y IPISLY+SIEIVKVLQS+FIN D MYYE+TDKPA+ARTSNLNEELG VDTILSDKTG
Sbjct: 374 YFIPISLYVSIEIVKVLQSIFINRDIHMYYEETDKPAQARTSNLNEELGMVDTILSDKTG 433
Query: 239 TLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGK 298
TLTCNSMEF+KCS+AG AYGR +TEVER +A R G +D L+ + +SG
Sbjct: 434 TLTCNSMEFIKCSIAGKAYGRGITEVERAMAVRSGGSPLVNED-------LDVVVDQSGP 486
Query: 299 SVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEA 358
VKGFNF DER+MNG WV +P + V+QKFFR+LA+CHTAIP+ +EE+G +SYEAESPDEA
Sbjct: 487 KVKGFNFEDERVMNGNWVRQPEAAVLQKFFRLLAVCHTAIPETDEESGNVSYEAESPDEA 546
Query: 359 AFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNP 418
AFV+AARE GF+FF +Q IS ELD VSG+KV RVY LL+VLEF S+RKRMSV+VR+
Sbjct: 547 AFVVAAREFGFEFFNRTQNGISFRELDLVSGEKVERVYRLLNVLEFNSTRKRMSVIVRDD 606
Query: 419 ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIW 478
+ +LLLL KGAD+VMFERL+K+G+QFEA+T+ H+N+YA+AGLRTLV+AYRE+ E+EY +
Sbjct: 607 DGKLLLLSKGADNVMFERLAKNGRQFEAKTQEHVNQYADAGLRTLVLAYREVDENEYIEF 666
Query: 479 EKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKV 538
K F +AK SV+ DREAL+ +K+ERDLILLGATAVEDKLQ GVPECIDKLAQAGIK+
Sbjct: 667 NKSFNEAKASVSEDREALIDEITDKMERDLILLGATAVEDKLQNGVPECIDKLAQAGIKI 726
Query: 539 WVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598
WVLTGDKMETAINIG+A SLLRQEMKQI+I L++P +++LEK G K+ I S ESV Q
Sbjct: 727 WVLTGDKMETAINIGFASSLLRQEMKQIIINLETPQIKSLEKSGGKDEIELASRESVVMQ 786
Query: 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKA 658
++EG + + ++ S F L+IDGKSL +AL+ +++KMFLDLA CASVICCRSSPKQKA
Sbjct: 787 LQEGKALLAASGASSEAFALIIDGKSLTYALEDEIKKMFLDLATSCASVICCRSSPKQKA 846
Query: 659 LVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLER 717
LVTRLVK GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD AIAQFR+LER
Sbjct: 847 LVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLER 906
Query: 718 LLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTS 777
LLLVHGHWCY RI+ MICYFFYKN+TFG T+F YEAY SFSG+PAYNDW++S +NVFF+S
Sbjct: 907 LLLVHGHWCYSRIASMICYFFYKNITFGVTVFLYEAYTSFSGQPAYNDWFLSLFNVFFSS 966
Query: 778 LPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAXXXXXXXXXX 837
LPVIALGVFDQDVSAR C K+PLLYQEGVQNILFSW RI+GWM NG +SA
Sbjct: 967 LPVIALGVFDQDVSARFCYKFPLLYQEGVQNILFSWKRIIGWMFNGFISALAIFFLCKES 1026
Query: 838 XXXQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYIFL 897
Q F DG E+LG MY+ VVW VN QMALSI+YFTW+QH IWGSIA WYIFL
Sbjct: 1027 LKHQLFDPDGKTAGREILGGTMYTCVVWVVNLQMALSISYFTWVQHIVIWGSIAFWYIFL 1086
Query: 898 VVYGSLPPTFSTTAYKVLVEACAPSILYWXXXXXXXXXXXXPYFLYRAFQTRFRPMYHDL 957
++YG++ P+FST AY V +EA AP+ YW PYF+Y++ Q RF P YH +
Sbjct: 1087 MIYGAMTPSFSTDAYMVFLEALAPAPSYWLTTLFVMIFALIPYFVYKSVQMRFFPKYHQM 1146
Query: 958 IQRQRLEGSETE 969
IQ R EG +
Sbjct: 1147 IQWIRYEGHSND 1158
|
|
| TAIR|locus:2031860 ACA.l "autoinhibited Ca2+/ATPase II" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3289 (1162.8 bits), Expect = 0., Sum P(2) = 0.
Identities = 628/975 (64%), Positives = 762/975 (78%)
Query: 1 MNLDGETNLKLKRSLEATNH-LRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPL 59
MNLDGETNLK+K+ LEAT+ L ++ F++ AV+KCEDPN LY+FVGTL +E ++ PL
Sbjct: 192 MNLDGETNLKVKQGLEATSSALHEDSDFKELKAVVKCEDPNADLYTFVGTLHFEEQRLPL 251
Query: 60 SPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYXXXXXX 119
S Q+LLRDSKL+NT+Y+YGVVVFTGHDTKV+QN+TDPPSKRS+IERKMDKI+Y
Sbjct: 252 SITQLLLRDSKLRNTEYIYGVVVFTGHDTKVIQNSTDPPSKRSRIERKMDKIIYLMFGVV 311
Query: 120 XXXXXXXXVFFGIETKRDI--DGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLY 177
+ FGIET+ D +GG+ RWYL+PD+A +F+DP RAP+AA HF T +MLY
Sbjct: 312 FLMSFIGSIVFGIETREDRVRNGGRTERWYLRPDNADIFFDPDRAPMAAVYHFFTAVMLY 371
Query: 178 GYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKT 237
Y IPISLY+SIEIVKVLQS+FIN+D MYYE+ DKPA ARTSNLNEELG VDTILSDKT
Sbjct: 372 SYFIPISLYVSIEIVKVLQSLFINNDILMYYEENDKPAHARTSNLNEELGMVDTILSDKT 431
Query: 238 GTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESG 297
GTLTCNSMEF+KCS+AG AYGR +TEVER++A R + DD L+ + +SG
Sbjct: 432 GTLTCNSMEFIKCSIAGTAYGRGITEVERSMAMRSNGSSLVGDD-------LDVVVDQSG 484
Query: 298 KSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDE 357
+KGFNF DER+M G WV + + V+QKFFR+LA+CHTAIP+ +E TG +SYEAESPDE
Sbjct: 485 PKIKGFNFLDERVMKGNWVKQRDAAVLQKFFRLLAVCHTAIPETDEATGSVSYEAESPDE 544
Query: 358 AAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRN 417
AAFV+AARE GF+FF +Q IS ELD SG+ V RVY LL+VLEF S+RKRMSV+VR+
Sbjct: 545 AAFVVAAREFGFEFFSRTQNGISFRELDLASGKTVERVYRLLNVLEFNSARKRMSVIVRD 604
Query: 418 PENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRI 477
+ +LLLL KGAD+VMFERL+K+G++FE +TR H+N YA+AGLRTL++AYRE+ E+EY
Sbjct: 605 EDGRLLLLSKGADNVMFERLAKNGRKFEEKTREHVNEYADAGLRTLILAYREVDENEYIE 664
Query: 478 WEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIK 537
+ K F +AK SVT+DRE+L+ E++ERDLILLGATAVEDKLQ GVP+CIDKLAQAGIK
Sbjct: 665 FSKNFNEAKNSVTADRESLIDEITEQMERDLILLGATAVEDKLQNGVPDCIDKLAQAGIK 724
Query: 538 VWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597
+WVLTGDKMETAINIG+ACSLLRQEMKQI+I L++P ++ALEK G+K+ I S ESV
Sbjct: 725 IWVLTGDKMETAINIGFACSLLRQEMKQIIINLETPHIKALEKAGEKDAIEHASRESVVN 784
Query: 598 QIREG--ISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPK 655
Q+ EG + +S+ S F L+IDGKSL +AL+ +K FLDLA CASVICCRSSPK
Sbjct: 785 QMEEGKALLTASSSASSHEAFALIIDGKSLTYALEDDFKKKFLDLATGCASVICCRSSPK 844
Query: 656 QKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF 714
QKALVTRLVK GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD AIAQFR+
Sbjct: 845 QKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRY 904
Query: 715 LERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVF 774
LERLLLVHGHWCY RIS MICYFFYKN+TFG T+F YEAY SFS +PAYNDW++S +NVF
Sbjct: 905 LERLLLVHGHWCYSRISSMICYFFYKNITFGVTVFLYEAYTSFSAQPAYNDWFLSLFNVF 964
Query: 775 FTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAXXXXXXX 834
F+SLPVIALGVFDQDVSAR C K+PLLYQEGVQN+LFSW RI+GWM NGV +A
Sbjct: 965 FSSLPVIALGVFDQDVSARYCYKFPLLYQEGVQNLLFSWKRIIGWMFNGVFTALAIFFLC 1024
Query: 835 XXXXXXQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWY 894
Q + +G E+LG MY+ VVW VN QMAL+I+YFTW+QH IWGS+A WY
Sbjct: 1025 KESLKHQLYNPNGKTAGREILGGTMYTCVVWVVNLQMALAISYFTWLQHIVIWGSVAFWY 1084
Query: 895 IFLVVYGSLPPTFSTTAYKVLVEACAPSILYWXXXXXXXXXXXXPYFLYRAFQTRFRPMY 954
IFL++YG++ P+FST AYKV +EA AP+ YW P+F++++ Q RF P Y
Sbjct: 1085 IFLMIYGAITPSFSTDAYKVFIEALAPAPSYWLTTLFVMFFALIPFFVFKSVQMRFFPGY 1144
Query: 955 HDLIQRQRLEGSETE 969
H +IQ R EG +
Sbjct: 1145 HQMIQWIRYEGHSND 1159
|
|
| TAIR|locus:2007858 AT1G17500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2895 (1024.1 bits), Expect = 1.2e-301, P = 1.2e-301
Identities = 564/1018 (55%), Positives = 731/1018 (71%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
MNLDGETNLK+KRSLE T L D +SF+ FT +I+CEDPN LY+FVG L+YE + +PL
Sbjct: 195 MNLDGETNLKVKRSLEVTLSLDDYDSFKDFTGIIRCEDPNPSLYTFVGNLEYERQIFPLD 254
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYXXXXXXX 120
P QILLRDSKL+NT YVYGVVVFTGHDTKVMQN+T PSKRS+IE+ MD I+Y
Sbjct: 255 PSQILLRDSKLRNTPYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKTMDYIIYTLLVLLI 314
Query: 121 XXXXXXXVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 180
F ETK + + WYL+P++ +P A F+H +T L+LYGYL
Sbjct: 315 LISCISSSGFAWETKFHMP----KWWYLRPEEPENLTNPSNPVYAGFVHLITALLLYGYL 370
Query: 181 IPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTL 240
IPISLY+SIE+VKVLQ+ FIN D MY ++ PA ARTSNLNEELGQVDTILSDKTGTL
Sbjct: 371 IPISLYVSIEVVKVLQASFINKDLHMYDSESGVPAHARTSNLNEELGQVDTILSDKTGTL 430
Query: 241 TCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDD--SQTDAPGLNGNIVESGK 298
TCN M+F+KCS+AG +YG +EVE A++ E + S+T P +E
Sbjct: 431 TCNQMDFLKCSIAGTSYGVRSSEVEVAAAQQMAVDLDEHGEVSSRTSTPRAQARDIEVES 490
Query: 299 SV------KGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEA 352
S+ KGF F D R+M+G W+ EPH+D I FFR+LAICHTAIP++NEETG+ +YEA
Sbjct: 491 SITPRIPIKGFGFEDIRLMDGNWLREPHTDDILLFFRILAICHTAIPELNEETGKYTYEA 550
Query: 353 ESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMS 412
ESPDEA+F+ AA E GF FF +Q+S+ +HE SGQ + R Y++L++L+FTS RKRMS
Sbjct: 551 ESPDEASFLTAASEFGFVFFKRTQSSVYVHERLSHSGQTIEREYKVLNLLDFTSKRKRMS 610
Query: 413 VMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGE 472
V+VR+ E Q+LLLCKGADS++FERL+K+G+ + T +H+N Y EAGLRTL ++YR+L E
Sbjct: 611 VVVRDEEGQILLLCKGADSIIFERLAKNGKVYLGPTTKHLNEYGEAGLRTLALSYRKLDE 670
Query: 473 DEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLA 532
+EY W EF KAKTS+ SDR+ L+ ++ IE+DLIL+GATAVEDKLQKGVP+CIDKLA
Sbjct: 671 EEYSAWNAEFHKAKTSIGSDRDELLERISDMIEKDLILVGATAVEDKLQKGVPQCIDKLA 730
Query: 533 QAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSL 592
QAG+K+WVLTGDKMETAINIGY+CSLLRQ MKQI IT+ + + + + + K+NI L
Sbjct: 731 QAGLKLWVLTGDKMETAINIGYSCSLLRQGMKQICITVVNSEGASQDAKAVKDNI----L 786
Query: 593 ESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRS 652
+TK ++ V K+ F L+IDGK+L +AL+ +++ FL LA+DCASVICCR
Sbjct: 787 NQITKAVQ----MVKLEKDPHAAFALIIDGKTLTYALEDEMKYQFLALAVDCASVICCRV 842
Query: 653 SPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711
SPKQKALVTRLVK GTGK TLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD++IAQ
Sbjct: 843 SPKQKALVTRLVKEGTGKITLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQ 902
Query: 712 FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCY 771
FRFLERLL+VHGHWCY+RI+ MICYFFYKN+ FG TLF++EA+ FSG+ YND+Y+ +
Sbjct: 903 FRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSVYNDYYLLLF 962
Query: 772 NVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAXXXX 831
NV TSLPVIALGVF+QDVS+ +CL++P LYQ+G +N+ F W RILGWM NGV S+
Sbjct: 963 NVVLTSLPVIALGVFEQDVSSEICLQFPALYQQGKKNLFFDWYRILGWMGNGVYSSLVIF 1022
Query: 832 XXXXXXXXXQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIA 891
QAFR G D + +G M++ ++WAVN Q+AL++++FTWIQH IWGSI
Sbjct: 1023 FLNIGIIYEQAFRVSGQTADMDAVGTTMFTCIIWAVNVQIALTVSHFTWIQHVLIWGSIG 1082
Query: 892 LWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWXXXXXXXXXXXXPYFLYRAFQTRFR 951
LWY+F+ +YG +PP+ S Y++LVE AP+ +YW PYF + +FQ
Sbjct: 1083 LWYLFVALYGMMPPSLSGNIYRILVEILAPAPIYWIATFLVTVTTVLPYFAHISFQRFLH 1142
Query: 952 PMYHDLIQR----------QRLEGSE-TEISSQTEVSSELPAQVEIKMQHLKANLRQR 998
P+ H +IQ +R+ E T+ +T++ A+V+ K++HL++ L ++
Sbjct: 1143 PLDHHIIQEIKYYKRDVEDRRMWTRERTKAREKTKIG--FTARVDAKIRHLRSKLNKK 1198
|
|
| TAIR|locus:2030180 AT1G72700 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2848 (1007.6 bits), Expect = 1.2e-296, P = 1.2e-296
Identities = 554/1027 (53%), Positives = 727/1027 (70%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
MNLDGETNLK+KRSLE + L D+ESF+ F A I+CEDPN LY+FVG L++E + +PL
Sbjct: 195 MNLDGETNLKVKRSLEVSLPLDDDESFKNFMATIRCEDPNPNLYTFVGNLEFERQTFPLD 254
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYXXXXXXX 120
P QILLRDSKL+NT YVYGVVVFTG DTKVMQN+T PSKRS+IER MD I+Y
Sbjct: 255 PSQILLRDSKLRNTTYVYGVVVFTGFDTKVMQNSTKSPSKRSRIERTMDYIIYTLLVLLI 314
Query: 121 XXXXXXXVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 180
F ET+ + + WYL+P + F +P A +H +T L+LYGYL
Sbjct: 315 LISCISSSGFAWETEFHMP----KMWYLRPGEPIDFTNPINPIYAGVVHLITALLLYGYL 370
Query: 181 IPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTL 240
IPISLY+SIE+VKV Q+ FIN D MY +++ PA ARTSNLNEELGQV TILSDKTGTL
Sbjct: 371 IPISLYVSIEVVKVWQASFINQDLHMYDDESGVPANARTSNLNEELGQVHTILSDKTGTL 430
Query: 241 TCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKG---ERTFEV--------------DDSQ 283
TCN M+F+KCS+AG +YG +EVE AK+ E E+ D S+
Sbjct: 431 TCNQMDFLKCSIAGTSYGVRSSEVEVAAAKQMAVDLEEHGEISSTPQSQTKVYGTWDSSR 490
Query: 284 TDAPGLNG-NIVESGKS-VKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDV 341
T + G N + ++ +KGF F D R+MNG W+ E + I +FFR+LAICHTAIP++
Sbjct: 491 TQEIEVEGDNNYNTPRAPIKGFGFEDNRLMNGNWLRESQPNDILQFFRILAICHTAIPEL 550
Query: 342 NEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHV 401
NEETG+ +YEAESPDEA+F+ AARE GF+FF +Q+S+ + E SGQ + R Y++L++
Sbjct: 551 NEETGKYTYEAESPDEASFLAAAREFGFEFFKRTQSSVFIRERFSGSGQIIEREYKVLNL 610
Query: 402 LEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLR 461
LEFTS RKRM+V+VR+ E Q+LLLCKGADS++FERL+K+G+ + T RH+ Y EAGLR
Sbjct: 611 LEFTSKRKRMTVIVRDEEGQILLLCKGADSIIFERLAKNGKTYLGPTTRHLTEYGEAGLR 670
Query: 462 TLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQ 521
TL +AYR+L EDEY W EFLKAKTS+ SDR+ L+ + A+ IE++LIL+GATAVEDKLQ
Sbjct: 671 TLALAYRKLDEDEYAAWNSEFLKAKTSIGSDRDELLETGADMIEKELILIGATAVEDKLQ 730
Query: 522 KGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQ 581
KGVP+CIDKLAQAG+K+WVLTGDKMETAINIG+ACSLLRQ M+QI IT ++ +
Sbjct: 731 KGVPQCIDKLAQAGLKLWVLTGDKMETAINIGFACSLLRQGMRQICIT-------SMNSE 783
Query: 582 GDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLA 641
G ++ +V E++ Q+ + + V K+ F L+IDGK+L +AL+ ++ FL LA
Sbjct: 784 GGSQDSKRVVKENILNQLTKAVQMVKLEKDPHAAFALIIDGKTLTYALEDDMKYQFLALA 843
Query: 642 IDCASVICCRSSPKQKALVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 700
+DCASVICCR SPKQKALV RLVK GTGKTTLAIGDGANDVGM+QEADIGVGISGVEGMQ
Sbjct: 844 VDCASVICCRVSPKQKALVVRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQ 903
Query: 701 AVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGR 760
AVM+SD++IAQFRFLERLL+VHGHWCY+RI+ MICYFFYKN+ FG TLF++EA+ FSG+
Sbjct: 904 AVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQ 963
Query: 761 PAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWM 820
YND+Y+ +NV TSLPVIALGVF+QDVS+ +CL++P LYQ+G +N+ F W RILGWM
Sbjct: 964 SVYNDYYLLLFNVVLTSLPVIALGVFEQDVSSEICLQFPALYQQGTKNLFFDWSRILGWM 1023
Query: 821 SNGVLSAXXXXXXXXXXXXXQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTW 880
NGV ++ QAFR +G D + +G M++ ++WA N Q+AL++++FTW
Sbjct: 1024 CNGVYASLVIFFLNIGIIYSQAFRDNGQTADMDAVGTTMFTCIIWAANVQIALTMSHFTW 1083
Query: 881 IQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWXXXXXXXXXXXXPY 940
IQH IWGSI +WY+F+ +Y +PP++S Y++L E AP+ +YW PY
Sbjct: 1084 IQHVLIWGSIGMWYLFVAIYSMMPPSYSGNIYRILDEILAPAPIYWMATLLVTVAAVLPY 1143
Query: 941 FLYRAFQTRFRPMYHDLIQRQRLEGSETEIS-----SQTEVSSE----LPAQVEIKMQHL 991
+ AFQ P+ H +IQ + G + E + +T+ + A+V+ K++HL
Sbjct: 1144 VAHIAFQRFLNPLDHHIIQEIKYYGRDIEDARLWTRERTKAREKTKIGFTARVDAKIRHL 1203
Query: 992 KANLRQR 998
++ L ++
Sbjct: 1204 RSKLNKK 1210
|
|
| TAIR|locus:2088217 AT3G13900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2039 (722.8 bits), Expect = 4.6e-295, Sum P(2) = 4.6e-295
Identities = 385/710 (54%), Positives = 517/710 (72%)
Query: 300 VKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAA 359
+KGF+F D+R+M G W+NEP+SD I F R+LA+CHTAIP+V+E+TG+ +YEAESPDE A
Sbjct: 518 IKGFSFEDQRLMGGNWLNEPNSDDILMFLRILAVCHTAIPEVDEDTGKCTYEAESPDEVA 577
Query: 360 FVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPE 419
F++AA E GF+F +Q+S+ + E SGQ V R Y++L+VL+FTS RKRMSV+VR+ +
Sbjct: 578 FLVAAGEFGFEFTKRTQSSVFISERH--SGQPVEREYKVLNVLDFTSKRKRMSVIVRDEK 635
Query: 420 NQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWE 479
Q+LLLCKGADS++FERLSK+G+ + T +H+N Y EAGLRTL ++YR+L E EY IW
Sbjct: 636 GQILLLCKGADSIIFERLSKNGKNYLEATSKHLNGYGEAGLRTLALSYRKLDETEYSIWN 695
Query: 480 KEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVW 539
EF KAKTSV +DR+ ++ ++ +E++LIL+GATAVEDKLQKGVP+CIDKLAQAG+K+W
Sbjct: 696 SEFHKAKTSVGADRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 755
Query: 540 VLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQI 599
VLTGDKMETAINIGYACSLLRQ MKQI I L + ++G ++ + E++ QI
Sbjct: 756 VLTGDKMETAINIGYACSLLRQGMKQIYIALRN-------EEGSSQDPEAAARENILMQI 808
Query: 600 REGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKAL 659
+ K+ F L+IDGK+L +AL+ ++ FL LA+DCASVICCR SPKQKAL
Sbjct: 809 INASQMIKLEKDPHAAFALIIDGKTLTYALEDDIKYQFLALAVDCASVICCRVSPKQKAL 868
Query: 660 VTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERL 718
VTRL K GTGKTTLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD++IAQFRFLERL
Sbjct: 869 VTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERL 928
Query: 719 LLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSL 778
L+VHGHWCY+RI+ MICYFFYKN+TFG TLF++EA+ FSG+ YND Y+ +NV TSL
Sbjct: 929 LVVHGHWCYKRIAQMICYFFYKNITFGLTLFYFEAFTGFSGQAIYNDSYLLLFNVILTSL 988
Query: 779 PVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAXXXXXXXXXXX 838
PVIALGVF+QDVS+ +CL++P LYQ+G +N+ F W RI+GWM+NGV ++
Sbjct: 989 PVIALGVFEQDVSSEVCLQFPALYQQGPKNLFFDWYRIIGWMANGVYASVVIFSLNIGIF 1048
Query: 839 XXQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYIFLV 898
Q+F G D + +G AM++ ++WAVN Q+AL++++FTWIQH IWGSI WYIFL
Sbjct: 1049 HVQSFCSGGQTADMDAMGTAMFTCIIWAVNVQIALTMSHFTWIQHVLIWGSIVTWYIFLA 1108
Query: 899 VYGSLPPTFSTTAYKVLVEACAPSILYWXXXXXXXXXXXXPYFLYRAFQTRFRPMYHDLI 958
++G LPP S + +L E AP+ ++W PY Y +FQ P+ H +I
Sbjct: 1109 LFGMLPPKVSGNIFHMLSETLAPAPIFWLTSLLVIAATTLPYLAYISFQRSLNPLDHHII 1168
Query: 959 QRQ---RLEGSE----TEISSQTEVSSEL--PAQVEIKMQHLKANLRQRN 999
Q R++ + T S+ +++ A+V+ K++ L+ L++++
Sbjct: 1169 QEIKHFRIDVQDECMWTRERSKAREKTKIGVTARVDAKIRQLRGRLQRKH 1218
|
|
| TAIR|locus:2020038 AT1G54280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2027 (718.6 bits), Expect = 7.6e-293, Sum P(2) = 7.6e-293
Identities = 393/758 (51%), Positives = 529/758 (69%)
Query: 252 VAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIM 311
VA ++ + T+ LA K FE++ T + + + VKGF+F D R+M
Sbjct: 474 VANLSMNKGRTQRYAKLAS-KTSSDFELETVVTASDEKDQ---KQNTGVKGFSFEDNRLM 529
Query: 312 NGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQF 371
N W+NEP+SD I FFR+LA+CHTAIP+V+E+TG +YEAESPDE AF++A+RE GF+F
Sbjct: 530 NENWLNEPNSDDILMFFRILAVCHTAIPEVDEDTGMCTYEAESPDEVAFLVASREFGFEF 589
Query: 372 FGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADS 431
+Q+S+ + E SGQ V+R Y++L++L+FTS RKRMS +VR+ E Q+LLLCKGADS
Sbjct: 590 TKRTQSSVFIAERFSSSGQPVDREYKILNLLDFTSKRKRMSAIVRDEEGQILLLCKGADS 649
Query: 432 VMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTS 491
++FERLSK G+++ T +H+N Y EAGLRTL + YR+L E EY W EF KAKTSV +
Sbjct: 650 IIFERLSKSGKEYLGATSKHLNVYGEAGLRTLALGYRKLDETEYAAWNSEFHKAKTSVGA 709
Query: 492 DREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAIN 551
DR+ ++ ++ +E++LIL+GATAVEDKLQKGVP+CID LAQAG+K+WVLTGDKMETAIN
Sbjct: 710 DRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAIN 769
Query: 552 IGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKE 611
IGYACSLLRQ MKQI I+L + + E + E K ES+ QI + K+
Sbjct: 770 IGYACSLLRQGMKQISISLTNVE----ESSQNSEAAAK---ESILMQITNASQMIKIEKD 822
Query: 612 SKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVK-GTGKT 670
F L+IDGK+L +AL ++ FL LA+DCASVICCR SPKQKALVTRL K GTGKT
Sbjct: 823 PHAAFALIIDGKTLTYALKDDVKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKT 882
Query: 671 TLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRI 730
TLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD++IAQFRFLERLL+VHGHWCY+RI
Sbjct: 883 TLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRI 942
Query: 731 SMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDV 790
+ MICYFFYKN+TFG TLF++E + FSG+ YND Y+ +NV TSLPVI+LGVF+QDV
Sbjct: 943 AQMICYFFYKNITFGLTLFYFECFTGFSGQSIYNDSYLLLFNVVLTSLPVISLGVFEQDV 1002
Query: 791 SARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAXXXXXXXXXXXXXQAFRKDGHAV 850
+ +CL++P LYQ+G +N+ F W RILGWM NGV ++ Q+FR DG
Sbjct: 1003 PSDVCLQFPALYQQGPKNLFFDWYRILGWMGNGVYASIVIFTLNLGIFHVQSFRSDGQTA 1062
Query: 851 DYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTT 910
D +G AM++ ++WAVN Q+AL++++FTWIQH IWGSI WY+FL +YG LP S
Sbjct: 1063 DMNAMGTAMFTCIIWAVNVQIALTMSHFTWIQHVMIWGSIGAWYVFLALYGMLPVKLSGN 1122
Query: 911 AYKVLVEACAPSILYWXXXXXXXXXXXXPYFLYRAFQTRFRPMYHDLIQRQ---RLEGSE 967
+ +LVE AP+ ++W PY + ++Q P+ H +IQ R++ +
Sbjct: 1123 IFHMLVEILAPAPIFWLTSLLVIAATTLPYLFHISYQRSVNPLDHHIIQEIKHFRIDVED 1182
Query: 968 TEI----SSQTEVSSEL--PAQVEIKMQHLKANLRQRN 999
+ S+ +++ A+V+ K++ L+ L++++
Sbjct: 1183 ERMWKREKSKAREKTKIGFTARVDAKIRQLRGRLQRKH 1220
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|
| TAIR|locus:2025961 ALA3 "aminophospholipid ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1773 (629.2 bits), Expect = 9.7e-183, P = 9.7e-183
Identities = 371/834 (44%), Positives = 520/834 (62%)
Query: 157 YDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSV-FINHDRDMYYEDTDKPA 215
++ R + F F T + L+ +IPISLY+SIE++K +QS FIN D +MY+ +T+ PA
Sbjct: 334 WEYRNGLMIGFFTFFTLVTLFSSIIPISLYVSIEMIKFIQSTQFINRDLNMYHAETNTPA 393
Query: 216 RARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGER 275
ARTSNLNEELGQV+ I SDKTGTLT N MEF KCS+ GV+YG +TE+E+ +A+R G
Sbjct: 394 SARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGVSYGCGVTEIEKGIAQRHG-- 451
Query: 276 TFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICH 335
+V + Q G I E KGFNF D R+M G W NEP+ D+ ++ FR LAICH
Sbjct: 452 -LKVQEEQRST----GAIRE-----KGFNFDDPRLMRGAWRNEPNPDLCKELFRCLAICH 501
Query: 336 TAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRV 395
T +P+ +E +I Y+A SPDEAA V AA+ GF F+ + T + + E K+ V
Sbjct: 502 TVLPEGDESPEKIVYQAASPDEAALVTAAKNFGFFFYRRTPTMVYVRESHVEKMGKIQDV 561
Query: 396 -YELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINR 454
YE+L+VLEF S+RKR SV+ R P+ +L+L CKGAD+V+FERL+ TR H+
Sbjct: 562 AYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKGADNVIFERLANGMDDVRKVTREHLEH 621
Query: 455 YAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGAT 514
+ +GLRTL +AY++L + Y W ++F++AK+++ DRE + AE IE+DLIL+G+T
Sbjct: 622 FGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSALR-DREKKLDEVAELIEKDLILIGST 680
Query: 515 AVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPD 574
A+EDKLQ+GVP CI+ L++AGIK+WVLTGDKMETAINI YAC+L+ EMKQ VI+ ++
Sbjct: 681 AIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFVISSETDA 740
Query: 575 MEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKV--TFGLVIDGKSLDFALDKK 632
+ E++GD+ I +V E V +++++ + + + + LVIDGK L +ALD
Sbjct: 741 IREAEERGDQVEIARVIKEEVKRELKKSLEEAQHSLHTVAGPKLSLVIDGKCLMYALDPS 800
Query: 633 LEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGDGANDVGMLQEADIGV 691
L M L L+++C SV+CCR SP QKA VT LV KG K TL+IGDGANDV M+Q A +G+
Sbjct: 801 LRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQKITLSIGDGANDVSMIQAAHVGI 860
Query: 692 GISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWY 751
GISG+EGMQAVM+SD+AIAQFRFL LLLVHG W Y RI ++ YFFYKNLTF T FW+
Sbjct: 861 GISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVMYFFYKNLTFTLTQFWF 920
Query: 752 EAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILF 811
FSG+ Y+DW+ S +NV FT+LPVI LG+F++DVSA L +YP LY+EG++N F
Sbjct: 921 TFRTGFSGQRFYDDWFQSLFNVVFTALPVIVLGLFEKDVSASLSKRYPELYREGIRNSFF 980
Query: 812 SWPRILGWMSNGVLSAXXXXXXXXXXXXXQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQM 871
W + W ++ V + A G + +++ +V AVN ++
Sbjct: 981 KWRVVAVWATSAVYQSLVCYLFVTTSSFG-AVNSSGKVFGLWDVSTMVFTCLVIAVNVRI 1039
Query: 872 ALSINYFTWIQHFFIWGSIALWYIFLVVY-GSLPP-TFSTTAYKVLVEACAPSILYWXXX 929
L N T + + GSI W +F VY G + P + Y V+ + Y+
Sbjct: 1040 LLMSNSITRWHYITVGGSILAWLVFAFVYCGIMTPHDRNENVYFVIYVLMSTFYFYFTLL 1099
Query: 930 XXXXXXXXXPYFLYRAFQTRFRPMYHDLIQRQRLEGSETEISSQTEVSSELPAQ 983
F+++ + F P + ++Q S+ + Q EV +EL Q
Sbjct: 1100 LVPIVSLLGD-FIFQGVERWFFPYDYQIVQEIHRHESDASKADQLEVENELTPQ 1152
|
|
| DICTYBASE|DDB_G0269380 DDB_G0269380 "P-type ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1110 (395.8 bits), Expect = 1.3e-176, Sum P(2) = 1.3e-176
Identities = 238/589 (40%), Positives = 354/589 (60%)
Query: 396 YELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRY 455
+E+L+VLEF S RKRMSV+ RNP+ +++L CKGAD+ + L K ++ + T + +
Sbjct: 681 FEVLNVLEFNSDRKRMSVICRNPQGRIILYCKGADTTVLPLLRKDQEELYSITLEFLQDF 740
Query: 456 AEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATA 515
A GLRTL +AY L E++Y+ W + + +A S+ DR+ V +E IER+L L+G+TA
Sbjct: 741 AADGLRTLCLAYTYLEEEDYQQWNELYKEAAISI-QDRDMKVDKVSELIERNLSLIGSTA 799
Query: 516 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDM 575
+EDKLQ+GVP+ I L +A IK+WVLTGDK ETAINIG++C LL +M+ +I L+ +
Sbjct: 800 IEDKLQEGVPQAIANLIKANIKIWVLTGDKQETAINIGFSCHLLTSDMR--IIILNGSNQ 857
Query: 576 EALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEK 635
E D N + ++++ E + NS F LV++G L+FAL+ +L+
Sbjct: 858 E------DVHNQIQGAIDAYFSDDAE--NHQNSG------FALVVEGSCLNFALEGELKS 903
Query: 636 MFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKT-TLAIGDGANDVGMLQEADIGVGIS 694
+FL+LA +C SVICCR++P QKA V ++V+ T + TLAIGDGANDV M+Q A IG+GIS
Sbjct: 904 VFLELAANCKSVICCRTTPLQKAQVVKMVRDTLRAVTLAIGDGANDVSMIQAAHIGIGIS 963
Query: 695 GVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAY 754
G EGMQAVM+SDY+IAQF FL RLL+VHG W Y+R S ++ Y FYKN+ F T FW+ Y
Sbjct: 964 GHEGMQAVMASDYSIAQFSFLYRLLVVHGRWDYKRNSKLMLYCFYKNMVFAMTQFWFGIY 1023
Query: 755 ASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWP 814
SFS + ++ W +S +NV FT LP+I +FDQDVSA KYP LY G ++ F+
Sbjct: 1024 NSFSAQTMFDSWSISIFNVVFTGLPIIVCAIFDQDVSAESSQKYPQLYASGQKDSEFNLR 1083
Query: 815 RILGWMSNG-VLSAXXXXXXXXXXXXXQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMAL 873
+ W+ + S + G +D +G ++ VV VN ++A
Sbjct: 1084 VLWVWIVEAWIHSVVIFFGVYGLYSHGSTLLESGDTLDLWAMGQNIFILVVITVNFKLAF 1143
Query: 874 SINYFTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTA---YKVLVEACA-PSILYWXXX 929
Y+TWI HF IW SI +W+ ++ V ++P ST++ Y V + A PS +W
Sbjct: 1144 ETRYWTWITHFSIWASILIWFAWVAVLAAIPGIGSTSSGDIYYVAYKIFASPS--FWLSI 1201
Query: 930 XXXXXXXXXPYFLYRAFQTRFRPMYHDLIQR-QRLEGSETEISSQTEVS 977
P +Y+ Q +P + ++Q +++ G ++I S+ ++
Sbjct: 1202 AVLPTICLAPDVIYKYIQRDVKPYNYQIVQEIEKIYGKPSDIMSKENLA 1250
|
|
| ASPGD|ASPL0000000502 AN6112 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 1188 (423.3 bits), Expect = 2.0e-171, Sum P(2) = 2.0e-171
Identities = 275/638 (43%), Positives = 372/638 (58%)
Query: 294 VESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNE-ETGEISYEA 352
VE G V +F+ R N + + P D I F +LA CHT IP+ +E + +I Y+A
Sbjct: 636 VEDGVEVGVHDFKKLR-QNLE--SHPTKDAIHHFLTLLATCHTVIPERSEADPDKIKYQA 692
Query: 353 ESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMS 412
SPDE A V A +G++F S+ + V+GQ+ YELL V EF S+RKRMS
Sbjct: 693 ASPDEGALVEGAARMGYKFSNRKPRSVII----TVAGQEYE--YELLAVCEFNSTRKRMS 746
Query: 413 VMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGE 472
+ R P+ ++ + KGAD+V+ ERL + E T +H+ YA GLRTL +A RE+ E
Sbjct: 747 TIFRCPDGRIRIYIKGADTVILERLHQDNPIVEG-TLQHLEEYASDGLRTLCLAMREIPE 805
Query: 473 DEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLA 532
DE++ W + F KA T+V +R + AAE IE+D LLGATA ED+LQ GVP+ I L
Sbjct: 806 DEFQQWYQIFDKAATTVGGNRAEELDKAAELIEKDFYLLGATAKEDRLQDGVPDTIHTLQ 865
Query: 533 QAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSL 592
AGIK+WVLTGD+ ETAINIG +C L+ ++M +++ DS + ++N+TK L
Sbjct: 866 TAGIKIWVLTGDRQETAINIGMSCKLISEDMTLLIVNEDSAE-------ATRDNLTK-KL 917
Query: 593 ESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICC-- 650
++V Q A++ L+IDG+SL FAL+K +EK+FLDLA+ C +V+CC
Sbjct: 918 QAVQSQ--------TEAEQ----MALIIDGRSLTFALEKDMEKLFLDLAVLCKAVVCCCS 965
Query: 651 RSSPKQKALVTRLVKGTGKTTL-AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAI 709
R SP QKALV +LVK K+ L AIGDGANDV M+Q A +GVGISGVEG+QA S+D +I
Sbjct: 966 RVSPLQKALVVKLVKRHLKSLLLAIGDGANDVSMIQAAHVGVGISGVEGLQAARSADVSI 1025
Query: 710 AQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMS 769
AQFR+L +LLLVHG W Y RIS +I Y FYKN+ T FWY +FSG Y W +S
Sbjct: 1026 AQFRYLRKLLLVHGAWSYHRISRVILYSFYKNIALYMTQFWYSFQNAFSGEVIYESWTLS 1085
Query: 770 CYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAXX 829
YNVFFT LP A+G+ DQ +SARL +YP LYQ G + + F W++NG +
Sbjct: 1086 FYNVFFTVLPPFAMGICDQFISARLLDRYPQLYQLGQKGLFFKRHSFWSWIANGFYHSLL 1145
Query: 830 XXXXXXXXXXXQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGS 889
+ DG + V G A+Y++V+ V + AL N +T I GS
Sbjct: 1146 LYIVSQLIFLYDLPQADGKVAGHWVWGSALYTAVLATVLGKAALITNIWTKYTFIAIPGS 1205
Query: 890 IALWYIFLVVYGSLPPT--FSTTAYKVLVEACAPSILY 925
+ +W FL YG P FS Y + I Y
Sbjct: 1206 MIIWLAFLPAYGYAAPAIGFSEEYYGTIPRLFTSPIFY 1243
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LK90 | ALA8_ARATH | 3, ., 6, ., 3, ., 1 | 0.7628 | 0.986 | 0.8292 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| AT3G27870 | haloacid dehalogenase-like hydrolase family protein; haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN- ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN- metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN- integral to membrane, membrane; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 14 growth stages; CONTAINS InterPro DOMAIN/s- Haloacid dehalogenase-like hydrolase (InterPro-IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro-IPR006539), ATPase, P-type, ATPase-ass [...] (1174 aa) | ||||||||||
(Arabidopsis thaliana) | |||||||||||
Predicted Functional Partners: | |||||||||||
| AT3G14460 | disease resistance protein (NBS-LRR class), putative; disease resistance protein (NBS-LRR class [...] (1424 aa) | • | 0.408 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1000 | |||
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.0 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-126 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 4e-28 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 4e-28 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 5e-25 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-21 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 2e-18 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 7e-14 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 3e-12 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 9e-12 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 4e-08 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 5e-08 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 1e-07 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-06 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 1e-06 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 2e-04 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 3e-04 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 7e-04 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 8e-04 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 0.002 | |
| PRK00192 | 273 | PRK00192, PRK00192, mannosyl-3-phosphoglycerate ph | 0.002 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 1269 bits (3286), Expect = 0.0
Identities = 488/963 (50%), Positives = 634/963 (65%), Gaps = 47/963 (4%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEG-KQYPL 59
NLDGETNLKL+++LE T + DE+ + F+ I+CE PN LYSF G + G +QYPL
Sbjct: 139 ANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPL 198
Query: 60 SPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTL 119
SP ILLR L+NTD+V GVVV+TGHDTK+M+NAT PSKRS++E++++ ++ +LF L
Sbjct: 199 SPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKRSRLEKELNFLIIILFCLL 258
Query: 120 ILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGY 179
++ SV GI WY++ D R A F FLT L+L+
Sbjct: 259 FVLCLISSVGAGIWNDAHGK----DLWYIRLD-----VSERNAAANGFFSFLTFLILFSS 309
Query: 180 LIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGT 239
LIPISLY+S+E+VK +Q+ FIN D MY+E TD PA RTSNLNEELGQV+ I SDKTGT
Sbjct: 310 LIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGT 369
Query: 240 LTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKS 299
LT N MEF KCS+AGV+YG TE++ + +R G + +
Sbjct: 370 LTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGSYVENENSMLVE-------------- 415
Query: 300 VKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEE-TGEISYEAESPDEA 358
KGF F D R+++ N+P++ I +FF LA+CHT +P+ N++ EI+Y+A SPDEA
Sbjct: 416 SKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEA 475
Query: 359 AFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNP 418
A V AAR+VGF FF + SISL + G+ YE+L+VLEF S RKRMSV+VRNP
Sbjct: 476 ALVKAARDVGFVFFERTPKSISLLI--EMHGETKE--YEILNVLEFNSDRKRMSVIVRNP 531
Query: 419 ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIW 478
+ ++ LLCKGAD+V+F+RLS G Q ET+ H+ YA GLRTL IAYREL E+EY W
Sbjct: 532 DGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEW 591
Query: 479 EKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKV 538
+E+ +A T++T DRE + AE IE+DLILLGATA+EDKLQ+GVPE I+ L QAGIK+
Sbjct: 592 NEEYNEASTALT-DREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKI 650
Query: 539 WVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598
WVLTGDK+ETAINIGY+C LL + M+QIVIT DS D + ++
Sbjct: 651 WVLTGDKVETAINIGYSCRLLSRNMEQIVITSDSLDATRSVE------------AAIKFG 698
Query: 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKA 658
+ + N+ +S LVIDGKSL +ALD++LEK FL LA+ C +VICCR SP QKA
Sbjct: 699 LEGTSEEFNNLGDSG-NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKA 757
Query: 659 LVTRLVK-GTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLER 717
V RLVK TGKTTLAIGDGANDV M+QEAD+GVGISG EGMQAVM+SD+AI QFRFL +
Sbjct: 758 DVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTK 817
Query: 718 LLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTS 777
LLLVHG W Y+RIS MI YFFYKNL F FWY Y FSG+ Y WYM YNVFFT+
Sbjct: 818 LLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTA 877
Query: 778 LPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNS 837
LPVI+LGVFDQDVSA L L+YP LY+EG + FS GWM +G+ +++IFFF +
Sbjct: 878 LPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFA 937
Query: 838 IFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYIFL 897
F G D+ +GV +++++V VN ++AL IN + WI IWGSI +W IF+
Sbjct: 938 YILGDFVSSGSVDDFSSVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILVWLIFV 997
Query: 898 VVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMYHDL 957
+VY S+ P + A+ + +WL L++V+ +LLP F Y+A Q FRP +D+
Sbjct: 998 IVYSSIFP---SPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYDI 1054
Query: 958 IQR 960
+Q
Sbjct: 1055 VQE 1057
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 627 bits (1618), Expect = 0.0
Identities = 362/973 (37%), Positives = 528/973 (54%), Gaps = 73/973 (7%)
Query: 1 MNLDGETNLKLKRSLEAT-NHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPL 59
+NLDGE+NLK + + + T + + ++E K +IKCE PN +Y F ++ +GK+ L
Sbjct: 224 INLDGESNLKTRYAKQETLSKIPEKE---KINGLIKCEKPNRNIYGFQANMEVDGKRLSL 280
Query: 60 SPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTL 119
P I+LR +LKNT + GV V+ G +TK M N + PSKRS++E +M+ + +L L
Sbjct: 281 GPSNIILRGCELKNTAWAIGVAVYCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFL 340
Query: 120 ILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAP-------LAAFLHFLT 172
I + + SV + +R D +Y + D F + F FL
Sbjct: 341 IALCTIVSVCAAVWLRRHRDELDTIPFYRRKD----FSEGGPKNYNYYGWGWEIFFTFLM 396
Query: 173 GLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTI 232
++++ +IPISLYIS+E+V+V Q+ F+ D MY E ++ + R N+NE+LGQ+ +
Sbjct: 397 SVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYV 456
Query: 233 LSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGN 292
SDKTGTLT N MEF S+ GV Y RT +D + ++G
Sbjct: 457 FSDKTGTLTENKMEFQCASIWGVDY--------------SDGRTPTQNDHAGYSVEVDGK 502
Query: 293 IVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGE----- 347
I+ VK E +G+ E + FF LA C+T +P V ++T +
Sbjct: 503 ILRPKMKVKVDPQLLELSKSGKDTEEAKH--VHDFFLALAACNTIVPIVVDDTSDPTVKL 560
Query: 348 ISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSS 407
+ Y+ ESPDE A V AA GF + S H + + G++ + + +L + EF S
Sbjct: 561 MDYQGESPDEQALVYAAAAYGFMLIERT----SGHIVIDIHGER--QRFNVLGLHEFDSD 614
Query: 408 RKRMSVMVRNPENQLLLLCKGADSVMFERLSKH-GQQFEAETRRHINRYAEAGLRTLVIA 466
RKRMSV++ P+ + + KGAD+ MF + + T H++ Y+ GLRTLV+
Sbjct: 615 RKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVG 674
Query: 467 YRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPE 526
REL + E+ W F A T++ R AL+ A +E +L +LGA+A+EDKLQ+GVPE
Sbjct: 675 MRELNDSEFEQWHFSFEAASTALIG-RAALLRKVASNVENNLTILGASAIEDKLQQGVPE 733
Query: 527 CIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 586
I+ L AGIKVWVLTGDK ETAI+IGY+ LL +M QI+I +S K+ +++
Sbjct: 734 AIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNS-------KESCRKS 786
Query: 587 ITKVSLESVTKQIREGISQ----VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI 642
+ + S GISQ ++A V L+IDG SL + LD +LE+ LA
Sbjct: 787 LEDALVMSKKLTTVSGISQNTGGSSAAASDPV--ALIIDGTSLVYVLDSELEEQLFQLAS 844
Query: 643 DCASVICCRSSPKQKALVTRLVKG-TGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQA 701
C+ V+CCR +P QKA + LVK T TLAIGDGANDV M+Q AD+GVGISG EG QA
Sbjct: 845 KCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQA 904
Query: 702 VMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRP 761
VM+SD+A+ QFRFL LLLVHGHW Y+R+ MI Y FY+N F LFWY + F+
Sbjct: 905 VMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTT 964
Query: 762 AYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGW-- 819
A N+W Y+V +T+LP I +G+ D+D+S R LKYP LY G + ++ L W
Sbjct: 965 AINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYN--SKLFWLT 1022
Query: 820 MSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFT 879
M + + + ++FF F +D +G +VV VN +A+ I +
Sbjct: 1023 MIDTLWQSAVVFFVPL-------FAYWASTIDGSSIGDLWTLAVVILVNLHLAMDIIRWN 1075
Query: 880 WIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLP 939
WI H IWGSI +I ++V ++P + Y + A + +WL L +VV+ LLP
Sbjct: 1076 WITHAAIWGSIVATFICVIVIDAIP---TLPGYWAIFHI-AKTGSFWLCLLAIVVAALLP 1131
Query: 940 YFLYRAFQTRFRP 952
F+ + F P
Sbjct: 1132 RFVVKVLYQYFTP 1144
|
Length = 1178 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 406 bits (1045), Expect = e-126
Identities = 211/951 (22%), Positives = 330/951 (34%), Gaps = 251/951 (26%)
Query: 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLS 60
L GE+ K++L T A + + N
Sbjct: 189 SALTGESLPVEKQALPLTK----------SDAPLGLDRDN-------------------- 218
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKR---SKIERKMDKIVYLLFS 117
+L + + + G+VV TG +T+ + A P+K+ + ++RK++K+ L
Sbjct: 219 ---MLFSGTTVVSGR-AKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLL- 273
Query: 118 TLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLY 177
L L+ G+ + FLT L L
Sbjct: 274 VLALVLGALVFVVGLFRGGN-------GLLES--------------------FLTALALA 306
Query: 178 GYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKT 237
+P L + I L + + D + R+ N E LG VD I SDKT
Sbjct: 307 VAAVPEGLPAVVTIALALGAQRMAKDNAIV----------RSLNAIETLGSVDVICSDKT 356
Query: 238 GTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESG 297
GTLT N M K + G
Sbjct: 357 GTLTQNKMTVKKIYINGG------------------------------------------ 374
Query: 298 KSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDE 357
G + D+ + + S + +F A+C++ P+ N Y+A P E
Sbjct: 375 ----GKDIDDKDLKD--------SPALLRFLLAAALCNSVTPEKNGW-----YQAGDPTE 417
Query: 358 AAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRN 417
A V A ++GF + Y +L + F S RKRMSV+V+
Sbjct: 418 GALVEFAEKLGFSL----------------DLSGLEVEYPILAEIPFDSERKRMSVIVKT 461
Query: 418 PENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRI 477
E + +L KGA V+ ER + + E GLRTL A +EL + R+
Sbjct: 462 DEGKYILFVKGAPEVILERCK---------SIGELEPLTEEGLRTLEEAVKELASEGLRV 512
Query: 478 WE---KEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQA 534
K+ +A+ D +IE DL+ LG T +ED ++ V E I++L +A
Sbjct: 513 LAVAYKKLDRAEKDDEVD----------EIESDLVFLGLTGIEDPPREDVKEAIEELREA 562
Query: 535 GIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLES 594
GIKVW++TGD +ETAI I C
Sbjct: 563 GIKVWMITGDHVETAIAIAKEC-------------------------------------- 584
Query: 595 VTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSP 654
GI E++ LVIDG LD D++L ++ +L+ + R SP
Sbjct: 585 -------GI-------EAEAESALVIDGAELDALSDEELAELVEELS------VFARVSP 624
Query: 655 KQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD--YAIAQF 712
+QKA + ++ +G GDG ND L+ AD+G+ + G EG A + +
Sbjct: 625 EQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGG-EGTDAAKEAADIVLLDDN 683
Query: 713 RFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYN 772
L +V G Y I I Y KN+ TL Y + N
Sbjct: 684 FATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIY--SLFNLFFLPLTPLQLLWIN 741
Query: 773 VFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFF 832
+ SLP +ALGV D +K P G + LF+ ++ L I F
Sbjct: 742 LLTDSLPALALGVED---PESDVMKRP---PRGPEEGLFNRKIFWRFILIIGL-LSAILF 794
Query: 833 FTTNSIFNQAFRKDGHAVDY-EVLGVAMYSSVVWAVNCQMALSINYFTWIQHFFIWGSIA 891
T ++ F + +D + L V Q+ L++ + + F +
Sbjct: 795 ILTFLLYLLGFIANTLGLDLFQALLQTTA--FTVLVLIQLLLTLAVRSRGRPFLSSLLFS 852
Query: 892 LWYIFLVVYGS-----LPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTL 937
Y++L + L K+ S+ WL + V + L
Sbjct: 853 NKYLWLALLVIIILQLLIIFLPPLNLKIFQPT-PLSLFEWLIAIAVALLLL 902
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 119 bits (301), Expect = 4e-28
Identities = 55/258 (21%), Positives = 88/258 (34%), Gaps = 72/258 (27%)
Query: 2 NLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSP 61
NL GE+N LK +L+ T + I + Y F GTL
Sbjct: 83 NLTGESNPVLKTALKETQ-----------SGTITGDLVFAGTYVFGGTLIVV-------- 123
Query: 62 QQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFS-TLI 120
+ + + T VVV TG +T R+ ++ K D++ +F L+
Sbjct: 124 ----VTPTGILTTVGRIAVVVKTGFET------------RTPLQSKRDRLENFIFILFLL 167
Query: 121 LISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 180
L++ ++ I K L L++ +
Sbjct: 168 LLALAVFLYLFIRGWDPNSIFKA--------------------------LLRALIVLVIV 201
Query: 181 IPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTL 240
+P +L ++ + + D + K R N EELG+VD + SDKTGTL
Sbjct: 202 VPPALPAAVTVALAVG------DARLA----KKGILVRNLNALEELGKVDYLCSDKTGTL 251
Query: 241 TCNSMEFVKCSVAGVAYG 258
T N M + G
Sbjct: 252 TKNKMTLQGVYIDGGKED 269
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 119 bits (301), Expect = 4e-28
Identities = 58/216 (26%), Positives = 81/216 (37%), Gaps = 61/216 (28%)
Query: 343 EETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVL 402
+ +Y + P E A + +A VG G N+ Y++L V
Sbjct: 274 LVACDNNYLSGDPMEKALLKSAELVGKADKG-------------------NKEYKILDVF 314
Query: 403 EFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRT 462
F+S KRMSV+V P+ LL KGA + ER + + + A GLR
Sbjct: 315 PFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCNNYEE--------KYLELARQGLRV 366
Query: 463 LVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQK 522
L A +EL E DL LG ED L+
Sbjct: 367 LAFASKEL----------------------------------EDDLEFLGLITFEDPLRP 392
Query: 523 GVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558
E I++L AGIKV ++TGD + TA I +
Sbjct: 393 DAKETIEELKAAGIKVVMITGDNVLTAKAIAKELGI 428
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 5e-25
Identities = 100/484 (20%), Positives = 171/484 (35%), Gaps = 110/484 (22%)
Query: 227 GQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDA 286
G++D DKTGTLT + ++ + GV
Sbjct: 446 GKIDVCCFDKTGTLTEDGLD-----LRGVQ------------------------------ 470
Query: 287 PGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETG 346
G S + V E S + LA CH+ + G
Sbjct: 471 ----------GLSGNQEFLKI--------VTEDSSLKPSITHKALATCHSLTKLEGKLVG 512
Query: 347 EISYEAESPDEAAFVIAAREVGFQFFGSSQT---SISLHE--LDPVSGQKVNRVYELLHV 401
+ P + F+ G + + L V + ++
Sbjct: 513 D-------PLDKKM--------FEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRR 557
Query: 402 LEFTSSRKRMSVMVRNP-ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGL 460
+F+S+ +RMSV+V E KGA + S + ++ + + Y G
Sbjct: 558 FQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP--ETVPSDYQEVLKSYTREGY 615
Query: 461 RTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKL 520
R L +AY+EL + +K R+A+ E +L LG E+ L
Sbjct: 616 RVLALAYKELPKLT---LQK-AQDLS------RDAV--------ESNLTFLGFIVFENPL 657
Query: 521 QKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEK 580
+ E I +L +A I+ ++TGD TA+++ C ++ I+ EA
Sbjct: 658 KPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILA-------EAEPP 710
Query: 581 QGDKENITK-VSLESVTK---QIREGISQVNSAKESKV--TFGLVIDGKSLDFALDKKLE 634
+ K N K ++S+ Q+ + E + + L + GK+ L
Sbjct: 711 ESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFA-VLQAHSP 769
Query: 635 KMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS 694
++ L L + R +P QK + L++ T GDGAND G L++AD+G+ +S
Sbjct: 770 ELLLRLLSHTT--VFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLS 827
Query: 695 GVEG 698
E
Sbjct: 828 EAEA 831
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 1e-21
Identities = 115/486 (23%), Positives = 176/486 (36%), Gaps = 121/486 (24%)
Query: 224 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ 283
E LG I SDKTGTLT N M SV V + +L F V +
Sbjct: 284 ETLGCTTVICSDKTGTLTTNQM-----SVCKVV---ALDPSSSSL------NEFCVTGTT 329
Query: 284 TDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNE 343
+ I + V +++ + A+C+ + D NE
Sbjct: 330 -------------------YAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNE 370
Query: 344 ETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLE 403
G E EAA + ++G + +S L N ++ L LE
Sbjct: 371 RKGVYEKVGE-ATEAALKVLVEKMGLPATKNGVSSKRRPALG--CNSVWNDKFKKLATLE 427
Query: 404 FTSSRKRMSVMVRNPENQLLLLCKGADSVMFER----LSKHGQ------QFEAETRRHIN 453
F+ RK MSV+ + P L KGA + ER L+ G+ + + I
Sbjct: 428 FSRDRKSMSVLCK-PSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIK 486
Query: 454 RYAEA-GLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLG 512
LR L +A++++ + + SD + E IE DL +G
Sbjct: 487 EMGTTKALRCLALAFKDIP-----------DPREEDLLSD-----PANFEAIESDLTFIG 530
Query: 513 ATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDS 572
+ D + V + I+K AGI+V ++TGD ETA I C R+ I + S
Sbjct: 531 VVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAI---C---RR------IGIFS 578
Query: 573 PDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKK 632
PD E++T S RE ++ AK+ V+ F+
Sbjct: 579 PD----------EDVTFKSFTG-----RE-FDEMGPAKQRAACRSAVL------FS---- 612
Query: 633 LEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVG 692
R P K+ + L++ G+ GDG ND L++ADIG+
Sbjct: 613 ------------------RVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIA 654
Query: 693 I-SGVE 697
+ SG E
Sbjct: 655 MGSGTE 660
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 91.0 bits (226), Expect = 2e-18
Identities = 76/349 (21%), Positives = 124/349 (35%), Gaps = 112/349 (32%)
Query: 224 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ 283
E +G I SDKTGTLT N VM+ V+ + GE+ F V D
Sbjct: 373 ETMGSATAICSDKTGTLTQN----------------VMSVVQGYI----GEQRFNVRDVL 412
Query: 284 TDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNE 343
+ P K V+
Sbjct: 413 RNVP----------KHVRN----------------------------------------- 421
Query: 344 ETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVY---ELLH 400
I E S + ++ + R F GS +T +L + + + V +++
Sbjct: 422 ----ILVEGISLNSSSEEVVDRGGKRAFIGS-KTECALLDFGLLLLRDYQEVRAEEKVVK 476
Query: 401 VLEFTSSRKRMSVMVRNPENQLLLLCKGADSVM----FERLSKHGQQFE------AETRR 450
+ F S RK MSV+V++ + KGA ++ +RL +G+
Sbjct: 477 IYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCAD 536
Query: 451 HINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLIL 510
I A LRT+ +AYR+ +E+ + + L L
Sbjct: 537 VIEPLASDALRTICLAYRDFAPEEFPRKDYP-----------------------NKGLTL 573
Query: 511 LGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559
+G ++D L+ GV E + + +AGI V ++TGD ++TA I C +L
Sbjct: 574 IGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGIL 622
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 7e-14
Identities = 88/482 (18%), Positives = 151/482 (31%), Gaps = 170/482 (35%)
Query: 224 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ 283
E LG V+ I SDKTGTLT N M K + D
Sbjct: 319 ETLGSVNVICSDKTGTLTKNHMTVTKI--------------------------WTSDGLH 352
Query: 284 TDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNE 343
T + N E I++G ++ ++ + + +C+ A
Sbjct: 353 TMLNAV------------SLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAK--FRN 398
Query: 344 ETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLE 403
E + +P + A + + G D + RV E+
Sbjct: 399 EADTL---LGNPTDVALIELLMKFGLD--------------DL--RETYIRVAEV----P 435
Query: 404 FTSSRKRMSVMVRNPENQ-LLLLCKGADSVMFER----LSKHGQQ--FEAETRRHINR-- 454
F+S RK M+V + +++ + KGA + + K G+ + R I
Sbjct: 436 FSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEA 495
Query: 455 --YAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERD-LILL 511
A AGLR + A E+ L L
Sbjct: 496 AEMASAGLRVIAFAS-----------------------------------GPEKGQLTFL 520
Query: 512 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLD 571
G + D + GV E + L G+++ ++TGD ETA++I +++ +
Sbjct: 521 GLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIA----------RRLGMPSK 570
Query: 572 SPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK 631
+ G+K + Q+ + + +V
Sbjct: 571 TSQ----SVSGEKLDAMDDQ------QLSQIVPKVA------------------------ 596
Query: 632 KLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGV 691
+ R+SP+ K + + ++ G GDG ND L+ ADIGV
Sbjct: 597 ----------------VFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGV 640
Query: 692 GI 693
+
Sbjct: 641 AM 642
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 70.4 bits (172), Expect = 3e-12
Identities = 96/500 (19%), Positives = 165/500 (33%), Gaps = 107/500 (21%)
Query: 224 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVER---TLAKRKGERTFEVD 280
E LG V+ I SDKTGT+T M + + + + G F
Sbjct: 354 EALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPY 413
Query: 281 DSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPD 340
+ + + F+D + + D+ K A+ + A
Sbjct: 414 EYSHNEAADQDILK---------EFKD-ELKEIDLPEDIDMDLFIKLLETAALANIATVF 463
Query: 341 VNEETGEISYEAESPDEAAFVIAAR-----------EVGFQFFGSSQTSISLHELDPVSG 389
++ T + + A V A + E + + Q+S+S H P S
Sbjct: 464 KDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSA 523
Query: 390 QKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLL-LLCKGADSVMFERLSK-HGQQFEAE 447
Q +E + F S KRM+ + + + + KGA + E S +G+
Sbjct: 524 Q-----FEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKI 578
Query: 448 T----------RRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALV 497
+ ++ A GLR L A + + + + + + T +R
Sbjct: 579 SPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKAD--NNDDQL----KNETLNRAT-- 630
Query: 498 ASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACS 557
E DL LG + D + ++K QAGI V +LTGD ETA I
Sbjct: 631 ------AESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVG 684
Query: 558 LLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFG 617
++ I M+++ G SQ ++ + +V
Sbjct: 685 IIPPNF----IHDRDEIMDSMVMTG---------------------SQFDALSDEEVD-- 717
Query: 618 LVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 677
DL C ++ R +P+ K + + GDG
Sbjct: 718 ---------------------DLKALC--LVIARCAPQTKVKMIEALHRRKAFCAMTGDG 754
Query: 678 ANDVGMLQEADIGV--GISG 695
ND L+ A++G+ GI+G
Sbjct: 755 VNDSPSLKMANVGIAMGING 774
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 61.9 bits (151), Expect = 9e-12
Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 20/109 (18%)
Query: 332 AICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQK 391
A+C+ A NEE + P E+A ++ A ++G I + EL
Sbjct: 1 ALCNDAKFGENEEKNGGEIIGD-PTESALLVFAEKLG----------IDVEELR------ 43
Query: 392 VNRVYELLHVLEFTSSRKRMSVMVRNP-ENQLLLLCKGADSVMFERLSK 439
Y + + F S RKRMS + + ++ L KGA + ER S
Sbjct: 44 --ARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAPERILERCST 90
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 4e-08
Identities = 28/144 (19%), Positives = 48/144 (33%), Gaps = 24/144 (16%)
Query: 641 AIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 700
A + + R SP+QK + ++ G GDG ND L++AD+G+ +
Sbjct: 423 AKELGIDVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAMG------ 476
Query: 701 AVMSSDYAIAQFRFLERLLLV-HGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSG 759
A ++D + + V G R+I I N+ + Y
Sbjct: 477 AKAAADIVLLDDDLSAIVKAVKEG----RKIFSNI----KSNIFWAIA---YNLILIPLA 525
Query: 760 RPAYNDWYMSCYNVFFTSLPVIAL 783
+ L +AL
Sbjct: 526 LLLI------VIILLLPMLAALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 5e-08
Identities = 46/153 (30%), Positives = 69/153 (45%), Gaps = 32/153 (20%)
Query: 402 LEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQ------FEAETRRHINRY 455
L F R+R+SV+V + + Q LL+CKGA M ++ H + + R +
Sbjct: 445 LPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLA-VATHVRDGDTVRPLDEARRERLLAL 503
Query: 456 AEA----GLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILL 511
AEA G R L++A RE+ E +A+ S T+D ERDL++
Sbjct: 504 AEAYNADGFRVLLVATREIPGGE--------SRAQYS-TAD------------ERDLVIR 542
Query: 512 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGD 544
G D ++ I L + G+ V VLTGD
Sbjct: 543 GFLTFLDPPKESAAPAIAALRENGVAVKVLTGD 575
|
Length = 903 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 1e-07
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 42/155 (27%)
Query: 404 FTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLS-----KHG-------QQFEAETRRH 451
F R+RMSV+V L+CKGA + E L+ +H +R
Sbjct: 449 FDFERRRMSVVVAENTEHHQLICKGA---LEEILNVCSQVRHNGEIVPLDDIMLRRIKRV 505
Query: 452 INRYAEAGLRTLVIAYREL--GEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLI 509
+ GLR + +A + L E +Y+ + E DLI
Sbjct: 506 TDTLNRQGLRVVAVATKYLPAREGDYQRAD-------------------------ESDLI 540
Query: 510 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGD 544
L G A D ++ + L +G+ V +LTGD
Sbjct: 541 LEGYIAFLDPPKETTAPALKALKASGVTVKILTGD 575
|
Length = 902 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 1e-06
Identities = 76/303 (25%), Positives = 127/303 (41%), Gaps = 57/303 (18%)
Query: 404 FTSSRK-RMSV--MVRNPENQLLLLCKGADSVMFERLSK---HGQQ--FEAETRRHI-NR 454
F S+ K ++S+ + + LL+ KGA + ER S HG++ + E + N
Sbjct: 456 FNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNA 515
Query: 455 YAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGAT 514
Y E G + R LG + +++F + T D +L +G
Sbjct: 516 YLELG----GLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTD--------NLCFVGLI 563
Query: 515 AVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPD 574
++ D + VP+ + K AGIKV ++TGD TA I ++ S
Sbjct: 564 SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII------------SEG 611
Query: 575 MEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLE 634
E +E + NI +SQVN +++K V+ G L ++L+
Sbjct: 612 NETVEDIAARLNIP--------------VSQVNP-RDAKAC---VVHGSDLKDMTSEQLD 653
Query: 635 KMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGV--G 692
++ ++ R+SP+QK ++ + G GDG ND L++ADIGV G
Sbjct: 654 EILKYHT----EIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMG 709
Query: 693 ISG 695
I+G
Sbjct: 710 IAG 712
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 1e-06
Identities = 66/305 (21%), Positives = 103/305 (33%), Gaps = 98/305 (32%)
Query: 402 LEFTSSRKRMSVMVRNPENQLLLLCKGADSVMF---------ERLSKHGQQFEAETRRHI 452
+ F R+R+SV+V N L+CKGA M + + ++E +
Sbjct: 412 IPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMT 471
Query: 453 NRYAEAGLRTLVIAYREL--GEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLIL 510
G+R + +A + L GE ++ + E LI+
Sbjct: 472 AEMNRQGIRVIAVATKTLKVGEADFTKTD-------------------------EEQLII 506
Query: 511 LGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITL 570
G D ++ E I L + GI V VLT
Sbjct: 507 EGFLGFLDPPKESTKEAIAALFKNGINVKVLT---------------------------- 538
Query: 571 DSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALD 630
GD E +T + V GI + G I+ S D L
Sbjct: 539 -----------GDNEIVTARICQEV------GIDA------NDFLLGADIEELS-DEELA 574
Query: 631 KKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIG 690
++L K I R +P QK+ + L+K G T +GDG ND L++AD+G
Sbjct: 575 RELRK----------YHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVG 624
Query: 691 VGISG 695
+ +
Sbjct: 625 ISVDT 629
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 2e-04
Identities = 18/60 (30%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 652 SSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGM--QAVMSSDYAI 709
+ P+ KA + R +K + + +G+GAND+ L+EAD+G+ EG+ + ++++D +
Sbjct: 77 ADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVL 136
|
Length = 152 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 3e-04
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 651 RSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIG--VGISGVEGMQAVMSSDYA 708
RSSP K L+ ++K G+ GDG ND L+ AD+G +GISG E A +SD
Sbjct: 654 RSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTE--VAKEASDII 711
Query: 709 IA--QFRFLERLLLVHGHWCYRRISMMICYFFYKNLT 743
+ F + R + W R + I F LT
Sbjct: 712 LLDDNFASIVRAVK----WG-RNVYDNIRKFLQFQLT 743
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 7e-04
Identities = 32/168 (19%), Positives = 65/168 (38%), Gaps = 26/168 (15%)
Query: 524 VPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGD 583
V E I+ L + + + + T D ++ + +K V+ +D ++ +
Sbjct: 84 VKEIIEYLKENNLSILLYTDDGAYILNDVSEKIVREERYVKSFVLVIDDFELL------E 137
Query: 584 KENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAID 643
E+I K+ + + + + E ++ S +T S L+ + +
Sbjct: 138 DEDINKILIVTDPEDLDELEKELKELFGSLITIT-----SSGPGYLE------IMPKGVS 186
Query: 644 CASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGV 691
+ + KAL L + +A GDG ND+ ML+ A +GV
Sbjct: 187 KGTAL--------KALAKHL-GIDLEEVIAFGDGENDIEMLELAGLGV 225
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 8e-04
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Query: 471 GEDEYRIWEKEFLKAKTSVTSDREALVASAAEK------IERDLILLGATAVEDKLQKGV 524
G +E RI FL+ S L+ + + D LLG A+ D+L+
Sbjct: 330 GGEEVRIGNPRFLELAIEPISASPDLLNEGESQGKTVVFVAVDGELLGVIALRDQLRPEA 389
Query: 525 PECIDKLAQAG-IKVWVLTGDKMETA 549
E I L +AG IK+ +LTGD A
Sbjct: 390 KEAIAALKRAGGIKLVMLTGDNRSAA 415
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 0.002
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 510 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETA 549
L+G A+ D+L+ E I L GIKV +LTGD TA
Sbjct: 528 LVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTA 567
|
Length = 713 |
| >gnl|CDD|234684 PRK00192, PRK00192, mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.002
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 657 KALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEG 698
+ L + G T+A+GD ND+ ML+ ADI V + G +G
Sbjct: 196 RWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDG 237
|
Length = 273 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1000 | |||
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.84 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.53 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.48 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.45 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.24 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.06 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.98 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.96 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.9 | |
| PLN02887 | 580 | hydrolase family protein | 98.86 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.82 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.78 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.78 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.76 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.74 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.74 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.72 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.69 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.68 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.66 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.58 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 98.53 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.42 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.4 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.36 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.35 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.33 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.32 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.29 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.29 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.2 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.19 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.15 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.15 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.1 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.08 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.08 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.07 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.07 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.04 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.01 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.96 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.95 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 97.87 | |
| PLN02954 | 224 | phosphoserine phosphatase | 97.84 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.7 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.67 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.64 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.59 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.56 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.55 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.5 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.49 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.39 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.27 | |
| PLN02423 | 245 | phosphomannomutase | 97.27 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.24 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.2 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.11 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.02 | |
| PLN02580 | 384 | trehalose-phosphatase | 97.02 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.97 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.97 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.94 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 96.87 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.83 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.74 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.71 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.6 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.55 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.54 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.53 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.46 | |
| PLN03017 | 366 | trehalose-phosphatase | 96.41 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.39 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.34 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.33 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.24 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.12 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.09 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.08 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 95.95 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 95.93 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 95.9 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 95.57 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 95.51 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.5 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.46 | |
| PLN02940 | 382 | riboflavin kinase | 95.43 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.31 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.27 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.21 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.19 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 94.98 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 94.94 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 94.78 | |
| PLN02151 | 354 | trehalose-phosphatase | 94.75 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 94.7 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 94.57 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 94.51 | |
| PLN02811 | 220 | hydrolase | 94.47 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 94.1 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 94.09 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 93.68 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 93.07 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 93.05 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 93.02 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 92.83 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 92.75 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 92.21 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 91.68 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 91.42 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 91.34 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 91.16 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 90.16 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 89.73 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 89.44 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 89.28 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 89.26 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 88.45 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 88.44 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 87.16 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 85.9 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 85.69 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 85.29 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 85.21 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 84.78 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 84.26 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 83.06 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 82.99 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 82.17 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 80.32 |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-162 Score=1448.61 Aligned_cols=929 Identities=57% Similarity=0.973 Sum_probs=833.4
Q ss_pred CCCCCccccccccccchhccCCChhhhccceeEEEecCCCCCcceEEEEEEECCccccCCCCCeEEeceeecCCCeEEEE
Q 001888 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGV 80 (1000)
Q Consensus 1 ~~lDGet~lk~k~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~l~~F~G~~~~~~~~~~l~~~n~l~~Gs~l~~tg~~~g~ 80 (1000)
+|||||||||.|+++..+......+.+..++|.|+||.||+++|.|+|.+...++..|++++|+++|||+++||.|++|+
T Consensus 169 ~nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~ 248 (1151)
T KOG0206|consen 169 ANLDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGV 248 (1151)
T ss_pred eecCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEE
Confidence 69999999999999999987545666788999999999999999999999988777799999999999999999999999
Q ss_pred EEEecchhhHhhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccCCC
Q 001888 81 VVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPR 160 (1000)
Q Consensus 81 Vv~tG~~Tki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (1000)
|++||++||+|+|..+++.|+|++++.+|+.+..++++++++|++++++..+|......... ..||+..+.
T Consensus 249 vv~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~-------- 319 (1151)
T KOG0206|consen 249 VVFTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNG-EWWYLSPSE-------- 319 (1151)
T ss_pred EEEcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccC-chhhhcCch--------
Confidence 99999999999999999999999999999999999999999999999999988764422111 367775532
Q ss_pred CchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccccccCCCcceeccccccccccceeEEEEcCCCcc
Q 001888 161 RAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTL 240 (1000)
Q Consensus 161 ~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTL 240 (1000)
+....+..|++++++++.+||+||++++|+++++|+.+|++|.+||+++.+.++.+|+++++|+||||+||++||||||
T Consensus 320 -~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTL 398 (1151)
T KOG0206|consen 320 -AAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTL 398 (1151)
T ss_pred -HHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCcc
Confidence 3446688999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCCC
Q 001888 241 TCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPH 320 (1000)
Q Consensus 241 T~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 320 (1000)
|+|.|.|++|+++|..|+...++.+....++.+ ... +....+++.|.|+.++++.+...++
T Consensus 399 T~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~------------------~~~-~~~~~~~~~f~~~~~~~~~~~~~~~ 459 (1151)
T KOG0206|consen 399 TQNSMEFKKCSINGTSYGRNVTEVEAALAKRSG------------------GDV-NEHKIKGFTFEDSRLVDGLWSSEPQ 459 (1151)
T ss_pred ccceeeeecccccCcccccCCChhhcccCcccc------------------ccc-cccccccceeccchhhccccccccC
Confidence 999999999999999998765442211111100 000 1134567888999998888887788
Q ss_pred hHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEE
Q 001888 321 SDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLH 400 (1000)
Q Consensus 321 ~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~ 400 (1000)
....++|++++|+||++.++.+++.+.+.|++.||||.||+++|+++|+.+..|+++.+++...+. .+.|++++
T Consensus 460 ~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~------~~~y~lL~ 533 (1151)
T KOG0206|consen 460 AEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGV------EETYELLN 533 (1151)
T ss_pred cchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEecccc------ceeEEEEE
Confidence 889999999999999999998766668999999999999999999999999999999999996654 78999999
Q ss_pred eeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHH
Q 001888 401 VLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEK 480 (1000)
Q Consensus 401 ~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~ 480 (1000)
++||+|.|||||||||+|+|++.+||||||.+|++++...+....++..+|+++|+.+|+||||+|||+++++||.+|.+
T Consensus 534 iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~ 613 (1151)
T KOG0206|consen 534 VLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNE 613 (1151)
T ss_pred EeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999887788999999999999999999999999999999999999
Q ss_pred HHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccc
Q 001888 481 EFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 560 (1000)
Q Consensus 481 ~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 560 (1000)
+|++|++++ .||++.+++.++.+|+||+++|.+++||+||+||||+|+.|++||||+||+|||+.|||++||.+|+++.
T Consensus 614 ~~~~A~ts~-~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~ 692 (1151)
T KOG0206|consen 614 RYNEAKTSL-TDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLR 692 (1151)
T ss_pred HHHHHHhhc-cCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCC
Confidence 999999999 6999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHH
Q 001888 561 QEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDL 640 (1000)
Q Consensus 561 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~ 640 (1000)
+++..+.++..+.+... ..+... ...+.+..++............. ...++++||+++.+.++++.+..|..+
T Consensus 693 ~~m~~i~i~~~~~~~~~-----~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~-~~~aLVIDGktl~~aL~~~~~~~Fl~l 765 (1151)
T KOG0206|consen 693 QDMKLIIINTETSEELS-----SLDATA-ALKETLLRKFTEELEEAKLEHSE-KPFALVIDGKTLAYALEDELRKKFLEL 765 (1151)
T ss_pred CCceEEEEecCChhhhc-----chhhHH-HHHHHHHHhhhHHHHHHhhccCc-CCceEEEECHHHHhhhCchhhHHHHHH
Confidence 99999999887644111 111111 22233333332222221111111 468999999999999999888999999
Q ss_pred HhhcCceEEEcCChhhHHHHHHHH-hcCCCEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchhhhHHHH
Q 001888 641 AIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 641 ~~~~~~vi~~r~sp~qK~~iV~~l-~~~~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
+..|++|+|||++|.||+.+|+++ +..+..++|||||+||++||++||||||++|.||.||..+|||.+.+|++|.+||
T Consensus 766 a~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLL 845 (1151)
T KOG0206|consen 766 AKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLL 845 (1151)
T ss_pred HHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhh
Confidence 999999999999999999999999 5788999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCc
Q 001888 720 LVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYP 799 (1000)
Q Consensus 720 l~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~fs~~~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P 799 (1000)
++||||+|.|+++++.|+||||+.+++++|||.++++|||++++++|++.+||++||++|++++|++|+|++++.++++|
T Consensus 846 LVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P 925 (1151)
T KOG0206|consen 846 LVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFP 925 (1151)
T ss_pred eeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhccccCCccchhhHHHhhHHHHHHHHHHHHHHHhhhccccccCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhcch
Q 001888 800 LLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFT 879 (1000)
Q Consensus 800 ~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 879 (1000)
+||+.++++..++++.|+.|++.|+++++++|++++..+.......+|.+.+++.+|+.+||++++++++++++.+++|+
T Consensus 926 ~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~ywT 1005 (1151)
T KOG0206|consen 926 ELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSYWT 1005 (1151)
T ss_pred cchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehhee
Confidence 99999999999999999999999999999999999988876667788999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCCch-hhHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHH
Q 001888 880 WIQHFFIWGSIALWYIFLVVYGSLPPTFST-TAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMYHDLI 958 (1000)
Q Consensus 880 ~~~~~~~~~si~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~w~~~i~~~~~~ll~~~i~k~~~~~~~p~~~~~~ 958 (1000)
|++++.+|+|+++|+++.++|...++.+.. ..+.+.+...+.+|.+|+.++++++++++|+++++.+++.++|+..+++
T Consensus 1006 ~i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i 1085 (1151)
T KOG0206|consen 1006 WINHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDII 1085 (1151)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHH
Confidence 999999999999999999999864433333 4455577789999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcccccc
Q 001888 959 QRQRLEGSETEISS 972 (1000)
Q Consensus 959 ~~~~~~~~~~~~~~ 972 (1000)
|++++...+....+
T Consensus 1086 ~~~~~~~~~~~~~~ 1099 (1151)
T KOG0206|consen 1086 QEIEKYRRRASDSR 1099 (1151)
T ss_pred HHHHhccccccccc
Confidence 99997555444444
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-148 Score=1383.16 Aligned_cols=918 Identities=37% Similarity=0.606 Sum_probs=767.3
Q ss_pred CCCCCccccccccccchhccCCChhhhccceeEEEecCCCCCcceEEEEEEECCccccCCCCCeEEeceeecCCCeEEEE
Q 001888 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGV 80 (1000)
Q Consensus 1 ~~lDGet~lk~k~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~l~~F~G~~~~~~~~~~l~~~n~l~~Gs~l~~tg~~~g~ 80 (1000)
++||||||||.|++...+... ......++|.|+||.||+++|+|+|++.++|+.+|++.+|+++|||+++||+|++|+
T Consensus 224 s~LdGEt~~k~k~~~~~~~~~--~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~Gv 301 (1178)
T PLN03190 224 INLDGESNLKTRYAKQETLSK--IPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGV 301 (1178)
T ss_pred cccCCeeeeeEecccchhhhc--chhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEE
Confidence 689999999999998876532 123356789999999999999999999999999999999999999999999999999
Q ss_pred EEEecchhhHhhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCcc-----
Q 001888 81 VVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATV----- 155 (1000)
Q Consensus 81 Vv~tG~~Tki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 155 (1000)
|||||+|||+++|..+++.|+|++|+.+|+++.+++++++++|++++++..+|.....+ ..||+.+.....
T Consensus 302 VVYTG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~----~~~yl~~~~~~~~~~~~ 377 (1178)
T PLN03190 302 AVYCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRD----ELDTIPFYRRKDFSEGG 377 (1178)
T ss_pred EEEechhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccc----ccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999887777543222 244443321100
Q ss_pred --ccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccccccCCCcceeccccccccccceeEEE
Q 001888 156 --FYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTIL 233 (1000)
Q Consensus 156 --~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~ 233 (1000)
.++........+..|++++++++.+||+||++++|+++++|+++|+||.+||++..+.++.||+++++|+||+|+|||
T Consensus 378 ~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIf 457 (1178)
T PLN03190 378 PKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVF 457 (1178)
T ss_pred ccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEE
Confidence 000001112346678889999999999999999999999999999999999999989999999999999999999999
Q ss_pred EcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCCCCccccCCCcc-CCcccCchhhhc
Q 001888 234 SDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSV-KGFNFRDERIMN 312 (1000)
Q Consensus 234 sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~ 312 (1000)
||||||||+|+|+|++|+++|..|+.+....+.... ......+ +.... ....+.++.+.+
T Consensus 458 SDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~-~~~~~~~------------------~~~~~~~~~~~~~~~~~~ 518 (1178)
T PLN03190 458 SDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHA-GYSVEVD------------------GKILRPKMKVKVDPQLLE 518 (1178)
T ss_pred EcCCCccccceEEEEEEEECCEEcccccccchhhhh-ccccccc------------------cccccccccccCCHHHHh
Confidence 999999999999999999999999753211100000 0000000 00000 000112222222
Q ss_pred ccC--CCCCChHHHHHHHHHHhhhcceeeccCCC--C---CceEEeeCChhHHHHHHHHHHcCcEEEeecCCeeEEEecC
Q 001888 313 GQW--VNEPHSDVIQKFFRVLAICHTAIPDVNEE--T---GEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELD 385 (1000)
Q Consensus 313 ~~~--~~~~~~~~~~~~~~~l~lC~~~~~~~~~~--~---~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~ 385 (1000)
... ...+..+.+.+|++++++||++.++..++ + +..+|+|+||||.||+++|+++|+.+..|+++.+.+...+
T Consensus 519 ~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~ 598 (1178)
T PLN03190 519 LSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHG 598 (1178)
T ss_pred hhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeecc
Confidence 111 01122345788999999999999853211 1 2467999999999999999999999999999999998887
Q ss_pred CCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhcc-ChhhHHHHHHHHHHHHHccceEEE
Q 001888 386 PVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH-GQQFEAETRRHINRYAEAGLRTLV 464 (1000)
Q Consensus 386 ~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~G~r~l~ 464 (1000)
. ...|++++++||+|+|||||||++++++++++|+||||++|+++|+.. +.+.++++.+++++|+++|+|||+
T Consensus 599 ~------~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~ 672 (1178)
T PLN03190 599 E------RQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLV 672 (1178)
T ss_pred c------eecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEE
Confidence 6 889999999999999999999999988889999999999999999754 335678889999999999999999
Q ss_pred EEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCC
Q 001888 465 IAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGD 544 (1000)
Q Consensus 465 ~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD 544 (1000)
+|||+++++++.+|.++|++|+.++ .+|++.+++..+++|+||+++|+++++|++|++++++|+.|++|||++||+|||
T Consensus 673 lA~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD 751 (1178)
T PLN03190 673 VGMRELNDSEFEQWHFSFEAASTAL-IGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGD 751 (1178)
T ss_pred EEEEeCCHHHHhhHHHHHHHhhhhh-hhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCC
Confidence 9999999999999999999999988 899999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHh---hhhh-hcccccCccceEEEE
Q 001888 545 KMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIRE---GISQ-VNSAKESKVTFGLVI 620 (1000)
Q Consensus 545 ~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~lvi 620 (1000)
+.+||++||++|||+.++...+.++.+..+.. .+.+....... ..... ..+. ...........++++
T Consensus 752 ~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~-------~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lVI 822 (1178)
T PLN03190 752 KQETAISIGYSSKLLTNKMTQIIINSNSKESC-------RKSLEDALVMS--KKLTTVSGISQNTGGSSAAASDPVALII 822 (1178)
T ss_pred CHHHHHHHHHHhCCCCCCCeeEEecCCchhhH-------HHHHHHHhhhh--hhccccccccccccccccccCCceEEEE
Confidence 99999999999999999887777766532211 00011000000 00000 0000 000111234578999
Q ss_pred eccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcC-CCEEEEEcCCccChHHhhhcCccccccCcccc
Q 001888 621 DGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGT-GKTTLAIGDGANDVGMLQEADIGVGISGVEGM 699 (1000)
Q Consensus 621 ~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~-~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~ 699 (1000)
+|.+++.++++++.+.|.+++..|++|||||++|.||+++|+.+|+. +++|+|||||+||++||++||||||++|+||.
T Consensus 823 dG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~ 902 (1178)
T PLN03190 823 DGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGR 902 (1178)
T ss_pred EcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhH
Confidence 99999999988888899999999999999999999999999999665 68999999999999999999999999999999
Q ss_pred chhccCcEEecchhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHH
Q 001888 700 QAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLP 779 (1000)
Q Consensus 700 ~ak~~aD~vl~~f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~fs~~~~~~~~~ll~~n~~~~~~p 779 (1000)
||+.+|||++.+|++|.+||++|||++|+|++++++|+||||+++++++|||+++++|||+++|++|.+++||++||++|
T Consensus 903 qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslP 982 (1178)
T PLN03190 903 QAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALP 982 (1178)
T ss_pred HHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcccCCChhhhhcCccchhccccCCccchhhHHHhhHHHHHHHHHHHHHHHhhhccccccCCCcccchhhhhHHH
Q 001888 780 VIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAM 859 (1000)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 859 (1000)
++++|++|+|++++.++++|+||+.++++..++.+.|+.|++.|++||+++|+++++.+.... .+.+.++.+.
T Consensus 983 ii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~~~~~~~~-------~~~~~~~~~~ 1055 (1178)
T PLN03190 983 TIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLFAYWAST-------IDGSSIGDLW 1055 (1178)
T ss_pred HHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-------cCceeEhHhh
Confidence 999999999999999999999999999999999999999999999999999999887765321 1233467788
Q ss_pred HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHhccHHHHHHHHHHHHHHHHH
Q 001888 860 YSSVVWAVNCQMALSINYFTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLP 939 (1000)
Q Consensus 860 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~~~~~~ll~ 939 (1000)
++++++++|+++++.+++|+|+++..+|+|+++++++.+++..+|. +.. |+.+ ..++.+|.||+.++++++++++|
T Consensus 1056 ~~~~v~~vnl~i~~~~~~wt~~~~~~i~~Si~~~~i~~~~~~~~~~-~~~--~~~~-~~~~~~~~fwl~ill~~~~~l~p 1131 (1178)
T PLN03190 1056 TLAVVILVNLHLAMDIIRWNWITHAAIWGSIVATFICVIVIDAIPT-LPG--YWAI-FHIAKTGSFWLCLLAIVVAALLP 1131 (1178)
T ss_pred hhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhccc-chh--HHHH-HHHhccHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999888887763 222 4433 36678999999999999999999
Q ss_pred HHHHHHHHhhcCCChHHHHHHHHHhcCcccc
Q 001888 940 YFLYRAFQTRFRPMYHDLIQRQRLEGSETEI 970 (1000)
Q Consensus 940 ~~i~k~~~~~~~p~~~~~~~~~~~~~~~~~~ 970 (1000)
+++++++++.|+|+.++++|+.++.+..++.
T Consensus 1132 ~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~ 1162 (1178)
T PLN03190 1132 RFVVKVLYQYFTPCDVQIAREAEKFGTFRES 1162 (1178)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhcccccc
Confidence 9999999999999999999987766555544
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-141 Score=1336.04 Aligned_cols=914 Identities=53% Similarity=0.881 Sum_probs=781.1
Q ss_pred CCCCCccccccccccchhccCCChhhhccceeEEEecCCCCCcceEEEEEEECC-ccccCCCCCeEEeceeecCCCeEEE
Q 001888 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEG-KQYPLSPQQILLRDSKLKNTDYVYG 79 (1000)
Q Consensus 1 ~~lDGet~lk~k~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~l~~F~G~~~~~~-~~~~l~~~n~l~~Gs~l~~tg~~~g 79 (1000)
|+|||||++|.|+|++.+........+..++|.|+||.||+++|+|.|++.+++ +..|++.+|+++|||.|+||||++|
T Consensus 139 s~l~GEs~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~g 218 (1057)
T TIGR01652 139 ANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIG 218 (1057)
T ss_pred eccCCeecceEeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEE
Confidence 689999999999999888765555667788999999999999999999999988 8899999999999999999999999
Q ss_pred EEEEecchhhHhhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccCC
Q 001888 80 VVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDP 159 (1000)
Q Consensus 80 ~Vv~tG~~Tki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (1000)
+|+|||++||+++|..+++.|+|++|+.+|+++.+++++++++|++++++..+|...... ..||+..+.. .
T Consensus 219 vVvyTG~~Tk~~~n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~----~~~yl~~~~~-----~ 289 (1057)
T TIGR01652 219 VVVYTGHDTKLMRNATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGK----DLWYIRLDVS-----E 289 (1057)
T ss_pred EEEEEchhhhhhhcCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCC----CccceecCcc-----c
Confidence 999999999999999999999999999999999999999999999998887676543221 2688864321 2
Q ss_pred CCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccccccCCCcceeccccccccccceeEEEEcCCCc
Q 001888 160 RRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGT 239 (1000)
Q Consensus 160 ~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGT 239 (1000)
.+.....+..|++++++++.+||+||++++++++++++++|+||.+|++++.++++.||+++++|+||+|+|||||||||
T Consensus 290 ~~~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGT 369 (1057)
T TIGR01652 290 RNAAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGT 369 (1057)
T ss_pred ccchhHHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCc
Confidence 22234556689999999999999999999999999999999999999987777889999999999999999999999999
Q ss_pred cccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCC
Q 001888 240 LTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEP 319 (1000)
Q Consensus 240 LT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 319 (1000)
||+|+|+|++|+++|..|+....+......+..+...+ .. .......+..+|.++++.+.....++
T Consensus 370 LT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~----------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (1057)
T TIGR01652 370 LTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVE----------NE----NSMLVESKGFTFVDPRLVDLLKTNKP 435 (1057)
T ss_pred eeeeeEEEEEEEECCEEecCCcchHHHHhhhccccccc----------cc----ccccccccccccCcHHHHHhhhcCCc
Confidence 99999999999999999975433221111111110000 00 00000011234555555443222333
Q ss_pred ChHHHHHHHHHHhhhcceeecc-CCCCCceEEeeCChhHHHHHHHHHHcCcEEEeecCCe--eEEEecCCCCCccccEEE
Q 001888 320 HSDVIQKFFRVLAICHTAIPDV-NEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTS--ISLHELDPVSGQKVNRVY 396 (1000)
Q Consensus 320 ~~~~~~~~~~~l~lC~~~~~~~-~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~--~~i~~~~~~~~~~~~~~~ 396 (1000)
..+.+.++++++++||++.++. ++..+.+.|+++||+|.||+++|+.+|+.+.+|+++. +.+...+. ...|
T Consensus 436 ~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~------~~~~ 509 (1057)
T TIGR01652 436 NAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGE------TKEY 509 (1057)
T ss_pred hhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCC------EEEE
Confidence 4456889999999999999875 2223457899999999999999999999999998884 44555554 7899
Q ss_pred EEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHH
Q 001888 397 ELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYR 476 (1000)
Q Consensus 397 ~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~ 476 (1000)
++++++||+|+||||||+|+++++++++|+||||++|+++|+..+++.++++.+++++|+.+|+|||++|||.++++|++
T Consensus 510 ~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~ 589 (1057)
T TIGR01652 510 EILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYE 589 (1057)
T ss_pred EEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHH
Confidence 99999999999999999999988889999999999999999865456678899999999999999999999999999999
Q ss_pred HHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHc
Q 001888 477 IWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 556 (1000)
Q Consensus 477 ~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 556 (1000)
+|.++|++|+.++ .+|++.+++.++++|+||+|+|++|+|||||++|+++|+.|++|||++||+|||+.+||++||++|
T Consensus 590 ~~~~~~~~a~~~~-~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~ 668 (1057)
T TIGR01652 590 EWNEEYNEASTAL-TDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSC 668 (1057)
T ss_pred HHHHHHHHHHhhh-hhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHh
Confidence 9999999999888 799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHH
Q 001888 557 SLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKM 636 (1000)
Q Consensus 557 gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~ 636 (1000)
|+++++...+.++++..+..... .+.+ ..+......... ......+.+++++|++++.+++++.+++
T Consensus 669 ~ii~~~~~~~~i~~~~~~~~~~~----~~~i--------~~~~~~~~~~~~-~~~~~~~~~lvi~G~~l~~~l~~~~~~~ 735 (1057)
T TIGR01652 669 RLLSRNMEQIVITSESLDATRSV----EAAI--------KFGLEGTSEEFN-NLGDSGNVALVIDGKSLGYALDEELEKE 735 (1057)
T ss_pred CCCCCCCeEEEEecCchhhhHHH----HHHH--------HHHHHHHHHhhh-hhccCCceEEEEccHHHHHHHhhHHHHH
Confidence 99998887777776543211000 0001 111111000010 1112346789999999999988888889
Q ss_pred HHHHHhhcCceEEEcCChhhHHHHHHHHhcC-CCEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchhhh
Q 001888 637 FLDLAIDCASVICCRSSPKQKALVTRLVKGT-GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFL 715 (1000)
Q Consensus 637 ~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~-~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~~l 715 (1000)
|.+++..|+++||||++|+||+++|+.+|+. |++|+|||||+||++||++||||||+.|+|+.||+.+|||++.+|++|
T Consensus 736 f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L 815 (1057)
T TIGR01652 736 FLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFL 815 (1057)
T ss_pred HHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHH
Confidence 9999999999999999999999999999776 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHhcccCCChhhh
Q 001888 716 ERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLC 795 (1000)
Q Consensus 716 ~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~fs~~~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~ 795 (1000)
.++|++|||++|+|+++++.|.||+|+++++++++|.++++|+|+++|++++++|||+++|++|++++|++|+|++++.+
T Consensus 816 ~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l 895 (1057)
T TIGR01652 816 TKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLS 895 (1057)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHH
Confidence 99988999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCccchhccccCCccchhhHHHhhHHHHHHHHHHHHHHHhhhccccccCCCcccchhhhhHHHHHHHHHHHHHHHHHHh
Q 001888 796 LKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSI 875 (1000)
Q Consensus 796 ~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 875 (1000)
+++|++|+.+++++.++.+.|+.|++.|++|++++|++.++.+.......+|...+++.+++++|+++++++++++++.+
T Consensus 896 ~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1057)
T TIGR01652 896 LRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIALEI 975 (1057)
T ss_pred HhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999888776544446788889999999999999999999999999
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChH
Q 001888 876 NYFTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMYH 955 (1000)
Q Consensus 876 ~~~~~~~~~~~~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~~~~~~ll~~~i~k~~~~~~~p~~~ 955 (1000)
++|+|+++..+|+|+++++++.+++..++. +...|+ .+..++.+|.+|+.++++++++++|+++++++++.|+|+.+
T Consensus 976 ~~wt~~~~~~~~~S~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~ 1052 (1057)
T TIGR01652 976 NRWNWISLITIWGSILVWLIFVIVYSSIFP--SPAFYK-AAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDY 1052 (1057)
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHhhcc--cccHHH-HHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 999999999999999999998888875542 334455 44477889999999999999999999999999999999999
Q ss_pred HHHHH
Q 001888 956 DLIQR 960 (1000)
Q Consensus 956 ~~~~~ 960 (1000)
++++|
T Consensus 1053 ~~i~~ 1057 (1057)
T TIGR01652 1053 DIVQE 1057 (1057)
T ss_pred HHhhC
Confidence 98863
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-130 Score=1067.88 Aligned_cols=829 Identities=33% Similarity=0.528 Sum_probs=720.7
Q ss_pred CCCCCccccccccccchhccCCChhhhccceeEEEecCCCCCcceEEEEEEEC--CccccCCCCCeEEeceeecCCCeEE
Q 001888 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYE--GKQYPLSPQQILLRDSKLKNTDYVY 78 (1000)
Q Consensus 1 ~~lDGet~lk~k~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~l~~F~G~~~~~--~~~~~l~~~n~l~~Gs~l~~tg~~~ 78 (1000)
.+|||||+||.|-|++.|+.+.+...+.+++ +..|+|++++|+|.|++++. .++.|++.+|.+|++|.+.. |.++
T Consensus 216 DQLDGETDWKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs-~t~~ 292 (1051)
T KOG0210|consen 216 DQLDGETDWKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVAS-GTAI 292 (1051)
T ss_pred cccCCcccceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEec-CcEE
Confidence 3799999999999999999988777777775 99999999999999999995 35689999999999999995 8899
Q ss_pred EEEEEecchhhHhhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccC
Q 001888 79 GVVVFTGHDTKVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYD 158 (1000)
Q Consensus 79 g~Vv~tG~~Tki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (1000)
|+|+|||.||+-+||...++.|-..++..+|-+.++++.++++++++.....++ . ..||+
T Consensus 293 gvVvYTG~dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~----~------~~wyi---------- 352 (1051)
T KOG0210|consen 293 GVVVYTGRDTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGF----G------SDWYI---------- 352 (1051)
T ss_pred EEEEEecccHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcC----C------CchHH----------
Confidence 999999999999999999999999999999999999999988888776443222 1 27887
Q ss_pred CCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccccccCCCcceeccccccccccceeEEEEcCCC
Q 001888 159 PRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTG 238 (1000)
Q Consensus 159 ~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTG 238 (1000)
.++++++|++++||+||.+.++++|++.+..|++|+++ .+..+|++++.|+||++.|+.+||||
T Consensus 353 ----------~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTG 416 (1051)
T KOG0210|consen 353 ----------YIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTG 416 (1051)
T ss_pred ----------HHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCC------CceeeecCCChHHhcceEEEEecCcC
Confidence 78999999999999999999999999999999999887 67899999999999999999999999
Q ss_pred ccccceeEEEEEEEcCeeeccchh-HHHHHHHhhcCCcccccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCC
Q 001888 239 TLTCNSMEFVKCSVAGVAYGRVMT-EVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVN 317 (1000)
Q Consensus 239 TLT~n~m~~~~~~i~~~~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 317 (1000)
|||+|+|.+++++.+-..|+.+.. +++.....-.+. ++ ...++. .....
T Consensus 417 TLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~-------------~~--------~~~~~~---------~~~~k 466 (1051)
T KOG0210|consen 417 TLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTP-------------GR--------NKGKGA---------LSRVK 466 (1051)
T ss_pred ccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCC-------------Cc--------cccccc---------chhhc
Confidence 999999999999999998876432 222222111000 00 000000 01122
Q ss_pred CCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEE
Q 001888 318 EPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYE 397 (1000)
Q Consensus 318 ~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 397 (1000)
.+.+..+++..+++|+||++.|..++ ++...|++.||||.||+++.+..|..+..|+.+.+++...+. ....|+
T Consensus 467 ~~~s~rv~~~V~alalCHNVTPv~e~-~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~-----~~~~yq 540 (1051)
T KOG0210|consen 467 KDMSARVRNAVLALALCHNVTPVFED-DGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLD-----DELNYQ 540 (1051)
T ss_pred CcccHHHHHHHHHHHHhccCCcccCC-CceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCC-----cceeEE
Confidence 34456788999999999999997754 468999999999999999999999999999999999987744 378999
Q ss_pred EEEeeCCCCCCceEEEEEEcC-CCcEEEEEccchhHhHHHHhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHH
Q 001888 398 LLHVLEFTSSRKRMSVMVRNP-ENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYR 476 (1000)
Q Consensus 398 il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~ 476 (1000)
|+.++||+|+.|||++|||++ .+++.+|.||||.+|......+ +.+++...+||++|+|||++|+|.++++|++
T Consensus 541 IL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N-----dWleEE~gNMAREGLRtLVvakK~Ls~~eye 615 (1051)
T KOG0210|consen 541 ILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN-----DWLEEECGNMAREGLRTLVVAKKVLSEEEYE 615 (1051)
T ss_pred EEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc-----hhhhhhhhhhhhhcceEEEEEecccCHHHHH
Confidence 999999999999999999987 6899999999999997766543 3567778899999999999999999999999
Q ss_pred HHHHHHHHHhhcchhhHHHHHHHHHH-hhhccceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHH
Q 001888 477 IWEKEFLKAKTSVTSDREALVASAAE-KIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA 555 (1000)
Q Consensus 477 ~~~~~~~~~~~~~~~~r~~~~~~~~~-~iE~~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~ 555 (1000)
.|.+.|+.|+.++ .||.+++.++.+ .+|+||+++|++|+||+||++|+.+++.||+||||+||+|||+.+||+.||++
T Consensus 616 ~Fe~~y~~A~lSi-~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkS 694 (1051)
T KOG0210|consen 616 AFEEAYNAAKLSI-SDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKS 694 (1051)
T ss_pred HHHHHHHhhhCcc-chHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehh
Confidence 9999999999999 899999999877 99999999999999999999999999999999999999999999999999999
Q ss_pred cCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHH
Q 001888 556 CSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEK 635 (1000)
Q Consensus 556 ~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~ 635 (1000)
.+++..++.+..+..-...... ...++ ......+.+++++|++++..++ ++++
T Consensus 695 s~L~sR~q~ihv~~~v~sr~da------h~eL~--------------------~lR~k~~~aLvi~G~Sl~~cl~-yye~ 747 (1051)
T KOG0210|consen 695 SRLFSRGQYIHVIRSVTSRGDA------HNELN--------------------NLRRKTDCALVIDGESLEFCLK-YYED 747 (1051)
T ss_pred ccceecCceEEEEEecCCchHH------HHHHH--------------------HhhcCCCcEEEEcCchHHHHHH-HHHH
Confidence 9999999988887654322110 00000 1123467899999999998776 7888
Q ss_pred HHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCCCEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchhh
Q 001888 636 MFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF 714 (1000)
Q Consensus 636 ~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~~ 714 (1000)
.|.++.+.+.+|||||++|.||+++++.+ ++.|+.|+|||||.||++||++||+|||+.|+||.||..+|||.+.+|++
T Consensus 748 Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~H 827 (1051)
T KOG0210|consen 748 EFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSH 827 (1051)
T ss_pred HHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHH
Confidence 99999999999999999999999999999 77899999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHhcccCCChhh
Q 001888 715 LERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARL 794 (1000)
Q Consensus 715 l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~fs~~~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~ 794 (1000)
+.+||++|||.+|.|..++.+|.+.+++++..++.+|.....|...++|..+.|+.|..++|.+|++.+ +.|+|++++.
T Consensus 828 v~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSl-v~d~Dv~~~~ 906 (1051)
T KOG0210|consen 828 VSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSL-VLDRDVSESL 906 (1051)
T ss_pred HHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhhee-eecccccHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 7899999999
Q ss_pred hhcCccchhccccCCccchhhHHHhhHHHHHHHHHHHHHHHhhhccccccCCCcccchhhhhHHHHHHHHHHHHHHHHHH
Q 001888 795 CLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALS 874 (1000)
Q Consensus 795 ~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~ 874 (1000)
.+.+|+||+.-.+++.++.++|+.|++.++|||.++.++.+..+.. ++.....+.|+++++...+++++.
T Consensus 907 a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~~----------ef~~ivaisFtaLi~tELiMVaLt 976 (1051)
T KOG0210|consen 907 AVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFDT----------EFIHIVAISFTALILTELIMVALT 976 (1051)
T ss_pred HhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhhh----------hheEeeeeeeHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999986665543 223456789999999999999999
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 001888 875 INYFTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMY 954 (1000)
Q Consensus 875 ~~~~~~~~~~~~~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~~~~~~ll~~~i~k~~~~~~~p~~ 954 (1000)
.++|+|.....-..++.++++.+.+.. + .|.. ....++.|++-+..+..++++|.++.|+++|++.|+.
T Consensus 977 v~tw~~~m~vae~lsL~~Yivsl~~l~-------~-yfd~---~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpS 1045 (1051)
T KOG0210|consen 977 VRTWHWLMVVAELLSLALYIVSLAFLH-------E-YFDR---YFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPS 1045 (1051)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHH-------h-HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc
Confidence 999999988887888887776554322 1 1110 1234567777778888999999999999999999999
Q ss_pred HHHHH
Q 001888 955 HDLIQ 959 (1000)
Q Consensus 955 ~~~~~ 959 (1000)
+.+++
T Consensus 1046 YaKl~ 1050 (1051)
T KOG0210|consen 1046 YAKLQ 1050 (1051)
T ss_pred hhhcc
Confidence 98764
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-97 Score=914.17 Aligned_cols=694 Identities=28% Similarity=0.412 Sum_probs=549.9
Q ss_pred CCCCCccccccccccchhccCCChhhhccceeEEEecCCCCCcceEEEEEEECCccccCCCCCeEEeceeecCCCeEEEE
Q 001888 1 MNLDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYPLSPQQILLRDSKLKNTDYVYGV 80 (1000)
Q Consensus 1 ~~lDGet~lk~k~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~l~~F~G~~~~~~~~~~l~~~n~l~~Gs~l~~tg~~~g~ 80 (1000)
|+|+|||+++.|++..... .+.|.. ++..|++|+||.+++ |.+.|+
T Consensus 189 s~LTGES~pv~K~~~~~~~----------------~~~~~~-----------------~d~~n~l~sGt~V~~-G~~~gi 234 (917)
T COG0474 189 SALTGESLPVEKQALPLTK----------------SDAPLG-----------------LDRDNMLFSGTTVVS-GRAKGI 234 (917)
T ss_pred ccccCCCcchhcccccccc----------------cccccc-----------------CCccceEEeCCEEEc-ceEEEE
Confidence 6899999999999876554 111111 678999999999997 999999
Q ss_pred EEEecchhhHhhcCCC---CCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCcccc
Q 001888 81 VVFTGHDTKVMQNATD---PPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFY 157 (1000)
Q Consensus 81 Vv~tG~~Tki~~n~~~---~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (1000)
|++||.+|+++++... .+.+.+|+++.++++...++.+.++++++.+++..+ .+.. .|
T Consensus 235 VvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~-~~~~-------~~----------- 295 (917)
T COG0474 235 VVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLF-RGGN-------GL----------- 295 (917)
T ss_pred EEEEcCccHHHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCc-------cH-----------
Confidence 9999999988666543 335679999999999999999999998888776532 2111 13
Q ss_pred CCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccccccCCCcceeccccccccccceeEEEEcCC
Q 001888 158 DPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKT 237 (1000)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKT 237 (1000)
...+.+++++++.+||++||+++++++.+++. +| +++++++|+++++|+||++++||||||
T Consensus 296 ---------~~~~~~~v~l~va~IPegLp~~vti~la~g~~------~m----ak~~~ivr~l~avE~LG~v~vICsDKT 356 (917)
T COG0474 296 ---------LESFLTALALAVAAVPEGLPAVVTIALALGAQ------RM----AKDNAIVRSLNAIETLGSVDVICSDKT 356 (917)
T ss_pred ---------HHHHHHHHHHHHhccccchHHHHHHHHHHHHH------HH----HhccchhhccchhhhccCccEEEecCC
Confidence 34799999999999999999999999999999 56 888999999999999999999999999
Q ss_pred CccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCC
Q 001888 238 GTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVN 317 (1000)
Q Consensus 238 GTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 317 (1000)
||||+|+|+|++|++++. +.+.+ + ..
T Consensus 357 GTLTqN~M~v~~~~~~~~--~~~~~--------------------------------------------~--------~~ 382 (917)
T COG0474 357 GTLTQNKMTVKKIYINGG--GKDID--------------------------------------------D--------KD 382 (917)
T ss_pred CCCccCeEEEEEEEeCCC--ccccc--------------------------------------------c--------cc
Confidence 999999999999998851 00000 0 00
Q ss_pred CCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEE
Q 001888 318 EPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYE 397 (1000)
Q Consensus 318 ~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 397 (1000)
...+....+++.++++||++.+..+ + .+..+||+|.||++++.+.|+.+ .+ ......|+
T Consensus 383 ~~~~~~~~~~l~~~~lc~~~~~~~~-~----~~~~gdptE~Al~~~a~~~~~~~-~~---------------~~~~~~~~ 441 (917)
T COG0474 383 LKDSPALLRFLLAAALCNSVTPEKN-G----WYQAGDPTEGALVEFAEKLGFSL-DL---------------SGLEVEYP 441 (917)
T ss_pred cccchHHHHHHHHHHhcCccccccc-C----ceecCCccHHHHHHHHHhcCCcC-CH---------------HHHhhhcc
Confidence 0112344578999999999988754 2 56679999999999999998743 10 11256778
Q ss_pred EEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhc------cChhhHHHHHHHHHHHHHccceEEEEEEEccC
Q 001888 398 LLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSK------HGQQFEAETRRHINRYAEAGLRTLVIAYRELG 471 (1000)
Q Consensus 398 il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~ 471 (1000)
+++++||||+||||||+++..++++++++|||||+|+++|+. ..++.++.+.+..++|+++|||||++|||.++
T Consensus 442 ~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~ 521 (917)
T COG0474 442 ILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLD 521 (917)
T ss_pred eeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 999999999999999999977777999999999999999985 24567888999999999999999999999776
Q ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHH
Q 001888 472 EDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAIN 551 (1000)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ 551 (1000)
.++.. . .. +++|+||+|+|+++++||||++++++|+.|++|||++||+|||+.+||.+
T Consensus 522 ~~~~~----------------~-----~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~a 579 (917)
T COG0474 522 RAEKD----------------D-----EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIA 579 (917)
T ss_pred ccccc----------------c-----hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHH
Confidence 65311 0 11 67899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhH
Q 001888 552 IGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK 631 (1000)
Q Consensus 552 ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~ 631 (1000)
||++||+..+... .++++|.+++.+.++
T Consensus 580 Ia~~~Gi~~~~~~----------------------------------------------------~~vi~G~el~~l~~~ 607 (917)
T COG0474 580 IAKECGIEAEAES----------------------------------------------------ALVIDGAELDALSDE 607 (917)
T ss_pred HHHHcCCCCCCCc----------------------------------------------------eeEeehHHhhhcCHH
Confidence 9999997543210 468999999888776
Q ss_pred HHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 632 KLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 632 ~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
++.+.+ ..++ ||||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||+++....|+++||+++.+
T Consensus 608 el~~~~----~~~~--VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~d 681 (917)
T COG0474 608 ELAELV----EELS--VFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLD 681 (917)
T ss_pred HHHHHh----hhCc--EEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeec
Confidence 554444 4444 9999999999999999999999999999999999999999999999653333389999999998
Q ss_pred --hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHhcccC
Q 001888 712 --FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQD 789 (1000)
Q Consensus 712 --f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~fs~~~~~~~~~ll~~n~~~~~~p~~~~~~~~~~ 789 (1000)
|..+..+ ++|||++|.|+++++.|.+++|+..+++++++.+++.+ ..++.++|++|+|++++++|++++|+++
T Consensus 682 d~~~~i~~a-v~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~--~~p~~~~qll~inll~d~~pa~~L~~~~-- 756 (917)
T COG0474 682 DNFATIVLA-VVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLF--FLPLTPLQLLWINLLTDSLPALALGVED-- 756 (917)
T ss_pred CcHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cccHHHHHHHHHHHHHhhhhhheeecCC--
Confidence 4446666 99999999999999999999999999999999998766 5679999999999999999999999986
Q ss_pred CChhhhhcCccchhccccCCccchhhHHHhhHHHHHHHHHHHHHHHhhhccccc-cCCCcccchhhhhHHHHHHHHHHHH
Q 001888 790 VSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAF-RKDGHAVDYEVLGVAMYSSVVWAVN 868 (1000)
Q Consensus 790 ~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~v~~~~ 868 (1000)
++...+.+|+ .+++..+|+.+.++.|++...+++++++++.+..+..... ...+.........++.|+.+++++.
T Consensus 757 -~~~~~m~~~~---~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~ 832 (917)
T COG0474 757 -PESDVMKRPP---RGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQL 832 (917)
T ss_pred -CcccccccCC---CCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHH
Confidence 3344555552 3788899999999999999888888888877765543221 1112111244567788888887777
Q ss_pred HHHHHHhhc----ch--hHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHhccHHHHHHHHHHHHH
Q 001888 869 CQMALSINY----FT--WIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVS 935 (1000)
Q Consensus 869 ~~~~~~~~~----~~--~~~~~~~~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~~~~~ 935 (1000)
+..+..... ++ ++.+..+|+++++.+++.++..+.|.... ..|...+.+...|+.++.+...
T Consensus 833 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~-----~~f~~~~~~~~~~~~~~~~~~~ 900 (917)
T COG0474 833 LLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNL-----KIFQPTPLSLFEWLIAIAVALL 900 (917)
T ss_pred HHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHh-----hhccCCCCcHHHHHHHHHHHHH
Confidence 766533222 11 23566778887777777777666663211 1344555666777776655533
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-94 Score=810.62 Aligned_cols=731 Identities=22% Similarity=0.289 Sum_probs=560.2
Q ss_pred CCCCeEEeceeecCCCeEEEEEEEecchhhH---hhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 001888 60 SPQQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKR 136 (1000)
Q Consensus 60 ~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki---~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~~~ 136 (1000)
+++|++|.||.|+. |.+.|+|+.||.+|++ .......+..++|||+.++.+...+.-++.++|+..+++..-|...
T Consensus 190 dk~NiaFsGT~V~~-G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~ 268 (972)
T KOG0202|consen 190 DKKNIAFSGTLVVA-GRAKGIVIGTGLNTEIGKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLD 268 (972)
T ss_pred cceeeEeecceeec-CceeEEEEeccccchHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhcc
Confidence 45699999999996 9999999999999965 3333344566899999999999999977777777776652222111
Q ss_pred ccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccccccCCCcce
Q 001888 137 DIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPAR 216 (1000)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~ 216 (1000)
.... -.|+ ......|.-++.|.+++||+|||+.+++..+++.. || ++++++
T Consensus 269 p~~~---g~~f----------------k~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~------rM----akknaI 319 (972)
T KOG0202|consen 269 PVHG---GSWF----------------KGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTR------RM----AKKNAI 319 (972)
T ss_pred cccc---ccch----------------hchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHH------HH----Hhhhhh
Confidence 1000 1232 33456788899999999999999999999999998 78 999999
Q ss_pred eccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCCCCccccC
Q 001888 217 ARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVES 296 (1000)
Q Consensus 217 v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1000)
||++.++|+||.+++||||||||||+|+|.++++++.+..+... ++-. . .+... +
T Consensus 320 VRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~-~~f~--~---tg~ty-----------------~-- 374 (972)
T KOG0202|consen 320 VRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATV-DEFN--P---TGTTY-----------------S-- 374 (972)
T ss_pred hhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccc-cccc--c---CCcee-----------------C--
Confidence 99999999999999999999999999999999999977654321 0000 0 00000 0
Q ss_pred CCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHcCcEEEeecC
Q 001888 297 GKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQ 376 (1000)
Q Consensus 297 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~ 376 (1000)
..+-.+.+.. .......+.+.+++++.+.++||.+..++++. +.++- -|.|+|.||..+|++.|+.-.....
T Consensus 375 ---~~g~v~~~~~---~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~~-~G~pTE~AL~vlaeKm~l~~~~~~~ 446 (972)
T KOG0202|consen 375 ---PEGEVFKDGL---YEKDKAGDNDLLQELAEICALCNDATVEYNDA-DCYEK-VGEPTEGALIVLAEKMGLPGTRSTN 446 (972)
T ss_pred ---CCCceEecCc---cccccccccHHHHHHHHHHHhhhhhhhhcCch-hhHHh-cCCchHHHHHHHHHHcCCCcchhhc
Confidence 0000010000 00011234567889999999999998887664 33332 3799999999999999986433110
Q ss_pred CeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCc--EEEEEccchhHhHHHHhcc-----------Chh
Q 001888 377 TSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQ--LLLLCKGADSVMFERLSKH-----------GQQ 443 (1000)
Q Consensus 377 ~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~--~~l~~KGa~~~i~~~~~~~-----------~~~ 443 (1000)
.+ .. + +..........++...++||+|+||+|||.+.++.+. +.+|+|||+|.++++|+.. .+.
T Consensus 447 ~s-~~-~-~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~ 523 (972)
T KOG0202|consen 447 LS-NE-E-ASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQA 523 (972)
T ss_pred cc-cc-c-cccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHH
Confidence 00 00 0 1112222356677789999999999999999976554 8999999999999999542 345
Q ss_pred hHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHH-HHHHHhhhccceeeEEeeecccccC
Q 001888 444 FEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALV-ASAAEKIERDLILLGATAVEDKLQK 522 (1000)
Q Consensus 444 ~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~iE~~l~~lG~i~i~D~lr~ 522 (1000)
.++.+.+...+|+++|+|+|++|++..+..- .+..... -.-+...|+||+|+|++|+.||||+
T Consensus 524 ~re~il~~~~~~g~~gLRvLalA~~~~~~~~----------------~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ 587 (972)
T KOG0202|consen 524 SRETILANVYEMGSEGLRVLALASKDSPGQV----------------PDDQDLNDTSNRATAESDLTFVGLVGILDPPRP 587 (972)
T ss_pred HHHHHHHHHHHHhhccceEEEEEccCCcccC----------------hhhhhhcccccccccccceEEEEEeeccCCCch
Confidence 6888999999999999999999999876410 0000000 0124678999999999999999999
Q ss_pred CcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhh
Q 001888 523 GVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREG 602 (1000)
Q Consensus 523 ~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (1000)
+|+++|+.|++|||+|.|+|||+.+||.+||+++|+...+..
T Consensus 588 ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed-------------------------------------- 629 (972)
T KOG0202|consen 588 EVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED-------------------------------------- 629 (972)
T ss_pred hHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc--------------------------------------
Confidence 999999999999999999999999999999999998764321
Q ss_pred hhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChH
Q 001888 603 ISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVG 682 (1000)
Q Consensus 603 ~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~ 682 (1000)
-....++|.+++.+.++++..... +..+|+|++|++|.+||+.||+.|++|+|+|||+||+|
T Consensus 630 ------------~~~~~~TG~efD~ls~~~~~~~~~------~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDAp 691 (972)
T KOG0202|consen 630 ------------VSSMALTGSEFDDLSDEELDDAVR------RVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAP 691 (972)
T ss_pred ------------ccccccchhhhhcCCHHHHHHHhh------cceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchh
Confidence 011266777777666555543333 45699999999999999999999999999999999999
Q ss_pred HhhhcCcccccc--CccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 001888 683 MLQEADIGVGIS--GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFS 758 (1000)
Q Consensus 683 mlk~AdvGIa~~--g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~fs 758 (1000)
+||.|||||||+ |+++ ||++||+|+.| |+.+..+ +.+||.+|.|+++++.|.+..|+....+.++...+.
T Consensus 692 ALK~AdIGIAMG~~GTdV--aKeAsDMVL~DDnFstIvaA-VEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~--- 765 (972)
T KOG0202|consen 692 ALKKADIGIAMGISGTDV--AKEASDMVLADDNFSTIVAA-VEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFG--- 765 (972)
T ss_pred hhhhcccceeecCCccHh--hHhhhhcEEecCcHHHHHHH-HHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhC---
Confidence 999999999885 6676 99999999998 6668888 999999999999999999999999999999988774
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccccCCccchhhHHHhhHHHHHHHHHHHHHHHhhh
Q 001888 759 GRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSI 838 (1000)
Q Consensus 759 ~~~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (1000)
-..+++++|++|+|++++.+|+.++|+++ ++.+.+.++|+ .++..+++++.|++++..|+|.++++.+.+.+.+
T Consensus 766 ~p~pL~pvQiLWiNlvtDG~PA~aLG~ep--~D~DiM~kpPR----~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~ 839 (972)
T KOG0202|consen 766 IPEPLIPVQILWINLVTDGPPATALGFEP--VDPDIMKKPPR----DSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWM 839 (972)
T ss_pred CCCcccchhhheeeeeccCCchhhcCCCC--CChhHHhCCCC----CCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHH
Confidence 23469999999999999999999999975 45566666665 7788999999999999999999998887776665
Q ss_pred ccccccCCCcccc----------------------hhhhhHHHHHHHHHHHHHHHHHHhhcch-------hHHHHHHHHH
Q 001888 839 FNQAFRKDGHAVD----------------------YEVLGVAMYSSVVWAVNCQMALSINYFT-------WIQHFFIWGS 889 (1000)
Q Consensus 839 ~~~~~~~~g~~~~----------------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~-------~~~~~~~~~s 889 (1000)
... +|.... .....++.|+++++.-.+.. +..++++ +|.|.++.++
T Consensus 840 ~~~----~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNa-L~~~se~~slf~~~~~~N~~l~~a 914 (972)
T KOG0202|consen 840 YGA----DGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNA-LNCLSENKSLFTMPPWSNRWLLWA 914 (972)
T ss_pred hcC----CCCcChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHHH-hhcccCCcceEEecccccHHHHHH
Confidence 531 111110 00122667777766554443 3444433 6788899999
Q ss_pred HHHHHHHHHHHhcCCCCCchhhHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 001888 890 IALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFR 951 (1000)
Q Consensus 890 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~~~~~~ll~~~i~k~~~~~~~ 951 (1000)
+++.++..+...|+|+ ++. .|...++++..|++++.+....++.++++|++.|.+.
T Consensus 915 i~~S~~~~f~ilYvp~-l~~-----iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 915 IALSFVLHFLVLYVPP-LQR-----IFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred HHHHHHhhheEEEech-hhh-----hheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 9999999999999984 344 5668899999999999999999999999999999764
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-90 Score=854.99 Aligned_cols=734 Identities=22% Similarity=0.244 Sum_probs=543.6
Q ss_pred cCCCCCeEEeceeecCCCeEEEEEEEecchhhHh---hcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 001888 58 PLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVM---QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIET 134 (1000)
Q Consensus 58 ~l~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki~---~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~ 134 (1000)
+.+.+|++|+||.+.+ |++.|+|++||.+|++. ++...++.++||+|+++++++..++.+.++++++.++++..+.
T Consensus 145 ~~~~~n~l~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~ 223 (917)
T TIGR01116 145 NQDKKNMLFSGTLVVA-GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHF 223 (917)
T ss_pred cccccceeeeCCEEec-ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567899999999996 99999999999999764 4666777889999999999999998887777776655432211
Q ss_pred ccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccccccCCCc
Q 001888 135 KRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKP 214 (1000)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~ 214 (1000)
...... ..|+ ..+...+..++++++.+||++||++++++.+.++. +| ++++
T Consensus 224 ~~~~~~---~~~~----------------~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~------~m----~~~~ 274 (917)
T TIGR01116 224 NDPALG---GGWI----------------QGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTR------KM----AKKN 274 (917)
T ss_pred cccccc---chhH----------------HHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHH------HH----HHCC
Confidence 000000 0121 12233556778899999999999999999999998 66 7789
Q ss_pred ceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCCCCccc
Q 001888 215 ARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIV 294 (1000)
Q Consensus 215 ~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1000)
+++|+++++|+||++++||||||||||+|+|+|++++..+..+.... . ....+.... |.
T Consensus 275 ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~-~-----~~~~~~~~~---------~~------ 333 (917)
T TIGR01116 275 AIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLN-E-----FCVTGTTYA---------PE------ 333 (917)
T ss_pred cEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccc-e-----EEecCCccC---------CC------
Confidence 99999999999999999999999999999999999987654321000 0 000000000 00
Q ss_pred cCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHcCcEEEee
Q 001888 295 ESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGS 374 (1000)
Q Consensus 295 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~ 374 (1000)
+..+.+.........+..+.++.++++||++....++..+..+. .+||+|.||++++++.|+....+
T Consensus 334 ------------~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~-~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 334 ------------GGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEK-VGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ------------ccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceee-ccChhHHHHHHHHHHcCCCchhc
Confidence 00000000000112344677899999999988754332222222 47999999999999999876654
Q ss_pred cCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhcc----------Chhh
Q 001888 375 SQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH----------GQQF 444 (1000)
Q Consensus 375 ~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----------~~~~ 444 (1000)
..+.+.....+. .+.....|++++++||||+||||||++++ ++++++|+|||||.|+++|+.. +++.
T Consensus 401 ~~~~~~~~~~~~--~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~ 477 (917)
T TIGR01116 401 GVSSKRRPALGC--NSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKM 477 (917)
T ss_pred ccccccccccch--hHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHH
Confidence 443333322211 00114578899999999999999999996 4678999999999999999742 2345
Q ss_pred HHHHHHHHHHHHH-ccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCC
Q 001888 445 EAETRRHINRYAE-AGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKG 523 (1000)
Q Consensus 445 ~~~~~~~~~~~~~-~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~ 523 (1000)
++++.+++++|++ +|+|||++|||.+++++.. +. . .+ ....+.+|+||+|+|+++++||+|++
T Consensus 478 ~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~-~~---------~-~~-----~~~~~~~e~~l~~lGl~~~~Dplr~~ 541 (917)
T TIGR01116 478 KNTILSVIKEMGTTKALRCLALAFKDIPDPREE-DL---------L-SD-----PANFEAIESDLTFIGVVGMLDPPRPE 541 (917)
T ss_pred HHHHHHHHHHHHhhcCCeEEEEEEEECCccccc-cc---------c-cc-----chhhhhhcCCcEEEEEeeeeCCCchh
Confidence 6778899999999 9999999999999764311 00 0 01 01235689999999999999999999
Q ss_pred cHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhh
Q 001888 524 VPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGI 603 (1000)
Q Consensus 524 v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (1000)
++++|+.|+++||++||+|||+.+||.++|+++|+..++..+.
T Consensus 542 v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~------------------------------------- 584 (917)
T TIGR01116 542 VADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVT------------------------------------- 584 (917)
T ss_pred HHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcccc-------------------------------------
Confidence 9999999999999999999999999999999999976542211
Q ss_pred hhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChHH
Q 001888 604 SQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGM 683 (1000)
Q Consensus 604 ~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~m 683 (1000)
...++|.+++.+.+++... ..++.+||||++|+||.++|+.+|..|++|+|+|||.||++|
T Consensus 585 -------------~~~~~g~~l~~~~~~~~~~------~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~a 645 (917)
T TIGR01116 585 -------------FKSFTGREFDEMGPAKQRA------ACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPA 645 (917)
T ss_pred -------------ceeeeHHHHhhCCHHHHHH------hhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHH
Confidence 1134555544333322221 123567999999999999999999899999999999999999
Q ss_pred hhhcCcccccc-CccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 001888 684 LQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGR 760 (1000)
Q Consensus 684 lk~AdvGIa~~-g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~fs~~ 760 (1000)
|++|||||+|+ |++. ++++||+++.+ |+.+.++ +.|||++|.|+++++.|.+++|+..+++.+++.++. ..
T Consensus 646 lk~AdVGia~g~g~~~--ak~aAD~vl~dd~f~~i~~~-i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~ 719 (917)
T TIGR01116 646 LKKADIGIAMGSGTEV--AKEASDMVLADDNFATIVAA-VEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALG---IP 719 (917)
T ss_pred HHhCCeeEECCCCcHH--HHHhcCeEEccCCHHHHHHH-HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHc---CC
Confidence 99999999994 4444 88999999998 8899999 799999999999999999999999999999988763 22
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccccCCccchhhHHHhhHHHHHHHHHHHHHHHhhhcc
Q 001888 761 PAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFN 840 (1000)
Q Consensus 761 ~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (1000)
.+++++|++|+|++++.+|+++++.++ ++++.+.++|+ .++++++++++++.|++.|++++++.++.+++.+..
T Consensus 720 ~pl~~~qll~inli~d~lp~~~l~~~~--~~~~~m~~pP~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 793 (917)
T TIGR01116 720 EGLIPVQLLWVNLVTDGLPATALGFNP--PDKDIMWKPPR----RPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLL 793 (917)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCC--cchhHhcCCCC----CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 579999999999999999999999865 34555556665 567889999999999999999998866655443321
Q ss_pred ccc-cC-----------CCcc----cchhhhhHHHHHHHHHHHHHHHHHHhh-c---c--hhHHHHHHHHHHHHHHHHHH
Q 001888 841 QAF-RK-----------DGHA----VDYEVLGVAMYSSVVWAVNCQMALSIN-Y---F--TWIQHFFIWGSIALWYIFLV 898 (1000)
Q Consensus 841 ~~~-~~-----------~g~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~-~---~--~~~~~~~~~~si~~~~~~~~ 898 (1000)
..+ .. ++.. .......|++|+++++.+.++.+...+ . | ..+.|.+++.++++.+++++
T Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~ 873 (917)
T TIGR01116 794 THFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHF 873 (917)
T ss_pred cCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHH
Confidence 011 00 1100 012234678888888777666542211 1 2 12456778888888888888
Q ss_pred HHhcCCCCCchhhHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001888 899 VYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQT 948 (1000)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~~~~~~ll~~~i~k~~~~ 948 (1000)
+..++|. ++. +|++.++++..|+.++.++++.++.+++.|+++|
T Consensus 874 ~~~~v~~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 874 LILYVPF-LSR-----IFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HHHHhHH-HHH-----HhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 8878873 233 6668899999999999999999999999998763
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-88 Score=846.86 Aligned_cols=748 Identities=17% Similarity=0.218 Sum_probs=536.9
Q ss_pred CCeEEeceeecCCCeEEEEEEEecchhhHh---hcCCCCC-----------------------------------CCccH
Q 001888 62 QQILLRDSKLKNTDYVYGVVVFTGHDTKVM---QNATDPP-----------------------------------SKRSK 103 (1000)
Q Consensus 62 ~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki~---~n~~~~~-----------------------------------~k~s~ 103 (1000)
.|++|+||.|.+ |.+.|+|++||.+|.+. ....... ..+||
T Consensus 196 ~n~lf~GT~V~~-G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tp 274 (1053)
T TIGR01523 196 INLAFSSSAVTK-GRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTP 274 (1053)
T ss_pred CCccccCceEEe-eeEEEEEEEecCccHHHHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCc
Confidence 389999999996 99999999999999652 2221110 01499
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccc
Q 001888 104 IERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPI 183 (1000)
Q Consensus 104 l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~ 183 (1000)
+|+++++++..++.+.++++++.+++..+ . .| ...+..++.+++.+||+
T Consensus 275 Lq~~l~~l~~~l~~i~~~~~~~~~~~~~~----~-------~~--------------------~~~~~~av~l~Va~VPe 323 (1053)
T TIGR01523 275 LHRKLSKLAVILFCIAIIFAIIVMAAHKF----D-------VD--------------------KEVAIYAICLAISIIPE 323 (1053)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhh----h-------hh--------------------HHHHHHHHHHHHHHccc
Confidence 99999999999888887777766543211 0 00 12456788999999999
Q ss_pred eehhhHHHHHHHhHHHhhcccccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCe-eeccchh
Q 001888 184 SLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGV-AYGRVMT 262 (1000)
Q Consensus 184 sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~-~y~~~~~ 262 (1000)
+||++++++.++++. +| ++++++||+++++|+||++++||+|||||||+|+|+|+++++++. .|.....
T Consensus 324 gLp~~vti~La~g~~------rM----ak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~ 393 (1053)
T TIGR01523 324 SLIAVLSITMAMGAA------NM----SKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNS 393 (1053)
T ss_pred chHHHHHHHHHHHHH------HH----HhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCC
Confidence 999999999999998 77 889999999999999999999999999999999999999998752 2211100
Q ss_pred HHHHHHHhhcCCcccccCCCCCCCCCCCCccccCCCccCCcccCchhhhcc-----cCCC---CCChHHHHHHHHHHhhh
Q 001888 263 EVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNG-----QWVN---EPHSDVIQKFFRVLAIC 334 (1000)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~---~~~~~~~~~~~~~l~lC 334 (1000)
. .............+..... .. ......++++... .... +..++..++++.++++|
T Consensus 394 ~----------~~~~~~~g~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lc 457 (1053)
T TIGR01523 394 D----------DAFNPNEGNVSGIPRFSPY-----EY-SHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALA 457 (1053)
T ss_pred C----------CCCCCcccccccccccccc-----cc-cccccccccccccccccccccccccccccHHHHHHHHHHHhc
Confidence 0 0000000000000000000 00 0000000000000 0000 00123467799999999
Q ss_pred cceeeccCCCCCceEEeeCChhHHHHHHHHHHcCcEEEe---------ecC-CeeEEEecCCCCCccccEEEEEEEeeCC
Q 001888 335 HTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFG---------SSQ-TSISLHELDPVSGQKVNRVYELLHVLEF 404 (1000)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~---------~~~-~~~~i~~~~~~~~~~~~~~~~il~~~~F 404 (1000)
|++....++..+... ..+||+|.||+++|.+.|+.... ..+ +...+..... ++....|++++++||
T Consensus 458 n~a~~~~~~~~~~~~-~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~pF 533 (1053)
T TIGR01523 458 NIATVFKDDATDCWK-AHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNE---KPGSAQFEFIAEFPF 533 (1053)
T ss_pred cCCeeeccCCCCcee-eCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccc---cccccccceEEEecc
Confidence 998875432222222 24799999999999999874210 000 0001111110 011456899999999
Q ss_pred CCCCceEEEEEEcCCC-cEEEEEccchhHhHHHHhcc-----------ChhhHHHHHHHHHHHHHccceEEEEEEEccCH
Q 001888 405 TSSRKRMSVMVRNPEN-QLLLLCKGADSVMFERLSKH-----------GQQFEAETRRHINRYAEAGLRTLVIAYRELGE 472 (1000)
Q Consensus 405 ~s~rkrmsviv~~~~~-~~~l~~KGa~~~i~~~~~~~-----------~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~ 472 (1000)
||+|||||++++++++ ++++|+|||||.|+++|+.. +++.++++.+.+++|+++|+|||++|||.+++
T Consensus 534 ds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~ 613 (1053)
T TIGR01523 534 DSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDK 613 (1053)
T ss_pred CCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCc
Confidence 9999999999997644 58899999999999999742 23456778889999999999999999999987
Q ss_pred HHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHH
Q 001888 473 DEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINI 552 (1000)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~i 552 (1000)
+++..+ .+.. .. .+ .+.+|+||+|+|+++++||+|++++++|+.|+++||++||+|||+..||.++
T Consensus 614 ~~~~~~--~~~~---~~-~~--------~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~i 679 (1053)
T TIGR01523 614 ADNNDD--QLKN---ET-LN--------RATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAI 679 (1053)
T ss_pred hhccch--hhhc---cc-cc--------hhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHH
Confidence 543211 0100 00 01 2457899999999999999999999999999999999999999999999999
Q ss_pred HHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHH
Q 001888 553 GYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKK 632 (1000)
Q Consensus 553 a~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~ 632 (1000)
|+++|+..++... ..+ ......+++|.+++.+.+++
T Consensus 680 A~~~Gi~~~~~~~---~~~-----------------------------------------~~~~~~vitG~~l~~l~~~~ 715 (1053)
T TIGR01523 680 AQEVGIIPPNFIH---DRD-----------------------------------------EIMDSMVMTGSQFDALSDEE 715 (1053)
T ss_pred HHHcCCCCccccc---ccc-----------------------------------------ccccceeeehHHhhhcCHHH
Confidence 9999998643110 000 00113589999998776655
Q ss_pred HHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChHHhhhcCcccccc--CccccchhccCcEEec
Q 001888 633 LEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDYAIA 710 (1000)
Q Consensus 633 ~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~mlk~AdvGIa~~--g~e~~~ak~~aD~vl~ 710 (1000)
+.+... ...||||++|+||.++|+.+|+.|++|+|+|||+||+|||++|||||||+ |++. |+++||+++.
T Consensus 716 l~~~~~------~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v--ak~aADivl~ 787 (1053)
T TIGR01523 716 VDDLKA------LCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV--AKDASDIVLS 787 (1053)
T ss_pred HHHHhh------cCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHH--HHHhcCEEEe
Confidence 544322 34699999999999999999999999999999999999999999999984 5555 8999999998
Q ss_pred c--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCcc--chhhHHHHHHHHHHHHHHHHHHHhc
Q 001888 711 Q--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRP--AYNDWYMSCYNVFFTSLPVIALGVF 786 (1000)
Q Consensus 711 ~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~fs~~~--~~~~~~ll~~n~~~~~~p~~~~~~~ 786 (1000)
+ |+.+.++ +.|||++|+|+++++.|.+++|+..+++.+++.++..++|.+ +++++|++|+|++++.+|+++++++
T Consensus 788 dd~f~~I~~~-i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e 866 (1053)
T TIGR01523 788 DDNFASILNA-IEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLE 866 (1053)
T ss_pred cCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccC
Confidence 7 8889999 899999999999999999999999999999999988777764 5889999999999999999999985
Q ss_pred ccCCChhhhhcCccchhccccCCccchhhHHHhhHHHHHHHHHHHHHHHhhhcc---ccccC-----CCcc-cchhhhhH
Q 001888 787 DQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFN---QAFRK-----DGHA-VDYEVLGV 857 (1000)
Q Consensus 787 ~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~g~~-~~~~~~~~ 857 (1000)
+ ++++.|.++|+ .++..+++++++..+++.|++.+++.+..+++.++. ..... .+.. .+.....+
T Consensus 867 ~--~~~~~m~~~Pr----~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t 940 (1053)
T TIGR01523 867 K--AAPDLMDRLPH----DNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARS 940 (1053)
T ss_pred C--CChhHHhcCCC----CCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHH
Confidence 3 45555555665 466789999988889999999988777665533211 00000 0000 12334567
Q ss_pred HHHHHHHHHHHHHHHHHhhc-----c-----------------hhHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHH
Q 001888 858 AMYSSVVWAVNCQMALSINY-----F-----------------TWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVL 915 (1000)
Q Consensus 858 ~~~~~~v~~~~~~~~~~~~~-----~-----------------~~~~~~~~~~si~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (1000)
+.|+++++.+.+..+. .++ | ..+.|.++++++++.++++++..++|+ ++.. +
T Consensus 941 ~~f~~l~~~~~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~-~~~~----~ 1014 (1053)
T TIGR01523 941 AAFATMTFCALILAVE-VKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPV-INDD----V 1014 (1053)
T ss_pred HHHHHHHHHHHHHHHH-HhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhh-hhhh----h
Confidence 7777777766555432 111 1 124677888888888888888888883 2321 4
Q ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 001888 916 VEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFR 951 (1000)
Q Consensus 916 ~~~~~~~~~~w~~~i~~~~~~ll~~~i~k~~~~~~~ 951 (1000)
|++.++++ .|++++.++++.++.++++|+++|++.
T Consensus 1015 f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~r~~~ 1049 (1053)
T TIGR01523 1015 FKHKPIGA-EWGLAAAATIAFFFGAEIWKCGKRRLF 1049 (1053)
T ss_pred hccCCcch-HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 55777775 899999999999999999999887663
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-90 Score=774.30 Aligned_cols=722 Identities=21% Similarity=0.287 Sum_probs=551.5
Q ss_pred ecCCCCCcceEEE-EEEEC-----CccccC----CCCCeEEeceeecCCCeEEEEEEEecchhhH---hhcCCCCCCCcc
Q 001888 36 CEDPNERLYSFVG-TLQYE-----GKQYPL----SPQQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRS 102 (1000)
Q Consensus 36 ~e~p~~~l~~F~G-~~~~~-----~~~~~l----~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki---~~n~~~~~~k~s 102 (1000)
+..|.+-+. ++| .+++| ||+.++ +.+.+|++||++.+ |.+.++|+.+|.+|+. |..........|
T Consensus 250 DqvPADGvl-i~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~e-GsgkMlVTaVGmnt~wG~~m~~l~~~~~e~t 327 (1034)
T KOG0204|consen 250 DQVPADGVL-IQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVME-GSGKMLVTAVGMNTQWGIIMTLLGAGGEEET 327 (1034)
T ss_pred CccccceEE-EeccceeEecccccCCCcceeccCCCCCeEeecceeec-CcceEEEEEeeecchHhhHHHhhhcCCCcCC
Confidence 445655442 455 55664 666655 56789999999997 9999999999999954 555556666889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh--cccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhcc
Q 001888 103 KIERKMDKIVYLLFSTLILISSTGSVFFGIE--TKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYL 180 (1000)
Q Consensus 103 ~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 180 (1000)
|+|-++++++..+..+.++++++..++.... .+....+++. .|- .+......++..|..++.+++.+
T Consensus 328 pLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~-~~~----------~~~~~~~~~v~~f~i~VTilVVA 396 (1034)
T KOG0204|consen 328 PLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGT-GTT----------WSDEYIQEFVKFFIIAVTILVVA 396 (1034)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCC-Ccc----------ccHHHHHHHHHHhhheeEEEEEE
Confidence 9999999999999888887777766554432 1211111110 010 01112344566777888899999
Q ss_pred ccceehhhHHHHHHHhHHHhhcccccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccc
Q 001888 181 IPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRV 260 (1000)
Q Consensus 181 iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~ 260 (1000)
+|++||+++++..+.... +| .+.+.+||.++++|+||..+.||+|||||||.|+|++.+.++++..|..+
T Consensus 397 VPEGLPLAVTLsLAys~k------kM----mkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~ 466 (1034)
T KOG0204|consen 397 VPEGLPLAVTLSLAYSMK------KM----MKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVN 466 (1034)
T ss_pred CCCCccHHHHHHHHHHHH------HH----hcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeecccccccc
Confidence 999999999998887777 66 66678999999999999999999999999999999999999998876532
Q ss_pred hhHHHHHHHhhcCCcccccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeec
Q 001888 261 MTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPD 340 (1000)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~ 340 (1000)
... . ..-.......++.+++...+-...
T Consensus 467 ~~~-~---------------------------------------------------~~l~~~~~~ll~~gI~~Nt~g~v~ 494 (1034)
T KOG0204|consen 467 SPK-S---------------------------------------------------SNLPPSLLDLLLQGIAQNTTGSVV 494 (1034)
T ss_pred Ccc-c---------------------------------------------------ccCCHHHHHHHHHHHhhcCCCeEE
Confidence 110 0 000112233455555555544444
Q ss_pred cCCCCCceEEeeCChhHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCC
Q 001888 341 VNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPEN 420 (1000)
Q Consensus 341 ~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~ 420 (1000)
.++..+....+.+||+|.||+.++.++|.++.. .+...++.+++||+|.||||+++++.+++
T Consensus 495 ~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~------------------~R~e~~v~kv~~FNS~kK~~gvvi~~~~~ 556 (1034)
T KOG0204|consen 495 KPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD------------------VRPEEKVVKVYPFNSVKKRMGVVIKLPDG 556 (1034)
T ss_pred ecCCCCcCccccCCHHHHHHHHHHHHhCcchHh------------------hcchhheeEEeccCcccceeeEEEEcCCC
Confidence 444344333456899999999999999987754 26677889999999999999999998877
Q ss_pred cEEEEEccchhHhHHHHhcc----------ChhhHHHHHHHHHHHHHccceEEEEEEEccCHH--HHHHHHHHHHHHhhc
Q 001888 421 QLLLLCKGADSVMFERLSKH----------GQQFEAETRRHINRYAEAGLRTLVIAYRELGED--EYRIWEKEFLKAKTS 488 (1000)
Q Consensus 421 ~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~--~~~~~~~~~~~~~~~ 488 (1000)
..++|+|||.|.++..|+.. +++.+..++..++.||++|+||+|+|||++... +..+|..
T Consensus 557 ~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~-------- 628 (1034)
T KOG0204|consen 557 GHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN-------- 628 (1034)
T ss_pred CeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccc--------
Confidence 63499999999999999863 345566889999999999999999999996543 1111210
Q ss_pred chhhHHHHHHHHHHhhhccceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEE
Q 001888 489 VTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVI 568 (1000)
Q Consensus 489 ~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i 568 (1000)
.+..+.+++++|++|++||.||||+++|+.|+.|||.|.|+|||+..||++||.+|||+.++...
T Consensus 629 ------------~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~--- 693 (1034)
T KOG0204|consen 629 ------------EELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDF--- 693 (1034)
T ss_pred ------------cccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCcc---
Confidence 13456899999999999999999999999999999999999999999999999999999876432
Q ss_pred ecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceE
Q 001888 569 TLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI 648 (1000)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi 648 (1000)
+++.|+++..+.+++..+...++ .|
T Consensus 694 -------------------------------------------------~~lEG~eFr~~s~ee~~~i~pkl------~V 718 (1034)
T KOG0204|consen 694 -------------------------------------------------LALEGKEFRELSQEERDKIWPKL------RV 718 (1034)
T ss_pred -------------------------------------------------ceecchhhhhcCHHHHHhhhhhh------ee
Confidence 36677777766666666655544 49
Q ss_pred EEcCChhhHHHHHHHHhcCCCEEEEEcCCccChHHhhhcCccccc--cCccccchhccCcEEecc--hhhhHHHHHHhhh
Q 001888 649 CCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGH 724 (1000)
Q Consensus 649 ~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~mlk~AdvGIa~--~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR 724 (1000)
.+|.+|.+|..+|+.+++.|++|+++|||.||.|+|++||||.|| +|+|. ||++||++|+| |..+++. +.+||
T Consensus 719 lARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeV--AKEaSDIIi~DDNFssIVk~-v~WGR 795 (1034)
T KOG0204|consen 719 LARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEV--AKEASDIIILDDNFSSIVKA-VKWGR 795 (1034)
T ss_pred eecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhh--hhhhCCeEEEcCchHHHHHH-HHhhh
Confidence 999999999999999999999999999999999999999999976 68888 99999999998 6679999 89999
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhc
Q 001888 725 WCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQE 804 (1000)
Q Consensus 725 ~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~fs~~~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~ 804 (1000)
+.|.+++|+++|.+.-|++..++.|..+... +.+++.+.|++|.|++++.+.+++++.++ |.++.+.|.|.
T Consensus 796 ~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~---~dsPLtAVQlLWVNLIMDTLgALALATep--Pt~~Lm~RkP~---- 866 (1034)
T KOG0204|consen 796 NVYDNIQKFLQFQLTVNVVALIVNFVSACAT---GDSPLTAVQLLWVNLIMDTLGALALATEP--PTDELMKRKPV---- 866 (1034)
T ss_pred HHHHHHHHhheeEEEEEEEeehhhhhhhhhc---CCccHHHHHHHHHHHHHHHHHHHHhccCC--CChHHhcCCCC----
Confidence 9999999999999999999999999988775 66789999999999999999999998864 66677777776
Q ss_pred cccCCccchhhHHHhhHHHHHHHHHHHHHHHhhhccccccCCCccc-chhhhhHHHHHHHHHHHHHHHHH-----Hhhcc
Q 001888 805 GVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAV-DYEVLGVAMYSSVVWAVNCQMAL-----SINYF 878 (1000)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~v~~~~~~~~~-----~~~~~ 878 (1000)
+++.++++..+|..++.+++||-+++|.+.+.... .+..+++.. ......|++|.++++++-|.-+. ..+.+
T Consensus 867 GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~--if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvF 944 (1034)
T KOG0204|consen 867 GRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKS--IFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVF 944 (1034)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchh--hhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHH
Confidence 89999999999999999999999999999876543 233333321 12234466666666655443321 11112
Q ss_pred h-hHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 001888 879 T-WIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRF 950 (1000)
Q Consensus 879 ~-~~~~~~~~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~~~~~~ll~~~i~k~~~~~~ 950 (1000)
. .+.+..+...+.+.++++.++..+. +. ++.+.++++..|+.++++.+..++.-.+.|.+-..+
T Consensus 945 kgi~~N~~F~~ii~~T~v~QviIveF~---g~-----~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~~ 1009 (1034)
T KOG0204|consen 945 KGIFRNRLFCVIITITVVSQVIIVEFG---GA-----FFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCIPVSS 1009 (1034)
T ss_pred HHHhcCceEEEEeeeeeehhhhhhhhc---Cc-----ceeeecccHHHHHHHHHHHHHHHHHHHHheeccccc
Confidence 1 2233333333444455555443332 22 345788999999999999999999888887665433
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-88 Score=842.86 Aligned_cols=721 Identities=18% Similarity=0.221 Sum_probs=541.0
Q ss_pred cCCCCCeEEeceeecCCCeEEEEEEEecchhhHhhcCC---CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 001888 58 PLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNAT---DPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIET 134 (1000)
Q Consensus 58 ~l~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki~~n~~---~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~ 134 (1000)
|++.+|++|+||.+.+ |++.|+|++||.+|++.+... +.+.+++|+++.+++++..+..+.++++++.++++.+.
T Consensus 210 ~~~~~n~l~~Gt~v~~-G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 287 (997)
T TIGR01106 210 PLETRNIAFFSTNCVE-GTARGIVVNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL- 287 (997)
T ss_pred ccccCCeEEeccEeee-eeEEEEEEEccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 4567899999999996 999999999999997755443 55667899999999999998888777777665543221
Q ss_pred ccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccccccCCCc
Q 001888 135 KRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKP 214 (1000)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~ 214 (1000)
+. .| ...+..++.+++.+||++|+++++++...++. +| ++++
T Consensus 288 ~~--------~~--------------------~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~------~m----~~~~ 329 (997)
T TIGR01106 288 GY--------TW--------------------LEAVIFLIGIIVANVPEGLLATVTVCLTLTAK------RM----ARKN 329 (997)
T ss_pred cC--------CH--------------------HHHHHHHHHHHhhcCCccchHHHHHHHHHHHH------HH----HHCC
Confidence 10 12 22556678888889999999999999999888 56 7889
Q ss_pred ceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCCCCccc
Q 001888 215 ARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIV 294 (1000)
Q Consensus 215 ~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1000)
+++|+++++|+||++++||||||||||+|+|+|+++++++..|..+... .
T Consensus 330 ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~------------~------------------ 379 (997)
T TIGR01106 330 CLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE------------D------------------ 379 (997)
T ss_pred cEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCcc------------C------------------
Confidence 9999999999999999999999999999999999999988766432100 0
Q ss_pred cCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCC--CceEEeeCChhHHHHHHHHHHcCcEEE
Q 001888 295 ESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEET--GEISYEAESPDEAAFVIAAREVGFQFF 372 (1000)
Q Consensus 295 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~--~~~~~~~~sp~e~al~~~a~~~g~~~~ 372 (1000)
..+..+ +......+.++.++++||++....+... ....+..+||+|.||++++...+....
T Consensus 380 -----~~~~~~------------~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~ 442 (997)
T TIGR01106 380 -----QSGVSF------------DKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVM 442 (997)
T ss_pred -----CCCccC------------CcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHH
Confidence 000000 0112345578899999999876533211 001234689999999999986543210
Q ss_pred eecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcC---CCcEEEEEccchhHhHHHHhcc---------
Q 001888 373 GSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNP---ENQLLLLCKGADSVMFERLSKH--------- 440 (1000)
Q Consensus 373 ~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~--------- 440 (1000)
. .+..|++++.+||+|+||||+++++.. ++++++|+|||||.|+++|+..
T Consensus 443 ------------~------~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l 504 (997)
T TIGR01106 443 ------------E------MRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPL 504 (997)
T ss_pred ------------H------HHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccC
Confidence 0 156788899999999999999998742 2468999999999999999741
Q ss_pred ChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHH-HHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeeccc
Q 001888 441 GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRI-WEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDK 519 (1000)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~ 519 (1000)
+++.++.+.+.+++++++|+||+++|||.++++++.+ |.. +++ ..+.+|+||+|+|+++++||
T Consensus 505 ~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~-----------~~~-----~~~~~e~~L~flGli~i~Dp 568 (997)
T TIGR01106 505 DEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQF-----------DTD-----DVNFPTDNLCFVGLISMIDP 568 (997)
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccc-----------cch-----hhhccccCcEEEEEEeccCC
Confidence 2345677888999999999999999999998754322 110 110 11345899999999999999
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHH
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQI 599 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (1000)
+|++++++|++|+++||+++|+|||++.||.++|+++|++.++.... ..+. .+.
T Consensus 569 lr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~---------~~i~-----------------~~~ 622 (997)
T TIGR01106 569 PRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETV---------EDIA-----------------ARL 622 (997)
T ss_pred ChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccch---------hhhh-----------------hhc
Confidence 99999999999999999999999999999999999999987543210 0000 000
Q ss_pred HhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCcc
Q 001888 600 REGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGAN 679 (1000)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~N 679 (1000)
....... +......++++|.+++.+.++++. ++...++.+||||++|+||.++|+.+|+.|++|+|+|||+|
T Consensus 623 ~~~~~~~----~~~~~~~~vi~G~~l~~l~~~el~----~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~N 694 (997)
T TIGR01106 623 NIPVSQV----NPRDAKACVVHGSDLKDMTSEQLD----EILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVN 694 (997)
T ss_pred ccccccc----ccccccceEEEhHHhhhCCHHHHH----HHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcc
Confidence 0000000 011122479999999887665444 44445566799999999999999999999999999999999
Q ss_pred ChHHhhhcCcccccc--CccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 001888 680 DVGMLQEADIGVGIS--GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYA 755 (1000)
Q Consensus 680 D~~mlk~AdvGIa~~--g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~ 755 (1000)
|+|||++|||||+|+ |+++ |+++||+++.+ |+.+.++ +.|||++|.|+++++.|.+++|+..+++.+++.++.
T Consensus 695 D~paLk~AdVGiamg~~G~~v--ak~aADivL~dd~f~~Iv~a-i~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~ 771 (997)
T TIGR01106 695 DSPALKKADIGVAMGIAGSDV--SKQAADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIAN 771 (997)
T ss_pred cHHHHhhCCcceecCCcccHH--HHHhhceEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHc
Confidence 999999999999884 5666 89999999998 8889999 999999999999999999999999999999998875
Q ss_pred hcCCccchhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccccCCccchhhHHHhh-HHHHHHHHHHHHHH
Q 001888 756 SFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWM-SNGVLSAIIIFFFT 834 (1000)
Q Consensus 756 ~fs~~~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 834 (1000)
. ..+++++|++|+|++++++|+++++.++ ++++.+.++|+ ..+...++++++++.|+ ..|++++++.|+.+
T Consensus 772 ~---~~pl~~~qlL~inli~d~lp~~al~~e~--~~~~~m~~~P~---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~ 843 (997)
T TIGR01106 772 I---PLPLGTITILCIDLGTDMVPAISLAYEK--AESDIMKRQPR---NPKTDKLVNERLISMAYGQIGMIQALGGFFTY 843 (997)
T ss_pred C---cchhHHHHHHHHHHHHHHHHHHHHhcCC--CCcccccCCCc---CCccccccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 3468899999999999999999999843 56666666776 22456888888887765 45888888877766
Q ss_pred Hhhhcccc------ccC---------CCc--cc--c---------hhhhhHHHHHHHHHHHHHHHHH-Hhhcchh----H
Q 001888 835 TNSIFNQA------FRK---------DGH--AV--D---------YEVLGVAMYSSVVWAVNCQMAL-SINYFTW----I 881 (1000)
Q Consensus 835 ~~~~~~~~------~~~---------~g~--~~--~---------~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~----~ 881 (1000)
++.+...+ +.. ++. .. . ...+.|+.|+++++++.+..+. .+...++ +
T Consensus 844 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~ 923 (997)
T TIGR01106 844 FVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGM 923 (997)
T ss_pred HHHHhhcCCccccccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCcccccccCC
Confidence 54332100 000 000 00 0 0135678888888877666542 2221111 3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 001888 882 QHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRF 950 (1000)
Q Consensus 882 ~~~~~~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~~~~~~ll~~~i~k~~~~~~ 950 (1000)
.+..++.++++.++++.+..++|. ++. +|+..++++..|+.++.++++.++..++.|+++|++
T Consensus 924 ~n~~l~~~~~~~~~l~~~~~~~p~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 924 KNKILIFGLFEETALAAFLSYCPG-MGV-----ALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRRN 986 (997)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhhh-hHH-----HhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 566777777777777777777773 233 666788999999999999999999999999888764
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-85 Score=815.10 Aligned_cols=695 Identities=20% Similarity=0.256 Sum_probs=522.5
Q ss_pred EEECCccccCCC----CCeEEeceeecCCCeEEEEEEEecchh---hHhhcCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Q 001888 50 LQYEGKQYPLSP----QQILLRDSKLKNTDYVYGVVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYLLFSTLILI 122 (1000)
Q Consensus 50 ~~~~~~~~~l~~----~n~l~~Gs~l~~tg~~~g~Vv~tG~~T---ki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~ 122 (1000)
..++||+.|+.+ +|++|+||.+.+ |++.|+|++||.+| |+..+...++ +++|+++.++++...+..+.+++
T Consensus 215 S~LTGES~pv~K~~~~~n~v~~GT~v~~-G~~~~iV~~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~ 292 (941)
T TIGR01517 215 SSITGESDPIKKGAPKDSFLLSGTVVNE-GSGRMLVTAVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGS 292 (941)
T ss_pred cccCCCCCcccccCCCCceEEeCCeEEe-eEEEEEEEEeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHH
Confidence 334689888855 489999999996 99999999999999 5555555544 45799999999999988877777
Q ss_pred HHHHHHhhhhh-cccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhh
Q 001888 123 SSTGSVFFGIE-TKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFIN 201 (1000)
Q Consensus 123 ~~i~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~ 201 (1000)
+++.++++.+. ..... |.-.. .+......+...+..++.+++.+|||+|++.++++...++.
T Consensus 293 ~~i~~~~~~~~~~~~~~-------~~~~~-------~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~--- 355 (941)
T TIGR01517 293 AVLLFLVLSLRYVFRII-------RGDGR-------DTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMK--- 355 (941)
T ss_pred HHHHHHHHHHHHHhhhc-------ccccc-------ccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHH---
Confidence 66665544321 10000 00000 00000123455788899999999999999999998888776
Q ss_pred cccccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCC
Q 001888 202 HDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDD 281 (1000)
Q Consensus 202 ~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 281 (1000)
+| +++++++|+++++|+||++++||||||||||+|+|++++++.++..++.+..
T Consensus 356 ---~m----ak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~------------------- 409 (941)
T TIGR01517 356 ---KM----MKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDV------------------- 409 (941)
T ss_pred ---HH----HhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcc-------------------
Confidence 67 8899999999999999999999999999999999999999876654432100
Q ss_pred CCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHH
Q 001888 282 SQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFV 361 (1000)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~ 361 (1000)
.. ..+....+++...++||+..+...++.+ ..+..+||+|.||+
T Consensus 410 -----------------------------~~------~~~~~~~~~l~~~~~~~s~~~~~~~~~~-~~~~~g~p~e~All 453 (941)
T TIGR01517 410 -----------------------------LR------NVPKHVRNILVEGISLNSSSEEVVDRGG-KRAFIGSKTECALL 453 (941)
T ss_pred -----------------------------cc------cCCHHHHHHHHHHHHhCCCCccccCCCC-ccccCCCccHHHHH
Confidence 00 0011234455555666655442211111 12346899999999
Q ss_pred HHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhcc-
Q 001888 362 IAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH- 440 (1000)
Q Consensus 362 ~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~- 440 (1000)
+++++.|..... .+..|++++.+||+|+||||+++++.+++++++|+|||||.++++|+..
T Consensus 454 ~~~~~~~~~~~~------------------~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~ 515 (941)
T TIGR01517 454 GFLLLLGRDYQE------------------VRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRL 515 (941)
T ss_pred HHHHHcCCCHHH------------------HHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHh
Confidence 999887643210 1345778899999999999999999877789999999999999999752
Q ss_pred ---C-----hhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeE
Q 001888 441 ---G-----QQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLG 512 (1000)
Q Consensus 441 ---~-----~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG 512 (1000)
+ .+.++++.+.+++++.+|+||+++|||.++.+++.+| +..|+||+|+|
T Consensus 516 ~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~-----------------------~~~e~~l~~lG 572 (941)
T TIGR01517 516 DSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRK-----------------------DYPNGGLTLIG 572 (941)
T ss_pred hcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccc-----------------------cccccCcEEEE
Confidence 1 0135678889999999999999999999876543211 23478999999
Q ss_pred EeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHH
Q 001888 513 ATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSL 592 (1000)
Q Consensus 513 ~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 592 (1000)
+++++||+|++++++|+.|+++||++||+|||+..||.++|++||+.+++.
T Consensus 573 li~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~----------------------------- 623 (941)
T TIGR01517 573 VVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG----------------------------- 623 (941)
T ss_pred EeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCc-----------------------------
Confidence 999999999999999999999999999999999999999999999976432
Q ss_pred HHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEE
Q 001888 593 ESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTL 672 (1000)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vl 672 (1000)
.+++|++++.+.++++.+... +..||||++|+||.++|+.+|+.|++|+
T Consensus 624 -------------------------~vi~G~~~~~l~~~el~~~i~------~~~Vfar~sPe~K~~iV~~lq~~g~vVa 672 (941)
T TIGR01517 624 -------------------------LAMEGKEFRRLVYEEMDPILP------KLRVLARSSPLDKQLLVLMLKDMGEVVA 672 (941)
T ss_pred -------------------------eEeeHHHhhhCCHHHHHHHhc------cCeEEEECCHHHHHHHHHHHHHCCCEEE
Confidence 155666665554444444332 3459999999999999999999999999
Q ss_pred EEcCCccChHHhhhcCcccccc--CccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q 001888 673 AIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTL 748 (1000)
Q Consensus 673 aiGDG~ND~~mlk~AdvGIa~~--g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~ 748 (1000)
|+|||.||+|||++|||||||+ |++. |+++||+++.+ |+.+.++ +.+||++|.|+++++.|.+++|+..+++.
T Consensus 673 m~GDGvNDapALk~AdVGIAmg~~gtdv--Ak~aADivL~dd~f~~I~~~-i~~gR~~~~ni~k~i~~~l~~n~~~i~~~ 749 (941)
T TIGR01517 673 VTGDGTNDAPALKLADVGFSMGISGTEV--AKEASDIILLDDNFASIVRA-VKWGRNVYDNIRKFLQFQLTVNVVAVILT 749 (941)
T ss_pred EECCCCchHHHHHhCCcceecCCCccHH--HHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999985 5565 99999999995 8889999 79999999999999999999999999999
Q ss_pred HHHHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccccCCccchhhHHHhhHHHHHHHH
Q 001888 749 FWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAI 828 (1000)
Q Consensus 749 ~~~~~~~~fs~~~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (1000)
+++.++.+ ..+++++|++|+|++++++|+++++.. ++++.++++|+. .++.+++++.++..++++|+++++
T Consensus 750 ~~~~~~~~---~~pl~~~qil~inl~~d~~~al~l~~e---~~~~~lm~~~P~---~~~~~li~~~~~~~i~~~~~~~~~ 820 (941)
T TIGR01517 750 FVGSCISS---TSPLTAVQLLWVNLIMDTLAALALATE---PPTEALLDRKPI---GRNAPLISRSMWKNILGQAGYQLV 820 (941)
T ss_pred HHHHHHhc---cccHHHHHHHHHHHHHHHhhHHHHccC---CccHHHHhCCCC---CCCCCcCCHHHHHHHHHHHHHHHH
Confidence 98887753 457999999999999999999999864 344555555552 466788999999999999999999
Q ss_pred HHHHHHHhhhccccccC-CC-cccchhhhhHHHHHHHHHHHHHHHHHHhh-c----c-hhHHHHHHHHHHHHHHHHHHHH
Q 001888 829 IIFFFTTNSIFNQAFRK-DG-HAVDYEVLGVAMYSSVVWAVNCQMALSIN-Y----F-TWIQHFFIWGSIALWYIFLVVY 900 (1000)
Q Consensus 829 ~~~~~~~~~~~~~~~~~-~g-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~----~-~~~~~~~~~~si~~~~~~~~~~ 900 (1000)
+.++++++......... .+ .........|++|.++++.+.+..+.... + | .++.|.+++.++++.+++++++
T Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~ 900 (941)
T TIGR01517 821 VTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVII 900 (941)
T ss_pred HHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHH
Confidence 88877654321000000 00 00012245678888888777666543211 1 1 2345666777777666666554
Q ss_pred hcCCCCCchhhHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH
Q 001888 901 GSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAF 946 (1000)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~~~~~~ll~~~i~k~~ 946 (1000)
.. .++. +|+..++++..|+.+++++++.++..++.|++
T Consensus 901 ~~---~~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 901 VE---FGGS-----FFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HH---HHHH-----HhcccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 42 1122 56678889999999999999999988888875
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-81 Score=775.56 Aligned_cols=674 Identities=20% Similarity=0.233 Sum_probs=517.7
Q ss_pred CCccccCCC----------------CCeEEeceeecCCCeEEEEEEEecchhhH---hhcCCCCCCCccHHHHHHHHHHH
Q 001888 53 EGKQYPLSP----------------QQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVY 113 (1000)
Q Consensus 53 ~~~~~~l~~----------------~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki---~~n~~~~~~k~s~l~~~~n~~~~ 113 (1000)
+||+.|+.+ +|++|+||.+.+ |.+.++|++||.+|.+ .....+....++|+++.++++..
T Consensus 169 TGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~lq~~l~~l~~ 247 (884)
T TIGR01522 169 TGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRC-GHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGK 247 (884)
T ss_pred cCCCcceecccccccccccccccccCceEEeCCEEEe-eeEEEEEEEecCccHHHHHHHHhccCCCCCCcHHHHHHHHHH
Confidence 488887754 269999999996 9999999999999955 44445556668999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHH
Q 001888 114 LLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVK 193 (1000)
Q Consensus 114 ~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~ 193 (1000)
.+.++.++++++.+++.+ +.+. .| ...+..++.+++.+|||+||++++++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~-~~~~--------~~--------------------~~~~~~~v~llv~aiP~~Lp~~vt~~l 298 (884)
T TIGR01522 248 QLSLVSFGVIGVICLVGW-FQGK--------DW--------------------LEMFTISVSLAVAAIPEGLPIIVTVTL 298 (884)
T ss_pred HHHHHHHHHHHHHHHHHH-HhcC--------CH--------------------HHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 887766555544433321 1110 12 236778889999999999999999998
Q ss_pred HHhHHHhhcccccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeecc-chhHHHHHHHhhc
Q 001888 194 VLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGR-VMTEVERTLAKRK 272 (1000)
Q Consensus 194 ~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~-~~~~~~~~~~~~~ 272 (1000)
..++. +| +++++++|+++++|+||++++||||||||||+|+|++.+++..+..+.. +...
T Consensus 299 ~~~~~------r~----ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~--------- 359 (884)
T TIGR01522 299 ALGVL------RM----SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVS--------- 359 (884)
T ss_pred HHHHH------HH----hhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCc---------
Confidence 88877 67 8899999999999999999999999999999999999999876543210 0000
Q ss_pred CCcccccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEee
Q 001888 273 GERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEA 352 (1000)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~ 352 (1000)
... . .....++. ......+....+++.++++||++..+..+ +. ..
T Consensus 360 ---~~~----------~-----------~~~~~~~~------~~~~~~~~~~~~~l~~~~l~~~~~~~~~~--~~---~~ 404 (884)
T TIGR01522 360 ---LNQ----------F-----------GEVIVDGD------VLHGFYTVAVSRILEAGNLCNNAKFRNEA--DT---LL 404 (884)
T ss_pred ---cCC----------C-----------Cccccccc------ccccccCHHHHHHHHHHhhhCCCeecCCC--CC---cC
Confidence 000 0 00000000 00011233566788999999998764322 11 13
Q ss_pred CChhHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcC-CCcEEEEEccchh
Q 001888 353 ESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNP-ENQLLLLCKGADS 431 (1000)
Q Consensus 353 ~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~ 431 (1000)
+||+|.||++++++.|+... ...|+.++++||+|+||||+++++++ ++++++|+|||||
T Consensus 405 g~p~e~All~~~~~~~~~~~--------------------~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape 464 (884)
T TIGR01522 405 GNPTDVALIELLMKFGLDDL--------------------RETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYE 464 (884)
T ss_pred CChHHHHHHHHHHHcCcHhH--------------------HhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChH
Confidence 79999999999998775311 34578889999999999999999864 5678999999999
Q ss_pred HhHHHHhcc----------ChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHH
Q 001888 432 VMFERLSKH----------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAA 501 (1000)
Q Consensus 432 ~i~~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 501 (1000)
.++++|+.. +++.++++.+.+++++.+|+|++++|||.+
T Consensus 465 ~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~------------------------------- 513 (884)
T TIGR01522 465 QVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE------------------------------- 513 (884)
T ss_pred HHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC-------------------------------
Confidence 999999742 133456778889999999999999999865
Q ss_pred HhhhccceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhh
Q 001888 502 EKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQ 581 (1000)
Q Consensus 502 ~~iE~~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~ 581 (1000)
+.+|+|+|+++++||+|++++++|+.|+++||+++|+|||+..||.++|+++|+......
T Consensus 514 ---~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~----------------- 573 (884)
T TIGR01522 514 ---KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ----------------- 573 (884)
T ss_pred ---CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCc-----------------
Confidence 258999999999999999999999999999999999999999999999999999754321
Q ss_pred ccHHHHHHHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHH
Q 001888 582 GDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVT 661 (1000)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV 661 (1000)
+++|.+++.+.++++.+.+. +..+|||++|+||..+|
T Consensus 574 -------------------------------------~v~g~~l~~~~~~~l~~~~~------~~~Vfar~~P~~K~~iv 610 (884)
T TIGR01522 574 -------------------------------------SVSGEKLDAMDDQQLSQIVP------KVAVFARASPEHKMKIV 610 (884)
T ss_pred -------------------------------------eeEhHHhHhCCHHHHHHHhh------cCeEEEECCHHHHHHHH
Confidence 33455544433333333322 34699999999999999
Q ss_pred HHHhcCCCEEEEEcCCccChHHhhhcCcccccc--CccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHH
Q 001888 662 RLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYF 737 (1000)
Q Consensus 662 ~~l~~~~~~vlaiGDG~ND~~mlk~AdvGIa~~--g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~ 737 (1000)
+.+|..|++|+|+|||.||++|+++|||||+|+ |++. ++++||+++.+ |+.+.++ +.+||.+|.|+++++.|.
T Consensus 611 ~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~v--a~~aaDivl~dd~~~~i~~~-i~~gR~~~~ni~k~i~~~ 687 (884)
T TIGR01522 611 KALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDV--AKEAADMILTDDDFATILSA-IEEGKGIFNNIKNFITFQ 687 (884)
T ss_pred HHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHH--HHHhcCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999994 3333 78999999976 7889888 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccccCCccchhhHH
Q 001888 738 FYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRIL 817 (1000)
Q Consensus 738 ~~~n~~~~~~~~~~~~~~~fs~~~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~ 817 (1000)
++.|+..+++.+++.++. ...+++++|++|+|++++.+|+++++.++ ++++.+.++|+ .++.+++++.++.
T Consensus 688 l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~inl~~d~~~a~~l~~e~--~~~~~m~~~P~----~~~~~~~~~~~~~ 758 (884)
T TIGR01522 688 LSTSVAALSLIALATLMG---FPNPLNAMQILWINILMDGPPAQSLGVEP--VDKDVMRKPPR----PRNDKILTKDLIK 758 (884)
T ss_pred hhhhHHHHHHHHHHHHHc---CCCchhHHHHHHHHHHHHhhHHHHhccCC--CChhHhhCCCC----CCCCCccCHHHHH
Confidence 999999888877776653 34579999999999999999999998743 45555555565 5778899999999
Q ss_pred HhhHHHHHHHHHHHHHHHhhhccccccCCCcccchhhhhHHHHHHHHHHHHHHHHHHhh-c---c--hhHHHHHHHHHHH
Q 001888 818 GWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSIN-Y---F--TWIQHFFIWGSIA 891 (1000)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~---~--~~~~~~~~~~si~ 891 (1000)
.++++|++++++.++++++.+.. +. ......|++|.++++.+.++.+.... . + .++.|.++|++++
T Consensus 759 ~~~~~g~~~~~~~~~~~~~~~~~------~~--~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~ 830 (884)
T TIGR01522 759 KILVSAIIIVVGTLFVFVREMQD------GV--ITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVG 830 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC------Cc--chhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHH
Confidence 99999999988877665543321 11 01134567777777766555542111 1 1 2346778888888
Q ss_pred HHHHHHHHHhcCCCCCchhhHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 001888 892 LWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRF 950 (1000)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~~~~~~ll~~~i~k~~~~~~ 950 (1000)
+.++++++..++|. ++. +|+..++++..|+.+++++++.++..++.|+++|++
T Consensus 831 ~~~~~~~~~~~~p~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 831 GSIIGQLLVIYFPP-LQS-----VFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred HHHHHHHHHHHHHH-HHH-----HHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 88888888888773 232 666888999999999999999999999999888654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-78 Score=764.86 Aligned_cols=628 Identities=19% Similarity=0.229 Sum_probs=457.6
Q ss_pred CCCCCeEEeceeecC------CCeEEEEEEEecchh---hHhhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001888 59 LSPQQILLRDSKLKN------TDYVYGVVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVF 129 (1000)
Q Consensus 59 l~~~n~l~~Gs~l~~------tg~~~g~Vv~tG~~T---ki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~ 129 (1000)
.+.+|++|+||.+.. .|.+.|+|++||.+| ++.+....++.+.+++++.+.+++..++.+.++.+++.++.
T Consensus 308 ~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~ 387 (1054)
T TIGR01657 308 TSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIE 387 (1054)
T ss_pred cccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457799999999974 478999999999999 56655555666778899999888777665544333322211
Q ss_pred hhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccccc
Q 001888 130 FGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYE 209 (1000)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~ 209 (1000)
.+..+ .+ ....+++++.+++.+||++||++++++...+.. +|
T Consensus 388 -~~~~~--------~~--------------------~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~------rL--- 429 (1054)
T TIGR01657 388 -LIKDG--------RP--------------------LGKIILRSLDIITIVVPPALPAELSIGINNSLA------RL--- 429 (1054)
T ss_pred -HHHcC--------Cc--------------------HHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHH------HH---
Confidence 11111 01 234788899999999999999999999988877 67
Q ss_pred cCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCC
Q 001888 210 DTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGL 289 (1000)
Q Consensus 210 ~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1000)
++++++|+++..+|.||+++++|||||||||+|+|+|.+++..+....... .
T Consensus 430 -~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~-------------~-------------- 481 (1054)
T TIGR01657 430 -KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLK-------------I-------------- 481 (1054)
T ss_pred -HHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCcccccc-------------c--------------
Confidence 888999999999999999999999999999999999999876432100000 0
Q ss_pred CCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHcCc
Q 001888 290 NGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGF 369 (1000)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~ 369 (1000)
. ..........+..++++||++.... + + ..+||.|.|+++++ |+
T Consensus 482 --------------------~------~~~~~~~~~~~~~~~a~C~~~~~~~----~--~-~~Gdp~E~al~~~~---~~ 525 (1054)
T TIGR01657 482 --------------------V------TEDSSLKPSITHKALATCHSLTKLE----G--K-LVGDPLDKKMFEAT---GW 525 (1054)
T ss_pred --------------------c------ccccccCchHHHHHHHhCCeeEEEC----C--E-EecCHHHHHHHHhC---CC
Confidence 0 0000011234677899999987542 1 1 35899999999975 55
Q ss_pred EEEeecCCe------eEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCC-CcEEEEEccchhHhHHHHhccCh
Q 001888 370 QFFGSSQTS------ISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPE-NQLLLLCKGADSVMFERLSKHGQ 442 (1000)
Q Consensus 370 ~~~~~~~~~------~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~ 442 (1000)
.+....... ..+...+. ...+++++.+||+|+||||||++++++ +++++|+|||||.|+++|++.
T Consensus 526 ~~~~~~~~~~~~~~~~~i~~~~~------~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~-- 597 (1054)
T TIGR01657 526 TLEEDDESAEPTSILAVVRTDDP------PQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE-- 597 (1054)
T ss_pred EEECCCCcccccccccceeccCC------CceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc--
Confidence 543311100 00111111 367999999999999999999999754 568899999999999999854
Q ss_pred hhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccC
Q 001888 443 QFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQK 522 (1000)
Q Consensus 443 ~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~ 522 (1000)
..++++.+.+++|+.+|+|||++|||.+++.+..++.+ .+ .+.+|+||+|+|+++++||+|+
T Consensus 598 ~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~----------~~--------r~~~E~~L~flGli~~~d~lr~ 659 (1054)
T TIGR01657 598 TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQD----------LS--------RDAVESNLTFLGFIVFENPLKP 659 (1054)
T ss_pred CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhh----------cc--------HHHHhcCceEEEEEEEecCCCc
Confidence 35678889999999999999999999997533222110 12 2568999999999999999999
Q ss_pred CcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchh---hHhhhhccHHHHHHHHHHHHHHHH
Q 001888 523 GVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDM---EALEKQGDKENITKVSLESVTKQI 599 (1000)
Q Consensus 523 ~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 599 (1000)
+++++|+.|+++||+++|+|||+..||.+||++|||+.++..++..+...... ..+......+... .. .......
T Consensus 660 ~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~ 737 (1054)
T TIGR01657 660 DTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPF-AS-TQVEIPY 737 (1054)
T ss_pred cHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCcccc-cc-ccccccC
Confidence 99999999999999999999999999999999999998765554443211000 0000000000000 00 0000000
Q ss_pred HhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCcc
Q 001888 600 REGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGAN 679 (1000)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~N 679 (1000)
..... .........+.++++|++++.+.+. ..+.+.++..+++ ||||++|+||.++|+.+|+.|++|+|+|||+|
T Consensus 738 ~~~~~--~~~~~~~~~~~~~itG~~l~~l~~~-~~~~l~~~~~~~~--VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~N 812 (1054)
T TIGR01657 738 PLGQD--SVEDLLASRYHLAMSGKAFAVLQAH-SPELLLRLLSHTT--VFARMAPDQKETLVELLQKLDYTVGMCGDGAN 812 (1054)
T ss_pred ccccc--chhhhcccceEEEEEcHHHHHHHHh-hHHHHHHHHhcCe--EEEecCHHHHHHHHHHHHhCCCeEEEEeCChH
Confidence 00000 0000112345789999999876432 2234555555444 99999999999999999999999999999999
Q ss_pred ChHHhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 001888 680 DVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASF 757 (1000)
Q Consensus 680 D~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~f 757 (1000)
|++|||+|||||||+++| |+.+||+++.+ |+.+.++ +.+||.++.++.++++|.+..++...+..++..+.
T Consensus 813 D~~ALK~AdVGIam~~~d---as~AA~f~l~~~~~~~I~~~-I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~--- 885 (1054)
T TIGR01657 813 DCGALKQADVGISLSEAE---ASVAAPFTSKLASISCVPNV-IREGRCALVTSFQMFKYMALYSLIQFYSVSILYLI--- 885 (1054)
T ss_pred HHHHHHhcCcceeecccc---ceeecccccCCCcHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---
Confidence 999999999999998765 56899999886 7778888 89999999999999999988887775554433222
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccccCCccchhhHHHhhHHHHHHHHHHHHHHHhh
Q 001888 758 SGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNS 837 (1000)
Q Consensus 758 s~~~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (1000)
+ .++.++|++|+|++++.+|+++++..+ +.+.+++.|+ ...++++.++..++.+++++.++.++.+++.
T Consensus 886 -~-~~l~~~Q~l~i~li~~~~~~l~l~~~~---p~~~l~~~~P------~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~ 954 (1054)
T TIGR01657 886 -G-SNLGDGQFLTIDLLLIFPVALLMSRNK---PLKKLSKERP------PSNLFSVYILTSVLIQFVLHILSQVYLVFEL 954 (1054)
T ss_pred -c-CcCccHHHHHHHHHHHHHHHHHHHcCC---chhhcCCCCC------CccccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 457899999999999999999998753 4444554443 3689999999999999999999888887665
Q ss_pred hc
Q 001888 838 IF 839 (1000)
Q Consensus 838 ~~ 839 (1000)
..
T Consensus 955 ~~ 956 (1054)
T TIGR01657 955 HA 956 (1054)
T ss_pred hh
Confidence 43
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-79 Score=751.25 Aligned_cols=642 Identities=18% Similarity=0.212 Sum_probs=475.8
Q ss_pred CeEEeceeecCCCeEEEEEEEecchhhH---hhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccC
Q 001888 63 QILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDID 139 (1000)
Q Consensus 63 n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki---~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~~~~~~ 139 (1000)
|++|+||.+.+ |.+.++|++||.+|.+ ...... +...+++++.++++...+..+.++++.+..++..+. ..
T Consensus 241 n~vfaGT~V~~-G~~~~~V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~-~~--- 314 (903)
T PRK15122 241 NICFMGTNVVS-GTATAVVVATGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT-KG--- 314 (903)
T ss_pred ceEEeCCEEEe-eeEEEEEEEeccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-cC---
Confidence 89999999996 9999999999999965 333333 445689999999998887776666555443332211 10
Q ss_pred CcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccccccCCCcceecc
Q 001888 140 GGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARART 219 (1000)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~ 219 (1000)
+| ...+..++.+++.+|||+||+.++++...++. +| +++++++|+
T Consensus 315 -----~~--------------------~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~------~m----ak~~ilVk~ 359 (903)
T PRK15122 315 -----DW--------------------LEALLFALAVAVGLTPEMLPMIVSSNLAKGAI------AM----ARRKVVVKR 359 (903)
T ss_pred -----CH--------------------HHHHHHHHHHHHHHccchHHHHHHHHHHHHHH------HH----HHcCCeecc
Confidence 12 23677889999999999999999998888877 66 889999999
Q ss_pred ccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCCCCccccCCCc
Q 001888 220 SNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKS 299 (1000)
Q Consensus 220 ~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1000)
++++|+||++++||||||||||+|+|++.+++..+..
T Consensus 360 l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~------------------------------------------- 396 (903)
T PRK15122 360 LNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR------------------------------------------- 396 (903)
T ss_pred cchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC-------------------------------------------
Confidence 9999999999999999999999999999987521100
Q ss_pred cCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHcCcEEEeecCCee
Q 001888 300 VKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSI 379 (1000)
Q Consensus 300 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~ 379 (1000)
.+ .+++...++|... + . ..+||.|.||++++.+.|....
T Consensus 397 --------------------~~---~~~l~~a~l~s~~--~--~-------~~~~p~e~All~~a~~~~~~~~------- 435 (903)
T PRK15122 397 --------------------KD---ERVLQLAWLNSFH--Q--S-------GMKNLMDQAVVAFAEGNPEIVK------- 435 (903)
T ss_pred --------------------Ch---HHHHHHHHHhCCC--C--C-------CCCChHHHHHHHHHHHcCchhh-------
Confidence 00 1233333333111 0 0 1479999999999987664210
Q ss_pred EEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhcc---------ChhhHHHHHH
Q 001888 380 SLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH---------GQQFEAETRR 450 (1000)
Q Consensus 380 ~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~ 450 (1000)
...|+.+.++||++.||||++++++.++++++++||||+.++++|+.. +++.++++.+
T Consensus 436 -------------~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~ 502 (903)
T PRK15122 436 -------------PAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLA 502 (903)
T ss_pred -------------hhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHH
Confidence 345677889999999999999999877889999999999999999742 2334567788
Q ss_pred HHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCCcHHHHHH
Q 001888 451 HINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDK 530 (1000)
Q Consensus 451 ~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v~e~I~~ 530 (1000)
.+++++.+|+|++++|||.++.++..+. ..+..|+|++|+|+++++||+|++++++|+.
T Consensus 503 ~~~~~a~~G~rvlavA~k~~~~~~~~~~---------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~ 561 (903)
T PRK15122 503 LAEAYNADGFRVLLVATREIPGGESRAQ---------------------YSTADERDLVIRGFLTFLDPPKESAAPAIAA 561 (903)
T ss_pred HHHHHHhCCCEEEEEEEeccCccccccc---------------------cccccccCcEEEEEEeccCccHHHHHHHHHH
Confidence 8899999999999999999876432110 0123478999999999999999999999999
Q ss_pred HHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhhcccc
Q 001888 531 LAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAK 610 (1000)
Q Consensus 531 l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (1000)
|+++||+++|+|||+..||.+||+++|+....
T Consensus 562 l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~~------------------------------------------------ 593 (903)
T PRK15122 562 LRENGVAVKVLTGDNPIVTAKICREVGLEPGE------------------------------------------------ 593 (903)
T ss_pred HHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC------------------------------------------------
Confidence 99999999999999999999999999994210
Q ss_pred cCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChHHhhhcCcc
Q 001888 611 ESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIG 690 (1000)
Q Consensus 611 ~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~mlk~AdvG 690 (1000)
+++|.+++.+.++++.+... . ..+|+|++|+||.++|+.+|+.|++|+|+|||.||+|||++||||
T Consensus 594 --------vi~G~el~~~~~~el~~~v~----~--~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVG 659 (903)
T PRK15122 594 --------PLLGTEIEAMDDAALAREVE----E--RTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVG 659 (903)
T ss_pred --------ccchHhhhhCCHHHHHHHhh----h--CCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEE
Confidence 44555665544444433332 2 349999999999999999999999999999999999999999999
Q ss_pred cccc-CccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCccchhhHH
Q 001888 691 VGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWY 767 (1000)
Q Consensus 691 Ia~~-g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~fs~~~~~~~~~ 767 (1000)
|||+ |++. |+++||+++.+ |..+..+ +.+||.+|.|+++++.|.+..|+..+++.++..++. +..++.+.|
T Consensus 660 IAmg~gtdv--AkeaADiVLldd~f~~Iv~a-i~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~---~~~pl~~~q 733 (903)
T PRK15122 660 ISVDSGADI--AKESADIILLEKSLMVLEEG-VIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFI---PFLPMLAIH 733 (903)
T ss_pred EEeCcccHH--HHHhcCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh---ccchhHHHH
Confidence 9996 4444 89999999987 7778888 899999999999999999999998888777766553 234689999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccccCCccchhhHHHhhHHHHHHHHHHHHHHHhhhccccccCCC
Q 001888 768 MSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDG 847 (1000)
Q Consensus 768 ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 847 (1000)
++|.|++++. |.++++..+ ++++.+ +.|+ .++.+++++.+++ ..+.+.+.+++.|++.++.+.. |
T Consensus 734 il~~nli~D~-~~lal~~d~--~~~~~m-~~P~----~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~------~ 798 (903)
T PRK15122 734 LLLQNLMYDI-SQLSLPWDK--MDKEFL-RKPR----KWDAKNIGRFMLW-IGPTSSIFDITTFALMWFVFAA------N 798 (903)
T ss_pred HHHHHHHHHH-HHHhhcCCC--CCHhhc-CCCC----CCChhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhcc------C
Confidence 9999999995 999998753 444444 7776 5666777765543 3333333444444443322211 1
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHH-HhhcchhHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHhccHHHH
Q 001888 848 HAVDYEVLGVAMYSSVVWAVNCQMAL-SINYFTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYW 926 (1000)
Q Consensus 848 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 926 (1000)
.......+.+..|+.+++.+.+.++. +++...++.+...+..+++.++++++..++|.. .+..+|+..++++..|
T Consensus 799 ~~~~~~~~~t~~f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----~~~~~f~~~~l~~~~~ 874 (903)
T PRK15122 799 SVEMQALFQSGWFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFS----PLGAMVGLEPLPWSYF 874 (903)
T ss_pred cHhhhhhhHHHHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHH----HHHHHhCCCCCCHHHH
Confidence 00000124456688887777666542 222223334455555566666666666667731 1122666888899999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHhhc
Q 001888 927 LTTLLVVVSTLLPYFLYRA-FQTRF 950 (1000)
Q Consensus 927 ~~~i~~~~~~ll~~~i~k~-~~~~~ 950 (1000)
++++.+++..++..++.|. +.|++
T Consensus 875 ~~~~~~~~~~~~~~e~~k~~~~r~~ 899 (903)
T PRK15122 875 PWLAATLLGYCLVAQGMKRFYIRRF 899 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999988888888888774 44433
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-76 Score=730.66 Aligned_cols=650 Identities=18% Similarity=0.251 Sum_probs=470.8
Q ss_pred ECCccccCCC---------------CCeEEeceeecCCCeEEEEEEEecchhhH---hhcCCCCCCCccHHHHHHHHHHH
Q 001888 52 YEGKQYPLSP---------------QQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVY 113 (1000)
Q Consensus 52 ~~~~~~~l~~---------------~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki---~~n~~~~~~k~s~l~~~~n~~~~ 113 (1000)
++||+.|+.+ +|++|+||.+.+ |.+.++|++||.+|.+ ......+..+++|+++.++++..
T Consensus 216 LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~-G~~~~vV~atG~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~ 294 (902)
T PRK10517 216 LTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVS-GTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSW 294 (902)
T ss_pred cCCCCCceecccccccccccCccccccceeeCceEee-eeEEEEEEEeccccHHHHHHHHhhccCCCCCcHHHHHHHHHH
Confidence 3588887744 368999999996 9999999999999955 44555666778999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHH
Q 001888 114 LLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVK 193 (1000)
Q Consensus 114 ~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~ 193 (1000)
++..+.++++.+..+++.+... +| ...+..++.+++.+||++||++++++.
T Consensus 295 ~l~~~~~~~~~~v~~i~~~~~~---------~~--------------------~~~l~~alsv~V~~~Pe~LP~~vt~~l 345 (902)
T PRK10517 295 LLIRFMLVMAPVVLLINGYTKG---------DW--------------------WEAALFALSVAVGLTPEMLPMIVTSTL 345 (902)
T ss_pred HHHHHHHHHHHHhhhHHHHhcC---------CH--------------------HHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 8888777777666544322110 12 236778899999999999999999888
Q ss_pred HHhHHHhhcccccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcC
Q 001888 194 VLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKG 273 (1000)
Q Consensus 194 ~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~ 273 (1000)
..++. +| +++++++|+++++|+||++|+||||||||||+|+|++.++.... +.
T Consensus 346 a~g~~------~m----ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~---~~-------------- 398 (902)
T PRK10517 346 ARGAV------KL----SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS---GK-------------- 398 (902)
T ss_pred HHHHH------HH----HhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCC---CC--------------
Confidence 88777 66 88999999999999999999999999999999999998753100 00
Q ss_pred CcccccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeC
Q 001888 274 ERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAE 353 (1000)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~ 353 (1000)
. .++++...++|.... . ..+
T Consensus 399 ----------------------------------------------~---~~~ll~~a~l~~~~~----~-------~~~ 418 (902)
T PRK10517 399 ----------------------------------------------T---SERVLHSAWLNSHYQ----T-------GLK 418 (902)
T ss_pred ----------------------------------------------C---HHHHHHHHHhcCCcC----C-------CCC
Confidence 0 013444445543221 0 137
Q ss_pred ChhHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHh
Q 001888 354 SPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVM 433 (1000)
Q Consensus 354 sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i 433 (1000)
||.|.|+++++...+.. .....|+.+.++||||+||||++++++.++.+.+++|||+|.+
T Consensus 419 ~p~d~All~~a~~~~~~--------------------~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~i 478 (902)
T PRK10517 419 NLLDTAVLEGVDEESAR--------------------SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEI 478 (902)
T ss_pred CHHHHHHHHHHHhcchh--------------------hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHH
Confidence 99999999988653200 0135677888999999999999999877777889999999999
Q ss_pred HHHHhcc---------ChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhh
Q 001888 434 FERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKI 504 (1000)
Q Consensus 434 ~~~~~~~---------~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i 504 (1000)
+++|+.. +++.++++.+..++++.+|+||+++|||.++.++. ++ ....
T Consensus 479 l~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~-~~----------------------~~~~ 535 (902)
T PRK10517 479 LNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREG-DY----------------------QRAD 535 (902)
T ss_pred HHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCcccc-cc----------------------cccc
Confidence 9999752 22345677788899999999999999998865421 00 0113
Q ss_pred hccceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccH
Q 001888 505 ERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDK 584 (1000)
Q Consensus 505 E~~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~ 584 (1000)
|+|++|+|+++++||+||+++++|++|+++||+++|+|||+..||.+||+++||..+.
T Consensus 536 e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~---------------------- 593 (902)
T PRK10517 536 ESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGE---------------------- 593 (902)
T ss_pred ccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCccC----------------------
Confidence 6899999999999999999999999999999999999999999999999999994210
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH
Q 001888 585 ENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV 664 (1000)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l 664 (1000)
+++|.+++.+.++++.+... . ..+|+|++|+||.++|+.+
T Consensus 594 ----------------------------------v~~G~el~~l~~~el~~~~~----~--~~VfAr~sPe~K~~IV~~L 633 (902)
T PRK10517 594 ----------------------------------VLIGSDIETLSDDELANLAE----R--TTLFARLTPMHKERIVTLL 633 (902)
T ss_pred ----------------------------------ceeHHHHHhCCHHHHHHHHh----h--CcEEEEcCHHHHHHHHHHH
Confidence 44555555444434433332 2 2499999999999999999
Q ss_pred hcCCCEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHH
Q 001888 665 KGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNL 742 (1000)
Q Consensus 665 ~~~~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~ 742 (1000)
|+.|++|+|+|||.||+|||++|||||||++. ...|+++||+++.+ |..+..+ +.+||.+|.|+++++.|.+..|+
T Consensus 634 q~~G~vVam~GDGvNDaPALk~ADVGIAmg~g-tdvAkeaADiVLldd~~~~I~~a-i~~gR~i~~nI~k~i~~~ls~n~ 711 (902)
T PRK10517 634 KREGHVVGFMGDGINDAPALRAADIGISVDGA-VDIAREAADIILLEKSLMVLEEG-VIEGRRTFANMLKYIKMTASSNF 711 (902)
T ss_pred HHCCCEEEEECCCcchHHHHHhCCEEEEeCCc-CHHHHHhCCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999632 23399999999997 6678888 89999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccccCCccchhhHH-HhhH
Q 001888 743 TFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRIL-GWMS 821 (1000)
Q Consensus 743 ~~~~~~~~~~~~~~fs~~~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~-~~~~ 821 (1000)
..++..++..++. +..++.+.|++|.|++++ +|.++++.++ ++..+++.|+.+ +.+.+. ..++
T Consensus 712 ~~v~~~~~~~~~~---~~~pl~~~qiL~inl~~D-~~~~al~~d~---~~~~~m~~p~r~---------~~~~~~~~~~~ 775 (902)
T PRK10517 712 GNVFSVLVASAFL---PFLPMLPLHLLIQNLLYD-VSQVAIPFDN---VDDEQIQKPQRW---------NPADLGRFMVF 775 (902)
T ss_pred HHHHHHHHHHHHh---hhhhhHHHHHHHHHHHHH-HhHHhhcCCC---CChhhhcCCCCC---------CHHHHHHHHHH
Confidence 9988888876663 224689999999999999 7899998754 334455556521 111122 2345
Q ss_pred HHHHHHHHHHHHHHhhhccccccCCCcccchhhhhHHHHHHHHHHHHHHHHH-HhhcchhHHHHHHHHHHHHHHHHHHHH
Q 001888 822 NGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMAL-SINYFTWIQHFFIWGSIALWYIFLVVY 900 (1000)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~si~~~~~~~~~~ 900 (1000)
.|++.+++.+..+++.+.. ++.... .....+.+..|+.+++.+.+.++. +++...++.+...+..+++.++++++.
T Consensus 776 ~g~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~F~~~~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (902)
T PRK10517 776 FGPISSIFDILTFCLMWWV--FHANTP-ETQTLFQSGWFVVGLLSQTLIVHMIRTRRIPFIQSRAAWPLMIMTLIVMAVG 852 (902)
T ss_pred HHHHHHHHHHHHHHHHHHH--ccccch-hhHhHHHHHHHHHHHHHHHHHHHhhccCCCCcccchHHHHHHHHHHHHHHHH
Confidence 5555444333332221110 110000 000123334477777776666542 222223455666777777777777766
Q ss_pred hcCCCCCchhhHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHH-HHHhhc
Q 001888 901 GSLPPTFSTTAYKVLVEACAPS--ILYWLTTLLVVVSTLLPYFLYR-AFQTRF 950 (1000)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~--~~~w~~~i~~~~~~ll~~~i~k-~~~~~~ 950 (1000)
.++|.. ....+|+..+++ +..|+.++.++.. ++ .++.| .+.|+|
T Consensus 853 ~~~p~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~-~e~~K~~~~~~~ 899 (902)
T PRK10517 853 IALPFS----PLASYLQLQALPLSYFPWLVAILAGYM-TL-TQLVKGFYSRRY 899 (902)
T ss_pred HHhhHH----HHHHhhCCcCCChhHHHHHHHHHHHHH-HH-HHHHHHHHHHhh
Confidence 666621 112255566666 5677777666655 33 44444 444443
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-76 Score=728.63 Aligned_cols=643 Identities=19% Similarity=0.228 Sum_probs=468.9
Q ss_pred ECCccccCCC---------------CCeEEeceeecCCCeEEEEEEEecchhhH---hhcCCCCCCCccHHHHHHHHHHH
Q 001888 52 YEGKQYPLSP---------------QQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVY 113 (1000)
Q Consensus 52 ~~~~~~~l~~---------------~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki---~~n~~~~~~k~s~l~~~~n~~~~ 113 (1000)
++||+.|+.+ +|++|+||.+.+ |.+.|+|++||.+|.+ ...... +.+++|+++.++++..
T Consensus 182 LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~-G~~~~~V~~tG~~T~~gki~~~v~~-~~~~t~lq~~~~~i~~ 259 (867)
T TIGR01524 182 LTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLS-GHAQAVVLATGSSTWFGSLAIAATE-RRGQTAFDKGVKSVSK 259 (867)
T ss_pred ccCCCCcccccCCccccccccccccccceecCCeEEE-eEEEEEEEEEcCccHHHHHHHHhhC-CCCCCcHHHHHHHHHH
Confidence 3588888754 368999999996 9999999999999955 444444 5556899999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHH
Q 001888 114 LLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVK 193 (1000)
Q Consensus 114 ~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~ 193 (1000)
++..+.++++++.++++.+... .| ...+..++.+++.+||++||++++++.
T Consensus 260 ~~~~~~~~~~~i~~~~~~~~~~---------~~--------------------~~~~~~al~l~v~~iP~~Lp~~vt~~l 310 (867)
T TIGR01524 260 LLIRFMLVMVPVVLMINGLMKG---------DW--------------------LEAFLFALAVAVGLTPEMLPMIVSSNL 310 (867)
T ss_pred HHHHHHHHHHHHheehHHHhcC---------CH--------------------HHHHHHHHHHHHHhCcchHHHHHHHHH
Confidence 9988887777766544322110 12 236778899999999999999999988
Q ss_pred HHhHHHhhcccccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcC
Q 001888 194 VLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKG 273 (1000)
Q Consensus 194 ~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~ 273 (1000)
..++. +| +++++++|+++++|+||++++||||||||||+|+|++.+++.... .
T Consensus 311 a~g~~------~m----ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~---~-------------- 363 (867)
T TIGR01524 311 AKGAI------NM----SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG---E-------------- 363 (867)
T ss_pred HHHHH------HH----HhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC---C--------------
Confidence 88877 66 889999999999999999999999999999999999988641100 0
Q ss_pred CcccccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeC
Q 001888 274 ERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAE 353 (1000)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~ 353 (1000)
...+++...++|+... . ..+
T Consensus 364 -------------------------------------------------~~~~~l~~a~l~~~~~----~-------~~~ 383 (867)
T TIGR01524 364 -------------------------------------------------TSERVLKMAWLNSYFQ----T-------GWK 383 (867)
T ss_pred -------------------------------------------------CHHHHHHHHHHhCCCC----C-------CCC
Confidence 0012344444443221 0 136
Q ss_pred ChhHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHh
Q 001888 354 SPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVM 433 (1000)
Q Consensus 354 sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i 433 (1000)
||.|.|+++++.+.+... ....|+.++.+||||+||||+++++++++..++++||||+.+
T Consensus 384 ~p~~~Al~~~~~~~~~~~--------------------~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~i 443 (867)
T TIGR01524 384 NVLDHAVLAKLDESAARQ--------------------TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEM 443 (867)
T ss_pred ChHHHHHHHHHHhhchhh--------------------HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHH
Confidence 999999999987532110 034677788999999999999999976666889999999999
Q ss_pred HHHHhcc---------ChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhh
Q 001888 434 FERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKI 504 (1000)
Q Consensus 434 ~~~~~~~---------~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i 504 (1000)
+++|+.. +++.++++.+.+++++.+|+|++++|||+++.++.. + .+..
T Consensus 444 l~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~-~----------------------~~~~ 500 (867)
T TIGR01524 444 LTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEAD-F----------------------TKTD 500 (867)
T ss_pred HHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCccccc-c----------------------cccc
Confidence 9999742 233456788889999999999999999998764310 0 0123
Q ss_pred hccceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccH
Q 001888 505 ERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDK 584 (1000)
Q Consensus 505 E~~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~ 584 (1000)
|++|+|+|+++++||+|++++++|++|+++||+++|+|||+..||.++|+++|+..+.
T Consensus 501 e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~---------------------- 558 (867)
T TIGR01524 501 EEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAND---------------------- 558 (867)
T ss_pred cCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC----------------------
Confidence 6899999999999999999999999999999999999999999999999999995321
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH
Q 001888 585 ENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV 664 (1000)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l 664 (1000)
+++|.+++.+.++++.+.. . +..+|+|++|+||.++|+.+
T Consensus 559 ----------------------------------v~~g~~l~~~~~~el~~~~----~--~~~vfAr~~Pe~K~~iV~~l 598 (867)
T TIGR01524 559 ----------------------------------FLLGADIEELSDEELAREL----R--KYHIFARLTPMQKSRIIGLL 598 (867)
T ss_pred ----------------------------------eeecHhhhhCCHHHHHHHh----h--hCeEEEECCHHHHHHHHHHH
Confidence 3344444433333333322 2 23499999999999999999
Q ss_pred hcCCCEEEEEcCCccChHHhhhcCccccccC-ccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHH
Q 001888 665 KGTGKTTLAIGDGANDVGMLQEADIGVGISG-VEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKN 741 (1000)
Q Consensus 665 ~~~~~~vlaiGDG~ND~~mlk~AdvGIa~~g-~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n 741 (1000)
|+.|++|+|+|||.||+|||++|||||||++ ++. |+++||+++.+ |..+..+ +.+||.+|.|+++++.|.+..|
T Consensus 599 q~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdv--Ak~aADiVLldd~~~~I~~a-i~~gR~i~~ni~k~i~~~ls~n 675 (867)
T TIGR01524 599 KKAGHTVGFLGDGINDAPALRKADVGISVDTAADI--AKEASDIILLEKSLMVLEEG-VIEGRNTFGNILKYLKMTASSN 675 (867)
T ss_pred HhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHH--HHHhCCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999963 444 89999999997 7778888 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccccCCccchhhHHHhhH
Q 001888 742 LTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMS 821 (1000)
Q Consensus 742 ~~~~~~~~~~~~~~~fs~~~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~ 821 (1000)
+..++..++..++. +..++.+.|++|.|++++ +|+++++..+ ++..+++.|+- ++... ....++.
T Consensus 676 ~~~~~~~~~~~~~~---~~~pl~~~qil~inl~~d-~~~~al~~~~---~~~~~m~~p~~----~~~~~----~~~~~~~ 740 (867)
T TIGR01524 676 FGNVFSVLVASAFI---PFLPMLSLHLLIQNLLYD-FSQLTLPWDK---MDREFLKKPHQ----WEQKG----MGRFMLC 740 (867)
T ss_pred HHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHH-HHHHhhcCCC---CChHhhCCCCC----CChhh----HHHHHHH
Confidence 99888877766653 224699999999999999 7999998753 34445566652 22221 2222344
Q ss_pred HHHHHHHHHHHHHHhhhccccccCCCcccchhhhhHHHHHHHHHHHHHHHHHH-hhcchhHHHHHHHHHHHHHHHHHHHH
Q 001888 822 NGVLSAIIIFFFTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALS-INYFTWIQHFFIWGSIALWYIFLVVY 900 (1000)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~si~~~~~~~~~~ 900 (1000)
.|++.+++.+..++..+.. +...+. .....+.+..|+.+++.+.+.++.. ++...++.+...+.++++.++++++.
T Consensus 741 ~g~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~~~~~n~~~~~~~~~~~~~~~~~ 817 (867)
T TIGR01524 741 IGPVSSIFDIATFLLMWFV--FSANTV-EEQALFQSGWFVVGLLSQTLVVHMIRTEKIPFIQSRAAAPVMIATLLVMALG 817 (867)
T ss_pred HHHHHHHHHHHHHHHHHHH--hcccch-hhhhHHHHHHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHH
Confidence 5554444333222221110 000111 0011245666888887776666432 22223455677777777777777777
Q ss_pred hcCCCC-CchhhHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHH
Q 001888 901 GSLPPT-FSTTAYKVLVEACAP--SILYWLTTLLVVVSTLLPYFLYRA 945 (1000)
Q Consensus 901 ~~~~~~-~~~~~~~~~~~~~~~--~~~~w~~~i~~~~~~ll~~~i~k~ 945 (1000)
.++|.. ++. +|+..++ .+..|+.++.++++ +..++.|.
T Consensus 818 ~~~p~~~~~~-----~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~ 858 (867)
T TIGR01524 818 IIIPFSPLGH-----SIGLVSLPLSYFPWLIAILVGYM--ATMQLVKT 858 (867)
T ss_pred HHhchhhhhh-----hhccccCCccHHHHHHHHHHHHH--HHHHHHHH
Confidence 777742 222 4445544 45567777666654 34455553
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-75 Score=649.36 Aligned_cols=722 Identities=18% Similarity=0.243 Sum_probs=547.6
Q ss_pred cCCCCCeEEeceeecCCCeEEEEEEEecchhhHhh---cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 001888 58 PLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ---NATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIET 134 (1000)
Q Consensus 58 ~l~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki~~---n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~ 134 (1000)
|++..|+-+.+|.+.. |.++|+|++||.+|.+.+ ...+....++|+++.+++++.++..+.+++.+..+++....
T Consensus 232 ~~Et~Ni~f~st~~ve-G~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~- 309 (1019)
T KOG0203|consen 232 PLETRNIAFFSTNCVE-GTGRGIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL- 309 (1019)
T ss_pred chhheeeeeeeeEEec-ceEEEEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh-
Confidence 4677899999999996 999999999999996633 34455678899999999999999888777776665554433
Q ss_pred ccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccccccCCCc
Q 001888 135 KRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKP 214 (1000)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~ 214 (1000)
+. .| +..+..++.+.+..+|.+|+++++....+-+. +| ++++
T Consensus 310 gy--------~~--------------------l~avv~~i~iivAnvPeGL~~tvTv~Ltltak------rM----a~Kn 351 (1019)
T KOG0203|consen 310 GY--------EW--------------------LRAVVFLIGIIVANVPEGLLATVTVCLTLTAK------RM----ARKN 351 (1019)
T ss_pred cc--------hh--------------------HHHhhhhheeEEecCcCCccceehhhHHHHHH------HH----hhce
Confidence 11 22 33455588899999999999999999888888 67 8899
Q ss_pred ceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCCCCccc
Q 001888 215 ARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIV 294 (1000)
Q Consensus 215 ~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1000)
+++|++.++|+||..++||||||||||+|+|+|.++|.++.....+..+. +++
T Consensus 352 c~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~------~~~--------------------- 404 (1019)
T KOG0203|consen 352 CLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTED------QSG--------------------- 404 (1019)
T ss_pred eEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhh------hhc---------------------
Confidence 99999999999999999999999999999999999999876543321110 000
Q ss_pred cCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCC-Cce-EEeeCChhHHHHHHHHHHcCcEEE
Q 001888 295 ESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEET-GEI-SYEAESPDEAAFVIAAREVGFQFF 372 (1000)
Q Consensus 295 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~-~~~-~~~~~sp~e~al~~~a~~~g~~~~ 372 (1000)
......+.....+.++..+||.+..+..+.+ ... .-..+++.|.||++++.-.--..
T Consensus 405 --------------------~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~- 463 (1019)
T KOG0203|consen 405 --------------------QSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV- 463 (1019)
T ss_pred --------------------ccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH-
Confidence 0011124567789999999999987643321 111 22358999999999987532111
Q ss_pred eecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCC---CcEEEEEccchhHhHHHHhcc---------
Q 001888 373 GSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPE---NQLLLLCKGADSVMFERLSKH--------- 440 (1000)
Q Consensus 373 ~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~---~~~~l~~KGa~~~i~~~~~~~--------- 440 (1000)
...++.++.+.++||+|.+|..-.+.+..+ .++.+.+|||||.++++|+..
T Consensus 464 -----------------~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pl 526 (1019)
T KOG0203|consen 464 -----------------MELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPL 526 (1019)
T ss_pred -----------------HHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCc
Confidence 112678889999999999999999988654 478999999999999999863
Q ss_pred ChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccc
Q 001888 441 GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKL 520 (1000)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~l 520 (1000)
++...+.+.+...++...|-||+.||++.++++++.+..+-.-+. . +.--.++.|+|++++-||+
T Consensus 527 d~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~--------------~-n~p~~nl~FlGl~s~idPP 591 (1019)
T KOG0203|consen 527 DEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDD--------------V-NFPTDNLRFLGLISMIDPP 591 (1019)
T ss_pred CHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCC--------------C-CCcchhccccchhhccCCC
Confidence 345677888899999999999999999999988665422110000 0 1112589999999999999
Q ss_pred cCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHH
Q 001888 521 QKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIR 600 (1000)
Q Consensus 521 r~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (1000)
|..+|+++.++|.||||++|+|||++.||.++|++.||+..+..... .+..++.
T Consensus 592 R~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e--------------------------~~a~r~~ 645 (1019)
T KOG0203|consen 592 RAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVE--------------------------DIAKRLN 645 (1019)
T ss_pred cccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhh--------------------------hhHHhcC
Confidence 99999999999999999999999999999999999998875432210 0001110
Q ss_pred hhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccC
Q 001888 601 EGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGAND 680 (1000)
Q Consensus 601 ~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND 680 (1000)
.... ..+.....+.++.|.++..+..+++.+.+ .....+||+|.||+||..||+..|+.|.+|+.+|||+||
T Consensus 646 ~~v~----~vn~~~a~a~VihG~eL~~~~~~qld~il----~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVND 717 (1019)
T KOG0203|consen 646 IPVE----QVNSRDAKAAVIHGSELPDMSSEQLDELL----QNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVND 717 (1019)
T ss_pred Cccc----ccCccccceEEEecccccccCHHHHHHHH----HhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCC
Confidence 0000 11122346789999999877766555444 455668999999999999999999999999999999999
Q ss_pred hHHhhhcCccccc--cCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 001888 681 VGMLQEADIGVGI--SGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYAS 756 (1000)
Q Consensus 681 ~~mlk~AdvGIa~--~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~ 756 (1000)
.||||.||||||| +|++. +|++||+++.| |..++.- +.+||.+|+|++|.|.|.+..|+..+.+.++|.++
T Consensus 718 sPALKKADIGVAMGiaGSDv--sKqAADmILLDDNFASIVtG-VEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~-- 792 (1019)
T KOG0203|consen 718 SPALKKADIGVAMGIAGSDV--SKQAADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILF-- 792 (1019)
T ss_pred ChhhcccccceeeccccchH--HHhhcceEEecCcchhheee-cccceehhhhHHHHHHHHHHhcchhHhHHHHHHHh--
Confidence 9999999999987 67777 89999999998 5556666 89999999999999999999999999999999887
Q ss_pred cCCccc-hhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccccCCccchhhH-HHhhHHHHHHHHHHHHHH
Q 001888 757 FSGRPA-YNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRI-LGWMSNGVLSAIIIFFFT 834 (1000)
Q Consensus 757 fs~~~~-~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 834 (1000)
|.|+ +..+.++.+++..+++|++.++.+. +.++.|.+.|+ ....+++.|.+.+ ..++..|.+|++..|+.+
T Consensus 793 --giPLplgtitIL~IDLgTDmvPAiSLAYE~--aEsDIM~r~PR---~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tY 865 (1019)
T KOG0203|consen 793 --GIPLPLGTVTILCIDLGTDIVPAISLAYEK--AESDIMLRPPR---NPKDDKLVNKRLISYSYLQIGMIQALAGFFTY 865 (1019)
T ss_pred --CCCcccchhhhhhhHhhcccchhhhHhccC--chhhHHhcCCC---CCcccccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 5666 8899999999999999999998764 45555666666 3356778888776 458899999999999998
Q ss_pred Hhhhcccccc---------------------CCCcccch-------hhhhHHHHHHHHHHHHHHHHH-Hhhcch----hH
Q 001888 835 TNSIFNQAFR---------------------KDGHAVDY-------EVLGVAMYSSVVWAVNCQMAL-SINYFT----WI 881 (1000)
Q Consensus 835 ~~~~~~~~~~---------------------~~g~~~~~-------~~~~~~~~~~~v~~~~~~~~~-~~~~~~----~~ 881 (1000)
+..+...++. ..|..-.+ ++..+..|.+++.++-..+++ .++.-+ -+
T Consensus 866 Fvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGm 945 (1019)
T KOG0203|consen 866 FVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGM 945 (1019)
T ss_pred HHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhh
Confidence 8776544331 11222211 123344444555544333332 222222 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 001888 882 QHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFR 951 (1000)
Q Consensus 882 ~~~~~~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~~~~~~ll~~~i~k~~~~~~~ 951 (1000)
.|..+++++++-.++..++++.|. .. ..++..++.+.+|+..+...+..++.+++.|++.|.|.
T Consensus 946 rN~vl~f~v~~e~~La~fl~y~pg-~~-----~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~P 1009 (1019)
T KOG0203|consen 946 RNKVLIFAVIFETCLACFLCYCPG-VL-----YALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRYP 1009 (1019)
T ss_pred hhhhHHHHHHHHHHHHHHHhcCcc-HH-----HHhccCCCCcEEEEecccceeeeeeHHHHHhHhhhhCC
Confidence 455677788877777777888883 12 25556778889999989999999999999999998763
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-71 Score=676.40 Aligned_cols=577 Identities=19% Similarity=0.252 Sum_probs=441.6
Q ss_pred eEEEE-EEE-----CCccccCCC--CCeEEeceeecCCCeEEEEEEEecchhhH---hhcCCCCCCCccHHHHHHHHHHH
Q 001888 45 SFVGT-LQY-----EGKQYPLSP--QQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVY 113 (1000)
Q Consensus 45 ~F~G~-~~~-----~~~~~~l~~--~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki---~~n~~~~~~k~s~l~~~~n~~~~ 113 (1000)
-.+|. +.+ +||+.|+.+ +|.+|+||.+.+ |.+.++|+.||.+|.+ .+...+++.+++++|+.++++..
T Consensus 130 vi~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~-G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~ 208 (755)
T TIGR01647 130 LFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQ-GEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGL 208 (755)
T ss_pred EEecCceEEEcccccCCccceEeccCCeeeccCEEEc-cEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHH
Confidence 34565 555 489999855 599999999996 9999999999999965 44455566667899999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHH
Q 001888 114 LLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVK 193 (1000)
Q Consensus 114 ~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~ 193 (1000)
++.++.++++++.++++.+..+. +| ...+..++.+++.+|||+||+.++++.
T Consensus 209 ~~~~~~~~~~~i~~~~~~~~~~~--------~~--------------------~~~~~~~i~vlv~a~P~~Lp~~~~~~l 260 (755)
T TIGR01647 209 FLIVLIGVLVLIELVVLFFGRGE--------SF--------------------REGLQFALVLLVGGIPIAMPAVLSVTM 260 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC--------CH--------------------HHHHHHHHHHHHHhCCcchHHHHHHHH
Confidence 99888888777766554331111 12 336778899999999999999999998
Q ss_pred HHhHHHhhcccccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcC
Q 001888 194 VLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKG 273 (1000)
Q Consensus 194 ~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~ 273 (1000)
..++. +| +++++++|+++++|+||.+|+||||||||||+|+|++.+++..+..++
T Consensus 261 a~g~~------r~----ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~--------------- 315 (755)
T TIGR01647 261 AVGAA------EL----AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFD--------------- 315 (755)
T ss_pred HHHHH------HH----HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCC---------------
Confidence 88877 66 889999999999999999999999999999999999999875431110
Q ss_pred CcccccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeC
Q 001888 274 ERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAE 353 (1000)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~ 353 (1000)
..+++...++|+.. .++
T Consensus 316 --------------------------------------------------~~~~l~~a~~~~~~-------------~~~ 332 (755)
T TIGR01647 316 --------------------------------------------------KDDVLLYAALASRE-------------EDQ 332 (755)
T ss_pred --------------------------------------------------HHHHHHHHHHhCCC-------------CCC
Confidence 01244555566420 137
Q ss_pred ChhHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCC-CcEEEEEccchhH
Q 001888 354 SPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPE-NQLLLLCKGADSV 432 (1000)
Q Consensus 354 sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~ 432 (1000)
||.|.|+++++++.+. ....|+++..+||++.+|+|++++++++ |+.++++||||+.
T Consensus 333 ~pi~~Ai~~~~~~~~~----------------------~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~ 390 (755)
T TIGR01647 333 DAIDTAVLGSAKDLKE----------------------ARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQV 390 (755)
T ss_pred ChHHHHHHHHHHHhHH----------------------HHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHH
Confidence 9999999998876431 0345778889999999999999998764 7788999999999
Q ss_pred hHHHHhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeE
Q 001888 433 MFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLG 512 (1000)
Q Consensus 433 i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG 512 (1000)
++++|+.. .+.++++.+.+++++.+|+|++++|+|.. |++|+|+|
T Consensus 391 il~~c~~~-~~~~~~~~~~~~~~~~~G~rvl~vA~~~~----------------------------------e~~l~~~G 435 (755)
T TIGR01647 391 ILDLCDNK-KEIEEKVEEKVDELASRGYRALGVARTDE----------------------------------EGRWHFLG 435 (755)
T ss_pred HHHhcCCc-HHHHHHHHHHHHHHHhCCCEEEEEEEEcC----------------------------------CCCcEEEE
Confidence 99999754 24567788889999999999999999721 36899999
Q ss_pred EeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHH
Q 001888 513 ATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSL 592 (1000)
Q Consensus 513 ~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 592 (1000)
+++++||+||+++++|++|+++||+++|+|||+..||.++|+++|+..+. ..++ .
T Consensus 436 li~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~-----~~~~-----~--------------- 490 (755)
T TIGR01647 436 LLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNI-----YTAD-----V--------------- 490 (755)
T ss_pred EeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-----cCHH-----H---------------
Confidence 99999999999999999999999999999999999999999999996421 0000 0
Q ss_pred HHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEE
Q 001888 593 ESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTL 672 (1000)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vl 672 (1000)
+.+|.+.+.+.++++.+. ...+ .+|+|++|+||.++|+.+|+.|++|+
T Consensus 491 --------------------------l~~~~~~~~~~~~~~~~~----~~~~--~vfAr~~Pe~K~~iV~~lq~~G~~Va 538 (755)
T TIGR01647 491 --------------------------LLKGDNRDDLPSGELGEM----VEDA--DGFAEVFPEHKYEIVEILQKRGHLVG 538 (755)
T ss_pred --------------------------hcCCcchhhCCHHHHHHH----HHhC--CEEEecCHHHHHHHHHHHHhcCCEEE
Confidence 011111111112222222 2222 39999999999999999999999999
Q ss_pred EEcCCccChHHhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 001888 673 AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFW 750 (1000)
Q Consensus 673 aiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~ 750 (1000)
|+|||.||+|+|++|||||+|++. ...|+++||+++.+ |..+..+ +.+||.+|+|+++++.|.+..|+..+++.++
T Consensus 539 mvGDGvNDapAL~~AdVGIAm~~g-tdvAkeaADivLl~d~l~~I~~a-i~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~ 616 (755)
T TIGR01647 539 MTGDGVNDAPALKKADVGIAVAGA-TDAARSAADIVLTEPGLSVIVDA-ILESRKIFQRMKSYVIYRIAETIRIVFFFGL 616 (755)
T ss_pred EEcCCcccHHHHHhCCeeEEecCC-cHHHHHhCCEEEEcCChHHHHHH-HHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 999999999999999999999532 22389999999997 6778888 8999999999999999999999998877777
Q ss_pred HHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccccCCccchhhHHHhhHHHHHHHHHH
Q 001888 751 YEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIII 830 (1000)
Q Consensus 751 ~~~~~~fs~~~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (1000)
..++.++ + ++++|++|.|++++. |.++++..+.+++ +.| +...++ +.+...+..|++.++..
T Consensus 617 ~~l~~~~---~-l~~~~il~~~l~~d~-~~~~l~~~~~~~~-----~~p-------~~~~~~-~~~~~~~~~g~~~~~~~ 678 (755)
T TIGR01647 617 LILILNF---Y-FPPIMVVIIAILNDG-TIMTIAYDNVKPS-----KLP-------QRWNLR-EVFTMSTVLGIYLVIST 678 (755)
T ss_pred HHHHhCc---c-hhHHHHHHHHHHHhH-hHhhccCCCCCCC-----CCC-------CccchH-HHHHHHHHHHHHHHHHH
Confidence 6654432 3 899999999999995 6888877653321 222 222222 44555677888888877
Q ss_pred HHHHHhhhccccc-cCCCcccchhhhhHHHHHHHHHHHHHHHH
Q 001888 831 FFFTTNSIFNQAF-RKDGHAVDYEVLGVAMYSSVVWAVNCQMA 872 (1000)
Q Consensus 831 ~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~v~~~~~~~~ 872 (1000)
|.++++.+....+ ...+.......+.|+.|+.+++.+.+.++
T Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~ 721 (755)
T TIGR01647 679 FLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSISGQATIF 721 (755)
T ss_pred HHHHHHHHhcccchhcccccccHhhhHHHHHHHHHHHHHHHHh
Confidence 7776655431000 01111112335789999999988877775
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-68 Score=603.05 Aligned_cols=645 Identities=19% Similarity=0.269 Sum_probs=444.9
Q ss_pred CCCeEEeceeecC-----CCeEEEEEEEecchh---hHhhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 001888 61 PQQILLRDSKLKN-----TDYVYGVVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGI 132 (1000)
Q Consensus 61 ~~n~l~~Gs~l~~-----tg~~~g~Vv~tG~~T---ki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~ 132 (1000)
..|.+|.||++.. .+.+.|+|++||-.| ++.++.-.++.-..++-+..-+++..+.++ +++.++...+
T Consensus 331 ~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l~~i----a~~gfiy~~i 406 (1140)
T KOG0208|consen 331 SRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYRDSFKFILFLVII----ALIGFIYTAI 406 (1140)
T ss_pred CcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHHHHHHHHHHHHHHH----HHHHHHHHhH
Confidence 3466777777643 467899999999999 566766666555555555554444444333 3333322222
Q ss_pred hcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccccccCC
Q 001888 133 ETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTD 212 (1000)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~ 212 (1000)
...... ...-..+.+++.++...+|.+||.++++.....-. |+ .+
T Consensus 407 ~l~~~g-------------------------~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~------RL----kk 451 (1140)
T KOG0208|consen 407 VLNLLG-------------------------VPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQS------RL----KK 451 (1140)
T ss_pred hHHHcC-------------------------CCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHH------HH----Hh
Confidence 111010 01123678999999999999999999988776555 66 88
Q ss_pred CcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCCCCc
Q 001888 213 KPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGN 292 (1000)
Q Consensus 213 ~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (1000)
+++.|-+++.+...|+++.+|||||||||++.+.+-.+..-...-... .+.... .+...+.
T Consensus 452 k~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~-~~~~~~--~~~~~~~---------------- 512 (1140)
T KOG0208|consen 452 KGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDG-PELKVV--TEDSLQL---------------- 512 (1140)
T ss_pred cCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEecccccccc-chhhhh--hhhhccc----------------
Confidence 999999999999999999999999999999999998776522110000 000000 0000000
Q ss_pred cccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHcCcEEE
Q 001888 293 IVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFF 372 (1000)
Q Consensus 293 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~ 372 (1000)
+ .++ ..+........+..++|.||+.....+. + .++|.|.-+.+ ..|+.+.
T Consensus 513 ------------~--~~l-----~~~~~~~~~~~~~~a~atCHSL~~v~g~----l---~GDPLdlkmfe---~t~w~~e 563 (1140)
T KOG0208|consen 513 ------------F--YKL-----SLRSSSLPMGNLVAAMATCHSLTLVDGT----L---VGDPLDLKMFE---STGWVYE 563 (1140)
T ss_pred ------------e--eec-----cccccCCchHHHHHHHhhhceeEEeCCe----e---ccCceeeeeee---ccceEEE
Confidence 0 000 0000111234688999999988765322 1 36788766654 4567665
Q ss_pred eecC-----------CeeEEEecC---CCCCccccEEEEEEEeeCCCCCCceEEEEEEcC-CCcEEEEEccchhHhHHHH
Q 001888 373 GSSQ-----------TSISLHELD---PVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNP-ENQLLLLCKGADSVMFERL 437 (1000)
Q Consensus 373 ~~~~-----------~~~~i~~~~---~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~ 437 (1000)
+.+. ..-.++... +.+.+.....+.+++.+||+|..+||||||+++ +++..+|+|||||.|.+.|
T Consensus 564 e~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic 643 (1140)
T KOG0208|consen 564 EADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEIC 643 (1140)
T ss_pred eccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhc
Confidence 4210 011222211 111111133799999999999999999999986 4678999999999999999
Q ss_pred hccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeec
Q 001888 438 SKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVE 517 (1000)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~ 517 (1000)
++. ..++++.+.++.|+.+|+|++++|+|.++.. .|.+.- ...++.+|.||+|+|++.+|
T Consensus 644 ~p~--tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~---~~~~~~---------------~~~Rd~vEs~l~FlGLiVme 703 (1140)
T KOG0208|consen 644 KPE--TVPADYQEVLKEYTHQGFRVIALASKELETS---TLQKAQ---------------KLSRDTVESNLEFLGLIVME 703 (1140)
T ss_pred Ccc--cCCccHHHHHHHHHhCCeEEEEEecCccCcc---hHHHHh---------------hccHhhhhccceeeEEEEee
Confidence 876 5788999999999999999999999999876 232211 12347889999999999999
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhH-----hhhhccHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEA-----LEKQGDKENITKVSL 592 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~ 592 (1000)
++||+.++.+|++|.+|.|+++|+|||+..||+.+|++||++.+...++....+..+... +...+..+......
T Consensus 704 NkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~- 782 (1140)
T KOG0208|consen 704 NKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPK- 782 (1140)
T ss_pred cccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCC-
Confidence 999999999999999999999999999999999999999999998887776555222110 00000000000000
Q ss_pred HHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEE
Q 001888 593 ESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTL 672 (1000)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vl 672 (1000)
+.. . .........+......+.+.++|+.++.+. .+..+.+.++..++. |||||+|.||.++|+.+|+.|+.|+
T Consensus 783 ~~~-~--~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~-~~~~~l~~~Il~~~~--VfARMsP~qK~~Lie~lQkl~y~Vg 856 (1140)
T KOG0208|consen 783 EPD-P--DLASVKLSLDVLSEKDYHLAMSGKTFQVIL-EHFPELVPKILLKGT--VFARMSPDQKAELIEALQKLGYKVG 856 (1140)
T ss_pred ccC-c--cccCCccChhhhccceeEEEecCchhHHHH-hhcHHHHHHHHhcCe--EEeecCchhHHHHHHHHHhcCcEEE
Confidence 000 0 000000000112345789999999999988 456666777776665 9999999999999999999999999
Q ss_pred EEcCCccChHHhhhcCccccccCccccchhccCcEEec--chhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 001888 673 AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIA--QFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFW 750 (1000)
Q Consensus 673 aiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~--~f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~ 750 (1000)
|||||+|||+|||+||+||+++.+| |..+|.|+.. +.+....+ +.+||..+...-..++|+..+ .+++|.
T Consensus 857 fCGDGANDCgALKaAdvGISLSeaE---ASvAApFTSk~~~I~cVp~v-IrEGRaALVTSf~~FkYMalY----s~iqFi 928 (1140)
T KOG0208|consen 857 FCGDGANDCGALKAADVGISLSEAE---ASVAAPFTSKTPSISCVPDV-IREGRAALVTSFACFKYMALY----SAIQFI 928 (1140)
T ss_pred ecCCCcchhhhhhhcccCcchhhhh---HhhcCccccCCCchhhHhHH-HhhhhhhhhhhHHHHHHHHHH----HHHHHH
Confidence 9999999999999999999998888 7889999987 45656666 999999998888888886433 333444
Q ss_pred HHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccccCCccchhhHHHhhHHHHHHHHHH
Q 001888 751 YEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIII 830 (1000)
Q Consensus 751 ~~~~~~fs~~~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (1000)
...+..+- ...+++.|.+..+++....-+++++.++ +..+....+ |...+++.+.+...+++.++..++-
T Consensus 929 sv~~LY~~-~~nl~D~Qfl~iDLlii~pia~~m~~~~--a~~~L~~~r-------P~~~L~s~~~~~~l~~q~vli~l~q 998 (1140)
T KOG0208|consen 929 SVVFLYLI-NSNLGDLQFLFIDLLIITPIAVMMSRFD--ASDKLFPKR-------PPTNLLSKKILVPLLLQIVLICLVQ 998 (1140)
T ss_pred hhheeeee-cccccchhhhhhHHHHHHHHHHHHccCc--HHHHhcCCC-------CCccccccchhhhhHHHHHHHHHHH
Confidence 33333222 2458899999999998877777776654 333333333 3467888888888887777777777
Q ss_pred HHHHHhh
Q 001888 831 FFFTTNS 837 (1000)
Q Consensus 831 ~~~~~~~ 837 (1000)
+..++..
T Consensus 999 ~i~~l~~ 1005 (1140)
T KOG0208|consen 999 WILTLIV 1005 (1140)
T ss_pred Hhhheee
Confidence 7666544
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-59 Score=548.49 Aligned_cols=427 Identities=18% Similarity=0.224 Sum_probs=337.0
Q ss_pred CCccccCCCC-----CeEEeceeecCCCeEEEEEEEecchhhH---hhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Q 001888 53 EGKQYPLSPQ-----QILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISS 124 (1000)
Q Consensus 53 ~~~~~~l~~~-----n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki---~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~ 124 (1000)
+||+.|+.++ +-+++||.+.+ |++.++|+.||.+|.+ ....+.++.++||+|..+..+...+.++.++ +
T Consensus 156 TGES~PV~K~~g~d~~~V~aGT~v~~-G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii~l~--~ 232 (673)
T PRK14010 156 TGESAPVIKESGGDFDNVIGGTSVAS-DWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIFLV--V 232 (673)
T ss_pred cCCCCceeccCCCccCeeecCceeec-ceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHHHHH--H
Confidence 5899998552 45999999996 9999999999999954 5556667778899998877665444332222 1
Q ss_pred HHHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhccc
Q 001888 125 TGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDR 204 (1000)
Q Consensus 125 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~ 204 (1000)
+.++. .+.... . ....+...+.+++.+|||+|+..++++...++.
T Consensus 233 ~~~~~-~~~~~~--------~--------------------~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~------ 277 (673)
T PRK14010 233 ILTMY-PLAKFL--------N--------------------FNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMD------ 277 (673)
T ss_pred HHHHH-HHHhhc--------c--------------------HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH------
Confidence 11111 010000 0 011455667777788999999988888777766
Q ss_pred ccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCC
Q 001888 205 DMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQT 284 (1000)
Q Consensus 205 ~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (1000)
+| +++++++|+.+++|+||++|+||+|||||||+|++.+.++...+.
T Consensus 278 r~----ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~----------------------------- 324 (673)
T PRK14010 278 RV----TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS----------------------------- 324 (673)
T ss_pred HH----hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC-----------------------------
Confidence 67 899999999999999999999999999999997766655431100
Q ss_pred CCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHH
Q 001888 285 DAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAA 364 (1000)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a 364 (1000)
...++++.+.++|+.. +.||.+.|+++++
T Consensus 325 -------------------------------------~~~~~ll~~a~~~~~~--------------s~~P~~~AIv~~a 353 (673)
T PRK14010 325 -------------------------------------SSFERLVKAAYESSIA--------------DDTPEGRSIVKLA 353 (673)
T ss_pred -------------------------------------ccHHHHHHHHHHhcCC--------------CCChHHHHHHHHH
Confidence 0112455666777532 3599999999999
Q ss_pred HHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhccChhh
Q 001888 365 REVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQF 444 (1000)
Q Consensus 365 ~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~ 444 (1000)
++.|+.... .....+||++++|+|++.++ ++ .+.|||++.++++|...+...
T Consensus 354 ~~~~~~~~~-----------------------~~~~~~pF~~~~k~~gv~~~---g~--~i~kGa~~~il~~~~~~g~~~ 405 (673)
T PRK14010 354 YKQHIDLPQ-----------------------EVGEYIPFTAETRMSGVKFT---TR--EVYKGAPNSMVKRVKEAGGHI 405 (673)
T ss_pred HHcCCCchh-----------------------hhcceeccccccceeEEEEC---CE--EEEECCHHHHHHHhhhcCCCC
Confidence 887653210 01124799999999999764 33 455999999999997643333
Q ss_pred HHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCCc
Q 001888 445 EAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGV 524 (1000)
Q Consensus 445 ~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v 524 (1000)
+.++.+..++++++|+|+++++ .|++++|+++++|++|+++
T Consensus 406 ~~~~~~~~~~~a~~G~~~l~v~---------------------------------------~~~~~lG~i~l~Dp~R~~a 446 (673)
T PRK14010 406 PVDLDALVKGVSKKGGTPLVVL---------------------------------------EDNEILGVIYLKDVIKDGL 446 (673)
T ss_pred chHHHHHHHHHHhCCCeEEEEE---------------------------------------ECCEEEEEEEeecCCcHHH
Confidence 4456677788999999999987 3789999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhh
Q 001888 525 PECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGIS 604 (1000)
Q Consensus 525 ~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 604 (1000)
+++|++||++||+++|+|||+..||.++|+++|+.+
T Consensus 447 ~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~-------------------------------------------- 482 (673)
T PRK14010 447 VERFRELREMGIETVMCTGDNELTAATIAKEAGVDR-------------------------------------------- 482 (673)
T ss_pred HHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce--------------------------------------------
Confidence 999999999999999999999999999999999931
Q ss_pred hhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChHHh
Q 001888 605 QVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGML 684 (1000)
Q Consensus 605 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~ml 684 (1000)
+++|++|+||.++|+.+|+.|+.|+|+|||.||+|+|
T Consensus 483 -------------------------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPAL 519 (673)
T PRK14010 483 -------------------------------------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPAL 519 (673)
T ss_pred -------------------------------------------EEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHH
Confidence 7899999999999999999999999999999999999
Q ss_pred hhcCcccccc-CccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 001888 685 QEADIGVGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFS 758 (1000)
Q Consensus 685 k~AdvGIa~~-g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~fs 758 (1000)
++|||||+|+ |++. |+++||+++.+ |..+..+ +.+||..|.|+++++.|.+..|+...+..+...|...+.
T Consensus 520 a~ADVGIAMgsGTdv--AkeAADiVLldd~ls~Iv~a-v~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~~~~~ 593 (673)
T PRK14010 520 AEANVGLAMNSGTMS--AKEAANLIDLDSNPTKLMEV-VLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMAAMP 593 (673)
T ss_pred HhCCEEEEeCCCCHH--HHHhCCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHHHhcc
Confidence 9999999995 4444 99999999997 6678888 899999999999999999999999888777765554443
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-57 Score=534.50 Aligned_cols=434 Identities=18% Similarity=0.235 Sum_probs=341.3
Q ss_pred EEEEEEE-----CCccccCCCC--C---eEEeceeecCCCeEEEEEEEecchhhH---hhcCCCCCCCccHHHHHHHHHH
Q 001888 46 FVGTLQY-----EGKQYPLSPQ--Q---ILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIV 112 (1000)
Q Consensus 46 F~G~~~~-----~~~~~~l~~~--n---~l~~Gs~l~~tg~~~g~Vv~tG~~Tki---~~n~~~~~~k~s~l~~~~n~~~ 112 (1000)
.+|...+ +||+.|+.++ . .+++||.+.+ |++.+.|+.+|.+|.+ ....+.++.+++|+|+.++.+.
T Consensus 144 ieG~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~-G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~ 222 (679)
T PRK01122 144 IEGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLS-DWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILL 222 (679)
T ss_pred EEccEEEEcccccCCCCceEeCCCCccCeEEeceEEEe-eeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHH
Confidence 3455555 4899998543 3 3999999996 9999999999999954 4455666777899999988877
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHH
Q 001888 113 YLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIV 192 (1000)
Q Consensus 113 ~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~ 192 (1000)
..++++.++++++.+.+ ..|.+. .| .+...+.+++.+|||+|+..++++
T Consensus 223 ~~l~~i~l~~~~~~~~~-~~~~g~--------~~----------------------~l~~~iallV~aiP~alg~l~~~i 271 (679)
T PRK01122 223 AGLTIIFLLVVATLPPF-AAYSGG--------AL----------------------SITVLVALLVCLIPTTIGGLLSAI 271 (679)
T ss_pred HhhhHHHHHHHHHHHHH-HHHhCc--------hH----------------------HHHHHHHHHHHcccchhhhHHHHH
Confidence 76665444433322221 111110 11 566778899999999998877777
Q ss_pred HHHhHHHhhcccccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhc
Q 001888 193 KVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRK 272 (1000)
Q Consensus 193 ~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~ 272 (1000)
...++. +| .++++++|+..++|.||++|+||+|||||||+|+|++.+++..+..
T Consensus 272 ~i~g~~------r~----ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~---------------- 325 (679)
T PRK01122 272 GIAGMD------RV----LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV---------------- 325 (679)
T ss_pred HHHHHH------HH----hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC----------------
Confidence 776665 66 8899999999999999999999999999999999999987532110
Q ss_pred CCcccccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEee
Q 001888 273 GERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEA 352 (1000)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~ 352 (1000)
..++++.+.++|+.. +
T Consensus 326 --------------------------------------------------~~~~ll~~a~~~s~~--------------s 341 (679)
T PRK01122 326 --------------------------------------------------TEEELADAAQLSSLA--------------D 341 (679)
T ss_pred --------------------------------------------------CHHHHHHHHHHhcCC--------------C
Confidence 012355666677533 2
Q ss_pred CChhHHHHHHHHHH-cCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchh
Q 001888 353 ESPDEAAFVIAARE-VGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADS 431 (1000)
Q Consensus 353 ~sp~e~al~~~a~~-~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~ 431 (1000)
.||...||++++++ .++... ...++....+||++.+|+|++.+. | ..|+|||++
T Consensus 342 ~hP~~~AIv~~a~~~~~~~~~--------------------~~~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~e 396 (679)
T PRK01122 342 ETPEGRSIVVLAKQRFNLRER--------------------DLQSLHATFVPFSAQTRMSGVDLD---G--REIRKGAVD 396 (679)
T ss_pred CCchHHHHHHHHHhhcCCCch--------------------hhccccceeEeecCcCceEEEEEC---C--EEEEECCHH
Confidence 58999999999986 343210 122456678899999998888653 3 478999999
Q ss_pred HhHHHHhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceee
Q 001888 432 VMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILL 511 (1000)
Q Consensus 432 ~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~l 511 (1000)
.+++.|...+.+.++++.+.+++++++|+|++++|+ |++++
T Consensus 397 ~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~---------------------------------------~~~~l 437 (679)
T PRK01122 397 AIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAE---------------------------------------DNRVL 437 (679)
T ss_pred HHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEE---------------------------------------CCeEE
Confidence 999999765445567788888999999999999993 67899
Q ss_pred EEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHH
Q 001888 512 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVS 591 (1000)
Q Consensus 512 G~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 591 (1000)
|+++++|++|++++++|++||++||+++|+|||++.||.+||+++|+.+
T Consensus 438 G~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~------------------------------- 486 (679)
T PRK01122 438 GVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------------------------- 486 (679)
T ss_pred EEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-------------------------------
Confidence 9999999999999999999999999999999999999999999999821
Q ss_pred HHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEE
Q 001888 592 LESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTT 671 (1000)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~v 671 (1000)
+++|++|++|.++|+.+|+.|+.|
T Consensus 487 --------------------------------------------------------v~A~~~PedK~~iV~~lQ~~G~~V 510 (679)
T PRK01122 487 --------------------------------------------------------FLAEATPEDKLALIRQEQAEGRLV 510 (679)
T ss_pred --------------------------------------------------------EEccCCHHHHHHHHHHHHHcCCeE
Confidence 789999999999999999999999
Q ss_pred EEEcCCccChHHhhhcCcccccc-CccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHH---H
Q 001888 672 LAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTF---G 745 (1000)
Q Consensus 672 laiGDG~ND~~mlk~AdvGIa~~-g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~---~ 745 (1000)
+|+|||.||+|+|++|||||+|+ |++. |+++||+++.+ |..+..+ +.+||...-.-..+..|++.--+.- +
T Consensus 511 aMtGDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~~s~Iv~a-v~~GR~~~~tr~~~~~f~~~n~~~~~~~i 587 (679)
T PRK01122 511 AMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAGNMVDLDSNPTKLIEV-VEIGKQLLMTRGALTTFSIANDVAKYFAI 587 (679)
T ss_pred EEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEEeCCCHHHHHHH-HHHHHHHHhhhHhhhhhhHHHHHHHHHHH
Confidence 99999999999999999999995 3444 99999999997 6668888 8999999966666677777644443 3
Q ss_pred HHHHHHHHHh
Q 001888 746 FTLFWYEAYA 755 (1000)
Q Consensus 746 ~~~~~~~~~~ 755 (1000)
+|.++...+.
T Consensus 588 ~p~~~~~~~~ 597 (679)
T PRK01122 588 IPAMFAATYP 597 (679)
T ss_pred HHHHHHhhCc
Confidence 4444444443
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-55 Score=510.41 Aligned_cols=435 Identities=18% Similarity=0.219 Sum_probs=340.0
Q ss_pred EEEEEEE-----CCccccCCCC--C---eEEeceeecCCCeEEEEEEEecchhh---HhhcCCCCCCCccHHHHHHHHHH
Q 001888 46 FVGTLQY-----EGKQYPLSPQ--Q---ILLRDSKLKNTDYVYGVVVFTGHDTK---VMQNATDPPSKRSKIERKMDKIV 112 (1000)
Q Consensus 46 F~G~~~~-----~~~~~~l~~~--n---~l~~Gs~l~~tg~~~g~Vv~tG~~Tk---i~~n~~~~~~k~s~l~~~~n~~~ 112 (1000)
.+|.+.+ +||+.|+.++ . .+++||.+.+ |++.+.|+.+|.+|. +....+.++.+++|+|..++.+.
T Consensus 145 ieG~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~-G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~ 223 (675)
T TIGR01497 145 IEGVASVDESAITGESAPVIKESGGDFASVTGGTRILS-DWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILL 223 (675)
T ss_pred EEccEEEEcccccCCCCceeecCCCCcceeecCcEEEe-eEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHH
Confidence 3565555 4899998553 2 3999999996 999999999999994 45555667777899999988877
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHH
Q 001888 113 YLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIV 192 (1000)
Q Consensus 113 ~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~ 192 (1000)
..+.++.++++++.+. +..|.+. ...+...+.+++.+|||+|......+
T Consensus 224 ~~l~~v~li~~~~~~~-~~~~~~~------------------------------~~~~~~lvallV~aiP~aLg~l~~av 272 (675)
T TIGR01497 224 IALTLVFLLVTATLWP-FAAYGGN------------------------------AISVTVLVALLVCLIPTTIGGLLSAI 272 (675)
T ss_pred HHHHHHHHHHHHHHHH-HHHhcCh------------------------------hHHHHHHHHHHHHhCchhhhhHHHHH
Confidence 6655443333322111 1111100 01355568889999999876655555
Q ss_pred HHHhHHHhhcccccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhc
Q 001888 193 KVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRK 272 (1000)
Q Consensus 193 ~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~ 272 (1000)
...++. +| .++++++|+..++|.||++|+||||||||||+|+|++.+++..+..
T Consensus 273 ~iag~~------r~----ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~---------------- 326 (675)
T TIGR01497 273 GIAGMD------RV----LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV---------------- 326 (675)
T ss_pred HHHHHH------HH----HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC----------------
Confidence 555444 66 8899999999999999999999999999999999999987632100
Q ss_pred CCcccccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEee
Q 001888 273 GERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEA 352 (1000)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~ 352 (1000)
..++++...++|+.. +
T Consensus 327 --------------------------------------------------~~~~ll~~aa~~~~~--------------s 342 (675)
T TIGR01497 327 --------------------------------------------------DEKTLADAAQLASLA--------------D 342 (675)
T ss_pred --------------------------------------------------cHHHHHHHHHHhcCC--------------C
Confidence 012455666677532 3
Q ss_pred CChhHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhH
Q 001888 353 ESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSV 432 (1000)
Q Consensus 353 ~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~ 432 (1000)
.||.+.|++++|++.|.... ...++.....||++.+|+|++.+. +| ..++||+++.
T Consensus 343 ~hP~a~Aiv~~a~~~~~~~~--------------------~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~ 398 (675)
T TIGR01497 343 DTPEGKSIVILAKQLGIRED--------------------DVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDA 398 (675)
T ss_pred CCcHHHHHHHHHHHcCCCcc--------------------ccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHH
Confidence 68999999999998765321 112344567899999888877654 34 4789999999
Q ss_pred hHHHHhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeE
Q 001888 433 MFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLG 512 (1000)
Q Consensus 433 i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG 512 (1000)
+++.|...+...+.++.+.+++++++|+|++++|+ |.+++|
T Consensus 399 i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~---------------------------------------~~~~lG 439 (675)
T TIGR01497 399 IKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCE---------------------------------------DNRIYG 439 (675)
T ss_pred HHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEE---------------------------------------CCEEEE
Confidence 99988655444556778888999999999999994 568999
Q ss_pred EeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHH
Q 001888 513 ATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSL 592 (1000)
Q Consensus 513 ~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 592 (1000)
+++++|++||+++++|++|+++||+++|+|||+..+|..+|+++|+.+
T Consensus 440 ~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~-------------------------------- 487 (675)
T TIGR01497 440 VIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD-------------------------------- 487 (675)
T ss_pred EEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE--------------------------------
Confidence 999999999999999999999999999999999999999999999821
Q ss_pred HHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEE
Q 001888 593 ESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTL 672 (1000)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vl 672 (1000)
+++|++|++|..+|+.+|+.|+.|+
T Consensus 488 -------------------------------------------------------v~a~~~PedK~~~v~~lq~~g~~Va 512 (675)
T TIGR01497 488 -------------------------------------------------------FIAEATPEDKIALIRQEQAEGKLVA 512 (675)
T ss_pred -------------------------------------------------------EEcCCCHHHHHHHHHHHHHcCCeEE
Confidence 7789999999999999998999999
Q ss_pred EEcCCccChHHhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 001888 673 AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFW 750 (1000)
Q Consensus 673 aiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~ 750 (1000)
|+|||.||+|||++||+||+|++.. ..++++||+++.+ |..+..+ +.+||+.+.....+..|++...+.-.+..+-
T Consensus 513 mvGDG~NDapAL~~AdvGiAm~~gt-~~akeaadivLldd~~s~Iv~a-v~~GR~~~~t~~~~~t~~~~~~~~~~~~~~~ 590 (675)
T TIGR01497 513 MTGDGTNDAPALAQADVGVAMNSGT-QAAKEAANMVDLDSDPTKLIEV-VHIGKQLLITRGALTTFSIANDVAKYFAIIP 590 (675)
T ss_pred EECCCcchHHHHHhCCEeEEeCCCC-HHHHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHheeeecccHHHHHHHHH
Confidence 9999999999999999999996432 2389999999997 6668888 8999999999999999998877776555444
Q ss_pred HHHH
Q 001888 751 YEAY 754 (1000)
Q Consensus 751 ~~~~ 754 (1000)
..|.
T Consensus 591 ~~~~ 594 (675)
T TIGR01497 591 AIFA 594 (675)
T ss_pred HHHH
Confidence 4333
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-51 Score=456.43 Aligned_cols=476 Identities=22% Similarity=0.305 Sum_probs=325.9
Q ss_pred CCCeEEeceeecC------------CCeEEEEEEEecchhh---HhhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 001888 61 PQQILLRDSKLKN------------TDYVYGVVVFTGHDTK---VMQNATDPPSKRSKIERKMDKIVYLLFSTLILISST 125 (1000)
Q Consensus 61 ~~n~l~~Gs~l~~------------tg~~~g~Vv~tG~~Tk---i~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i 125 (1000)
+..++|.||++.+ -|-+.+.|++||-+|. +++-.--...+-| .-|+-..+++.++++++++
T Consensus 334 k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervT----aNn~Etf~FILFLlVFAia 409 (1160)
T KOG0209|consen 334 KLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVT----ANNRETFIFILFLLVFAIA 409 (1160)
T ss_pred ceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeee----eccHHHHHHHHHHHHHHHH
Confidence 3478899999864 2568999999999993 3221111111111 1122223333344444544
Q ss_pred HHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccc
Q 001888 126 GSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRD 205 (1000)
Q Consensus 126 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~ 205 (1000)
++ ++.|.....+. . -+-...|+-...++.+.||.-||+-++++-- +..+ .
T Consensus 410 Aa--~Yvwv~Gskd~-------------------~---RsrYKL~LeC~LIlTSVvPpELPmELSmAVN--sSL~----A 459 (1160)
T KOG0209|consen 410 AA--GYVWVEGSKDP-------------------T---RSRYKLFLECTLILTSVVPPELPMELSMAVN--SSLI----A 459 (1160)
T ss_pred hh--heEEEecccCc-------------------c---hhhhheeeeeeEEEeccCCCCCchhhhHHHH--HHHH----H
Confidence 43 23444322110 0 0112245566778889999999997766543 3332 3
Q ss_pred cccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCC
Q 001888 206 MYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTD 285 (1000)
Q Consensus 206 m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (1000)
+ ++.++.|..+-.+.=.|+||+-|||||||||+..|.|..+.-....-+..
T Consensus 460 L----ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~------------------------- 510 (1160)
T KOG0209|consen 460 L----AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGAL------------------------- 510 (1160)
T ss_pred H----HHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccc-------------------------
Confidence 3 77899999999999999999999999999999999998763211100000
Q ss_pred CCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHH
Q 001888 286 APGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAR 365 (1000)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~ 365 (1000)
.+-++.-.+-+.++|.||+...-.++ .-|+|.|+|.+++
T Consensus 511 --------------------------------~~~s~~p~~t~~vlAscHsLv~le~~-------lVGDPlEKA~l~~-- 549 (1160)
T KOG0209|consen 511 --------------------------------TPASKAPNETVLVLASCHSLVLLEDK-------LVGDPLEKATLEA-- 549 (1160)
T ss_pred --------------------------------cchhhCCchHHHHHHHHHHHHHhcCc-------ccCChHHHHHHHh--
Confidence 00001112346889999999764332 2489999999875
Q ss_pred HcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCC----CcEEEEEccchhHhHHHHhccC
Q 001888 366 EVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPE----NQLLLLCKGADSVMFERLSKHG 441 (1000)
Q Consensus 366 ~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~----~~~~l~~KGa~~~i~~~~~~~~ 441 (1000)
.|+.+...+. .. +..+.....+|.+.+.|+|.-|||||++.... .++++.+|||||+|.+++.
T Consensus 550 -v~W~~~k~~~--v~-------p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~--- 616 (1160)
T KOG0209|consen 550 -VGWNLEKKNS--VC-------PREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLR--- 616 (1160)
T ss_pred -cCcccccCcc--cC-------CCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHH---
Confidence 5666543211 11 11111346788999999999999999998642 3689999999999999887
Q ss_pred hhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeeccccc
Q 001888 442 QQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQ 521 (1000)
Q Consensus 442 ~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr 521 (1000)
+.+.++.+...+|+++|.|||++|||.+.+--.+ +.| +.-++.+|+||+|.|.+.|.-|+|
T Consensus 617 -dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~--------------q~r----d~~Re~vEsdLtFaGFlif~CPlK 677 (1160)
T KOG0209|consen 617 -DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVS--------------QVR----DLKREDVESDLTFAGFLIFSCPLK 677 (1160)
T ss_pred -hCchhHHHHHHHHhhccceEEEEecccccccchh--------------hhh----hhhhhhhhhcceeeeeEEEeCCCC
Confidence 4567788888999999999999999998742111 011 123478899999999999999999
Q ss_pred CCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHh
Q 001888 522 KGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIRE 601 (1000)
Q Consensus 522 ~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (1000)
++++++|+.|++++++++|+|||++.||.++|+++|++.+...++.+...+.. ..+......+.+.
T Consensus 678 ~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~-~~~~w~s~d~t~~------------- 743 (1160)
T KOG0209|consen 678 PDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDG-NQLEWVSVDGTIV------------- 743 (1160)
T ss_pred ccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCC-ceeeEecCCCcee-------------
Confidence 99999999999999999999999999999999999999876655554443211 1111100000000
Q ss_pred hhhhhcccc---cCccceEEEEeccchHHHhhHH-HHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCC
Q 001888 602 GISQVNSAK---ESKVTFGLVIDGKSLDFALDKK-LEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 677 (1000)
Q Consensus 602 ~~~~~~~~~---~~~~~~~lvi~g~~l~~~~~~~-~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG 677 (1000)
-.++... .-...+.+.++|..++.+...+ +...+. ..-||+|++|.||..++..+++.|+.++|||||
T Consensus 744 --lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~------hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDG 815 (1160)
T KOG0209|consen 744 --LPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIP------HVWVFARVAPKQKEFIITTLKKLGYVTLMCGDG 815 (1160)
T ss_pred --ecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhh------heeEEEeeChhhHHHHHHHHHhcCeEEEEecCC
Confidence 0000000 0123456789999999887654 233232 234999999999999999999999999999999
Q ss_pred ccChHHhhhcCcccccc
Q 001888 678 ANDVGMLQEADIGVGIS 694 (1000)
Q Consensus 678 ~ND~~mlk~AdvGIa~~ 694 (1000)
.||++|||+||||||+-
T Consensus 816 TNDVGALK~AhVGVALL 832 (1160)
T KOG0209|consen 816 TNDVGALKQAHVGVALL 832 (1160)
T ss_pred Ccchhhhhhcccceehh
Confidence 99999999999999873
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-50 Score=478.34 Aligned_cols=395 Identities=31% Similarity=0.427 Sum_probs=326.2
Q ss_pred EEECCccccCCCC--CeEEeceeecCCCeEEEEEEEecchhhH---hhcCCCCCCCccHHHHHHHHHH-HHHHHHHHHHH
Q 001888 50 LQYEGKQYPLSPQ--QILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIV-YLLFSTLILIS 123 (1000)
Q Consensus 50 ~~~~~~~~~l~~~--n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki---~~n~~~~~~k~s~l~~~~n~~~-~~~~~i~~~~~ 123 (1000)
..++||+.|+.+. +.+++|+.+.+ |.+.+.|+.+|.+|.. ..........++++++..+++. .+++++.++++
T Consensus 82 s~LTGEs~pv~k~~g~~v~~gs~~~~-G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 82 SNLTGESVPVLKTAGDAVFAGTYVFN-GTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred ccccCCCCCeeeccCCccccCcEEec-cEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 3346898888654 89999999996 9999999999999843 3333334444688999999998 67777777777
Q ss_pred HHHHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcc
Q 001888 124 STGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHD 203 (1000)
Q Consensus 124 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d 203 (1000)
++.++++..+.... . .+...+.+++.+++.+|||+|+++++++...+..
T Consensus 161 ~~~~~~~~~~~~~~------~--------------------~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~----- 209 (499)
T TIGR01494 161 LAVFLFWAIGLWDP------N--------------------SIFKIFLRALILLVIAIPIALPLAVTIALAVGDA----- 209 (499)
T ss_pred HHHHHHHHHHHccc------c--------------------cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH-----
Confidence 76665543321100 0 1234788999999999999999999999998866
Q ss_pred cccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCC
Q 001888 204 RDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ 283 (1000)
Q Consensus 204 ~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (1000)
+| +++|+++|+++.+|+||+++++|||||||||+|+|+|+++++.+.
T Consensus 210 -~~----~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~---------------------------- 256 (499)
T TIGR01494 210 -RL----AKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG---------------------------- 256 (499)
T ss_pred -HH----HHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC----------------------------
Confidence 66 778999999999999999999999999999999999999864321
Q ss_pred CCCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHH
Q 001888 284 TDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIA 363 (1000)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~ 363 (1000)
++.++||.|.|++++
T Consensus 257 -----------------------------------------------------------------~~~s~hp~~~ai~~~ 271 (499)
T TIGR01494 257 -----------------------------------------------------------------EYLSGHPDERALVKS 271 (499)
T ss_pred -----------------------------------------------------------------CcCCCChHHHHHHHH
Confidence 012479999999998
Q ss_pred HHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhccChh
Q 001888 364 AREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQ 443 (1000)
Q Consensus 364 a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~ 443 (1000)
++..+ +...||++.+++|+++++.+++ .|+||+++.+.+.|..
T Consensus 272 ~~~~~------------------------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~---- 314 (499)
T TIGR01494 272 AKWKI------------------------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD---- 314 (499)
T ss_pred hhhcC------------------------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH----
Confidence 86411 1357999999999999986433 4789999999988742
Q ss_pred hHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCC
Q 001888 444 FEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKG 523 (1000)
Q Consensus 444 ~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~ 523 (1000)
+.+.++.++.+|+|++++|++ -+++|+++++|++|++
T Consensus 315 ----~~~~~~~~~~~g~~~~~~a~~---------------------------------------~~~~g~i~l~d~lr~~ 351 (499)
T TIGR01494 315 ----LEEKVKELAQSGLRVLAVASK---------------------------------------ETLLGLLGLEDPLRDD 351 (499)
T ss_pred ----HHHHHHHHHhCCCEEEEEEEC---------------------------------------CeEEEEEEecCCCchh
Confidence 233455678899999999962 3699999999999999
Q ss_pred cHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhh
Q 001888 524 VPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGI 603 (1000)
Q Consensus 524 v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (1000)
++++|+.|+++|+++||+|||+..+|..+|+++|+
T Consensus 352 ~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi--------------------------------------------- 386 (499)
T TIGR01494 352 AKETISELREAGIRVIMLTGDNVLTAKAIAKELGI--------------------------------------------- 386 (499)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------------------
Confidence 99999999999999999999999999999999874
Q ss_pred hhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChHH
Q 001888 604 SQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGM 683 (1000)
Q Consensus 604 ~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~m 683 (1000)
+++++|++|.++|+.++..|+.|+|+|||.||++|
T Consensus 387 ---------------------------------------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~a 421 (499)
T TIGR01494 387 ---------------------------------------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPA 421 (499)
T ss_pred ---------------------------------------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHH
Confidence 25678999999999999889999999999999999
Q ss_pred hhhcCccccccCccccchhccCcEEecch--hhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 001888 684 LQEADIGVGISGVEGMQAVMSSDYAIAQF--RFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWY 751 (1000)
Q Consensus 684 lk~AdvGIa~~g~e~~~ak~~aD~vl~~f--~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~ 751 (1000)
+++|||||+|. ++.+||+++.++ ..+..+ +.+||..++++++.+.|.+++|+..+.+.+++
T Consensus 422 l~~Advgia~~------a~~~adivl~~~~l~~i~~~-~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~ 484 (499)
T TIGR01494 422 LKKADVGIAMG------AKAAADIVLLDDNLSTIVDA-LKEGRKTFSTIKSNIFWAIAYNLILIPLAALL 484 (499)
T ss_pred HHhCCCccccc------hHHhCCeEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999994 578899999974 345555 89999999999999999999999977766653
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-51 Score=450.08 Aligned_cols=464 Identities=20% Similarity=0.260 Sum_probs=351.8
Q ss_pred ECCccccCCC--CCeEEeceeecCCCeEEEEEEEecchh---hHhhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 001888 52 YEGKQYPLSP--QQILLRDSKLKNTDYVYGVVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTG 126 (1000)
Q Consensus 52 ~~~~~~~l~~--~n~l~~Gs~l~~tg~~~g~Vv~tG~~T---ki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~ 126 (1000)
++||+.|+++ ++-+|+||++++ |.+.++|++||.+| |....... .....++++.++.+..++++.+.+ .+++
T Consensus 185 lTGESLpvtKh~gd~vfSgSTcKq-GE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ci~si~~-g~li 261 (942)
T KOG0205|consen 185 LTGESLPVTKHPGDEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNFCICSIAL-GMLI 261 (942)
T ss_pred hcCCccccccCCCCceeccccccc-ceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhHHHHHHHH-HHHH
Confidence 4589999966 599999999997 99999999999999 43333333 567789999999998887654332 2222
Q ss_pred HHhhhhhc-ccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccc
Q 001888 127 SVFFGIET-KRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRD 205 (1000)
Q Consensus 127 ~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~ 205 (1000)
-+...++. .+... ....+.++++.--||++||..+++..++++. +
T Consensus 262 e~~vmy~~q~R~~r----------------------------~~i~nLlvllIGgiPiamPtVlsvTMAiGs~------r 307 (942)
T KOG0205|consen 262 EITVMYPIQHRLYR----------------------------DGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH------R 307 (942)
T ss_pred HHHhhhhhhhhhhh----------------------------hhhhheheeeecccccccceeeeehhhHHHH------H
Confidence 22222222 11110 0223345556666999999999999999998 5
Q ss_pred cccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEE----EEEcCeeeccchhHHHHHHHhhcCCcccccCC
Q 001888 206 MYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVK----CSVAGVAYGRVMTEVERTLAKRKGERTFEVDD 281 (1000)
Q Consensus 206 m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~----~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 281 (1000)
+ +++++++++.+++|+|+.+|++|||||||||.|++++.+ ++..|..
T Consensus 308 L----aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~------------------------- 358 (942)
T KOG0205|consen 308 L----SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVD------------------------- 358 (942)
T ss_pred H----HhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCC-------------------------
Confidence 5 889999999999999999999999999999999999876 2222210
Q ss_pred CCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHH
Q 001888 282 SQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFV 361 (1000)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~ 361 (1000)
-.++++..++.. .. .+.+..|.|++
T Consensus 359 ------------------------------------------~D~~~L~A~rAs--r~-----------en~DAID~A~v 383 (942)
T KOG0205|consen 359 ------------------------------------------KDDVLLTAARAS--RK-----------ENQDAIDAAIV 383 (942)
T ss_pred ------------------------------------------hHHHHHHHHHHh--hh-----------cChhhHHHHHH
Confidence 012223333332 11 13688999999
Q ss_pred HHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhccC
Q 001888 362 IAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHG 441 (1000)
Q Consensus 362 ~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~ 441 (1000)
...+.- +..+..|+.++.+||++..||....+.+++|+.+-.+||||+.|++.|+...
T Consensus 384 ~~L~dP----------------------Keara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~ 441 (942)
T KOG0205|consen 384 GMLADP----------------------KEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDH 441 (942)
T ss_pred HhhcCH----------------------HHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccC
Confidence 875431 1126789999999999999999999999999999999999999999998754
Q ss_pred hhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeeccccc
Q 001888 442 QQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQ 521 (1000)
Q Consensus 442 ~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr 521 (1000)
+.+++..+.+++|+++|+|.|++|++..++..- +.-....+++|+.-+-||+|
T Consensus 442 -~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~--------------------------~~~g~pw~~~gllp~fdppr 494 (942)
T KOG0205|consen 442 -DIPERVHSIIDKFAERGLRSLAVARQEVPEKTK--------------------------ESPGGPWEFVGLLPLFDPPR 494 (942)
T ss_pred -cchHHHHHHHHHHHHhcchhhhhhhhccccccc--------------------------cCCCCCcccccccccCCCCc
Confidence 688999999999999999999999998877420 11235689999999999999
Q ss_pred CCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHh
Q 001888 522 KGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIRE 601 (1000)
Q Consensus 522 ~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (1000)
.+..++|++..+.|..|.|+|||...-++..++.+|+-.+-.+.-..-+.+ +++
T Consensus 495 hdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~-------~~~------------------- 548 (942)
T KOG0205|consen 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLG-------KDG------------------- 548 (942)
T ss_pred cchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCC-------CCC-------------------
Confidence 999999999999999999999999999999999999854321100000000 000
Q ss_pred hhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccCh
Q 001888 602 GISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDV 681 (1000)
Q Consensus 602 ~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~ 681 (1000)
.+.|.+.+...+ +.--|+.+.|++|..+|+.+|..|+.|+|+|||+||+
T Consensus 549 -----------------~~~~~~v~elie--------------~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvnda 597 (942)
T KOG0205|consen 549 -----------------SMPGSPVDELIE--------------KADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDA 597 (942)
T ss_pred -----------------CCCCCcHHHHhh--------------hccCccccCHHHHHHHHHHHhhcCceecccCCCcccc
Confidence 011111111111 2236788889999999999999999999999999999
Q ss_pred HHhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHH
Q 001888 682 GMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTF 744 (1000)
Q Consensus 682 ~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~ 744 (1000)
|++|.||+||++.+..+. |..+||+|++. .+-+..+ +..+|.+|+|++.+..|.+.-.+-+
T Consensus 598 paLKkAdigiava~atda-ar~asdiVltepglSviI~a-vltSraIfqrmknytiyavsitiri 660 (942)
T KOG0205|consen 598 PALKKADIGIAVADATDA-ARSASDIVLTEPGLSVIISA-VLTSRAIFQRMKNYTIYAVSITIRI 660 (942)
T ss_pred hhhcccccceeeccchhh-hcccccEEEcCCCchhhHHH-HHHHHHHHHHHhhheeeeehhHHHH
Confidence 999999999999776664 78899999998 5556667 7899999999999888876654443
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-48 Score=455.72 Aligned_cols=433 Identities=21% Similarity=0.261 Sum_probs=338.1
Q ss_pred eEEEecCCCCCcc----eEEEEEEE-----CCccccCC--CCCeEEeceeecCCCeEEEEEEEecchhh---HhhcCCCC
Q 001888 32 AVIKCEDPNERLY----SFVGTLQY-----EGKQYPLS--PQQILLRDSKLKNTDYVYGVVVFTGHDTK---VMQNATDP 97 (1000)
Q Consensus 32 g~i~~e~p~~~l~----~F~G~~~~-----~~~~~~l~--~~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tk---i~~n~~~~ 97 (1000)
|.+-.-+|.+.+- --+|...+ +||+.|+. .++-++.||.+.+ |.+...|+.+|.||. |....+++
T Consensus 233 GD~v~VrpGE~IPvDG~V~~G~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~-G~l~i~vt~~~~dt~la~Ii~LVe~A 311 (713)
T COG2217 233 GDIVLVRPGERIPVDGVVVSGSSSVDESMLTGESLPVEKKPGDEVFAGTVNLD-GSLTIRVTRVGADTTLARIIRLVEEA 311 (713)
T ss_pred CCEEEECCCCEecCCeEEEeCcEEeecchhhCCCCCEecCCCCEEeeeEEECC-ccEEEEEEecCccCHHHHHHHHHHHH
Confidence 3444445544442 23454444 48988884 4699999999996 999999999999994 46666778
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHh
Q 001888 98 PSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLY 177 (1000)
Q Consensus 98 ~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 177 (1000)
+.+++|+|+..+++..++.++.++++++.+++|.++... +| -..+.+++.++
T Consensus 312 q~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~--------~~--------------------~~a~~~a~avL 363 (713)
T COG2217 312 QSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGG--------DW--------------------ETALYRALAVL 363 (713)
T ss_pred hhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC--------cH--------------------HHHHHHHHhhe
Confidence 889999999999999999999999888887765544321 12 22688999999
Q ss_pred hccccceehhhHHHHHHHhHHHhhcccccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeee
Q 001888 178 GYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAY 257 (1000)
Q Consensus 178 ~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y 257 (1000)
+..|||+|.++.+++.+.+.... +++|+++|+.+.+|.|+++|+|+||||||||+|+|.+.++...+.
T Consensus 364 VIaCPCALgLAtP~ai~~g~g~a----------A~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~-- 431 (713)
T COG2217 364 VIACPCALGLATPTAILVGIGRA----------ARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG-- 431 (713)
T ss_pred eeeCccHHHhHHHHHHHHHHHHH----------HhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--
Confidence 99999999999999998887743 889999999999999999999999999999999999998864332
Q ss_pred ccchhHHHHHHHhhcCCcccccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcce
Q 001888 258 GRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTA 337 (1000)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~ 337 (1000)
+. .+++...+ +
T Consensus 432 --~e---------------------------------------------------------------~~~L~laA-a--- 442 (713)
T COG2217 432 --DE---------------------------------------------------------------DELLALAA-A--- 442 (713)
T ss_pred --CH---------------------------------------------------------------HHHHHHHH-H---
Confidence 00 01111111 1
Q ss_pred eeccCCCCCceEEeeCChhHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEc
Q 001888 338 IPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRN 417 (1000)
Q Consensus 338 ~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~ 417 (1000)
.+..++||..+|++++|+..|..-. ..++ .+| .+...-.+
T Consensus 443 ----------lE~~S~HPiA~AIv~~a~~~~~~~~---------------------~~~~---~i~----G~Gv~~~v-- 482 (713)
T COG2217 443 ----------LEQHSEHPLAKAIVKAAAERGLPDV---------------------EDFE---EIP----GRGVEAEV-- 482 (713)
T ss_pred ----------HHhcCCChHHHHHHHHHHhcCCCCc---------------------ccee---eec----cCcEEEEE--
Confidence 1234689999999999988762111 1111 111 11111111
Q ss_pred CCCcEEEEEccchhHhHHHHhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHH
Q 001888 418 PENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALV 497 (1000)
Q Consensus 418 ~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~ 497 (1000)
+|+ .+.-|.+..+.+.-. .... .....+.+..+|..++.++
T Consensus 483 -~g~--~v~vG~~~~~~~~~~----~~~~-~~~~~~~~~~~G~t~v~va------------------------------- 523 (713)
T COG2217 483 -DGE--RVLVGNARLLGEEGI----DLPL-LSERIEALESEGKTVVFVA------------------------------- 523 (713)
T ss_pred -CCE--EEEEcCHHHHhhcCC----Cccc-hhhhHHHHHhcCCeEEEEE-------------------------------
Confidence 332 333488876643211 1111 4566778889999988888
Q ss_pred HHHHHhhhccceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhH
Q 001888 498 ASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEA 577 (1000)
Q Consensus 498 ~~~~~~iE~~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~ 577 (1000)
.|.+++|+++++|++|++++++|++||+.||++.|+|||+..+|..+|+++||.+
T Consensus 524 --------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~----------------- 578 (713)
T COG2217 524 --------VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE----------------- 578 (713)
T ss_pred --------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh-----------------
Confidence 3679999999999999999999999999999999999999999999999999821
Q ss_pred hhhhccHHHHHHHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhH
Q 001888 578 LEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQK 657 (1000)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK 657 (1000)
+.+.+.|++|
T Consensus 579 ----------------------------------------------------------------------v~AellPedK 588 (713)
T COG2217 579 ----------------------------------------------------------------------VRAELLPEDK 588 (713)
T ss_pred ----------------------------------------------------------------------heccCCcHHH
Confidence 7788999999
Q ss_pred HHHHHHHhcCCCEEEEEcCCccChHHhhhcCcccccc-CccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHH
Q 001888 658 ALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMI 734 (1000)
Q Consensus 658 ~~iV~~l~~~~~~vlaiGDG~ND~~mlk~AdvGIa~~-g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i 734 (1000)
.++|+.+|..|+.|+|+|||.||+|+|..|||||+|+ |++. |+++||+++++ .+.+..+ +..+|..++++++.+
T Consensus 589 ~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDv--A~eaADvvL~~~dL~~v~~a-i~lsr~t~~~IkqNl 665 (713)
T COG2217 589 AEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDV--AIEAADVVLMRDDLSAVPEA-IDLSRATRRIIKQNL 665 (713)
T ss_pred HHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHH--HHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999995 4555 99999999997 5567777 899999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 001888 735 CYFFYKNLTFGFTLFWY 751 (1000)
Q Consensus 735 ~~~~~~n~~~~~~~~~~ 751 (1000)
.|.|.+|.+++.+..+.
T Consensus 666 ~~A~~yn~~~iplA~~g 682 (713)
T COG2217 666 FWAFGYNAIAIPLAAGG 682 (713)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999998886666554
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-46 Score=450.44 Aligned_cols=414 Identities=19% Similarity=0.214 Sum_probs=321.2
Q ss_pred EEEEEEE-----CCccccCCC--CCeEEeceeecCCCeEEEEEEEecchhh---HhhcCCCCCCCccHHHHHHHHHHHHH
Q 001888 46 FVGTLQY-----EGKQYPLSP--QQILLRDSKLKNTDYVYGVVVFTGHDTK---VMQNATDPPSKRSKIERKMDKIVYLL 115 (1000)
Q Consensus 46 F~G~~~~-----~~~~~~l~~--~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tk---i~~n~~~~~~k~s~l~~~~n~~~~~~ 115 (1000)
.+|...+ +||+.|+.+ ++.+++||.+.+ |.+.+.|+.+|.+|. +.+..+++..+++|+|+.++++..++
T Consensus 282 i~g~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~-G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~ 360 (741)
T PRK11033 282 LSPFASFDESALTGESIPVERATGEKVPAGATSVD-RLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIY 360 (741)
T ss_pred EECcEEeecccccCCCCCEecCCCCeeccCCEEcC-ceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHH
Confidence 3454444 589999855 599999999996 999999999999994 45555667778899999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHH
Q 001888 116 FSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVL 195 (1000)
Q Consensus 116 ~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~ 195 (1000)
.+++++++++.++++.++... +| -..+.+++.+++..|||+|.++.+++...
T Consensus 361 ~~~v~~~a~~~~~~~~~~~~~--------~~--------------------~~~i~~a~svlviacPcaL~latP~a~~~ 412 (741)
T PRK11033 361 TPAIMLVALLVILVPPLLFAA--------PW--------------------QEWIYRGLTLLLIGCPCALVISTPAAITS 412 (741)
T ss_pred HHHHHHHHHHHHHHHHHHccC--------CH--------------------HHHHHHHHHHHHHhchhhhhhhhHHHHHH
Confidence 999999999888775433211 12 11466788999999999998877777666
Q ss_pred hHHHhhcccccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCc
Q 001888 196 QSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGER 275 (1000)
Q Consensus 196 ~~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~ 275 (1000)
+... . +++|+++|+.+.+|.|+++++||||||||||+|+|++.++...+.. .
T Consensus 413 ~l~~------a----ar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~---~--------------- 464 (741)
T PRK11033 413 GLAA------A----ARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI---S--------------- 464 (741)
T ss_pred HHHH------H----HHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC---C---------------
Confidence 5553 2 7789999999999999999999999999999999999987543210 0
Q ss_pred ccccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCCh
Q 001888 276 TFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESP 355 (1000)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp 355 (1000)
. .+++...+. + + ..+.||
T Consensus 465 ---------------------------------------------~---~~~l~~aa~---~--e---------~~s~hP 482 (741)
T PRK11033 465 ---------------------------------------------E---SELLALAAA---V--E---------QGSTHP 482 (741)
T ss_pred ---------------------------------------------H---HHHHHHHHH---H--h---------cCCCCH
Confidence 0 112222211 1 1 125799
Q ss_pred hHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEE-EEEE-cCCCcEEEEEccchhHh
Q 001888 356 DEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMS-VMVR-NPENQLLLLCKGADSVM 433 (1000)
Q Consensus 356 ~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrms-viv~-~~~~~~~l~~KGa~~~i 433 (1000)
.+.||++++++.|.. +||.++++.+. .-++ .-+|+.+. -|+++.+
T Consensus 483 ia~Ai~~~a~~~~~~-------------------------------~~~~~~~~~~~g~Gv~~~~~g~~~~--ig~~~~~ 529 (741)
T PRK11033 483 LAQAIVREAQVRGLA-------------------------------IPEAESQRALAGSGIEGQVNGERVL--ICAPGKL 529 (741)
T ss_pred HHHHHHHHHHhcCCC-------------------------------CCCCcceEEEeeEEEEEEECCEEEE--Eecchhh
Confidence 999999999875532 34555555442 1122 11343322 3888776
Q ss_pred HHHHhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEE
Q 001888 434 FERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGA 513 (1000)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~ 513 (1000)
.+ ..+++...++.+..+|+|++++|+ |.+++|+
T Consensus 530 ~~--------~~~~~~~~~~~~~~~g~~~v~va~---------------------------------------~~~~~g~ 562 (741)
T PRK11033 530 PP--------LADAFAGQINELESAGKTVVLVLR---------------------------------------NDDVLGL 562 (741)
T ss_pred hh--------ccHHHHHHHHHHHhCCCEEEEEEE---------------------------------------CCEEEEE
Confidence 43 123445566788999999999994 6789999
Q ss_pred eeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHH
Q 001888 514 TAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLE 593 (1000)
Q Consensus 514 i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (1000)
++++|++|++++++|+.|++.|++++|+|||+..+|..+|+++|+.
T Consensus 563 i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~---------------------------------- 608 (741)
T PRK11033 563 IALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID---------------------------------- 608 (741)
T ss_pred EEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----------------------------------
Confidence 9999999999999999999999999999999999999999999982
Q ss_pred HHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEE
Q 001888 594 SVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLA 673 (1000)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vla 673 (1000)
..++..|++|..+|+.++.. ..|+|
T Consensus 609 ------------------------------------------------------~~~~~~p~~K~~~v~~l~~~-~~v~m 633 (741)
T PRK11033 609 ------------------------------------------------------FRAGLLPEDKVKAVTELNQH-APLAM 633 (741)
T ss_pred ------------------------------------------------------eecCCCHHHHHHHHHHHhcC-CCEEE
Confidence 23456799999999999754 58999
Q ss_pred EcCCccChHHhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 001888 674 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLF 749 (1000)
Q Consensus 674 iGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~ 749 (1000)
+|||.||++||+.|||||+|++.. ..++++||+++.+ +..+..+ +..||..+.++++.+.|.+..|++++.+.+
T Consensus 634 vGDgiNDapAl~~A~vgia~g~~~-~~a~~~adivl~~~~l~~l~~~-i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~ 709 (741)
T PRK11033 634 VGDGINDAPAMKAASIGIAMGSGT-DVALETADAALTHNRLRGLAQM-IELSRATHANIRQNITIALGLKAIFLVTTL 709 (741)
T ss_pred EECCHHhHHHHHhCCeeEEecCCC-HHHHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999996433 3378999999986 5567766 899999999999999999999987655544
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-45 Score=421.12 Aligned_cols=436 Identities=20% Similarity=0.221 Sum_probs=335.6
Q ss_pred eEEEEEEEC-----CccccCCC--CCeEEeceeecCCCeEEEEEEEecchh---hHhhcCCCCCCCccHHHHHHHHHHHH
Q 001888 45 SFVGTLQYE-----GKQYPLSP--QQILLRDSKLKNTDYVYGVVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYL 114 (1000)
Q Consensus 45 ~F~G~~~~~-----~~~~~l~~--~n~l~~Gs~l~~tg~~~g~Vv~tG~~T---ki~~n~~~~~~k~s~l~~~~n~~~~~ 114 (1000)
.-+|...+| ||+.|+.+ +..+.+||+..| |..+.-++.+|.|| +|.+..+.++..+.|+|+.+|+++.+
T Consensus 417 Vv~Gss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~n-G~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~y 495 (951)
T KOG0207|consen 417 VVDGSSEVDESLITGESMPVPKKKGSTVIAGSINLN-GTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGY 495 (951)
T ss_pred EEeCceeechhhccCCceecccCCCCeeeeeeecCC-ceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhc
Confidence 345666664 78888855 599999999998 99999999999999 55666778888899999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHH
Q 001888 115 LFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKV 194 (1000)
Q Consensus 115 ~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~ 194 (1000)
+.+++++++++.+++|.+..... .||- ...+..+...|..++.+++.+|||+|.++.+++.+
T Consensus 496 FvP~Vi~lS~~t~~~w~~~g~~~-------~~~~-----------~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvm 557 (951)
T KOG0207|consen 496 FVPVVIVLSLATFVVWILIGKIV-------FKYP-----------RSFFDAFSHAFQLAISVLVIACPCALGLATPTAVM 557 (951)
T ss_pred CCchhhHHHHHHHHHHHHHcccc-------ccCc-----------chhhHHHHHHHHhhheEEEEECchhhhcCCceEEE
Confidence 99999999999988877654322 1211 11112345678899999999999999998887766
Q ss_pred HhHHHhhcccccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCC
Q 001888 195 LQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGE 274 (1000)
Q Consensus 195 ~~~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~ 274 (1000)
++.-.- +.+|+++|..+.+|.+.+|++|.||||||||+|++.+.++.+.+...
T Consensus 558 vatgvg----------A~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~----------------- 610 (951)
T KOG0207|consen 558 VATGVG----------ATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPI----------------- 610 (951)
T ss_pred EEechh----------hhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcc-----------------
Confidence 654422 77999999999999999999999999999999999999886543210
Q ss_pred cccccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCC
Q 001888 275 RTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAES 354 (1000)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~s 354 (1000)
..++++...+ ..+-.++|
T Consensus 611 ------------------------------------------------~~~e~l~~v~--------------a~Es~SeH 628 (951)
T KOG0207|consen 611 ------------------------------------------------SLKEALALVA--------------AMESGSEH 628 (951)
T ss_pred ------------------------------------------------cHHHHHHHHH--------------HHhcCCcC
Confidence 0112222211 11223589
Q ss_pred hhHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhH
Q 001888 355 PDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMF 434 (1000)
Q Consensus 355 p~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~ 434 (1000)
|...|++++|++.+.. ++...+. ..-.|-.+.....+.+. ..+ ..-|.-+.+.
T Consensus 629 Pig~AIv~yak~~~~~-----~~~~~~~-----------------~~~~~pg~g~~~~~~~~--~~~---i~iGN~~~~~ 681 (951)
T KOG0207|consen 629 PIGKAIVDYAKEKLVE-----PNPEGVL-----------------SFEYFPGEGIYVTVTVD--GNE---VLIGNKEWMS 681 (951)
T ss_pred chHHHHHHHHHhcccc-----cCccccc-----------------eeecccCCCcccceEEe--eeE---EeechHHHHH
Confidence 9999999999987611 1111111 11112222222122221 122 2236554443
Q ss_pred HHHhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEe
Q 001888 435 ERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGAT 514 (1000)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i 514 (1000)
. ......++++..+++-...|..+.+++ -|-++.|++
T Consensus 682 r----~~~~~~~~i~~~~~~~e~~g~tvv~v~---------------------------------------vn~~l~gv~ 718 (951)
T KOG0207|consen 682 R----NGCSIPDDILDALTESERKGQTVVYVA---------------------------------------VNGQLVGVF 718 (951)
T ss_pred h----cCCCCchhHHHhhhhHhhcCceEEEEE---------------------------------------ECCEEEEEE
Confidence 2 222334567788888889999999999 388999999
Q ss_pred eecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHH
Q 001888 515 AVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLES 594 (1000)
Q Consensus 515 ~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (1000)
+++|++|+++..+|..||+.||++.|+|||+..+|.++|+++|+-
T Consensus 719 ~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~----------------------------------- 763 (951)
T KOG0207|consen 719 ALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID----------------------------------- 763 (951)
T ss_pred EeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc-----------------------------------
Confidence 999999999999999999999999999999999999999999951
Q ss_pred HHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEE
Q 001888 595 VTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAI 674 (1000)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlai 674 (1000)
.|+|.+.|+||.+.|+.+|+.++.|+|+
T Consensus 764 ----------------------------------------------------~V~aev~P~~K~~~Ik~lq~~~~~VaMV 791 (951)
T KOG0207|consen 764 ----------------------------------------------------NVYAEVLPEQKAEKIKEIQKNGGPVAMV 791 (951)
T ss_pred ----------------------------------------------------eEEeccCchhhHHHHHHHHhcCCcEEEE
Confidence 2899999999999999999999999999
Q ss_pred cCCccChHHhhhcCcccccc-CccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q 001888 675 GDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTL 748 (1000)
Q Consensus 675 GDG~ND~~mlk~AdvGIa~~-g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~ 748 (1000)
|||.||+|+|.+|||||+|+ |++. |.++||+++++ ...+... +..+|....|++..+.|.+.+|++.+.+.
T Consensus 792 GDGINDaPALA~AdVGIaig~gs~v--AieaADIVLmrn~L~~v~~a-i~LSrkt~~rIk~N~~~A~~yn~~~IpIA 865 (951)
T KOG0207|consen 792 GDGINDAPALAQADVGIAIGAGSDV--AIEAADIVLMRNDLRDVPFA-IDLSRKTVKRIKLNFVWALIYNLVGIPIA 865 (951)
T ss_pred eCCCCccHHHHhhccceeeccccHH--HHhhCCEEEEccchhhhHHH-HHHHHHHHhhHHHHHHHHHHHHHhhhhhh
Confidence 99999999999999999995 4444 99999999997 4445556 88999999999999999999998764443
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-44 Score=429.75 Aligned_cols=422 Identities=19% Similarity=0.211 Sum_probs=324.0
Q ss_pred EEEEEEE-----CCccccC--CCCCeEEeceeecCCCeEEEEEEEecchhhH---hhcCCCCCCCccHHHHHHHHHHHHH
Q 001888 46 FVGTLQY-----EGKQYPL--SPQQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLL 115 (1000)
Q Consensus 46 F~G~~~~-----~~~~~~l--~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki---~~n~~~~~~k~s~l~~~~n~~~~~~ 115 (1000)
.+|...+ +||+.|+ ..++.+|+||.+.+ |.+.++|+.||.+|++ .......+.+++++++.+++++.++
T Consensus 95 i~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~-g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~ 173 (556)
T TIGR01525 95 ISGESEVDESALTGESMPVEKKEGDEVFAGTINGD-GSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYY 173 (556)
T ss_pred EecceEEeehhccCCCCCEecCCcCEEeeceEECC-ceEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHH
Confidence 3455555 4888887 44699999999996 9999999999999965 3334445667899999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHH
Q 001888 116 FSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVL 195 (1000)
Q Consensus 116 ~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~ 195 (1000)
.++.++++++.++++.+.... ..+..++.+++..|||+|+++++++...
T Consensus 174 ~~~~l~~a~~~~~~~~~~~~~-------------------------------~~~~~~~~vlv~~~P~al~l~~~~~~~~ 222 (556)
T TIGR01525 174 VPAVLAIALLTFVVWLALGAL-------------------------------GALYRALAVLVVACPCALGLATPVAILV 222 (556)
T ss_pred HHHHHHHHHHHHHHHHHhccc-------------------------------hHHHHHHHHHhhccccchhehhHHHHHH
Confidence 998888888877665432110 2678899999999999999999999888
Q ss_pred hHHHhhcccccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCc
Q 001888 196 QSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGER 275 (1000)
Q Consensus 196 ~~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~ 275 (1000)
+.. +| .++++++|+++.+|.||++|++|||||||||+|+|++.++...+... .
T Consensus 223 ~~~------~~----~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-~---------------- 275 (556)
T TIGR01525 223 AIG------VA----ARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-I---------------- 275 (556)
T ss_pred HHH------HH----HHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-c----------------
Confidence 877 55 78999999999999999999999999999999999999886543210 0
Q ss_pred ccccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCCh
Q 001888 276 TFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESP 355 (1000)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp 355 (1000)
. ..+++.. |..+. ..+.||
T Consensus 276 --------------------------------------------~---~~~~l~~---a~~~e-----------~~~~hp 294 (556)
T TIGR01525 276 --------------------------------------------S---EEELLAL---AAALE-----------QSSSHP 294 (556)
T ss_pred --------------------------------------------c---HHHHHHH---HHHHh-----------ccCCCh
Confidence 0 0122222 22221 124699
Q ss_pred hHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHH
Q 001888 356 DEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFE 435 (1000)
Q Consensus 356 ~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~ 435 (1000)
.+.|+++++++.|..... .+ -...+ ..+.+...++ |. .-+..|+++.+ +
T Consensus 295 ~~~Ai~~~~~~~~~~~~~---------------------~~-~~~~~----~~~gi~~~~~---g~-~~~~lg~~~~~-~ 343 (556)
T TIGR01525 295 LARAIVRYAKKRGLELPK---------------------QE-DVEEV----PGKGVEATVD---GQ-EEVRIGNPRLL-E 343 (556)
T ss_pred HHHHHHHHHHhcCCCccc---------------------cc-CeeEe----cCCeEEEEEC---Ce-eEEEEecHHHH-h
Confidence 999999999987653211 00 00011 1222333322 21 12334776654 1
Q ss_pred HHhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEee
Q 001888 436 RLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATA 515 (1000)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~ 515 (1000)
.. . ....+....++.++.+|+|+++++ .|.+++|.+.
T Consensus 344 -~~--~-~~~~~~~~~~~~~~~~g~~~~~v~---------------------------------------~~~~~~g~i~ 380 (556)
T TIGR01525 344 -LA--A-EPISASPDLLNEGESQGKTVVFVA---------------------------------------VDGELLGVIA 380 (556)
T ss_pred -hc--C-CCchhhHHHHHHHhhCCcEEEEEE---------------------------------------ECCEEEEEEE
Confidence 11 1 112233456677889999999999 3679999999
Q ss_pred ecccccCCcHHHHHHHHHcC-CeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHH
Q 001888 516 VEDKLQKGVPECIDKLAQAG-IKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLES 594 (1000)
Q Consensus 516 i~D~lr~~v~e~I~~l~~aG-Ikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (1000)
++|+++|+++++|+.|+++| ++++|+|||+..++..+++++|+-.
T Consensus 381 ~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~---------------------------------- 426 (556)
T TIGR01525 381 LRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE---------------------------------- 426 (556)
T ss_pred ecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe----------------------------------
Confidence 99999999999999999999 9999999999999999999999821
Q ss_pred HHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEE
Q 001888 595 VTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAI 674 (1000)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlai 674 (1000)
+|+++.|++|..+++.++..++.|+|+
T Consensus 427 -----------------------------------------------------~f~~~~p~~K~~~v~~l~~~~~~v~~v 453 (556)
T TIGR01525 427 -----------------------------------------------------VHAELLPEDKLAIVKELQEEGGVVAMV 453 (556)
T ss_pred -----------------------------------------------------eeccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 667788999999999998788899999
Q ss_pred cCCccChHHhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 001888 675 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFW 750 (1000)
Q Consensus 675 GDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~ 750 (1000)
|||.||++|++.||+||++++ ....++..||+++.+ +..+..+ +..||..+.++++.+.|.+..|++.+.+.++
T Consensus 454 GDg~nD~~al~~A~vgia~g~-~~~~~~~~Ad~vi~~~~~~~l~~~-i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~ 529 (556)
T TIGR01525 454 GDGINDAPALAAADVGIAMGA-GSDVAIEAADIVLLNDDLSSLPTA-IDLSRKTRRIIKQNLAWALGYNLVAIPLAAG 529 (556)
T ss_pred ECChhHHHHHhhCCEeEEeCC-CCHHHHHhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999863 233378899999995 7778888 8999999999999999999999988655543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=410.11 Aligned_cols=404 Identities=21% Similarity=0.256 Sum_probs=313.7
Q ss_pred EEEEEE-----CCccccCC--CCCeEEeceeecCCCeEEEEEEEecchhhH---hhcCCCCCCCccHHHHHHHHHHHHHH
Q 001888 47 VGTLQY-----EGKQYPLS--PQQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLF 116 (1000)
Q Consensus 47 ~G~~~~-----~~~~~~l~--~~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki---~~n~~~~~~k~s~l~~~~n~~~~~~~ 116 (1000)
+|...+ +||+.|+. .++.+|+||.+.+ |.+.+.|+.||.+|.+ ......++.+++++++.+++++.+++
T Consensus 132 ~g~~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~-g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~ 210 (562)
T TIGR01511 132 EGESEVDESLVTGESLPVPKKVGDPVIAGTVNGT-GSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFV 210 (562)
T ss_pred ECceEEehHhhcCCCCcEEcCCCCEEEeeeEECC-ceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 455555 48888874 4699999999996 9999999999999954 44455666778999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHh
Q 001888 117 STLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQ 196 (1000)
Q Consensus 117 ~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~ 196 (1000)
+++++++++.+++|. ..+.+++.+++..|||+|+++++++...+
T Consensus 211 ~~v~~~a~~~~~~~~------------------------------------~~~~~~~svlvvacPcaL~la~p~a~~~~ 254 (562)
T TIGR01511 211 PVVIAIALITFVIWL------------------------------------FALEFAVTVLIIACPCALGLATPTVIAVA 254 (562)
T ss_pred HHHHHHHHHHHHHHH------------------------------------HHHHHHHHHHHHhccchhhhHHHHHHHHH
Confidence 988888877665432 15778899999999999999999998887
Q ss_pred HHHhhcccccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcc
Q 001888 197 SVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERT 276 (1000)
Q Consensus 197 ~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~ 276 (1000)
.. ++ +++|+++|+++.+|.||++++||||||||||+|+|++.++...+.. .
T Consensus 255 ~~------~a----a~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~-~------------------ 305 (562)
T TIGR01511 255 TG------LA----AKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR-D------------------ 305 (562)
T ss_pred HH------HH----HHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC-C------------------
Confidence 76 45 7899999999999999999999999999999999999987532210 0
Q ss_pred cccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChh
Q 001888 277 FEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPD 356 (1000)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~ 356 (1000)
. .+++..++ ++ +..+.||.
T Consensus 306 --------------------------------------------~---~~~l~~aa---~~-----------e~~s~HPi 324 (562)
T TIGR01511 306 --------------------------------------------R---TELLALAA---AL-----------EAGSEHPL 324 (562)
T ss_pred --------------------------------------------H---HHHHHHHH---HH-----------hccCCChH
Confidence 0 12222221 11 11247999
Q ss_pred HHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHH
Q 001888 357 EAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFER 436 (1000)
Q Consensus 357 e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~ 436 (1000)
+.|+++++++.|..... ...++ .+ ..+.+...+ +|+ -+..|+++.+.+.
T Consensus 325 a~Ai~~~~~~~~~~~~~-------------------~~~~~---~~----~g~Gi~~~~---~g~--~~~iG~~~~~~~~ 373 (562)
T TIGR01511 325 AKAIVSYAKEKGITLVE-------------------VSDFK---AI----PGIGVEGTV---EGT--KIQLGNEKLLGEN 373 (562)
T ss_pred HHHHHHHHHhcCCCcCC-------------------CCCeE---EE----CCceEEEEE---CCE--EEEEECHHHHHhC
Confidence 99999999877643211 01111 11 122333333 222 2345888765331
Q ss_pred HhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeee
Q 001888 437 LSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAV 516 (1000)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i 516 (1000)
+.. +..+..+|.+++.++ .|.+++|++++
T Consensus 374 ----~~~--------~~~~~~~g~~~~~~~---------------------------------------~~~~~~g~~~~ 402 (562)
T TIGR01511 374 ----AIK--------IDGKAEQGSTSVLVA---------------------------------------VNGELAGVFAL 402 (562)
T ss_pred ----CCC--------CChhhhCCCEEEEEE---------------------------------------ECCEEEEEEEe
Confidence 101 112357899998888 47899999999
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHH
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 596 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1000)
+|+++|+++++|+.|++.|++++|+|||+..++..+++++|+.
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------------------- 445 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------------------------------- 445 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------------
Confidence 9999999999999999999999999999999999999999981
Q ss_pred HHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcC
Q 001888 597 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGD 676 (1000)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGD 676 (1000)
++++..|++|.++++.++..++.|+|+||
T Consensus 446 ---------------------------------------------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGD 474 (562)
T TIGR01511 446 ---------------------------------------------------VRAEVLPDDKAALIKELQEKGRVVAMVGD 474 (562)
T ss_pred ---------------------------------------------------EEccCChHHHHHHHHHHHHcCCEEEEEeC
Confidence 34456799999999999878899999999
Q ss_pred CccChHHhhhcCccccccCccccchhccCcEEec--chhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 001888 677 GANDVGMLQEADIGVGISGVEGMQAVMSSDYAIA--QFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLF 749 (1000)
Q Consensus 677 G~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~--~f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~ 749 (1000)
|.||++|++.||+||+++... ..++..||+++. +++.+..+ +..||..++++++.+.|.+..|++.+.+.+
T Consensus 475 g~nD~~al~~A~vgia~g~g~-~~a~~~Advvl~~~~l~~l~~~-i~lsr~~~~~i~qn~~~a~~~n~~~i~la~ 547 (562)
T TIGR01511 475 GINDAPALAQADVGIAIGAGT-DVAIEAADVVLMRNDLNDVATA-IDLSRKTLRRIKQNLLWAFGYNVIAIPIAA 547 (562)
T ss_pred CCccHHHHhhCCEEEEeCCcC-HHHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999986432 337889999997 47778888 899999999999999999999988665544
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=410.42 Aligned_cols=395 Identities=19% Similarity=0.236 Sum_probs=308.3
Q ss_pred CCccccC--CCCCeEEeceeecCCCeEEEEEEEecchhhH---hhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001888 53 EGKQYPL--SPQQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGS 127 (1000)
Q Consensus 53 ~~~~~~l--~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki---~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~ 127 (1000)
+||+.|+ ..++.+|+||.+.+ |.+++.|+.||.+|.+ .......+.+++++++.+++++.++.+++++++++.+
T Consensus 106 TGEs~pv~k~~g~~v~aGt~v~~-G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (536)
T TIGR01512 106 TGESVPVEKAPGDEVFAGAINLD-GVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIW 184 (536)
T ss_pred CCCCCcEEeCCCCEEEeeeEECC-ceEEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5888887 55799999999996 9999999999999955 4444455667899999999999999998888887776
Q ss_pred HhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccc
Q 001888 128 VFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMY 207 (1000)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~ 207 (1000)
+++.+... | ...+.+++.+++.+|||+|+++++++...+.. +|
T Consensus 185 ~~~~~~~~----------~--------------------~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~------~~- 227 (536)
T TIGR01512 185 LVPGLLKR----------W--------------------PFWVYRALVLLVVASPCALVISAPAAYLSAIS------AA- 227 (536)
T ss_pred HHHHHhcc----------c--------------------HHHHHHHHHHHhhcCccccccchHHHHHHHHH------HH-
Confidence 65443211 1 11577788999999999999999999888777 55
Q ss_pred cccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCC
Q 001888 208 YEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAP 287 (1000)
Q Consensus 208 ~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1000)
.++++++|+++.+|.||+++++|||||||||+|+|++.++...
T Consensus 228 ---~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------------------------- 270 (536)
T TIGR01512 228 ---ARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------------------------- 270 (536)
T ss_pred ---HHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH----------------------------------
Confidence 8899999999999999999999999999999999999876311
Q ss_pred CCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHc
Q 001888 288 GLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREV 367 (1000)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~ 367 (1000)
+++...+.+ + ..+.||.+.||++++++.
T Consensus 271 --------------------------------------~~l~~a~~~-----e---------~~~~hp~~~Ai~~~~~~~ 298 (536)
T TIGR01512 271 --------------------------------------EVLRLAAAA-----E---------QASSHPLARAIVDYARKR 298 (536)
T ss_pred --------------------------------------HHHHHHHHH-----h---------ccCCCcHHHHHHHHHHhc
Confidence 112222211 1 124799999999999875
Q ss_pred CcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhccChhhHHH
Q 001888 368 GFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAE 447 (1000)
Q Consensus 368 g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~ 447 (1000)
+ .+ ... ..+| .+.+...+ +|..+ ..|+++.+.+. .
T Consensus 299 ~-~~----------------------~~~---~~~~----g~gi~~~~---~g~~~--~ig~~~~~~~~----~------ 333 (536)
T TIGR01512 299 E-NV----------------------ESV---EEVP----GEGVRAVV---DGGEV--RIGNPRSLEAA----V------ 333 (536)
T ss_pred C-CC----------------------cce---EEec----CCeEEEEE---CCeEE--EEcCHHHHhhc----C------
Confidence 4 00 000 0111 12222222 23322 23776544221 0
Q ss_pred HHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCCcHHH
Q 001888 448 TRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPEC 527 (1000)
Q Consensus 448 ~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v~e~ 527 (1000)
...+..+|.+++.++ .|..++|.+.++|+++|+++++
T Consensus 334 ----~~~~~~~~~~~~~v~---------------------------------------~~~~~~g~i~~~d~l~~~~~e~ 370 (536)
T TIGR01512 334 ----GARPESAGKTIVHVA---------------------------------------RDGTYLGYILLSDEPRPDAAEA 370 (536)
T ss_pred ----CcchhhCCCeEEEEE---------------------------------------ECCEEEEEEEEeccchHHHHHH
Confidence 014567788887776 4789999999999999999999
Q ss_pred HHHHHHcCC-eEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhh
Q 001888 528 IDKLAQAGI-KVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQV 606 (1000)
Q Consensus 528 I~~l~~aGI-kv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (1000)
|+.|+++|+ +++|+|||+..++..+++++|+..
T Consensus 371 i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---------------------------------------------- 404 (536)
T TIGR01512 371 IAELKALGIEKVVMLTGDRRAVAERVARELGIDE---------------------------------------------- 404 (536)
T ss_pred HHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh----------------------------------------------
Confidence 999999999 999999999999999999999821
Q ss_pred cccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChHHhhh
Q 001888 607 NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQE 686 (1000)
Q Consensus 607 ~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~mlk~ 686 (1000)
++++..|++|..+++.++..++.|+|+|||.||++|++.
T Consensus 405 -----------------------------------------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~ 443 (536)
T TIGR01512 405 -----------------------------------------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAA 443 (536)
T ss_pred -----------------------------------------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHh
Confidence 455677999999999998888999999999999999999
Q ss_pred cCccccccCccccchhccCcEEe--cchhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 001888 687 ADIGVGISGVEGMQAVMSSDYAI--AQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFW 750 (1000)
Q Consensus 687 AdvGIa~~g~e~~~ak~~aD~vl--~~f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~ 750 (1000)
||+||+++......++..||+++ .+++.+..+ +..||..++++++.+.|.+..|++.+.+.++
T Consensus 444 A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~-i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~ 508 (536)
T TIGR01512 444 ADVGIAMGASGSDVAIETADVVLLNDDLSRLPQA-IRLARRTRRIVKQNVVIALGIILLLILLALF 508 (536)
T ss_pred CCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999996222333788999999 458888887 8999999999999999999999887666554
|
. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=422.48 Aligned_cols=419 Identities=17% Similarity=0.184 Sum_probs=323.5
Q ss_pred EEEEEEE-----CCccccCCC--CCeEEeceeecCCCeEEEEEEEecchhhH---hhcCCCCCCCccHHHHHHHHHHHHH
Q 001888 46 FVGTLQY-----EGKQYPLSP--QQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLL 115 (1000)
Q Consensus 46 F~G~~~~-----~~~~~~l~~--~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki---~~n~~~~~~k~s~l~~~~n~~~~~~ 115 (1000)
.+|...+ +||+.|+.+ ++.+++||.+.+ |.+.+.|+.+|.+|.+ ....++++..++++++.++++..++
T Consensus 362 ~~g~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~-G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~ 440 (834)
T PRK10671 362 TQGEAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQD-GSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVF 440 (834)
T ss_pred EEceEEEeehhhcCCCCCEecCCCCEEEecceecc-eeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHH
Confidence 4555555 488888854 699999999996 9999999999999954 4445556667899999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHH
Q 001888 116 FSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVL 195 (1000)
Q Consensus 116 ~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~ 195 (1000)
++++++++++.+++|.+... . ..+...+..++.+++.+|||+|+++++++...
T Consensus 441 v~~v~~~a~~~~~~~~~~~~-~--------------------------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~ 493 (834)
T PRK10671 441 VPVVVVIALVSAAIWYFFGP-A--------------------------PQIVYTLVIATTVLIIACPCALGLATPMSIIS 493 (834)
T ss_pred HHHHHHHHHHHHHHHHHhCC-c--------------------------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHH
Confidence 99998888887776543211 0 01133677889999999999999999999988
Q ss_pred hHHHhhcccccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCc
Q 001888 196 QSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGER 275 (1000)
Q Consensus 196 ~~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~ 275 (1000)
+.. ++ +++|+++|+.+.+|.||+++++|||||||||+|+|++.++...+.. .
T Consensus 494 ~~~------~~----a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~---~--------------- 545 (834)
T PRK10671 494 GVG------RA----AEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV---D--------------- 545 (834)
T ss_pred HHH------HH----HHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC---C---------------
Confidence 877 45 8899999999999999999999999999999999999887532210 0
Q ss_pred ccccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCCh
Q 001888 276 TFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESP 355 (1000)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp 355 (1000)
.. +.+-.+.+++. .+.||
T Consensus 546 ---------------------------------------------~~--~~l~~a~~~e~---------------~s~hp 563 (834)
T PRK10671 546 ---------------------------------------------EA--QALRLAAALEQ---------------GSSHP 563 (834)
T ss_pred ---------------------------------------------HH--HHHHHHHHHhC---------------CCCCH
Confidence 00 01112223331 14799
Q ss_pred hHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHH
Q 001888 356 DEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFE 435 (1000)
Q Consensus 356 ~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~ 435 (1000)
.+.|++++++..+.. . ...++.+. .+.+...+ +|. .+..|+++.+.+
T Consensus 564 ~a~Ai~~~~~~~~~~---------------~------~~~~~~~~-------g~Gv~~~~---~g~--~~~~G~~~~~~~ 610 (834)
T PRK10671 564 LARAILDKAGDMTLP---------------Q------VNGFRTLR-------GLGVSGEA---EGH--ALLLGNQALLNE 610 (834)
T ss_pred HHHHHHHHHhhCCCC---------------C------cccceEec-------ceEEEEEE---CCE--EEEEeCHHHHHH
Confidence 999999988643210 0 11111110 11122221 333 245599887643
Q ss_pred HHhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEee
Q 001888 436 RLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATA 515 (1000)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~ 515 (1000)
.. ...+.+...++.++.+|.+++++|+ |..++|+++
T Consensus 611 ~~-----~~~~~~~~~~~~~~~~g~~~v~va~---------------------------------------~~~~~g~~~ 646 (834)
T PRK10671 611 QQ-----VDTKALEAEITAQASQGATPVLLAV---------------------------------------DGKAAALLA 646 (834)
T ss_pred cC-----CChHHHHHHHHHHHhCCCeEEEEEE---------------------------------------CCEEEEEEE
Confidence 11 1123456667788899999999994 567999999
Q ss_pred ecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHH
Q 001888 516 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESV 595 (1000)
Q Consensus 516 i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1000)
++|++||+++++|+.|++.|++++|+|||+..+|..+++++|+..
T Consensus 647 l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~----------------------------------- 691 (834)
T PRK10671 647 IRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE----------------------------------- 691 (834)
T ss_pred ccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE-----------------------------------
Confidence 999999999999999999999999999999999999999999831
Q ss_pred HHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEc
Q 001888 596 TKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIG 675 (1000)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiG 675 (1000)
++++..|++|.++++.++..++.|+|+|
T Consensus 692 ----------------------------------------------------~~~~~~p~~K~~~i~~l~~~~~~v~~vG 719 (834)
T PRK10671 692 ----------------------------------------------------VIAGVLPDGKAEAIKRLQSQGRQVAMVG 719 (834)
T ss_pred ----------------------------------------------------EEeCCCHHHHHHHHHHHhhcCCEEEEEe
Confidence 6677889999999999988889999999
Q ss_pred CCccChHHhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q 001888 676 DGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTL 748 (1000)
Q Consensus 676 DG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~ 748 (1000)
||.||++|++.||+||+|++.. ..++++||+++.+ +..+..+ +..||..+.++++.+.+.+.+|++.+.+.
T Consensus 720 Dg~nD~~al~~Agvgia~g~g~-~~a~~~ad~vl~~~~~~~i~~~-i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a 792 (834)
T PRK10671 720 DGINDAPALAQADVGIAMGGGS-DVAIETAAITLMRHSLMGVADA-LAISRATLRNMKQNLLGAFIYNSLGIPIA 792 (834)
T ss_pred CCHHHHHHHHhCCeeEEecCCC-HHHHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999996533 3388999999986 6668777 89999999999999999999998775544
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=324.11 Aligned_cols=437 Identities=18% Similarity=0.229 Sum_probs=319.8
Q ss_pred eEEEEEEEC-----CccccCCC--C---CeEEeceeecCCCeEEEEEEEecchh---hHhhcCCCCCCCccHHHHHHHHH
Q 001888 45 SFVGTLQYE-----GKQYPLSP--Q---QILLRDSKLKNTDYVYGVVVFTGHDT---KVMQNATDPPSKRSKIERKMDKI 111 (1000)
Q Consensus 45 ~F~G~~~~~-----~~~~~l~~--~---n~l~~Gs~l~~tg~~~g~Vv~tG~~T---ki~~n~~~~~~k~s~l~~~~n~~ 111 (1000)
.-+|...+| ||+-|+-+ + .-+-.||.+. ++|+...++..--+| |+....+.+..+++|=|-.++.+
T Consensus 143 VIeG~asVdESAITGESaPViresGgD~ssVtGgT~v~-SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iL 221 (681)
T COG2216 143 VIEGVASVDESAITGESAPVIRESGGDFSSVTGGTRVL-SDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTIL 221 (681)
T ss_pred EEeeeeecchhhccCCCcceeeccCCCcccccCCcEEe-eeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHH
Confidence 456777775 78888722 2 5689999999 599999998888888 66666788888899999888877
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHH
Q 001888 112 VYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEI 191 (1000)
Q Consensus 112 ~~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~ 191 (1000)
...+.++.++ ++++..-+..|.... -......+.|++++||..+.-
T Consensus 222 L~~LTliFL~-~~~Tl~p~a~y~~g~-----------------------------~~~i~~LiALlV~LIPTTIGg---- 267 (681)
T COG2216 222 LSGLTLIFLL-AVATLYPFAIYSGGG-----------------------------AASVTVLVALLVCLIPTTIGG---- 267 (681)
T ss_pred HHHHHHHHHH-HHHhhhhHHHHcCCC-----------------------------CcCHHHHHHHHHHHhcccHHH----
Confidence 6666543222 222211111121100 013556678889999987544
Q ss_pred HHHHhHHHhhcccccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhh
Q 001888 192 VKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKR 271 (1000)
Q Consensus 192 ~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~ 271 (1000)
++.+..|.-..|+ .+.+++.++..++|..|.||++..|||||+|-|+-.-.++...+..
T Consensus 268 --LLsAIGIAGMdRv----~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv--------------- 326 (681)
T COG2216 268 --LLSAIGIAGMDRV----TQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGV--------------- 326 (681)
T ss_pred --HHHHhhhhhhhHh----hhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCCC---------------
Confidence 3444445444477 8889999999999999999999999999999987655544332211
Q ss_pred cCCcccccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEe
Q 001888 272 KGERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYE 351 (1000)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~ 351 (1000)
..+++..+..+++-.
T Consensus 327 ---------------------------------------------------~~~~la~aa~lsSl~-------------- 341 (681)
T COG2216 327 ---------------------------------------------------SEEELADAAQLASLA-------------- 341 (681)
T ss_pred ---------------------------------------------------CHHHHHHHHHHhhhc--------------
Confidence 123445555544322
Q ss_pred eCChhHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEE-EEEeeCCCCCCceEEEEEEcCCCcEEEEEccch
Q 001888 352 AESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYE-LLHVLEFTSSRKRMSVMVRNPENQLLLLCKGAD 430 (1000)
Q Consensus 352 ~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~ 430 (1000)
.+.|+-+.+++.|++.|+.+..+ ... .-..+||+.+.|++++-.. ++ .-+-|||.
T Consensus 342 DeTpEGrSIV~LA~~~~~~~~~~--------------------~~~~~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~ 397 (681)
T COG2216 342 DETPEGRSIVELAKKLGIELRED--------------------DLQSHAEFVPFTAQTRMSGVDLP--GG--REIRKGAV 397 (681)
T ss_pred cCCCCcccHHHHHHHhccCCCcc--------------------cccccceeeecceecccccccCC--CC--ceeecccH
Confidence 25788899999999998654321 111 2346899998887777654 33 56789999
Q ss_pred hHhHHHHhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhcccee
Q 001888 431 SVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLIL 510 (1000)
Q Consensus 431 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~ 510 (1000)
+.+.......+...++++...+++-++.|-.+|+++ .|-.+
T Consensus 398 dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~---------------------------------------~~~~~ 438 (681)
T COG2216 398 DAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVV---------------------------------------ENGRI 438 (681)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEE---------------------------------------ECCEE
Confidence 999999887666688899999999999999999999 47889
Q ss_pred eEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHH
Q 001888 511 LGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKV 590 (1000)
Q Consensus 511 lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 590 (1000)
+|++.++|-+++|.+|-+.+||+.|||.+|+|||++.||..||++.|+.+
T Consensus 439 ~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd------------------------------ 488 (681)
T COG2216 439 LGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------------------------ 488 (681)
T ss_pred EEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh------------------------------
Confidence 99999999999999999999999999999999999999999999999831
Q ss_pred HHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCE
Q 001888 591 SLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKT 670 (1000)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~ 670 (1000)
..+.++|++|..+++.-|..|+.
T Consensus 489 ---------------------------------------------------------fiAeatPEdK~~~I~~eQ~~grl 511 (681)
T COG2216 489 ---------------------------------------------------------FIAEATPEDKLALIRQEQAEGRL 511 (681)
T ss_pred ---------------------------------------------------------hhhcCChHHHHHHHHHHHhcCcE
Confidence 34678899999999999999999
Q ss_pred EEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchhh--hHHHHHHhhhhhhhhhhhHHHHHHHHHHH---HH
Q 001888 671 TLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF--LERLLLVHGHWCYRRISMMICYFFYKNLT---FG 745 (1000)
Q Consensus 671 vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~~--l~~lll~~gR~~~~~i~~~i~~~~~~n~~---~~ 745 (1000)
|+|+|||.||+|+|.+||||++|.... ..||++++.+=.|-+. +.+. +.-|++..-.--.+..|++.--+. .+
T Consensus 512 VAMtGDGTNDAPALAqAdVg~AMNsGT-qAAkEAaNMVDLDS~PTKliev-V~IGKqlLiTRGaLTTFSIANDvAKYFaI 589 (681)
T COG2216 512 VAMTGDGTNDAPALAQADVGVAMNSGT-QAAKEAANMVDLDSNPTKLIEV-VEIGKQLLITRGALTTFSIANDVAKYFAI 589 (681)
T ss_pred EEEcCCCCCcchhhhhcchhhhhcccc-HHHHHhhcccccCCCccceehH-hhhhhhheeecccceeeehhhHHHHHHHH
Confidence 999999999999999999999994332 2289999998666322 3333 455665543333333344433222 33
Q ss_pred HHHHHHHHH
Q 001888 746 FTLFWYEAY 754 (1000)
Q Consensus 746 ~~~~~~~~~ 754 (1000)
++.+++.++
T Consensus 590 iPA~F~~~~ 598 (681)
T COG2216 590 IPAMFAAAY 598 (681)
T ss_pred HHHHHHhhc
Confidence 555555555
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.3e-20 Score=196.35 Aligned_cols=97 Identities=33% Similarity=0.514 Sum_probs=90.4
Q ss_pred cceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHH
Q 001888 507 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 586 (1000)
Q Consensus 507 ~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 586 (1000)
++.++|.+.+.|+++++++++|+.|+++|++++|+|||+..+|..+++.+||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 789999999999999999999999999999999999999999999999999922
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcC--ChhhH--HHHHH
Q 001888 587 ITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRS--SPKQK--ALVTR 662 (1000)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~--sp~qK--~~iV~ 662 (1000)
..+++++ +|++| .++++
T Consensus 169 -----------------------------------------------------------~~v~a~~~~kP~~k~~~~~i~ 189 (215)
T PF00702_consen 169 -----------------------------------------------------------SIVFARVIGKPEPKIFLRIIK 189 (215)
T ss_dssp -----------------------------------------------------------EEEEESHETTTHHHHHHHHHH
T ss_pred -----------------------------------------------------------ccccccccccccchhHHHHHH
Confidence 2488899 99999 99999
Q ss_pred HHhcCCCEEEEEcCCccChHHhhhcC
Q 001888 663 LVKGTGKTTLAIGDGANDVGMLQEAD 688 (1000)
Q Consensus 663 ~l~~~~~~vlaiGDG~ND~~mlk~Ad 688 (1000)
.++..+..|+|+|||.||++|+++||
T Consensus 190 ~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 190 ELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred HHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99866669999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.1e-14 Score=128.71 Aligned_cols=90 Identities=29% Similarity=0.498 Sum_probs=71.4
Q ss_pred hhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceE
Q 001888 332 AICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRM 411 (1000)
Q Consensus 332 ~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 411 (1000)
+|||++....+++.+..+ ..|+|+|.||++++.+.|..+.. ...+..|++++++||||+||||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~----------------~~~~~~~~~~~~~pF~S~rK~m 63 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDI----------------KEIRSKYKIVAEIPFDSERKRM 63 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcH----------------HHHHhhcceeEEEccCccccee
Confidence 689999886655333322 45899999999999999654321 1137889999999999999999
Q ss_pred EEEEEcCCCcEEEEEccchhHhHHHHhc
Q 001888 412 SVMVRNPENQLLLLCKGADSVMFERLSK 439 (1000)
Q Consensus 412 sviv~~~~~~~~l~~KGa~~~i~~~~~~ 439 (1000)
+|+++ .++.+++|+|||||.|+++|+.
T Consensus 64 svv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 64 SVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999 3345778999999999999974
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.9e-13 Score=121.82 Aligned_cols=126 Identities=24% Similarity=0.387 Sum_probs=108.4
Q ss_pred ceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHH
Q 001888 508 LILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENI 587 (1000)
Q Consensus 508 l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 587 (1000)
....+.++=--++=++|+++|+.|++. ++++++|||.+.+....|.-.|+...
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 567788888889999999999999999 99999999999999999998886321
Q ss_pred HHHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcC
Q 001888 588 TKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGT 667 (1000)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~ 667 (1000)
.+++-..|+.|+.+++.++++
T Consensus 72 -----------------------------------------------------------rv~a~a~~e~K~~ii~eLkk~ 92 (152)
T COG4087 72 -----------------------------------------------------------RVFAGADPEMKAKIIRELKKR 92 (152)
T ss_pred -----------------------------------------------------------eeecccCHHHHHHHHHHhcCC
Confidence 278888899999999999889
Q ss_pred CCEEEEEcCCccChHHhhhcCccccccCcccc--chhccCcEEecchhhhHHHH
Q 001888 668 GKTTLAIGDGANDVGMLQEADIGVGISGVEGM--QAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 668 ~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~--~ak~~aD~vl~~f~~l~~ll 719 (1000)
++.|.|+|||+||.+||++||+||..-+.++. .+..+||+++.+...+..++
T Consensus 93 ~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 93 YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 99999999999999999999999965444442 24588999999877766664
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.2e-13 Score=146.68 Aligned_cols=130 Identities=25% Similarity=0.381 Sum_probs=102.1
Q ss_pred cCCCCCeEEeceeecCCCeEEEEEEEecchhhHh---hcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 001888 58 PLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVM---QNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIET 134 (1000)
Q Consensus 58 ~l~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki~---~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~ 134 (1000)
+.+.+|++++||.+. +||++|+|++||.+|++. ....+++.+++++++.++++..+++++.+++++++++++.++.
T Consensus 98 ~~~~~~~i~~Gs~v~-~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (230)
T PF00122_consen 98 PLNPGNIIFAGSIVV-SGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFND 176 (230)
T ss_dssp CCCTTTEE-TTEEEE-EEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTGS
T ss_pred cccccchhhcccccc-ccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceecc
Confidence 344899999999999 599999999999999653 3344566678999999999999999988888887776554421
Q ss_pred ccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccccccCCCc
Q 001888 135 KRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKP 214 (1000)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~ 214 (1000)
. . ..| ...+..++.+++.++|++|++++++....++. +| .+++
T Consensus 177 ~-~------~~~--------------------~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~------~~----~~~~ 219 (230)
T PF00122_consen 177 S-G------ISF--------------------FKSFLFAISLLIVLIPCALPLALPLSLAIAAR------RL----AKNG 219 (230)
T ss_dssp T-T------CHC--------------------CHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHH------HH----HHTT
T ss_pred c-c------ccc--------------------ccccccccceeeeecccceeehHHHHHHHHHH------HH----HHCC
Confidence 1 0 123 23688889999999999999999999999888 55 7789
Q ss_pred ceecccccccc
Q 001888 215 ARARTSNLNEE 225 (1000)
Q Consensus 215 ~~v~~~~~~E~ 225 (1000)
+++|+++++|+
T Consensus 220 i~v~~~~a~E~ 230 (230)
T PF00122_consen 220 IIVKNLSALEA 230 (230)
T ss_dssp EEESSTTHHHH
T ss_pred EEEeCcccccC
Confidence 99999999985
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.9e-11 Score=121.16 Aligned_cols=172 Identities=10% Similarity=0.134 Sum_probs=124.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccccCCccchhhHHHhhHHHHHHHHHHHHHHHhhhccc
Q 001888 762 AYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQ 841 (1000)
Q Consensus 762 ~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 841 (1000)
++++.|++|.|++.+.+|+++++.++ ++++.+.+.|+ ++++++++++.+...+..|+++++++++.++......
T Consensus 3 Pl~~~qiL~inli~d~~~a~al~~e~--~~~~im~r~Pr----~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~ 76 (182)
T PF00689_consen 3 PLTPIQILWINLITDLLPALALGFEP--PDPDIMKRPPR----DPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIF 76 (182)
T ss_dssp SS-HHHHHHHHHTTTHHHHHHGGGSS---STTGGGS-------TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHST
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhcCc--chhhhhhcccc----ccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 58899999999999999999999864 44455555555 6788999999999999999999999988877665421
Q ss_pred cccCCCcccchhhhhHHHHHHHHHHHHHHHHHHhhc--------chhHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhHH
Q 001888 842 AFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINY--------FTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYK 913 (1000)
Q Consensus 842 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--------~~~~~~~~~~~si~~~~~~~~~~~~~~~~~~~~~~~ 913 (1000)
.....+...+.....|+.|+++++.+.+..+. .++ .....|..++.++++.++++++..++|. ++.
T Consensus 77 ~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~-~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~-~~~---- 150 (182)
T PF00689_consen 77 GWDEETNNDNLAQAQTMAFTALVLSQLFNAFN-CRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPG-LNR---- 150 (182)
T ss_dssp CSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTT-HHH----
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHhhhcc-cccccccceecccccccchHHHHHHHHHHHHHHHhcchh-hHh----
Confidence 11111111124467899999999888777543 222 2345677888899999988888888883 233
Q ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH
Q 001888 914 VLVEACAPSILYWLTTLLVVVSTLLPYFLYRAF 946 (1000)
Q Consensus 914 ~~~~~~~~~~~~w~~~i~~~~~~ll~~~i~k~~ 946 (1000)
+++....++..|+.++..+++.++..++.|.+
T Consensus 151 -~f~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 151 -IFGTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp -HST----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred -hhcccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 55577889999999999999999999999875
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.1e-10 Score=125.21 Aligned_cols=60 Identities=22% Similarity=0.339 Sum_probs=50.2
Q ss_pred cCChh--hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 651 RSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 651 r~sp~--qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
...|. .|+..++.+ +..| ..|++||||.||++||+.|++||||+++... +|..||++..+
T Consensus 189 eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~-vK~~A~~vt~~ 254 (270)
T PRK10513 189 EILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPS-VKEVAQFVTKS 254 (270)
T ss_pred EEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHH-HHHhcCeeccC
Confidence 44443 699999998 6665 5699999999999999999999999776554 89999999865
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.8e-10 Score=122.37 Aligned_cols=197 Identities=17% Similarity=0.093 Sum_probs=104.8
Q ss_pred cceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccc----cCceEEEE-ecCCchhhHhhhh
Q 001888 507 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR----QEMKQIVI-TLDSPDMEALEKQ 581 (1000)
Q Consensus 507 ~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~----~~~~~~~i-~~~~~~~~~~~~~ 581 (1000)
|.|++.- ...+.+.+.++|++|+++|++++++|||+...+..+.+++++.. .++..+.. +++......+..+
T Consensus 10 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~ 86 (272)
T PRK15126 10 DGTLLMP---DHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPAD 86 (272)
T ss_pred CCcCcCC---CCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHH
Confidence 5566642 23588899999999999999999999999999999999998632 23332221 1111111122222
Q ss_pred ccHHHHHHHHHHHHH---------------HHHHh--hhhh--hcc---c-cc-CccceEEEEeccchHHHhhHHHHHHH
Q 001888 582 GDKENITKVSLESVT---------------KQIRE--GISQ--VNS---A-KE-SKVTFGLVIDGKSLDFALDKKLEKMF 637 (1000)
Q Consensus 582 ~~~~~~~~~~~~~~~---------------~~~~~--~~~~--~~~---~-~~-~~~~~~lvi~g~~l~~~~~~~~~~~~ 637 (1000)
...+.++........ ..... .... ... . .. ......+++ +.. +. + +++...+
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~-~~~-~~-~-~~~~~~l 162 (272)
T PRK15126 87 VAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFC-GDH-DD-L-TRLQIQL 162 (272)
T ss_pred HHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEE-CCH-HH-H-HHHHHHH
Confidence 222222111110000 00000 0000 000 0 00 000111111 111 00 0 1122222
Q ss_pred HHHHh-hcC----ceEEEcCChh--hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCc
Q 001888 638 LDLAI-DCA----SVICCRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD 706 (1000)
Q Consensus 638 ~~~~~-~~~----~vi~~r~sp~--qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD 706 (1000)
..... ... ..-+..++|. .|+..++.+ +..| ..|++||||.||++||+.|+.||||+++... +|..||
T Consensus 163 ~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~-vK~~A~ 241 (272)
T PRK15126 163 NEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQ-LRAELP 241 (272)
T ss_pred HHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHH-HHHhCC
Confidence 11110 000 0013345555 599999999 6666 5699999999999999999999999776544 899998
Q ss_pred E--Eecc
Q 001888 707 Y--AIAQ 711 (1000)
Q Consensus 707 ~--vl~~ 711 (1000)
+ ++.+
T Consensus 242 ~~~v~~~ 248 (272)
T PRK15126 242 HLPVIGH 248 (272)
T ss_pred CCeecCC
Confidence 6 5543
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.5e-09 Score=116.20 Aligned_cols=55 Identities=27% Similarity=0.419 Sum_probs=46.9
Q ss_pred hHHHHHHHH-hcCCC---EEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 656 QKALVTRLV-KGTGK---TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 656 qK~~iV~~l-~~~~~---~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
.|+..++.+ +..|. .|+|+|||.||++||+.|+.||+|+++ ...+++.||++...
T Consensus 189 ~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na-~~~~k~~A~~vt~~ 247 (264)
T COG0561 189 SKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA-DEELKELADYVTTS 247 (264)
T ss_pred chHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC-CHHHHhhCCcccCC
Confidence 699999998 76664 499999999999999999999999877 44499999976544
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.5e-09 Score=118.06 Aligned_cols=198 Identities=17% Similarity=0.109 Sum_probs=104.6
Q ss_pred cceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccc----cCceEEEE-ecCCchhhHhhhh
Q 001888 507 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR----QEMKQIVI-TLDSPDMEALEKQ 581 (1000)
Q Consensus 507 ~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~----~~~~~~~i-~~~~~~~~~~~~~ 581 (1000)
|.|++.- ...+.+.+.++|++++++|++++++|||....+..+...+++.. .++..+.. +++......+..+
T Consensus 10 DGTLl~~---~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~ 86 (266)
T PRK10976 10 DGTLLSP---DHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRD 86 (266)
T ss_pred CCCCcCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHH
Confidence 5566532 23488889999999999999999999999999999999988632 23332221 1111112222222
Q ss_pred ccHHHHHHHHHH-HHHHHHHhh---------------hh----hhcc----cccC-ccceEEEEeccchHHHhhHHHHHH
Q 001888 582 GDKENITKVSLE-SVTKQIREG---------------IS----QVNS----AKES-KVTFGLVIDGKSLDFALDKKLEKM 636 (1000)
Q Consensus 582 ~~~~~~~~~~~~-~~~~~~~~~---------------~~----~~~~----~~~~-~~~~~lvi~g~~l~~~~~~~~~~~ 636 (1000)
...+.+...... .+...+... .. .... .... ......+..+.. ... +.+.+.
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~-~~~--~~~~~~ 163 (266)
T PRK10976 87 IASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSH-EKL--LPLEQA 163 (266)
T ss_pred HHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCH-HHH--HHHHHH
Confidence 222222211110 000000000 00 0000 0000 000111111110 000 111222
Q ss_pred HHHHHh-hcC----ceEEEcCChh--hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccC
Q 001888 637 FLDLAI-DCA----SVICCRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSS 705 (1000)
Q Consensus 637 ~~~~~~-~~~----~vi~~r~sp~--qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~a 705 (1000)
+..... ... ..-+..+.|. .|+..++.+ +..| ..|+|||||.||++||+.|++||||+++... +|+.|
T Consensus 164 l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~-vK~~A 242 (266)
T PRK10976 164 INARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQR-LKDLL 242 (266)
T ss_pred HHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHH-HHHhC
Confidence 211110 000 0113344554 599999998 6666 5699999999999999999999999776554 89998
Q ss_pred c--EEecc
Q 001888 706 D--YAIAQ 711 (1000)
Q Consensus 706 D--~vl~~ 711 (1000)
| ++..+
T Consensus 243 ~~~~v~~~ 250 (266)
T PRK10976 243 PELEVIGS 250 (266)
T ss_pred CCCeeccc
Confidence 7 66553
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.1e-09 Score=126.43 Aligned_cols=60 Identities=30% Similarity=0.407 Sum_probs=50.0
Q ss_pred cCChh--hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 651 RSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 651 r~sp~--qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
.+.|. .|+..++.+ +..| ..|+|||||.||++||+.|++||||+|+... +|..||+|..+
T Consensus 500 EI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~ee-VK~~Ad~VT~s 565 (580)
T PLN02887 500 EIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEK-TKAVADVIGVS 565 (580)
T ss_pred EEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHH-HHHhCCEEeCC
Confidence 44443 699999998 6666 5699999999999999999999999776554 89999998864
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.1e-08 Score=108.43 Aligned_cols=182 Identities=16% Similarity=0.171 Sum_probs=95.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchh-----hHhhhhccHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDM-----EALEKQGDKENITKVSLE 593 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~~~~ 593 (1000)
.+.+.+.++|++++++||+++++|||+...+..+.+.+|+.. ..+..++..... ..................
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD---PVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---eEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh
Confidence 477889999999999999999999999999999999998422 222222221000 000000000000000000
Q ss_pred HHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCCh--hhHHHHHHHH-hcCC--
Q 001888 594 SVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSP--KQKALVTRLV-KGTG-- 668 (1000)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp--~qK~~iV~~l-~~~~-- 668 (1000)
.......+............+......+.. . .+.+.+......+....+....| ..|...++.+ +..|
T Consensus 92 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~ 164 (225)
T TIGR01482 92 -----KTFPFSRLKVQYPRRASLVKMRYGIDVDTV-R-EIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIK 164 (225)
T ss_pred -----cccchhhhccccccccceEEEeecCCHHHH-H-HHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCC
Confidence 000000000000000011111111111111 0 11111110000000112333444 3698888888 5555
Q ss_pred -CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 669 -KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 669 -~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
..+++|||+.||++|++.|++||+|.++... +|..||++..+
T Consensus 165 ~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~-~k~~A~~vt~~ 207 (225)
T TIGR01482 165 PGETLVCGDSENDIDLFEVPGFGVAVANAQPE-LKEWADYVTES 207 (225)
T ss_pred HHHEEEECCCHhhHHHHHhcCceEEcCChhHH-HHHhcCeecCC
Confidence 5699999999999999999999999776544 89999998764
|
catalyze the same reaction as SPP. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.3e-08 Score=108.10 Aligned_cols=179 Identities=17% Similarity=0.211 Sum_probs=97.0
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccc----cCceEEEEe--cCCchhhHhhhhccHHHHHHHHHH
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR----QEMKQIVIT--LDSPDMEALEKQGDKENITKVSLE 593 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~----~~~~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~ 593 (1000)
+.+.+.++|++++++|++++++|||+...+..+++.+++.. .++..+... +.......++ ...+.+....
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~--~~~~~~~~~~-- 96 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIE--ECEKAYSELK-- 96 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchH--HHHHHHHHHH--
Confidence 77899999999999999999999999999999999988632 222222221 1100111111 0001111100
Q ss_pred HHHHHHHhhhhhhcccccCccceEE-EEeccchHHHhhHHHHHHHHHHHhh---cCceEEEcCChh--hHHHHHHHH-hc
Q 001888 594 SVTKQIREGISQVNSAKESKVTFGL-VIDGKSLDFALDKKLEKMFLDLAID---CASVICCRSSPK--QKALVTRLV-KG 666 (1000)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~l-vi~g~~l~~~~~~~~~~~~~~~~~~---~~~vi~~r~sp~--qK~~iV~~l-~~ 666 (1000)
.........+...........+ +....... +....+...... .....+....|. .|+..++.+ +.
T Consensus 97 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~ 168 (230)
T PRK01158 97 ---KRFPEASTSLTKLDPDYRKTEVALRRTVPVE-----EVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAEL 168 (230)
T ss_pred ---HhccccceeeecCCcccccceeeecccccHH-----HHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHH
Confidence 0000000000000000000011 11111111 111222111000 011112344444 499988888 55
Q ss_pred CC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 667 TG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 667 ~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
.| ..++++|||.||++|++.|++||+|++.... +|..||++..+
T Consensus 169 ~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~-vk~~a~~v~~~ 215 (230)
T PRK01158 169 MGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEE-LKEAADYVTEK 215 (230)
T ss_pred hCCCHHHEEEECCchhhHHHHHhcCceEEecCccHH-HHHhcceEecC
Confidence 44 4699999999999999999999999776554 89999998864
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.9e-09 Score=113.73 Aligned_cols=192 Identities=16% Similarity=0.153 Sum_probs=103.0
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc----ccCceEEEEecCC--chhhHhhhhccHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL----RQEMKQIVITLDS--PDMEALEKQGDKENITKVS 591 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~----~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~ 591 (1000)
..+.+.+.++|++|+++|++++++|||.+..+..+..++++. ..++..+ ..... .....+..+...+.+....
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i-~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALI-DDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEE-EETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhccccccee-eecccccchhhheeccchhheeehhh
Confidence 347789999999999999999999999999999999998864 1222222 11111 1111222222222222222
Q ss_pred HHHHHHHHHhhhhhh-------------------c-------ccccCccceEEEEeccchHHHhhHHHHHHHHHHHh-hc
Q 001888 592 LESVTKQIREGISQV-------------------N-------SAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI-DC 644 (1000)
Q Consensus 592 ~~~~~~~~~~~~~~~-------------------~-------~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~-~~ 644 (1000)
...+...+......+ . .....................+.+++.+.+..... ..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 211100000000000 0 00000011111111111111112233333321100 00
Q ss_pred CceEEEcCCh--hhHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 645 ASVICCRSSP--KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 645 ~~vi~~r~sp--~qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
...-+..++| ..|+..++.+ +..| +.++++||+.||.+|++.||.||+|+++... ++..||++...
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~-~k~~a~~i~~~ 244 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPE-LKKAADYITPS 244 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HH-HHHHSSEEESS
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHH-HHHhCCEEecC
Confidence 0001223444 4699999988 5544 6799999999999999999999999777654 89999999876
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.5e-08 Score=107.47 Aligned_cols=197 Identities=15% Similarity=0.154 Sum_probs=101.0
Q ss_pred cceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc-----ccCceEEEEecCCc-------h
Q 001888 507 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL-----RQEMKQIVITLDSP-------D 574 (1000)
Q Consensus 507 ~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~-----~~~~~~~~i~~~~~-------~ 574 (1000)
|.|++.- ...+-+.++++|++|+++||+++++|||....+..+++++|+- ..++..+....... .
T Consensus 15 DGTLL~~---~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~ 91 (271)
T PRK03669 15 DGTLLDS---HTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRI 91 (271)
T ss_pred ccCCcCC---CCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEe
Confidence 5566531 2235567899999999999999999999999999999999873 12333332211100 0
Q ss_pred hhHhhhhccHHHHHHHHHH-HHH---------HHHHhhh----hhhcccccCccceEEEEeccchHHHhhHHHHHHHHHH
Q 001888 575 MEALEKQGDKENITKVSLE-SVT---------KQIREGI----SQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDL 640 (1000)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~-~~~---------~~~~~~~----~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~ 640 (1000)
...++.+...+.++..... ... ....... ..............+.+.+... .+ .++.+.+...
T Consensus 92 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~l~~~ 168 (271)
T PRK03669 92 ISGISHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDE--RM-AQFTARLAEL 168 (271)
T ss_pred ecCCCHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHH--HH-HHHHHHHHHC
Confidence 1112222222222221111 000 0000000 0000000000011122222110 01 1122222210
Q ss_pred HhhcCc---eEEEcCChh--hHHHHHHHH-hcCC------CEEEEEcCCccChHHhhhcCccccccCccc--cc---hhc
Q 001888 641 AIDCAS---VICCRSSPK--QKALVTRLV-KGTG------KTTLAIGDGANDVGMLQEADIGVGISGVEG--MQ---AVM 703 (1000)
Q Consensus 641 ~~~~~~---vi~~r~sp~--qK~~iV~~l-~~~~------~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~--~~---ak~ 703 (1000)
.+.. .-+..+.|. .|+..++.+ +..| ..|+|+|||.||++||+.|++||||++... .+ .+.
T Consensus 169 --~~~~~~~~~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~ 246 (271)
T PRK03669 169 --GLQFVQGARFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDP 246 (271)
T ss_pred --CCEEEecCeeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccC
Confidence 1111 113355553 699988888 5443 579999999999999999999999974331 11 234
Q ss_pred cCcEEecc
Q 001888 704 SSDYAIAQ 711 (1000)
Q Consensus 704 ~aD~vl~~ 711 (1000)
.+|++...
T Consensus 247 ~~~~~~~~ 254 (271)
T PRK03669 247 ARVYRTQR 254 (271)
T ss_pred CceEeccC
Confidence 68887765
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.74 E-value=7.8e-08 Score=99.56 Aligned_cols=120 Identities=24% Similarity=0.261 Sum_probs=89.0
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
.++.+++.+.++.++++|.+++++||-...-+..+|+.+|+...-.+.+.....
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC--------------------------
Confidence 689999999999999999999999999999999999999996543332222110
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCC---CEEEE
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLA 673 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~---~~vla 673 (1000)
.++|. ++.-.+..+.|...++.+ ...| +.+.|
T Consensus 130 ---------------------~ltG~-----------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a 165 (212)
T COG0560 130 ---------------------KLTGR-----------------------VVGPICDGEGKAKALRELAAELGIPLEETVA 165 (212)
T ss_pred ---------------------EEece-----------------------eeeeecCcchHHHHHHHHHHHcCCCHHHeEE
Confidence 12222 233344456788877666 5555 35999
Q ss_pred EcCCccChHHhhhcCccccccCccccchhccCcEEe
Q 001888 674 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAI 709 (1000)
Q Consensus 674 iGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl 709 (1000)
+|||.||.|||+.||.+|++..... ....|+..+
T Consensus 166 ~gDs~nDlpml~~ag~~ia~n~~~~--l~~~a~~~~ 199 (212)
T COG0560 166 YGDSANDLPMLEAAGLPIAVNPKPK--LRALADVRI 199 (212)
T ss_pred EcCchhhHHHHHhCCCCeEeCcCHH--HHHHHHHhc
Confidence 9999999999999999999976654 344455443
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.8e-08 Score=110.05 Aligned_cols=55 Identities=27% Similarity=0.427 Sum_probs=46.2
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
.|+..++.+ +..| ..|+||||+.||++|++.|++||+|+++. ..++..||++..+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~-~~lk~~Ad~v~~~ 257 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNAD-DAVKARADLVIGD 257 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCch-HHHHHhCCEEEec
Confidence 598888877 6655 46999999999999999999999997654 4478899999865
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.72 E-value=3e-08 Score=104.15 Aligned_cols=185 Identities=16% Similarity=0.194 Sum_probs=101.2
Q ss_pred cceeeEEeeecc-cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccc----cCceEEEEecCCchhhHhhhh
Q 001888 507 DLILLGATAVED-KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR----QEMKQIVITLDSPDMEALEKQ 581 (1000)
Q Consensus 507 ~l~~lG~i~i~D-~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~----~~~~~~~i~~~~~~~~~~~~~ 581 (1000)
|.|++. .| ++.+.+.++|++|+++|++++++|||+...+..+++.+++.. .++..+........ ....
T Consensus 9 DGTLl~----~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~---~~~~ 81 (215)
T TIGR01487 9 DGTLTE----PNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIF---LANM 81 (215)
T ss_pred CCCcCC----CCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEE---Eecc
Confidence 455553 33 488899999999999999999999999999999999988642 22222222111100 0000
Q ss_pred ccHHHHHHHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHh-hcCceEEEcCCh--hhHH
Q 001888 582 GDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI-DCASVICCRSSP--KQKA 658 (1000)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~-~~~~vi~~r~sp--~qK~ 658 (1000)
.. ..+....... ... ....... .......+..++..... +...+..... ...+..+..++| ..|+
T Consensus 82 ~~-~~~~~~~~~~--~~~---~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~l~~~~~~~~~~~~~~ei~~~~~~K~ 149 (215)
T TIGR01487 82 EE-EWFLDEEKKK--RFP---RDRLSNE-YPRASLVIMREGKDVDE-----VREIIKERGLNLVDSGFAIHIMKKGVDKG 149 (215)
T ss_pred cc-hhhHHHhhhh--hhh---hhhcccc-cceeEEEEecCCccHHH-----HHHHHHhCCeEEEecCceEEEecCCCChH
Confidence 00 0000000000 000 0000000 00111122223322221 1111111000 000001223333 4799
Q ss_pred HHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 659 LVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 659 ~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
..++.+ +..| ..+++|||+.||++|++.|++||+|.+.... ++..||++..+
T Consensus 150 ~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~-~k~~A~~v~~~ 205 (215)
T TIGR01487 150 VGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVANADDQ-LKEIADYVTSN 205 (215)
T ss_pred HHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEcCCccHH-HHHhCCEEcCC
Confidence 999988 5554 3599999999999999999999999776544 89999999864
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.9e-08 Score=107.50 Aligned_cols=129 Identities=24% Similarity=0.219 Sum_probs=90.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.|++.+.++.|++.|+++.++||.....+..+..++|+..--.+.+.+...
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg--------------------------- 233 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG--------------------------- 233 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC---------------------------
Confidence 58899999999999999999999999988888888888874211111111000
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCC---CEEEEE
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 674 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~---~~vlai 674 (1000)
.++|.... .-+..+.|..+++.+ ++.| ..|+||
T Consensus 234 --------------------~ltg~v~g-----------------------~iv~~k~K~~~L~~la~~lgi~~~qtIaV 270 (322)
T PRK11133 234 --------------------KLTGNVLG-----------------------DIVDAQYKADTLTRLAQEYEIPLAQTVAI 270 (322)
T ss_pred --------------------EEEeEecC-----------------------ccCCcccHHHHHHHHHHHcCCChhhEEEE
Confidence 01111000 002235688888877 5554 679999
Q ss_pred cCCccChHHhhhcCccccccCccccchhccCcEEecchhhhHHHHH
Q 001888 675 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLL 720 (1000)
Q Consensus 675 GDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~~l~~lll 720 (1000)
|||.||++|++.||+||++..++. .++.||+++. ...+..+|.
T Consensus 271 GDg~NDl~m~~~AGlgiA~nAkp~--Vk~~Ad~~i~-~~~l~~~l~ 313 (322)
T PRK11133 271 GDGANDLPMIKAAGLGIAYHAKPK--VNEQAQVTIR-HADLMGVLC 313 (322)
T ss_pred ECCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEec-CcCHHHHHH
Confidence 999999999999999999955544 8899999996 444544443
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.68 E-value=7.8e-08 Score=103.89 Aligned_cols=187 Identities=12% Similarity=0.102 Sum_probs=96.3
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc----ccCceEEEEecCCc-------hhhHhhhhccHHHHH
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL----RQEMKQIVITLDSP-------DMEALEKQGDKENIT 588 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~----~~~~~~~~i~~~~~-------~~~~~~~~~~~~~~~ 588 (1000)
..+.+.++|++|+++|++++++|||....+..+.+++|+. ..++..+....... ....++.+...+.++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 4446899999999999999999999999999999999863 33444333322211 111222222222222
Q ss_pred HHHHH-HHHHHH-Hh----------h--hhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhh-cCceEEEcCC
Q 001888 589 KVSLE-SVTKQI-RE----------G--ISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAID-CASVICCRSS 653 (1000)
Q Consensus 589 ~~~~~-~~~~~~-~~----------~--~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~-~~~vi~~r~s 653 (1000)
....+ ...... .. . ...............++. ..+.. ..+...+...... ..+..+..+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~s~~~~ei~ 171 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW-SEERR----ERFTEALVELGLEVTHGNRFYHVL 171 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec-ChHHH----HHHHHHHHHcCCEEEeCCceEEEe
Confidence 11111 000000 00 0 000000000011111122 11111 1122222111000 0000122333
Q ss_pred h--hhHHHHHHHH-hcC-----CCEEEEEcCCccChHHhhhcCccccccCccc--cchhcc--C-cEEecc
Q 001888 654 P--KQKALVTRLV-KGT-----GKTTLAIGDGANDVGMLQEADIGVGISGVEG--MQAVMS--S-DYAIAQ 711 (1000)
Q Consensus 654 p--~qK~~iV~~l-~~~-----~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~--~~ak~~--a-D~vl~~ 711 (1000)
| ..|+..++.+ +.. ...++++||+.||++|++.||+||+|+++.. ...|+. | +++..+
T Consensus 172 ~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~ 242 (256)
T TIGR01486 172 GAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPA 242 (256)
T ss_pred cCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCC
Confidence 3 3588888777 543 4569999999999999999999999988752 236775 4 476543
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.66 E-value=9e-08 Score=98.66 Aligned_cols=125 Identities=20% Similarity=0.167 Sum_probs=89.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.|++.+.|+.+++.| ++.++||-....+..+++.+|+..--...+..+..+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--------------------------
Confidence 57999999999999975 999999999999999999999842111111110000
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
.++|. .. ..+..|..+++.++..+..++++|||.
T Consensus 121 --------------------~~tG~------------------------~~--~~~~~K~~~l~~l~~~~~~~v~vGDs~ 154 (203)
T TIGR02137 121 --------------------RVVGY------------------------QL--RQKDPKRQSVIAFKSLYYRVIAAGDSY 154 (203)
T ss_pred --------------------eeECe------------------------ee--cCcchHHHHHHHHHhhCCCEEEEeCCH
Confidence 11111 11 236689999998876777899999999
Q ss_pred cChHHhhhcCccccccCccccchhccC-cEEec-chhhhHHH
Q 001888 679 NDVGMLQEADIGVGISGVEGMQAVMSS-DYAIA-QFRFLERL 718 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~~g~e~~~ak~~a-D~vl~-~f~~l~~l 718 (1000)
||++|++.||+||++..++. .+++| |+... +...+..+
T Consensus 155 nDl~ml~~Ag~~ia~~ak~~--~~~~~~~~~~~~~~~~~~~~ 194 (203)
T TIGR02137 155 NDTTMLSEAHAGILFHAPEN--VIREFPQFPAVHTYEDLKRE 194 (203)
T ss_pred HHHHHHHhCCCCEEecCCHH--HHHhCCCCCcccCHHHHHHH
Confidence 99999999999999988887 44444 44433 35556555
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.58 E-value=5.8e-08 Score=104.98 Aligned_cols=198 Identities=19% Similarity=0.201 Sum_probs=105.1
Q ss_pred cceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc----ccCceEEEEe-cCCchhhHhhhh
Q 001888 507 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL----RQEMKQIVIT-LDSPDMEALEKQ 581 (1000)
Q Consensus 507 ~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~----~~~~~~~~i~-~~~~~~~~~~~~ 581 (1000)
|.|++.- ..++.+++.++|++++++|++++++|||+...+..+..++++. ..++..+... ++......+..+
T Consensus 7 DGTLl~~---~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~ 83 (256)
T TIGR00099 7 DGTLLND---DHTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLD 83 (256)
T ss_pred CCCCCCC---CCccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHH
Confidence 4555531 2357889999999999999999999999999999999988763 2233333222 111122223333
Q ss_pred ccHHHHHHHHHHHHHHHHHhh----------------hhhhcccc---c------CccceEEEEeccchHHHhhHHHHHH
Q 001888 582 GDKENITKVSLESVTKQIREG----------------ISQVNSAK---E------SKVTFGLVIDGKSLDFALDKKLEKM 636 (1000)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~---~------~~~~~~lvi~g~~l~~~~~~~~~~~ 636 (1000)
...+.++......+...+... ........ . ......+.+....-. .+++...
T Consensus 84 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 160 (256)
T TIGR00099 84 LVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPED---LDLLIEA 160 (256)
T ss_pred HHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHH---HHHHHHH
Confidence 333333222211110000000 00000000 0 000011111111100 0111222
Q ss_pred HHH--HHhhcC----ceEEEcCChh--hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhcc
Q 001888 637 FLD--LAIDCA----SVICCRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMS 704 (1000)
Q Consensus 637 ~~~--~~~~~~----~vi~~r~sp~--qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~ 704 (1000)
+.. ...... ..-+....|. .|+..++.+ +..+ ..++++||+.||++|++.|++|++|.++.. .++..
T Consensus 161 ~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~-~~k~~ 239 (256)
T TIGR00099 161 LNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADE-ELKAL 239 (256)
T ss_pred hhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchH-HHHHh
Confidence 211 000000 0012344554 599999998 5554 569999999999999999999999976544 38899
Q ss_pred CcEEecc
Q 001888 705 SDYAIAQ 711 (1000)
Q Consensus 705 aD~vl~~ 711 (1000)
||+++.+
T Consensus 240 a~~~~~~ 246 (256)
T TIGR00099 240 ADYVTDS 246 (256)
T ss_pred CCEEecC
Confidence 9999865
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.53 E-value=8.2e-06 Score=91.94 Aligned_cols=281 Identities=12% Similarity=0.179 Sum_probs=164.9
Q ss_pred hccceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCch-hhHhhhhcc
Q 001888 505 ERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPD-MEALEKQGD 583 (1000)
Q Consensus 505 E~~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~-~~~~~~~~~ 583 (1000)
-++-.|.|++...-+.+.+....|+.|-++.|+.+..+-++....+-.|.++|+-.....-+.+..++.- ..+.-. ..
T Consensus 812 ~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~p-a~ 890 (1354)
T KOG4383|consen 812 FSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGP-AH 890 (1354)
T ss_pred hccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCC-CC
Confidence 3678899999999999999999999999999999999999999999999999998777666655443210 000000 00
Q ss_pred HHH-HHHHHHHHHHHHHHhhhhh---hcccccCccceEE-EEeccchHHHhhH-----------HHHHHHHHHHhhcC--
Q 001888 584 KEN-ITKVSLESVTKQIREGISQ---VNSAKESKVTFGL-VIDGKSLDFALDK-----------KLEKMFLDLAIDCA-- 645 (1000)
Q Consensus 584 ~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l-vi~g~~l~~~~~~-----------~~~~~~~~~~~~~~-- 645 (1000)
.+. .++....+...++.....+ ++.+........+ -++. ......++ ..+.++.++. ..+
T Consensus 891 ~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~ds-di~kf~ed~N~AkLPrGihnVRPHL~~iD-NVPLL 968 (1354)
T KOG4383|consen 891 EQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDS-DIAKFAEDPNIAKLPRGIHNVRPHLDEID-NVPLL 968 (1354)
T ss_pred hhhhccCcchhHHHHHhhhcccccceeehhhcccCCcccccccc-chhhhcCCCchhhcCcchhhcCccccccc-Cccee
Confidence 000 0000001111111000000 0000000000000 0000 00000000 1111221110 001
Q ss_pred ceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccC--hHHhhhcCccccccCccccc-------------hhccCc----
Q 001888 646 SVICCRSSPKQKALVTRLVKGTGKTTLAIGDGAND--VGMLQEADIGVGISGVEGMQ-------------AVMSSD---- 706 (1000)
Q Consensus 646 ~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND--~~mlk~AdvGIa~~g~e~~~-------------ak~~aD---- 706 (1000)
+-.|.+++|+.-.++++.+|+.|++|++.|..+|- ...+-.|||+|++..-+... ..++.|
T Consensus 969 V~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsp 1048 (1354)
T KOG4383|consen 969 VGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSP 1048 (1354)
T ss_pred eeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCc
Confidence 12588999999999999999999999999999884 44567899999774422110 111222
Q ss_pred EEec--------c--hhh-----hHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCccchhhHHHHHH
Q 001888 707 YAIA--------Q--FRF-----LERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCY 771 (1000)
Q Consensus 707 ~vl~--------~--f~~-----l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~fs~~~~~~~~~ll~~ 771 (1000)
..+. + |++ +.++ ++.+|.....+++.++|.++..+.+..++|+..++. -.++|+-.+++|.
T Consensus 1049 lQiSgqLnaL~c~~~f~~ee~ikiirL-Ie~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~---LP~i~s~sdii~l 1124 (1354)
T KOG4383|consen 1049 LQISGQLNALACDFRFDHEELIKIIRL-IECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFF---LPIIFSHSDIILL 1124 (1354)
T ss_pred eeecccccccccccchhHHHHHHHHHH-HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---ccchhccchHHHH
Confidence 1111 1 222 4555 888999999999999999999999988888876663 2334777777777
Q ss_pred HHHHHHHHHHHHH-hcccCCChhh
Q 001888 772 NVFFTSLPVIALG-VFDQDVSARL 794 (1000)
Q Consensus 772 n~~~~~~p~~~~~-~~~~~~~~~~ 794 (1000)
..+- .|.+++| ++.+..+...
T Consensus 1125 Scfc--~PlL~i~tL~gk~~hkSi 1146 (1354)
T KOG4383|consen 1125 SCFC--IPLLFIGTLFGKFEHKSI 1146 (1354)
T ss_pred HHHH--HHHHHHHHHhcCCCccce
Confidence 6444 6888887 5555444333
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.42 E-value=1e-06 Score=96.15 Aligned_cols=50 Identities=18% Similarity=0.098 Sum_probs=41.9
Q ss_pred cceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 507 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 507 ~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
|.|++.- .+.+.+++.++|+.|++.|++++++||+....+..+.+++|+.
T Consensus 12 DGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 12 DGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred cccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 5566642 2346677999999999999999999999999999999999974
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.40 E-value=5.9e-07 Score=94.52 Aligned_cols=43 Identities=7% Similarity=0.037 Sum_probs=38.2
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
.+..-+++.++|++|+++|++++++|||....+..+..++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3455667999999999999999999999999999999999963
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.36 E-value=9.4e-07 Score=94.98 Aligned_cols=194 Identities=13% Similarity=0.143 Sum_probs=97.9
Q ss_pred cceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhH--hhhhccH
Q 001888 507 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEA--LEKQGDK 584 (1000)
Q Consensus 507 ~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~--~~~~~~~ 584 (1000)
|.||+.---=..+..|.+.+++++++++|++++++|||....+..+.++.++..+. ..+.-+|....... .....-.
T Consensus 9 DGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~~~~~~~~~~ 87 (249)
T TIGR01485 9 DNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGGAEVPDQHWA 87 (249)
T ss_pred CCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCCCCcCCHHHH
Confidence 55666211014567799999999999999999999999999999999988876543 22222222110000 0000000
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccc---ccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceE----EEcCCh--h
Q 001888 585 ENITKVSLESVTKQIREGISQVNSA---KESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI----CCRSSP--K 655 (1000)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi----~~r~sp--~ 655 (1000)
..+..................+... ........+..+........ .++.+.+......+..+. +....| .
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~ 166 (249)
T TIGR01485 88 EYLSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVI-KQLTEMLKETGLDVKLIYSSGKDLDILPQGS 166 (249)
T ss_pred HHHhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHH-HHHHHHHHhcCCCEEEEEECCceEEEEeCCC
Confidence 0000000000000011111111100 01112223332222211111 122333322111121111 113344 3
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhh-cCccccccCccccchhc
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQE-ADIGVGISGVEGMQAVM 703 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~-AdvGIa~~g~e~~~ak~ 703 (1000)
.|...++.+ +..| ..|+++||+.||++|++. ++.||+|.++... ++.
T Consensus 167 ~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~-~k~ 218 (249)
T TIGR01485 167 GKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEE-LLQ 218 (249)
T ss_pred ChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHH-HHH
Confidence 699999888 5544 679999999999999998 6799999776543 443
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.4e-06 Score=91.90 Aligned_cols=122 Identities=22% Similarity=0.302 Sum_probs=85.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++++.++.|+++|+++.++||.....+..+.+.+|+..--...+..+..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--------------------------- 137 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDG--------------------------- 137 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECC---------------------------
Confidence 58999999999999999999999999999999999999884311111111100
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEc-CChhhHHHHHHHH-hcCC---CEEEE
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCR-SSPKQKALVTRLV-KGTG---KTTLA 673 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r-~sp~qK~~iV~~l-~~~~---~~vla 673 (1000)
.++|. +..+ ..+..|..+++.+ +..+ ..+++
T Consensus 138 --------------------~~~~~------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~ 173 (219)
T TIGR00338 138 --------------------KLTGL------------------------VEGPIVDASYKGKTLLILLRKEGISPENTVA 173 (219)
T ss_pred --------------------EEEEE------------------------ecCcccCCcccHHHHHHHHHHcCCCHHHEEE
Confidence 00000 0001 1122355555554 3333 45899
Q ss_pred EcCCccChHHhhhcCccccccCccccchhccCcEEecchh
Q 001888 674 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 713 (1000)
Q Consensus 674 iGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~ 713 (1000)
|||+.+|+.|.+.||++|++.+.+. +..+||+++.+.+
T Consensus 174 iGDs~~Di~aa~~ag~~i~~~~~~~--~~~~a~~~i~~~~ 211 (219)
T TIGR00338 174 VGDGANDLSMIKAAGLGIAFNAKPK--LQQKADICINKKD 211 (219)
T ss_pred EECCHHHHHHHHhCCCeEEeCCCHH--HHHhchhccCCCC
Confidence 9999999999999999999977654 6789999998643
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.7e-06 Score=86.03 Aligned_cols=100 Identities=15% Similarity=0.158 Sum_probs=73.8
Q ss_pred HHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhh
Q 001888 526 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 605 (1000)
Q Consensus 526 e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (1000)
..|+.|+++|+++.++|+.....+....+.+|+..- + ..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~----f--~~----------------------------------- 79 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF----H--EG----------------------------------- 79 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE----E--ec-----------------------------------
Confidence 589999999999999999999999999999998420 0 00
Q ss_pred hcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChHHhh
Q 001888 606 VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQ 685 (1000)
Q Consensus 606 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~mlk 685 (1000)
+ .-.|+--..+++.+.-....+++|||+.||++|++
T Consensus 80 ------------------------------------------~--kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~ 115 (169)
T TIGR02726 80 ------------------------------------------I--KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMK 115 (169)
T ss_pred ------------------------------------------C--CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHH
Confidence 0 01122222223333222356999999999999999
Q ss_pred hcCccccccCccccchhccCcEEecc
Q 001888 686 EADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 686 ~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
.|+++++|.++... ++..|+++...
T Consensus 116 ~ag~~~am~nA~~~-lk~~A~~I~~~ 140 (169)
T TIGR02726 116 RVGLAVAVGDAVAD-VKEAAAYVTTA 140 (169)
T ss_pred HCCCeEECcCchHH-HHHhCCEEcCC
Confidence 99999999876644 88999998763
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.8e-06 Score=83.81 Aligned_cols=95 Identities=17% Similarity=0.246 Sum_probs=71.3
Q ss_pred HHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhh
Q 001888 527 CIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQV 606 (1000)
Q Consensus 527 ~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (1000)
+|+.|++.|+++.++||+....+..+.+..|+..- +
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------~-------------------------------------- 71 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------Y-------------------------------------- 71 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------E--------------------------------------
Confidence 89999999999999999999999999999887320 0
Q ss_pred cccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hc---CCCEEEEEcCCccChH
Q 001888 607 NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KG---TGKTTLAIGDGANDVG 682 (1000)
Q Consensus 607 ~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~---~~~~vlaiGDG~ND~~ 682 (1000)
++ ...|...+..+ +. ....++++||+.||++
T Consensus 72 --------------~~-------------------------------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~ 106 (154)
T TIGR01670 72 --------------QG-------------------------------QSNKLIAFSDILEKLALAPENVAYIGDDLIDWP 106 (154)
T ss_pred --------------ec-------------------------------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 00 01122222222 22 2356999999999999
Q ss_pred HhhhcCccccccCccccchhccCcEEecc
Q 001888 683 MLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 683 mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
|++.|++++++.+.... .+..||+++..
T Consensus 107 ~~~~ag~~~~v~~~~~~-~~~~a~~i~~~ 134 (154)
T TIGR01670 107 VMEKVGLSVAVADAHPL-LIPRADYVTRI 134 (154)
T ss_pred HHHHCCCeEecCCcCHH-HHHhCCEEecC
Confidence 99999999999766443 78889999864
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.7e-06 Score=89.70 Aligned_cols=37 Identities=22% Similarity=0.227 Sum_probs=34.7
Q ss_pred CcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 523 GVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 523 ~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
.+.++|+.|+++||+++++||++...+..+.+.+++.
T Consensus 20 ~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 20 PAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3899999999999999999999999999999999974
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.9e-06 Score=91.94 Aligned_cols=54 Identities=26% Similarity=0.294 Sum_probs=44.7
Q ss_pred CChh--hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCc
Q 001888 652 SSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD 706 (1000)
Q Consensus 652 ~sp~--qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD 706 (1000)
..|. .|...++.+ ++.| ..++++||+.||++|++.|++||+|+++... ++..||
T Consensus 153 i~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~-~k~~a~ 212 (236)
T TIGR02471 153 VLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPE-LEGLRH 212 (236)
T ss_pred EeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHH-HHHhhc
Confidence 4443 699999998 6555 3589999999999999999999999776554 888899
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.2e-05 Score=86.97 Aligned_cols=182 Identities=10% Similarity=0.092 Sum_probs=94.8
Q ss_pred cccCCcHHHHHHHHH-cCCeEEEEcCCchhhHHHHHHHcCc--cccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQ-AGIKVWVLTGDKMETAINIGYACSL--LRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESV 595 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~-aGIkv~mlTGD~~~ta~~ia~~~gl--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1000)
.+-+++.++|+.|++ .|++++++|||....+..+...+++ +..++..+...........+.. +. ...+
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~----~~-----~~~i 106 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPD----AI-----ARDI 106 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCCh----hH-----HHHH
Confidence 455789999999998 7999999999999999888776653 3333322221111100011111 11 1111
Q ss_pred HHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCce------EEEcCCh--hhHHHHHHHH-hc
Q 001888 596 TKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASV------ICCRSSP--KQKALVTRLV-KG 666 (1000)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~v------i~~r~sp--~qK~~iV~~l-~~ 666 (1000)
...+...........-......++........ ..+........+....... -+..+.| ..|+..++.+ +.
T Consensus 107 ~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~-~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~ 185 (266)
T PRK10187 107 SVQLHTALAQLPGAELEAKGMAFALHYRQAPQ-HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQE 185 (266)
T ss_pred HHHHHHHhccCCCcEEEeCCcEEEEECCCCCc-cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHh
Confidence 11111111000000001111222222221110 0111111111222122111 2233344 4799999887 65
Q ss_pred CC---CEEEEEcCCccChHHhhhc----CccccccCccccchhccCcEEecchhhh
Q 001888 667 TG---KTTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDYAIAQFRFL 715 (1000)
Q Consensus 667 ~~---~~vlaiGDG~ND~~mlk~A----dvGIa~~g~e~~~ak~~aD~vl~~f~~l 715 (1000)
.| ..++++||+.||.+|++.+ +.||+|+++. ..|++.+.+-..+
T Consensus 186 ~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~-----~~A~~~l~~~~~v 236 (266)
T PRK10187 186 APFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTGA-----TQASWRLAGVPDV 236 (266)
T ss_pred cCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCCC-----CcCeEeCCCHHHH
Confidence 54 6799999999999999999 8999996543 4588888874433
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=4.4e-06 Score=84.95 Aligned_cols=110 Identities=19% Similarity=0.210 Sum_probs=78.7
Q ss_pred HHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhh
Q 001888 526 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 605 (1000)
Q Consensus 526 e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (1000)
.+|+.|+++|+++.++||+....+..+++++|+..- +.+
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------f~g----------------------------------- 93 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------YQG----------------------------------- 93 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------ecC-----------------------------------
Confidence 699999999999999999999999999999987320 000
Q ss_pred hcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCC---CEEEEEcCCccCh
Q 001888 606 VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDV 681 (1000)
Q Consensus 606 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~---~~vlaiGDG~ND~ 681 (1000)
.+.|...++.+ +..| ..|++|||+.||+
T Consensus 94 ------------------------------------------------~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~ 125 (183)
T PRK09484 94 ------------------------------------------------QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDW 125 (183)
T ss_pred ------------------------------------------------CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 11233333333 3333 4699999999999
Q ss_pred HHhhhcCccccccCccccchhccCcEEecc------hhhhHHHH-HHhhhh
Q 001888 682 GMLQEADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLL-LVHGHW 725 (1000)
Q Consensus 682 ~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~------f~~l~~ll-l~~gR~ 725 (1000)
+|++.|++++++...+. ..+..||+++.. .+.+..++ ...|+|
T Consensus 126 ~~a~~aG~~~~v~~~~~-~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~ 175 (183)
T PRK09484 126 PVMEKVGLSVAVADAHP-LLLPRADYVTRIAGGRGAVREVCDLLLLAQGKL 175 (183)
T ss_pred HHHHHCCCeEecCChhH-HHHHhCCEEecCCCCCCHHHHHHHHHHHhcCCh
Confidence 99999999998754433 367789999862 45555553 345544
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.1e-05 Score=84.03 Aligned_cols=126 Identities=21% Similarity=0.227 Sum_probs=87.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.||++++++.|+++ +++.++||.....+..+...+|+..--...+....+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------------------------- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------------------
Confidence 4679999999999999 9999999999999999999998742111111110000
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEc-CChhhHHHHHHHHhcCCCEEEEEcCC
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCR-SSPKQKALVTRLVKGTGKTTLAIGDG 677 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r-~sp~qK~~iV~~l~~~~~~vlaiGDG 677 (1000)
.+ +... ..|..|...++.++..+..+++||||
T Consensus 121 --------------------~i---------------------------~~~~~~~p~~k~~~l~~~~~~~~~~v~iGDs 153 (205)
T PRK13582 121 --------------------MI---------------------------TGYDLRQPDGKRQAVKALKSLGYRVIAAGDS 153 (205)
T ss_pred --------------------eE---------------------------ECccccccchHHHHHHHHHHhCCeEEEEeCC
Confidence 00 0001 12567777778776667889999999
Q ss_pred ccChHHhhhcCccccccCccccchhccCcE-EecchhhhHHHH
Q 001888 678 ANDVGMLQEADIGVGISGVEGMQAVMSSDY-AIAQFRFLERLL 719 (1000)
Q Consensus 678 ~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~-vl~~f~~l~~ll 719 (1000)
.||++|.+.|++|+.....+.. ....+++ ++.++..+..++
T Consensus 154 ~~D~~~~~aa~~~v~~~~~~~~-~~~~~~~~~~~~~~el~~~l 195 (205)
T PRK13582 154 YNDTTMLGEADAGILFRPPANV-IAEFPQFPAVHTYDELLAAI 195 (205)
T ss_pred HHHHHHHHhCCCCEEECCCHHH-HHhCCcccccCCHHHHHHHH
Confidence 9999999999999976554432 2234555 777777665553
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.1e-05 Score=95.02 Aligned_cols=39 Identities=5% Similarity=-0.019 Sum_probs=35.5
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
.-+.+.++|+.|+++||+++++|||....+..+++++++
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 345679999999999999999999999999999999985
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.3e-05 Score=83.28 Aligned_cols=171 Identities=18% Similarity=0.231 Sum_probs=86.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcC--ccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACS--LLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 596 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~g--l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1000)
++.+.+.++|++|++.|++++++|||....+..+.+.++ ++..++..+...+...... ..+...+.+... +.+.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~--~~~~~~~~~~~~--~~~~ 92 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIE--PSDVFEEILGIK--EEIG 92 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEc--ccccHHHHHHhh--hhcC
Confidence 477889999999999999999999999999999888743 4444554444322211000 000001111100 0100
Q ss_pred HHHHhhhhhhccc--ccCccceEEEEeccchHHHhhHHHHHHHHHHHhh-cCceE------EEcCCh--hhHHHHHHHH-
Q 001888 597 KQIREGISQVNSA--KESKVTFGLVIDGKSLDFALDKKLEKMFLDLAID-CASVI------CCRSSP--KQKALVTRLV- 664 (1000)
Q Consensus 597 ~~~~~~~~~~~~~--~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~-~~~vi------~~r~sp--~qK~~iV~~l- 664 (1000)
..+.......... ........+...+..............+...... ....+ +..+.| ..|...++.+
T Consensus 93 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~ 172 (204)
T TIGR01484 93 AELKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALL 172 (204)
T ss_pred ceeeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHH
Confidence 0000000000000 0011112222222101111111222222221100 00111 223344 5799999988
Q ss_pred hcCC---CEEEEEcCCccChHHhhhcCccccc
Q 001888 665 KGTG---KTTLAIGDGANDVGMLQEADIGVGI 693 (1000)
Q Consensus 665 ~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~ 693 (1000)
+..+ ..++++||+.||.+|++.|++||+|
T Consensus 173 ~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 173 KELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred HHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 5554 5699999999999999999999987
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.08 E-value=9.4e-06 Score=86.01 Aligned_cols=42 Identities=7% Similarity=-0.030 Sum_probs=37.8
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
+..-+.+.++|++|+++||.++++||+.......+.+++++-
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 345667999999999999999999999999999999999973
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.1e-05 Score=92.54 Aligned_cols=177 Identities=16% Similarity=0.127 Sum_probs=89.7
Q ss_pred cHHHH-HHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchh-hHhhhhc-cHHHHHHHHHHH-HHHHH
Q 001888 524 VPECI-DKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDM-EALEKQG-DKENITKVSLES-VTKQI 599 (1000)
Q Consensus 524 v~e~I-~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~-~~~~~~~-~~~~~~~~~~~~-~~~~~ 599 (1000)
..+++ +++++.|+.++++|||.+..+..+.++.++..+... +.-+|..... ..+..+. -...+....... +...+
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~-I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~ 111 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDIT-IMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEET 111 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEE-EEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHH
Confidence 44455 888999999999999999999999999998766421 1112221100 0000000 000011000000 11111
Q ss_pred Hhhhhhhc--ccc-cCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCc----eEEEcCChh--hHHHHHHHH-hcC--
Q 001888 600 REGISQVN--SAK-ESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCAS----VICCRSSPK--QKALVTRLV-KGT-- 667 (1000)
Q Consensus 600 ~~~~~~~~--~~~-~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~----vi~~r~sp~--qK~~iV~~l-~~~-- 667 (1000)
... ..+. ... ....+..+..+......+ .+.+.+.+......+.. --+..+.|. .|+..++.+ +..
T Consensus 112 ~~~-~~l~~q~~~~~~~~Ki~~~~~~~~~~~~-~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~ 189 (413)
T PLN02382 112 SKF-PELKLQPETEQRPHKVSFYVDKKKAQEV-IKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKA 189 (413)
T ss_pred hcC-CCcccCCcccCCCeEEEEEechHHhHHH-HHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhh
Confidence 000 0010 011 111222333332222211 12333333221111111 113345554 599999998 554
Q ss_pred -C---CEEEEEcCCccChHHhhhcC-ccccccCccccchhcc
Q 001888 668 -G---KTTLAIGDGANDVGMLQEAD-IGVGISGVEGMQAVMS 704 (1000)
Q Consensus 668 -~---~~vlaiGDG~ND~~mlk~Ad-vGIa~~g~e~~~ak~~ 704 (1000)
| ..|+++||+.||++||+.|+ .||+|+|+... .++.
T Consensus 190 ~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~e-lk~~ 230 (413)
T PLN02382 190 EGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEE-LLQW 230 (413)
T ss_pred cCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHH-HHHH
Confidence 3 57999999999999999999 69999776544 5543
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.07 E-value=5.7e-06 Score=80.13 Aligned_cols=128 Identities=20% Similarity=0.288 Sum_probs=85.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceE--EEEecCCchhhHhhhhccHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQ--IVITLDSPDMEALEKQGDKENITKVSLESVT 596 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1000)
.+-+|++|..+.|++.|.++.++||--..-+..+|.++||...+..- +.++..+.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk----------------------- 144 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK----------------------- 144 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc-----------------------
Confidence 36799999999999999999999999999999999999996543211 11111100
Q ss_pred HHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhc--CCCEEEEE
Q 001888 597 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG--TGKTTLAI 674 (1000)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~--~~~~vlai 674 (1000)
...++.. -.-+...-|+.++..+++ ..+.++||
T Consensus 145 ----------------------~~gfd~~-----------------------~ptsdsggKa~~i~~lrk~~~~~~~~mv 179 (227)
T KOG1615|consen 145 ----------------------YLGFDTN-----------------------EPTSDSGGKAEVIALLRKNYNYKTIVMV 179 (227)
T ss_pred ----------------------ccccccC-----------------------CccccCCccHHHHHHHHhCCChheeEEe
Confidence 0000000 001113368999998833 34789999
Q ss_pred cCCccChHHhhhcCccccccCcccc-chhccCcEEecchhh
Q 001888 675 GDGANDVGMLQEADIGVGISGVEGM-QAVMSSDYAIAQFRF 714 (1000)
Q Consensus 675 GDG~ND~~mlk~AdvGIa~~g~e~~-~ak~~aD~vl~~f~~ 714 (1000)
|||+||.+|+..|+.=||..|.... +++..|+.-+.+|..
T Consensus 180 GDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~~~f~~ 220 (227)
T KOG1615|consen 180 GDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYVTDFYV 220 (227)
T ss_pred cCCccccccCCchhhhhccCCceEcHhhHhccHHHHHHHHH
Confidence 9999999999998877766543221 245556655555443
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=9e-06 Score=87.16 Aligned_cols=36 Identities=17% Similarity=0.223 Sum_probs=31.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGY 554 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~ 554 (1000)
++.+.+.++|++++++||+++++|||+.........
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 478889999999999999999999999987765543
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.6e-05 Score=82.46 Aligned_cols=117 Identities=20% Similarity=0.237 Sum_probs=78.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++++++.++++.|++.|+++.++||.....+..+++.+|+..--...+..+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g-------------------------- 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKG-------------------------- 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCC--------------------------
Confidence 589999999999999999999999999999999999998632111111111000
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCC---CEEEEE
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 674 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~---~~vlai 674 (1000)
...+ . .+....|..|..+++.+ +..+ ..+++|
T Consensus 134 --------------------~~~p----------------------~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~i 169 (201)
T TIGR01491 134 --------------------FIQP----------------------D--GIVRVTFDNKGEAVERLKRELNPSLTETVAV 169 (201)
T ss_pred --------------------eEec----------------------c--eeeEEccccHHHHHHHHHHHhCCCHHHEEEE
Confidence 0000 0 11122345676666665 4333 469999
Q ss_pred cCCccChHHhhhcCccccccCccccchhccCc
Q 001888 675 GDGANDVGMLQEADIGVGISGVEGMQAVMSSD 706 (1000)
Q Consensus 675 GDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD 706 (1000)
||+.||++|++.||+++++.+... ..+.++|
T Consensus 170 GDs~~D~~~a~~ag~~~a~~~~~~-~~~~a~~ 200 (201)
T TIGR01491 170 GDSKNDLPMFEVADISISLGDEGH-ADYLAKD 200 (201)
T ss_pred cCCHhHHHHHHhcCCeEEECCCcc-chhhccc
Confidence 999999999999999999854332 1444444
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.1e-05 Score=80.86 Aligned_cols=40 Identities=25% Similarity=0.260 Sum_probs=36.2
Q ss_pred CCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcccc
Q 001888 522 KGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQ 561 (1000)
Q Consensus 522 ~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~ 561 (1000)
+++++.|+.++++|++++++||.....+..+++.+|+...
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~ 131 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDD 131 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEG
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce
Confidence 5555999999999999999999999999999999998653
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.9e-05 Score=74.17 Aligned_cols=110 Identities=16% Similarity=0.217 Sum_probs=80.7
Q ss_pred HHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhh
Q 001888 526 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 605 (1000)
Q Consensus 526 e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (1000)
..|+.++++||++-++||++......=|+++|+-. .+.+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~------~~qG----------------------------------- 80 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH------LYQG----------------------------------- 80 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce------eeec-----------------------------------
Confidence 47999999999999999999999999999999831 0000
Q ss_pred hcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCC---CEEEEEcCCccCh
Q 001888 606 VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDV 681 (1000)
Q Consensus 606 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~---~~vlaiGDG~ND~ 681 (1000)
..+|....+.+ ++.+ ..|+++||-.||.
T Consensus 81 ------------------------------------------------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dl 112 (170)
T COG1778 81 ------------------------------------------------ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDL 112 (170)
T ss_pred ------------------------------------------------hHhHHHHHHHHHHHhCCCHHHhhhhcCccccH
Confidence 12344444444 3333 4589999999999
Q ss_pred HHhhhcCccccccCccccchhccCcEEecc------hhhhHHHHHHhhhhh
Q 001888 682 GMLQEADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLLLVHGHWC 726 (1000)
Q Consensus 682 ~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~------f~~l~~lll~~gR~~ 726 (1000)
|+|+..+++++..++... .++.||+|+.. ++....+ +..++..
T Consensus 113 pvm~~vGls~a~~dAh~~-v~~~a~~Vt~~~GG~GAvREv~dl-il~aq~~ 161 (170)
T COG1778 113 PVMEKVGLSVAVADAHPL-LKQRADYVTSKKGGEGAVREVCDL-ILQAQGK 161 (170)
T ss_pred HHHHHcCCcccccccCHH-HHHhhHhhhhccCcchHHHHHHHH-HHHccCc
Confidence 999999999998766554 78889999874 5556666 3444433
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.0011 Score=77.33 Aligned_cols=41 Identities=17% Similarity=0.154 Sum_probs=38.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
|+++++.+.+++++++|++++++|+-....+..+++..|+.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlF 112 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLF 112 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 47899999999999999999999999999999999999973
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.87 E-value=5.7e-05 Score=79.12 Aligned_cols=138 Identities=12% Similarity=0.146 Sum_probs=84.8
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
-+++|++.+.++.|++.|+++.++||.....+..+...++... .++. +.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~~---n~------------------------- 117 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIYC---NE------------------------- 117 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEEe---ce-------------------------
Confidence 4799999999999999999999999999988888887764321 1110 00
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceE-EE-cCChhhHHHHHHHHhcCCCEEEEEc
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI-CC-RSSPKQKALVTRLVKGTGKTTLAIG 675 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi-~~-r~sp~qK~~iV~~l~~~~~~vlaiG 675 (1000)
+.++|..+.... + .+... +. .+ ...|..+++.++.....+++||
T Consensus 118 --------------------~~~~~~~~~~~~-p------------~~~~~~~~~~c-g~~K~~~l~~~~~~~~~~i~iG 163 (214)
T TIGR03333 118 --------------------ADFSNEYIHIDW-P------------HPCDGTCQNQC-GCCKPSLIRKLSEPNDYHIVIG 163 (214)
T ss_pred --------------------eEeeCCeeEEeC-C------------CCCccccccCC-CCCHHHHHHHHhhcCCcEEEEe
Confidence 001111000000 0 00000 00 11 3468888988865667789999
Q ss_pred CCccChHHhhhcCccccccCc-cccchhccCcEEecchhhhHHHHH
Q 001888 676 DGANDVGMLQEADIGVGISGV-EGMQAVMSSDYAIAQFRFLERLLL 720 (1000)
Q Consensus 676 DG~ND~~mlk~AdvGIa~~g~-e~~~ak~~aD~vl~~f~~l~~lll 720 (1000)
||.||+.|.+.||++++-..- +-.+-...+.+...+|..+.+.|-
T Consensus 164 Dg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 164 DSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred CCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 999999999999998764211 111112234555566777766643
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=97.84 E-value=7.6e-05 Score=78.85 Aligned_cols=41 Identities=22% Similarity=0.444 Sum_probs=38.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.|++.++++.|++.|+++.++||.....+..++..+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999999984
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0001 Score=76.45 Aligned_cols=111 Identities=12% Similarity=0.041 Sum_probs=76.5
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHH
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 596 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1000)
..++.+++.+.|+.+++.|++++++||.....+..+++.+|+..--...+....++
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g------------------------ 140 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG------------------------ 140 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC------------------------
Confidence 45689999999999999999999999999999999999999842100000000000
Q ss_pred HHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCC---CEEE
Q 001888 597 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTL 672 (1000)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~---~~vl 672 (1000)
..+|+.. .-.+.++.|...++.+ +..+ ..++
T Consensus 141 ----------------------~~~g~~~-----------------------~~~~~g~~K~~~l~~~~~~~~~~~~~~~ 175 (202)
T TIGR01490 141 ----------------------IYTGNID-----------------------GNNCKGEGKVHALAELLAEEQIDLKDSY 175 (202)
T ss_pred ----------------------EEeCCcc-----------------------CCCCCChHHHHHHHHHHHHcCCCHHHcE
Confidence 1111110 0112356677766665 4444 3689
Q ss_pred EEcCCccChHHhhhcCccccccCc
Q 001888 673 AIGDGANDVGMLQEADIGVGISGV 696 (1000)
Q Consensus 673 aiGDG~ND~~mlk~AdvGIa~~g~ 696 (1000)
++||+.+|++|++.||.++.+...
T Consensus 176 ~~gDs~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 176 AYGDSISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred eeeCCcccHHHHHhCCCcEEeCCC
Confidence 999999999999999999987543
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0002 Score=75.34 Aligned_cols=136 Identities=13% Similarity=0.131 Sum_probs=82.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
+++||+.+.++.|++.|+++.++||-....+..+.+.. +.. ..++..+.
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~---------------------------- 122 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGS---------------------------- 122 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEE----------------------------
Confidence 68999999999999999999999999998888888877 532 11111000
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEE--cCChhhHHHHHHHHhcCCCEEEEEcC
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICC--RSSPKQKALVTRLVKGTGKTTLAIGD 676 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~--r~sp~qK~~iV~~l~~~~~~vlaiGD 676 (1000)
.++|..+... .+. +...-+ ++ ...|..+++.++.....+++|||
T Consensus 123 --------------------~~~~~~~~~~-kp~------------p~~~~~~~~~-~~~K~~~l~~~~~~~~~~i~iGD 168 (219)
T PRK09552 123 --------------------DFSGEYITIT-WPH------------PCDEHCQNHC-GCCKPSLIRKLSDTNDFHIVIGD 168 (219)
T ss_pred --------------------EecCCeeEEe-ccC------------CccccccccC-CCchHHHHHHhccCCCCEEEEeC
Confidence 0011100000 000 000000 01 12377788877555568999999
Q ss_pred CccChHHhhhcCccccccC-ccccchhccCcEEecchhhhHHHH
Q 001888 677 GANDVGMLQEADIGVGISG-VEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 677 G~ND~~mlk~AdvGIa~~g-~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
|.||+.|.+.||+.++... .+.......+.+.+.+|..+...|
T Consensus 169 s~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~~~f~ei~~~l 212 (219)
T PRK09552 169 SITDLEAAKQADKVFARDFLITKCEELGIPYTPFETFHDVQTEL 212 (219)
T ss_pred CHHHHHHHHHCCcceeHHHHHHHHHHcCCCccccCCHHHHHHHH
Confidence 9999999999999776321 011011233566666777766553
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00013 Score=69.79 Aligned_cols=44 Identities=25% Similarity=0.279 Sum_probs=40.2
Q ss_pred ecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 516 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 516 i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
-..++.+++++.++.|++.|++++++||+....+......+|+.
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 34588999999999999999999999999999999999998874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00018 Score=72.75 Aligned_cols=40 Identities=20% Similarity=0.189 Sum_probs=37.5
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
+++++.+.++.+++.|++++++||.....+..++...|+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 6799999999999999999999999999999999998874
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0004 Score=73.44 Aligned_cols=125 Identities=25% Similarity=0.224 Sum_probs=81.8
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
-++.|++.+.++.|++.|++++++||.....+..+.+..|+...-.. .+..+
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~~~~-------------------------- 143 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSV--VIGGD-------------------------- 143 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccE--EEcCC--------------------------
Confidence 46889999999999999999999999999999899888887432110 00000
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCC
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 677 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG 677 (1000)
.. -.....|+--..+++.+......+++|||+
T Consensus 144 --------------------------~~----------------------~~~kp~~~~~~~~~~~~~~~~~~~i~igD~ 175 (226)
T PRK13222 144 --------------------------SL----------------------PNKKPDPAPLLLACEKLGLDPEEMLFVGDS 175 (226)
T ss_pred --------------------------CC----------------------CCCCcChHHHHHHHHHcCCChhheEEECCC
Confidence 00 000011221222333333334679999999
Q ss_pred ccChHHhhhcCc-cccccC-cc--ccchhccCcEEecchhhhHHH
Q 001888 678 ANDVGMLQEADI-GVGISG-VE--GMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 678 ~ND~~mlk~Adv-GIa~~g-~e--~~~ak~~aD~vl~~f~~l~~l 718 (1000)
.+|+.|.+.||+ +|++.. .. .......+|+++.++..+...
T Consensus 176 ~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 220 (226)
T PRK13222 176 RNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPL 220 (226)
T ss_pred HHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHH
Confidence 999999999999 455431 11 111245689999988887766
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0013 Score=81.73 Aligned_cols=224 Identities=14% Similarity=0.093 Sum_probs=112.0
Q ss_pred cCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeec--ccccCCcHHHHHHHHH-cCCeEEEEcCCch
Q 001888 470 LGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVE--DKLQKGVPECIDKLAQ-AGIKVWVLTGDKM 546 (1000)
Q Consensus 470 l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~--D~lr~~v~e~I~~l~~-aGIkv~mlTGD~~ 546 (1000)
++..+.+...+.|..++..+ --+.-|.|++....-. ..+.+++.++|++|.+ .|+.|+++|||..
T Consensus 475 ~~~~~~~~~~~~y~~~~~rL------------i~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~ 542 (726)
T PRK14501 475 ITPAAAEEIIARYRAASRRL------------LLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDR 542 (726)
T ss_pred CCccCHHHHHHHHHhccceE------------EEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCH
Confidence 44445566667776654332 0112355666532111 1356788999999999 6999999999999
Q ss_pred hhHHHHHHHcC--ccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhhcccccCccceEEEEecc-
Q 001888 547 ETAINIGYACS--LLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGK- 623 (1000)
Q Consensus 547 ~ta~~ia~~~g--l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~- 623 (1000)
..........+ ++..++..+...+..-.........-.+.+.. +...+.. .............+...-.
T Consensus 543 ~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~-----il~~~~~---~~~gs~ie~k~~~l~~~~r~ 614 (726)
T PRK14501 543 DTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRP-----ILEEFVD---RTPGSFIEEKEASLAWHYRN 614 (726)
T ss_pred HHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHH-----HHHHHHh---cCCCcEEEEcceEEEEEccC
Confidence 98877665444 34444444332221100000000000011111 1111110 0000000111122333211
Q ss_pred ---chHHHhhHHHHHHHHHHHhhcCceE-----EEcCCh--hhHHHHHHHH-hcC-CCEEEEEcCCccChHHhhhc---C
Q 001888 624 ---SLDFALDKKLEKMFLDLAIDCASVI-----CCRSSP--KQKALVTRLV-KGT-GKTTLAIGDGANDVGMLQEA---D 688 (1000)
Q Consensus 624 ---~l~~~~~~~~~~~~~~~~~~~~~vi-----~~r~sp--~qK~~iV~~l-~~~-~~~vlaiGDG~ND~~mlk~A---d 688 (1000)
.+.....+++...+..........+ +..+.| ..|+..++.+ +.. -..++++||+.||.+|++.+ +
T Consensus 615 ~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~ 694 (726)
T PRK14501 615 ADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETA 694 (726)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCc
Confidence 1111111233334433322211111 123334 4799999998 432 36899999999999999997 5
Q ss_pred ccccccCccccchhccCcEEecchhhhHHH
Q 001888 689 IGVGISGVEGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 689 vGIa~~g~e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
.+|+|++ ++.+|++.+.+-..+..+
T Consensus 695 ~~v~vG~-----~~s~A~~~l~~~~eV~~~ 719 (726)
T PRK14501 695 ITVKVGP-----GESRARYRLPSQREVREL 719 (726)
T ss_pred eEEEECC-----CCCcceEeCCCHHHHHHH
Confidence 6677744 346799999875544433
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00043 Score=71.98 Aligned_cols=124 Identities=21% Similarity=0.234 Sum_probs=81.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.++++.|+++|+++.++||.....+..+....|+...-..+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i--------------------------------- 121 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHV--------------------------------- 121 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeE---------------------------------
Confidence 68899999999999999999999999988888888888874311110
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
+.+.. +..++-.|+--..+++.+.-....+++|||+.
T Consensus 122 ---------------------~~~~~----------------------~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~ 158 (205)
T TIGR01454 122 ---------------------IGSDE----------------------VPRPKPAPDIVREALRLLDVPPEDAVMVGDAV 158 (205)
T ss_pred ---------------------EecCc----------------------CCCCCCChHHHHHHHHHcCCChhheEEEcCCH
Confidence 00000 00011122222233333333346799999999
Q ss_pred cChHHhhhcCccc-ccc---CccccchhccCcEEecchhhhHHH
Q 001888 679 NDVGMLQEADIGV-GIS---GVEGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 679 ND~~mlk~AdvGI-a~~---g~e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
+|+.+-+.||+.. ++. +.........+|+++.++..+..+
T Consensus 159 ~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~ 202 (205)
T TIGR01454 159 TDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLAL 202 (205)
T ss_pred HHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHH
Confidence 9999999999975 332 122122456799999888776544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00038 Score=71.20 Aligned_cols=42 Identities=14% Similarity=0.075 Sum_probs=38.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK 112 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh
Confidence 478999999999999999999999999999999988888874
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00085 Score=70.58 Aligned_cols=126 Identities=22% Similarity=0.144 Sum_probs=86.6
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHH
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 596 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1000)
+.++-+++++++..|+++|++..++|++....+..+.+..|+...-..++. +.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g--~~------------------------- 139 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG--GD------------------------- 139 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc--CC-------------------------
Confidence 557889999999999999999999999999999999999998543211111 00
Q ss_pred HHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcC
Q 001888 597 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGD 676 (1000)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGD 676 (1000)
. .-...-.|.....+.+.+......++||||
T Consensus 140 ---------------------------~----------------------~~~~KP~P~~l~~~~~~~~~~~~~~l~VGD 170 (220)
T COG0546 140 ---------------------------D----------------------VPPPKPDPEPLLLLLEKLGLDPEEALMVGD 170 (220)
T ss_pred ---------------------------C----------------------CCCCCcCHHHHHHHHHHhCCChhheEEECC
Confidence 0 001112344444555555323357999999
Q ss_pred CccChHHhhhcCcc---ccccCc-cccchhccCcEEecchhhhHHH
Q 001888 677 GANDVGMLQEADIG---VGISGV-EGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 677 G~ND~~mlk~AdvG---Ia~~g~-e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
..+|+.|=+.|++. |.-+.. ...-....+|+++.+...|...
T Consensus 171 s~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~ 216 (220)
T COG0546 171 SLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLAL 216 (220)
T ss_pred CHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHH
Confidence 99999999999944 432221 2222456699999998877655
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0011 Score=69.40 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=37.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+++.++++.|+++|+++.++|+.....+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 57899999999999999999999999998898888888874
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00071 Score=72.27 Aligned_cols=48 Identities=19% Similarity=0.341 Sum_probs=38.3
Q ss_pred EcCChh--hHHHHHHHHhcCCCEEEEEcC----CccChHHhhh-cCccccccCccc
Q 001888 650 CRSSPK--QKALVTRLVKGTGKTTLAIGD----GANDVGMLQE-ADIGVGISGVEG 698 (1000)
Q Consensus 650 ~r~sp~--qK~~iV~~l~~~~~~vlaiGD----G~ND~~mlk~-AdvGIa~~g~e~ 698 (1000)
..+.|. .|+..++.++ ....|+|+|| |.||.+||+. .=+|+.+++-+.
T Consensus 181 iDi~~~gvnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 181 FDVFPQGWDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred EEEeeCCCCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 344443 6999999999 6788999999 8999999997 666778776554
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0012 Score=71.69 Aligned_cols=41 Identities=12% Similarity=0.182 Sum_probs=36.6
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
.++.+++.++++.|+++|+++.++||.....+..+....|+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 46889999999999999999999999988888877777776
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.002 Score=68.21 Aligned_cols=124 Identities=17% Similarity=0.148 Sum_probs=80.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.||+.+.++.|++.|+++.++|+.....+..+-+..|+...-. .
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~--~-------------------------------- 140 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCA--V-------------------------------- 140 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhccc--E--------------------------------
Confidence 578999999999999999999999998887777777777632110 0
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
++.+... -...-.|+-=..+++.+.-....+++|||+.
T Consensus 141 --------------------i~~~~~~----------------------~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~ 178 (229)
T PRK13226 141 --------------------LIGGDTL----------------------AERKPHPLPLLVAAERIGVAPTDCVYVGDDE 178 (229)
T ss_pred --------------------EEecCcC----------------------CCCCCCHHHHHHHHHHhCCChhhEEEeCCCH
Confidence 1111000 0011123222333444433346799999999
Q ss_pred cChHHhhhcCccc-ccc-Cc---cccchhccCcEEecchhhhHHH
Q 001888 679 NDVGMLQEADIGV-GIS-GV---EGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 679 ND~~mlk~AdvGI-a~~-g~---e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
+|+.|-+.||+.. ++. |. +.......+|+++.++..+...
T Consensus 179 ~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~ 223 (229)
T PRK13226 179 RDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNP 223 (229)
T ss_pred HHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHH
Confidence 9999999999975 442 21 1111234699999998877665
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0049 Score=65.91 Aligned_cols=65 Identities=9% Similarity=0.067 Sum_probs=48.5
Q ss_pred cCChhhHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhc--------CccccccCccccchhccCcEEecchhhhHHH
Q 001888 651 RSSPKQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEA--------DIGVGISGVEGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 651 r~sp~qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~A--------dvGIa~~g~e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
+..+.+|+..++.+ +..+ ..++++||+.||..|++.+ +.||.|...+ .+..|++++.+...+...
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~---~~~~A~~~~~~~~~v~~~ 238 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS---KKTVAKFHLTGPQQVLEF 238 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC---cCCCceEeCCCHHHHHHH
Confidence 34456799988888 5544 5799999999999999999 4666664111 466799999987766555
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0025 Score=66.72 Aligned_cols=41 Identities=20% Similarity=0.052 Sum_probs=37.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+|+.++++.|+++|+++.++||.....+..+....|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 37799999999999999999999999998888888888874
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.018 Score=64.50 Aligned_cols=61 Identities=16% Similarity=0.226 Sum_probs=45.4
Q ss_pred hhHHHHHHHH-hcCC-----C-EEEEEcCCccChHHhhh-----cCccccccCccccchhccCcEEecchhhhHHH
Q 001888 655 KQKALVTRLV-KGTG-----K-TTLAIGDGANDVGMLQE-----ADIGVGISGVEGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 655 ~qK~~iV~~l-~~~~-----~-~vlaiGDG~ND~~mlk~-----AdvGIa~~g~e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
.+|+..++.+ +..+ . .++++||+.||..|++. +++||+|++... ...|+|.+.+-..+..+
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~---~t~A~y~L~dp~eV~~~ 372 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK---ESNAFYSLRDPSEVMEF 372 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC---CccceEEcCCHHHHHHH
Confidence 4899999988 6554 1 25999999999999996 588888865332 23689999886555544
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0035 Score=67.45 Aligned_cols=124 Identities=10% Similarity=0.115 Sum_probs=81.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+|+.++++.|++.|+++.++|+.....+..+-..+|+...-..+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~i--------------------------------- 155 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVV--------------------------------- 155 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEE---------------------------------
Confidence 56899999999999999999999999999998888888874321111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
+.+... -...-.|+-=..+++.+.-....+++|||+.
T Consensus 156 ---------------------i~~~d~----------------------~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~ 192 (260)
T PLN03243 156 ---------------------LAAEDV----------------------YRGKPDPEMFMYAAERLGFIPERCIVFGNSN 192 (260)
T ss_pred ---------------------EecccC----------------------CCCCCCHHHHHHHHHHhCCChHHeEEEcCCH
Confidence 111100 0001112211222333332335699999999
Q ss_pred cChHHhhhcCccc-cccCccccchhccCcEEecchhhhHHH
Q 001888 679 NDVGMLQEADIGV-GISGVEGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 679 ND~~mlk~AdvGI-a~~g~e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
+|+.+=+.||+-+ ++.|.........+|+++.+++.+...
T Consensus 193 ~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~ 233 (260)
T PLN03243 193 SSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVV 233 (260)
T ss_pred HHHHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHH
Confidence 9999999999964 554433222334589998888776544
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.019 Score=71.68 Aligned_cols=61 Identities=8% Similarity=0.083 Sum_probs=42.6
Q ss_pred cceeeEEeeecccccCCcHHHHHHH-HHcCCeEEEEcCCchhhHHHHHHH---cCccccCceEEE
Q 001888 507 DLILLGATAVEDKLQKGVPECIDKL-AQAGIKVWVLTGDKMETAINIGYA---CSLLRQEMKQIV 567 (1000)
Q Consensus 507 ~l~~lG~i~i~D~lr~~v~e~I~~l-~~aGIkv~mlTGD~~~ta~~ia~~---~gl~~~~~~~~~ 567 (1000)
|.|++-.....-.+.+++.+++++| ++.|+.++++|||...+....-.. ++++..++..+.
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir 668 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLR 668 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEE
Confidence 5555533322234567888999997 778999999999999998877644 456666655544
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0045 Score=64.38 Aligned_cols=109 Identities=15% Similarity=0.131 Sum_probs=74.1
Q ss_pred cccCCcHHHHH-HHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECID-KLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 519 ~lr~~v~e~I~-~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
.+.|++.++|+ .+++.|++++++|+-....+..+|+..++.... .++...-+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le-------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIE-------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeE--------------------------
Confidence 57899999996 788899999999999999999999886654321 11111100
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCCCEEEEEcC
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGD 676 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~~~vlaiGD 676 (1000)
+-+|.. +..-.|..++|..-++.. ........|-||
T Consensus 147 ---------------------~~~gg~----------------------~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsD 183 (210)
T TIGR01545 147 ---------------------RGNGGW----------------------VLPLRCLGHEKVAQLEQKIGSPLKLYSGYSD 183 (210)
T ss_pred ---------------------EeCCce----------------------EcCccCCChHHHHHHHHHhCCChhheEEecC
Confidence 001100 011234456777655544 323345679999
Q ss_pred CccChHHhhhcCccccccCcc
Q 001888 677 GANDVGMLQEADIGVGISGVE 697 (1000)
Q Consensus 677 G~ND~~mlk~AdvGIa~~g~e 697 (1000)
+.||.|||+.||.+++++..+
T Consensus 184 S~~D~pmL~~a~~~~~Vnp~~ 204 (210)
T TIGR01545 184 SKQDNPLLAFCEHRWRVSKRG 204 (210)
T ss_pred CcccHHHHHhCCCcEEECcch
Confidence 999999999999999985543
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.003 Score=66.55 Aligned_cols=42 Identities=17% Similarity=0.180 Sum_probs=38.1
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
-++-|++.++++.|++.|+++.++||.....+..+.+..|+.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 132 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR 132 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch
Confidence 367899999999999999999999999998888888888874
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0051 Score=64.19 Aligned_cols=109 Identities=15% Similarity=0.114 Sum_probs=75.4
Q ss_pred cccCCcHHHH-HHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECI-DKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 519 ~lr~~v~e~I-~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
.+.|++.++| +.+++.|++++++|+-...-+..++..+|+.. ...++...-+
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~-------------------------- 147 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQ-------------------------- 147 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEE--------------------------
Confidence 4589999999 57888999999999999999999999988622 1112211100
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCCCEEEEEcC
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIGD 676 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~~~vlaiGD 676 (1000)
...+|. +....|..+.|..-++.. ........|-||
T Consensus 148 --------------------~~~tg~-----------------------~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~D 184 (211)
T PRK11590 148 --------------------RRYGGW-----------------------VLTLRCLGHEKVAQLERKIGTPLRLYSGYSD 184 (211)
T ss_pred --------------------EEEccE-----------------------ECCccCCChHHHHHHHHHhCCCcceEEEecC
Confidence 011111 111234467787766544 433456689999
Q ss_pred CccChHHhhhcCccccccCcc
Q 001888 677 GANDVGMLQEADIGVGISGVE 697 (1000)
Q Consensus 677 G~ND~~mlk~AdvGIa~~g~e 697 (1000)
+.||.|||+.|+.+++++...
T Consensus 185 s~~D~pmL~~a~~~~~vnp~~ 205 (211)
T PRK11590 185 SKQDNPLLYFCQHRWRVTPRG 205 (211)
T ss_pred CcccHHHHHhCCCCEEECccH
Confidence 999999999999999986544
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0071 Score=65.62 Aligned_cols=41 Identities=15% Similarity=0.173 Sum_probs=38.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999998888874
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0043 Score=66.34 Aligned_cols=168 Identities=17% Similarity=0.227 Sum_probs=79.1
Q ss_pred HHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccC------ceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHh
Q 001888 528 IDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQE------MKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIRE 601 (1000)
Q Consensus 528 I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (1000)
++...+.++.++++|||+.+.+..+.++.++..++ +..+...........+...... .......+.+..++..
T Consensus 28 l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~d~~w~~~i~~-~w~~~~v~~~l~~~~~ 106 (247)
T PF05116_consen 28 LEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQPDEEWQAHIDE-RWDRERVEEILAELPG 106 (247)
T ss_dssp HHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE-HHHHHHHHT-T--HHHHHHHHHCHCC
T ss_pred HHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcChHHHHHHHHh-cCChHHHHHHHHHhhC
Confidence 33344778999999999999999999999986542 1111111111101111100000 0000000111111111
Q ss_pred hhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEE-----EcCCh--hhHHHHHHHH-hcCC---CE
Q 001888 602 GISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVIC-----CRSSP--KQKALVTRLV-KGTG---KT 670 (1000)
Q Consensus 602 ~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~-----~r~sp--~qK~~iV~~l-~~~~---~~ 670 (1000)
...+ ..........+..++.......+ +++...+......++ +++ ..+-| ..|...++.+ +..+ ..
T Consensus 107 l~~q-~~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~-~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~ 183 (247)
T PF05116_consen 107 LRPQ-PESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVN-VIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQ 183 (247)
T ss_dssp EEEG-GCCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEE-EEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGG
T ss_pred cccC-CccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCee-EEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHH
Confidence 0000 00111122344455554443322 233333332222222 122 23334 4699999999 4443 46
Q ss_pred EEEEcCCccChHHhhhcCccccccCcccc
Q 001888 671 TLAIGDGANDVGMLQEADIGVGISGVEGM 699 (1000)
Q Consensus 671 vlaiGDG~ND~~mlk~AdvGIa~~g~e~~ 699 (1000)
|+++||+.||.+||..++-||.++|.+..
T Consensus 184 vl~aGDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 184 VLVAGDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp EEEEESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred EEEEeCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 88899999999999999999988776543
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0085 Score=62.99 Aligned_cols=42 Identities=26% Similarity=0.200 Sum_probs=38.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
.++.+|+.+.++.|++.|+++.++||-....+..+.+..|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 479999999999999999999999999999998888888874
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0099 Score=62.41 Aligned_cols=40 Identities=20% Similarity=0.198 Sum_probs=33.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
++.||+.++++.|+++|+++.++|+.....+...-...|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999877666555555555
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0078 Score=64.36 Aligned_cols=45 Identities=18% Similarity=0.275 Sum_probs=41.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEM 563 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~ 563 (1000)
+++||+.+.++.|++.|+++.++||-....+..+.++.|+...+.
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~ 165 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV 165 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc
Confidence 579999999999999999999999999999999999999865543
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.013 Score=65.85 Aligned_cols=123 Identities=11% Similarity=0.154 Sum_probs=80.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+|+.++++.|+++|+++.++|+.....+..+-+..|+...-..
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~---------------------------------- 261 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSV---------------------------------- 261 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceE----------------------------------
Confidence 4779999999999999999999999999999999888887431111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
++.+... ....-.|+-=...++.+.-....+++|||..
T Consensus 262 --------------------Iv~sddv----------------------~~~KP~Peifl~A~~~lgl~Peecl~IGDS~ 299 (381)
T PLN02575 262 --------------------IVAAEDV----------------------YRGKPDPEMFIYAAQLLNFIPERCIVFGNSN 299 (381)
T ss_pred --------------------EEecCcC----------------------CCCCCCHHHHHHHHHHcCCCcccEEEEcCCH
Confidence 1111100 0001112222223333333456799999999
Q ss_pred cChHHhhhcCccc-cccCccccchhccCcEEecchhhhHH
Q 001888 679 NDVGMLQEADIGV-GISGVEGMQAVMSSDYAIAQFRFLER 717 (1000)
Q Consensus 679 ND~~mlk~AdvGI-a~~g~e~~~ak~~aD~vl~~f~~l~~ 717 (1000)
+|+.+-+.||+-. ++.+.........||+++.++..+..
T Consensus 300 ~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 300 QTVEAAHDARMKCVAVASKHPIYELGAADLVVRRLDELSI 339 (381)
T ss_pred HHHHHHHHcCCEEEEECCCCChhHhcCCCEEECCHHHHHH
Confidence 9999999999875 55432221122358999988887643
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.011 Score=63.68 Aligned_cols=42 Identities=29% Similarity=0.205 Sum_probs=37.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 560 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 560 (1000)
++.||+.++++.|+++|+++.++||.....+..+-+..|+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~ 140 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG 140 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC
Confidence 467999999999999999999999999998888888777643
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.1 Score=58.17 Aligned_cols=206 Identities=15% Similarity=0.099 Sum_probs=101.7
Q ss_pred cceeeEEeeecc--cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcC--ccccCceEEEEecCCchhhH-----
Q 001888 507 DLILLGATAVED--KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACS--LLRQEMKQIVITLDSPDMEA----- 577 (1000)
Q Consensus 507 ~l~~lG~i~i~D--~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~g--l~~~~~~~~~i~~~~~~~~~----- 577 (1000)
|.||+-++.-.| .+-+++.++|++|. .|++++++|||.......+..-.+ ++..++..+...+.......
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~~ 197 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQS 197 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhcccCceEEEcCCcEEecCCCcceeccccccc
Confidence 777776655333 37788999999999 789999999999999887732211 22222221111000000000
Q ss_pred hhhhccHHHHHHHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcC--------ceEE
Q 001888 578 LEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCA--------SVIC 649 (1000)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~--------~vi~ 649 (1000)
.......+. ....+.+...+...........-.....++.+.-...+.....++...+...+.... .|+=
T Consensus 198 ~~~~~~~~~--~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlE 275 (366)
T PLN03017 198 LLYQPANDY--LPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFE 275 (366)
T ss_pred cccccchhh--HHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEE
Confidence 000000000 000111212221111111111112334455544333222111223333333322222 2222
Q ss_pred EcCC-hhhHHHHHHHH-hcCC------CEEEEEcCCccChHHhhhcC-----ccccccCccccchhccCcEEecchhhhH
Q 001888 650 CRSS-PKQKALVTRLV-KGTG------KTTLAIGDGANDVGMLQEAD-----IGVGISGVEGMQAVMSSDYAIAQFRFLE 716 (1000)
Q Consensus 650 ~r~s-p~qK~~iV~~l-~~~~------~~vlaiGDG~ND~~mlk~Ad-----vGIa~~g~e~~~ak~~aD~vl~~f~~l~ 716 (1000)
.|.. ..+|+..++.+ +..+ ..++++||-..|-.|++... +||-++.... ...|+|.+.+-..+.
T Consensus 276 vRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L~dp~eV~ 352 (366)
T PLN03017 276 IRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSLQDPSEVM 352 (366)
T ss_pred ecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeCCCHHHHH
Confidence 2322 35899999988 5443 36899999999999999763 4444432121 246899998855544
Q ss_pred HH
Q 001888 717 RL 718 (1000)
Q Consensus 717 ~l 718 (1000)
.+
T Consensus 353 ~f 354 (366)
T PLN03017 353 DF 354 (366)
T ss_pred HH
Confidence 44
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.015 Score=58.23 Aligned_cols=158 Identities=22% Similarity=0.222 Sum_probs=85.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++-||+.++++.|++.= ..++++-.-..-+..+|..+|+...+...-..+-++...- +-..+++...
T Consensus 83 ~lvPgA~etm~~l~~~~-tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~P------------eeeR~E~L~~ 149 (315)
T COG4030 83 KLVPGAEETMATLQERW-TPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVP------------EEEREELLSI 149 (315)
T ss_pred ccCCChHHHHHHHhccC-CceEEeccHHHHHHHHHHhcCCCccccccccccCccccCC------------hHHHHHHHHh
Confidence 46699999999998754 4445555556678888988888544322211111110000 0000111111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHH----HHHHHHHHhhcCceEEEcCChhhHHHHHHHH---hcCCCEE
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKL----EKMFLDLAIDCASVICCRSSPKQKALVTRLV---KGTGKTT 671 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~----~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l---~~~~~~v 671 (1000)
+ ...-.++|+++-..+++-+ .....+++...++|- -..|+++++.+ +....-.
T Consensus 150 ~---------------~~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VG-----gg~ka~i~e~~~ele~~d~sa 209 (315)
T COG4030 150 I---------------DVIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVG-----GGEKAKIMEGYCELEGIDFSA 209 (315)
T ss_pred c---------------CccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhcc-----CcchhHHHHHHHhhcCCCcce
Confidence 1 0011344554433332210 112222222223221 13566777666 2233447
Q ss_pred EEEcCCccChHHhhhcC----ccccccCccccchhccCcEEecc
Q 001888 672 LAIGDGANDVGMLQEAD----IGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 672 laiGDG~ND~~mlk~Ad----vGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
+++||+..|+.|++++. +.|+..|++= |..-||+.+..
T Consensus 210 ~~VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvis 251 (315)
T COG4030 210 VVVGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVIS 251 (315)
T ss_pred eEecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEec
Confidence 99999999999999983 5567778877 78889988765
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.021 Score=57.50 Aligned_cols=41 Identities=24% Similarity=0.256 Sum_probs=31.8
Q ss_pred ccceeeEEeeecc----cccCCcHHHHHHHHHcCCeEEEEcCCch
Q 001888 506 RDLILLGATAVED----KLQKGVPECIDKLAQAGIKVWVLTGDKM 546 (1000)
Q Consensus 506 ~~l~~lG~i~i~D----~lr~~v~e~I~~l~~aGIkv~mlTGD~~ 546 (1000)
+|.++.|-..+.+ ++.|+++++++.|++.|+++.++|+...
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 4566655544442 3689999999999999999999998753
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.022 Score=56.10 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=31.5
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHH
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAI 550 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~ 550 (1000)
+|.+.+++++++++++++|++++++|||....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999999988874
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.025 Score=61.49 Aligned_cols=41 Identities=27% Similarity=0.152 Sum_probs=35.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++-||+.++|+.|++.|+++.++||.....+..+-+..|+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 56799999999999999999999999988877776666653
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.0098 Score=62.62 Aligned_cols=41 Identities=12% Similarity=0.142 Sum_probs=35.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCC----chhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGD----KMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD----~~~ta~~ia~~~gl~ 559 (1000)
.+.+++++.++.++++|+++.++|++ ...++..+.+.+|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 45556999999999999999999998 666889998888884
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.024 Score=62.07 Aligned_cols=38 Identities=29% Similarity=0.296 Sum_probs=32.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 556 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 556 (1000)
++.||+.+.++.|++.|+++.++|+-....+..+-...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999998877766555443
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.028 Score=59.02 Aligned_cols=41 Identities=12% Similarity=0.140 Sum_probs=36.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.|++.++++.|+++|++++++|+-....+....+.+|+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR 134 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH
Confidence 57899999999999999999999999888777777777763
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.029 Score=60.13 Aligned_cols=41 Identities=20% Similarity=0.074 Sum_probs=37.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.||+.++++.|++.|+++.++|+-....+..+-+..|+.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 148 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS 148 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999888888874
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.028 Score=57.97 Aligned_cols=43 Identities=21% Similarity=0.108 Sum_probs=38.4
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
.+++.++++++++.|++.|+++.++||.....+..+.+..|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 4557778899999999999999999999999999999988874
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.019 Score=60.35 Aligned_cols=41 Identities=12% Similarity=0.163 Sum_probs=35.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCc----hhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDK----METAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~----~~ta~~ia~~~gl~ 559 (1000)
.+.+++++.++.+++.|+++.++|||. ..++..+.+..|+-
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip 158 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIP 158 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCC
Confidence 477889999999999999999999975 45788888878873
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.059 Score=63.44 Aligned_cols=41 Identities=15% Similarity=0.099 Sum_probs=38.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.||+.+.++.|++.|+++.++|+.....+..+...+|+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~ 370 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD 370 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH
Confidence 68899999999999999999999999999999998888874
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.17 Score=50.85 Aligned_cols=37 Identities=11% Similarity=0.160 Sum_probs=32.9
Q ss_pred CcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 523 GVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 523 ~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
.+.+.+.+|+++|+.|+.+|..........-+++|+-
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999999988888888888864
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.069 Score=54.19 Aligned_cols=60 Identities=13% Similarity=0.116 Sum_probs=38.7
Q ss_pred HHHHHhcCCCEEEEEcCCccChHHhhhcCccc-ccc-Cccc-cchhccC--cEEecchhhhHHHH
Q 001888 660 VTRLVKGTGKTTLAIGDGANDVGMLQEADIGV-GIS-GVEG-MQAVMSS--DYAIAQFRFLERLL 719 (1000)
Q Consensus 660 iV~~l~~~~~~vlaiGDG~ND~~mlk~AdvGI-a~~-g~e~-~~ak~~a--D~vl~~f~~l~~ll 719 (1000)
+.+.+.-....+++|||+.+|+.+-+.||+.+ ++. |... ......+ |+++.++..+..++
T Consensus 112 ~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l 176 (181)
T PRK08942 112 IAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQAL 176 (181)
T ss_pred HHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHH
Confidence 33333333467999999999999999999864 332 2111 1112345 89988888777663
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.027 Score=62.35 Aligned_cols=44 Identities=20% Similarity=0.097 Sum_probs=40.3
Q ss_pred ecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 516 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 516 i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
..+++.+++.++++.|++.|++++++||+....+..+.+.+++.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 46789999999999999999999999999999999988888774
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.044 Score=62.61 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=33.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHH-HcCc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGY-ACSL 558 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~-~~gl 558 (1000)
++.+|+.++++.|++.|+++.++|+.....+..... ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 467999999999999999999999998877766554 4555
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.068 Score=51.02 Aligned_cols=41 Identities=22% Similarity=0.255 Sum_probs=34.9
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCc--------hhhHHHHHHHcCc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDK--------METAINIGYACSL 558 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~--------~~ta~~ia~~~gl 558 (1000)
-++.+++.++++.|+++|++++++|+.. ...+..+.+.+|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3678999999999999999999999988 6666667777766
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.11 Score=54.54 Aligned_cols=39 Identities=18% Similarity=0.094 Sum_probs=33.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
++.+++.++++.|+ +|+++.++|+.....+...-...|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l 133 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGL 133 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCCh
Confidence 46799999999999 6899999999887777776666666
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.07 Score=54.98 Aligned_cols=40 Identities=15% Similarity=0.216 Sum_probs=36.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
++.+++.++++.|+++|+++.++|+-+...+..+...+|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl 131 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGL 131 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCC
Confidence 5789999999999999999999999888888888888886
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.075 Score=55.98 Aligned_cols=41 Identities=15% Similarity=0.069 Sum_probs=35.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+|+.+.++.|+++|+++.++|+-....+...-...|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 57899999999999999999999998888877776667763
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.046 Score=54.60 Aligned_cols=43 Identities=19% Similarity=0.200 Sum_probs=39.5
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
..++.+++.+.++.|++.|++++++|+..........+..|+.
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 4578999999999999999999999999999999999998875
|
... |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.12 Score=54.32 Aligned_cols=40 Identities=23% Similarity=0.318 Sum_probs=35.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+++.++++.|++. ++++++|+-....+..+.+..|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 5789999999999999 999999999888888888888874
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.063 Score=54.54 Aligned_cols=38 Identities=21% Similarity=0.277 Sum_probs=30.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
++.|++.++|+.|+++|+++.++|+... +..+.+..|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l 124 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGL 124 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCc
Confidence 6789999999999999999999997532 3455566665
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.83 Score=50.84 Aligned_cols=206 Identities=16% Similarity=0.124 Sum_probs=97.1
Q ss_pred cceeeEEeeeccc--ccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc--cccCceEEEEecCCchhhH----h
Q 001888 507 DLILLGATAVEDK--LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL--LRQEMKQIVITLDSPDMEA----L 578 (1000)
Q Consensus 507 ~l~~lG~i~i~D~--lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl--~~~~~~~~~i~~~~~~~~~----~ 578 (1000)
|.|++-++---|. +-+++.++|+.|. ++..++++|||..........-.++ ...++..+........... .
T Consensus 106 DGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~~~~l~laGsHG~e~~~p~~g~~~~~~~~~~ 184 (354)
T PLN02151 106 DGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVKLTELYYAGSHGMDIKGPEQGSKYKKENQSL 184 (354)
T ss_pred CccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcCCccceEEEeCCceeecCCCCcccccccccc
Confidence 5555544422232 5678889999999 5679999999999988777543232 1112111111000000000 0
Q ss_pred hhhccHHHHHHHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhc--------CceEEE
Q 001888 579 EKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDC--------ASVICC 650 (1000)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~--------~~vi~~ 650 (1000)
......+. ....+.+...+.......+...-.....++.+.-.....-...++...+..++... +.++=.
T Consensus 185 ~~~~~~~~--~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEv 262 (354)
T PLN02151 185 LCQPATEF--LPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEI 262 (354)
T ss_pred ccccchhh--HHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEE
Confidence 00000000 00001111111111111111111223344444432221111112223333332222 223333
Q ss_pred cCC-hhhHHHHHHHH-hcCC------CEEEEEcCCccChHHhhhc-----CccccccCccccchhccCcEEecchhhhHH
Q 001888 651 RSS-PKQKALVTRLV-KGTG------KTTLAIGDGANDVGMLQEA-----DIGVGISGVEGMQAVMSSDYAIAQFRFLER 717 (1000)
Q Consensus 651 r~s-p~qK~~iV~~l-~~~~------~~vlaiGDG~ND~~mlk~A-----dvGIa~~g~e~~~ak~~aD~vl~~f~~l~~ 717 (1000)
|.. ..+|+..++.+ +..+ ..++++||-..|-.|++.. |+||-++.... ...|+|.|.+-..+..
T Consensus 263 rP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k---~T~A~y~L~dp~eV~~ 339 (354)
T PLN02151 263 RPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK---ETNASYSLQEPDEVME 339 (354)
T ss_pred eCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC---CCcceEeCCCHHHHHH
Confidence 432 34899999988 5433 3589999999999999864 45554431111 2368999988555554
Q ss_pred H
Q 001888 718 L 718 (1000)
Q Consensus 718 l 718 (1000)
+
T Consensus 340 ~ 340 (354)
T PLN02151 340 F 340 (354)
T ss_pred H
Confidence 4
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.066 Score=54.36 Aligned_cols=40 Identities=20% Similarity=0.244 Sum_probs=33.4
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
-++.||+.++++.|+++|+++.++|+. ..+..+.+..|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 368999999999999999999999987 5566666667763
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.14 Score=51.85 Aligned_cols=40 Identities=23% Similarity=0.207 Sum_probs=33.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+++.++++.|+++|++++++|+-.... ..+...+|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 678999999999999999999999988776 4444446663
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.16 Score=50.78 Aligned_cols=52 Identities=21% Similarity=0.173 Sum_probs=42.3
Q ss_pred ceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCC-chhhHHHHHHHcCcc
Q 001888 508 LILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGD-KMETAINIGYACSLL 559 (1000)
Q Consensus 508 l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD-~~~ta~~ia~~~gl~ 559 (1000)
.......+-+-++.+|+.++++.|+++|+++.++|+- ....+..+....|+.
T Consensus 34 ~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 34 SIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred CeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 3344555555678999999999999999999999976 888888888888763
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.093 Score=55.11 Aligned_cols=31 Identities=23% Similarity=0.345 Sum_probs=27.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETA 549 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta 549 (1000)
++.||+.++|+.|++.|+++.++||-.....
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 5789999999999999999999998765433
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.18 Score=49.29 Aligned_cols=38 Identities=16% Similarity=0.223 Sum_probs=33.3
Q ss_pred hHHHHHHHHhcCCCEEEEEcCCccChHHhhhcCccccc
Q 001888 656 QKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI 693 (1000)
Q Consensus 656 qK~~iV~~l~~~~~~vlaiGDG~ND~~mlk~AdvGIa~ 693 (1000)
+|...|+.++++...+.++|||+-|+++-+.+|+=.|-
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 68999999988888899999999999998888887753
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.16 Score=49.81 Aligned_cols=40 Identities=18% Similarity=0.348 Sum_probs=33.6
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 556 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 556 (1000)
+.+..+++.+.++.|++.|+++.++|+.....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 4445689999999999999999999999988877766554
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.4 Score=48.31 Aligned_cols=48 Identities=17% Similarity=0.174 Sum_probs=33.3
Q ss_pred CCEEEEEcCCccChHHhhhcCccc--cc-cCcccc-chhccCcEEecchhhh
Q 001888 668 GKTTLAIGDGANDVGMLQEADIGV--GI-SGVEGM-QAVMSSDYAIAQFRFL 715 (1000)
Q Consensus 668 ~~~vlaiGDG~ND~~mlk~AdvGI--a~-~g~e~~-~ak~~aD~vl~~f~~l 715 (1000)
...++||||...|+.+=+.||+.. ++ .|.... .....+|+++.++..|
T Consensus 123 ~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 123 MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 366899999999999999999963 33 232211 1223589999877654
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=93.07 E-value=0.32 Score=50.19 Aligned_cols=39 Identities=13% Similarity=0.110 Sum_probs=31.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
++-|++.++++.|+++|+++.++|+-... +......+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 57899999999999999999999986543 3555555665
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=93.05 E-value=0.1 Score=51.01 Aligned_cols=41 Identities=17% Similarity=0.013 Sum_probs=36.6
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
.-+++||+.+.++.|+ .++++.++|+-....+..+.+.+++
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCc
Confidence 3468999999999999 5799999999999999998888776
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=93.02 E-value=0.43 Score=51.20 Aligned_cols=42 Identities=10% Similarity=0.163 Sum_probs=32.3
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHH---HHHHHcCc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAI---NIGYACSL 558 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~---~ia~~~gl 558 (1000)
..++-|++.+.++.+++.|+++.++||+...... ..-+..|+
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi 160 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGF 160 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCc
Confidence 4457799999999999999999999999854433 33444555
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=92.83 E-value=0.25 Score=48.12 Aligned_cols=27 Identities=30% Similarity=0.393 Sum_probs=25.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDK 545 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~ 545 (1000)
++.+++.++++.|++.|+++.++|+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 478999999999999999999999875
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=92.75 E-value=0.35 Score=47.93 Aligned_cols=26 Identities=35% Similarity=0.517 Sum_probs=23.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCC
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGD 544 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD 544 (1000)
++-+++.++++.|+++|+++.++|..
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 46799999999999999999999985
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=92.21 E-value=0.41 Score=50.84 Aligned_cols=186 Identities=15% Similarity=0.130 Sum_probs=72.5
Q ss_pred cccCCcHHHHHHHHHcC-CeEEEEcCCchhhHHHHHHH--cCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAG-IKVWVLTGDKMETAINIGYA--CSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESV 595 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aG-Ikv~mlTGD~~~ta~~ia~~--~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1000)
.+.+++.+++++|-+.. ..|+++||+..........- ++++..++..+...+...... ......... .+.+
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~-~~~~~~~~~-----~~~~ 92 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTN-LPADEDLEW-----KDEV 92 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE--TTGGGGHHH-----HHHH
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCccccccc-cccccchHH-----HHHH
Confidence 35678889999998764 58999999999885555322 233444444333333211110 000000000 0111
Q ss_pred HHHHHhhhhhhcccccCccceEEEEeccchH----HHhhHHHHHHHHHHHh--------hcCceEEEcCChhhHHHHHHH
Q 001888 596 TKQIREGISQVNSAKESKVTFGLVIDGKSLD----FALDKKLEKMFLDLAI--------DCASVICCRSSPKQKALVTRL 663 (1000)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~----~~~~~~~~~~~~~~~~--------~~~~vi~~r~sp~qK~~iV~~ 663 (1000)
...+.......+...-.....++.+.-.... .....++...+..... .-+.++=.|..-..|+..++.
T Consensus 93 ~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEvrp~~~~KG~av~~ 172 (235)
T PF02358_consen 93 REILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEVRPPGVNKGSAVRR 172 (235)
T ss_dssp HHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEEE-TT--HHHHHHH
T ss_pred HHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEEEeCCCChHHHHHH
Confidence 1111111111111111112233333322111 1111223333333222 223445556555569999998
Q ss_pred H-hcCC------CEEEEEcCCccChHHhhhcCc------cccccCccccchhccCcEEec
Q 001888 664 V-KGTG------KTTLAIGDGANDVGMLQEADI------GVGISGVEGMQAVMSSDYAIA 710 (1000)
Q Consensus 664 l-~~~~------~~vlaiGDG~ND~~mlk~Adv------GIa~~g~e~~~ak~~aD~vl~ 710 (1000)
+ +..+ ..++++||...|-.|++..+- ||-+...+......+|+|-+.
T Consensus 173 ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~ 232 (235)
T PF02358_consen 173 LLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLD 232 (235)
T ss_dssp HHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES----------------
T ss_pred HHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccc
Confidence 8 6554 379999999999999988544 444433332213455666554
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=91.68 E-value=0.5 Score=44.81 Aligned_cols=39 Identities=10% Similarity=0.072 Sum_probs=32.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCC-chhhHHHHHHHcC
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGD-KMETAINIGYACS 557 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD-~~~ta~~ia~~~g 557 (1000)
++.+++.++++.|+++|+++.++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 6666666555444
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=91.42 E-value=0.46 Score=47.61 Aligned_cols=40 Identities=18% Similarity=0.297 Sum_probs=33.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCc-hhhHHHHHHHcCc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDK-METAINIGYACSL 558 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~-~~ta~~ia~~~gl 558 (1000)
.+.+++.++++.|++.|++++++|+.. ...+..+.+.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 578999999999999999999999987 4556666666665
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=91.34 E-value=0.73 Score=48.06 Aligned_cols=31 Identities=23% Similarity=0.279 Sum_probs=27.8
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhh
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMET 548 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~t 548 (1000)
-|.-+++.++++.+++.|++|+++|||....
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 3677999999999999999999999999755
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=91.16 E-value=0.71 Score=48.23 Aligned_cols=39 Identities=15% Similarity=0.203 Sum_probs=32.4
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHH
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA 555 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~ 555 (1000)
+-++.+++.++++.|+++|+++.++|..+......+-..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~ 131 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH 131 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh
Confidence 457899999999999999999999999887665555443
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=90.16 E-value=0.55 Score=48.83 Aligned_cols=29 Identities=24% Similarity=0.288 Sum_probs=25.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchh
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKME 547 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ 547 (1000)
++.|++.++++.|+++|++++++|+....
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 57899999999999999999999986543
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=89.73 E-value=1.5 Score=43.71 Aligned_cols=27 Identities=22% Similarity=0.413 Sum_probs=23.8
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCch
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDKM 546 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~~ 546 (1000)
+-+|+.++++.|+++|+++.++|....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 349999999999999999999997543
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=89.44 E-value=1.5 Score=56.90 Aligned_cols=41 Identities=22% Similarity=0.041 Sum_probs=36.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
.+.+|+.+.++.|+++|+++.++|+-....+..+-+..|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 36799999999999999999999999988888887788873
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.28 E-value=1.3 Score=49.51 Aligned_cols=27 Identities=30% Similarity=0.388 Sum_probs=24.7
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCC
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGD 544 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD 544 (1000)
-++.|++.++++.|+++|+++.++|+-
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 368899999999999999999999984
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=89.26 E-value=0.86 Score=50.83 Aligned_cols=37 Identities=19% Similarity=0.204 Sum_probs=33.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA 555 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~ 555 (1000)
++.+++.++|+.|++.|+++.++|.-+...|..+-+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 3568899999999999999999999999988887766
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.45 E-value=0.63 Score=48.79 Aligned_cols=38 Identities=8% Similarity=0.129 Sum_probs=30.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+|++++++.| ++++.++|+.....+...-+..|+.
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 5668999999998 5999999998877777666666663
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=88.44 E-value=1.6 Score=45.82 Aligned_cols=42 Identities=17% Similarity=0.157 Sum_probs=36.2
Q ss_pred cccCCcHHHHHHH--HHcCCeEEEEcCCchhhHHHHHHHcCccc
Q 001888 519 KLQKGVPECIDKL--AQAGIKVWVLTGDKMETAINIGYACSLLR 560 (1000)
Q Consensus 519 ~lr~~v~e~I~~l--~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 560 (1000)
|+.++.+++++.+ +..|+.+.++|--+..-...+-+.-|+-.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~ 114 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD 114 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc
Confidence 6789999999999 56899999999999888888888888743
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=87.16 E-value=1.6 Score=44.72 Aligned_cols=39 Identities=13% Similarity=0.039 Sum_probs=26.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
++.||+.+++++|++.+ +.+++|.-+.......-+.+++
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l 112 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNL 112 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCH
Confidence 47899999999999975 5677776554443333344444
|
2 hypothetical protein; Provisional |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=85.90 E-value=2 Score=45.72 Aligned_cols=48 Identities=10% Similarity=0.131 Sum_probs=36.9
Q ss_pred EEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHH--HHHHHcCcc
Q 001888 512 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAI--NIGYACSLL 559 (1000)
Q Consensus 512 G~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~--~ia~~~gl~ 559 (1000)
|.+.-.+.+-|+++++++.|+++|+++.++|+-....+. ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 555556788999999999999999999999996544333 445666763
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=85.69 E-value=0.81 Score=41.34 Aligned_cols=47 Identities=19% Similarity=0.218 Sum_probs=36.0
Q ss_pred EEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHH---HHcCc
Q 001888 512 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIG---YACSL 558 (1000)
Q Consensus 512 G~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia---~~~gl 558 (1000)
|++...+.+=|++.++|+.|+++|++++++|.....+...++ +.+|+
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi 56 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGI 56 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCc
Confidence 566667889999999999999999999999998876655555 44565
|
... |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.29 E-value=5.4 Score=40.63 Aligned_cols=40 Identities=15% Similarity=0.153 Sum_probs=32.6
Q ss_pred cccCCcHHHHHHHHHcCC-eEEEEcCCchhhHHHHHHHcCc
Q 001888 519 KLQKGVPECIDKLAQAGI-KVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGI-kv~mlTGD~~~ta~~ia~~~gl 558 (1000)
|+-|+..++|+.+++.|- .+++++--|.--...+-+..|+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence 677999999999999997 8899988887666666666665
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=85.21 E-value=3.7 Score=40.05 Aligned_cols=36 Identities=28% Similarity=0.338 Sum_probs=31.6
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHH
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINI 552 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~i 552 (1000)
+|..++++.+..+.+++.|.+++-+|+|+..-|...
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~T 60 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRT 60 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHH
Confidence 379999999999999999999999999997655443
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.78 E-value=5.6 Score=38.78 Aligned_cols=40 Identities=20% Similarity=0.262 Sum_probs=35.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
..-|++++=+..++++|+++.+++.-+...+..++..+|+
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 3567778888999999999999999998888888988887
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=84.26 E-value=2.1 Score=44.05 Aligned_cols=30 Identities=27% Similarity=0.308 Sum_probs=26.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhh
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMET 548 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~t 548 (1000)
++.+++.++++.|+++|+++.++|+-+...
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 468999999999999999999999976544
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.06 E-value=21 Score=38.34 Aligned_cols=166 Identities=10% Similarity=0.051 Sum_probs=85.8
Q ss_pred ecccccCCcHHHHHHHHHc-CCeEEEEcCCchhhHHHHHHH--cCccccCceEE-EEecCCchhhHhhhhccHHHHHHHH
Q 001888 516 VEDKLQKGVPECIDKLAQA-GIKVWVLTGDKMETAINIGYA--CSLLRQEMKQI-VITLDSPDMEALEKQGDKENITKVS 591 (1000)
Q Consensus 516 i~D~lr~~v~e~I~~l~~a-GIkv~mlTGD~~~ta~~ia~~--~gl~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~ 591 (1000)
....+-++..+.+++|... ..-+||+||++.........- +|++..++... ..++....... ..+.+ ..
T Consensus 37 ~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~-----~~~~~--~~ 109 (266)
T COG1877 37 EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLA-----EEADL--RW 109 (266)
T ss_pred cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecC-----HHHHh--hH
Confidence 3445778889999999877 567999999999888777653 33444444433 33333211100 00000 00
Q ss_pred HHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhH--HHHHHHH--H----HHhhcCceEEEcCChhhHHHHHHH
Q 001888 592 LESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK--KLEKMFL--D----LAIDCASVICCRSSPKQKALVTRL 663 (1000)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~--~~~~~~~--~----~~~~~~~vi~~r~sp~qK~~iV~~ 663 (1000)
.+.+...++......+...-.....++.+.-.....-... ....... . -....+.+|-+|.+-..|+.+++.
T Consensus 110 ~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~ 189 (266)
T COG1877 110 LKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKY 189 (266)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHH
Confidence 1112222222222222111111222222221111000000 0000000 0 012335678888887789999997
Q ss_pred H-hcCC---CEEEEEcCCccChHHhhhcC
Q 001888 664 V-KGTG---KTTLAIGDGANDVGMLQEAD 688 (1000)
Q Consensus 664 l-~~~~---~~vlaiGDG~ND~~mlk~Ad 688 (1000)
+ +... ..+++.||-.-|-.|++..+
T Consensus 190 i~~~~~~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 190 IMDELPFDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred HHhcCCCCCCcceecCCCCccHHHHHhhc
Confidence 7 5543 35999999999999999988
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=82.99 E-value=3.1 Score=43.78 Aligned_cols=30 Identities=23% Similarity=0.316 Sum_probs=27.1
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchh
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKME 547 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ 547 (1000)
++.-|++.+.++.+++.|++|+.+|||+..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 466689999999999999999999999865
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=82.17 E-value=11 Score=44.60 Aligned_cols=78 Identities=14% Similarity=0.213 Sum_probs=51.6
Q ss_pred hhhHHHHHHHHhcCCCEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchhhhHHHHHHhhhhhhhhhhhH
Q 001888 654 PKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMM 733 (1000)
Q Consensus 654 p~qK~~iV~~l~~~~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~~l~~lll~~gR~~~~~i~~~ 733 (1000)
-++|..-++..........+.||+.||.+||+.|+-+..+..+.. . .+...+....+++..||..++=.-..
T Consensus 174 Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~------~--~~~~~~~~~~~~fhdgrl~~~p~~~~ 245 (497)
T PLN02177 174 GDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPRTKC------E--PLPRNKLLSPVIFHEGRLVQRPTPLV 245 (497)
T ss_pred cHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCCCCC------C--cCCcccCCCceeeeCCcccCCCCHHH
Confidence 345666555332111223799999999999999999998854221 1 14555667788788999998776655
Q ss_pred HHHHHH
Q 001888 734 ICYFFY 739 (1000)
Q Consensus 734 i~~~~~ 739 (1000)
.+.++.
T Consensus 246 ~l~~~~ 251 (497)
T PLN02177 246 ALLTFL 251 (497)
T ss_pred HHHHHH
Confidence 554433
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.32 E-value=8.6 Score=38.56 Aligned_cols=26 Identities=35% Similarity=0.437 Sum_probs=23.6
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCc
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDK 545 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~ 545 (1000)
+.+++.+++..|+++|.+++|+|.-.
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQs 57 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQS 57 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCC
Confidence 57999999999999999999999743
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1000 | ||||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 1e-09 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 4e-09 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 1e-08 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 4e-07 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 4e-07 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 6e-07 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 3e-06 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 4e-06 |
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1000 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 2e-32 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 3e-28 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 3e-27 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 7e-22 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 2e-04 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 8e-19 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 8e-04 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 3e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 1e-07 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 2e-07 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 2e-06 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 4e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 4e-05 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 5e-05 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 8e-05 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 4e-04 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 2e-32
Identities = 94/487 (19%), Positives = 153/487 (31%), Gaps = 127/487 (26%)
Query: 224 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ 283
E LG I SDKTGTLT N M SV + ++ F + S
Sbjct: 341 ETLGCTSVICSDKTGTLTTNQM-----SVCKMFII------DKVDGDFCSLNEFSITGS- 388
Query: 284 TDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNE 343
+ E + N + + D + + + A+C+ + D NE
Sbjct: 389 ------------------TYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNE 430
Query: 344 ETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLE 403
G E E A ++ F + ++S E + ++ + LE
Sbjct: 431 TKGVYEKVGE-ATETALTTLVEKMN--VFNTEVRNLSKVERANACNSVIRQLMKKEFTLE 487
Query: 404 FTSSRKRMSVMVRNPENQL-----LLLCKGA-DSVM----FERLSKHGQQFEAETRRHIN 453
F+ RK MSV ++ + KGA + V+ + R+ + I
Sbjct: 488 FSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKIL 547
Query: 454 R------YAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERD 507
LR L +A R+ + +S + E D
Sbjct: 548 SVIKEWGTGRDTLRCLALATRDTPPKR----------------EEMVLDDSSRFMEYETD 591
Query: 508 LILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIV 567
L +G + D +K V I AGI+V ++TGD TAI I ++I
Sbjct: 592 LTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC----------RRI- 640
Query: 568 ITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDF 627
GI E++ G+ D
Sbjct: 641 ----------------------------------GI-----FGENEEVADRAYTGREFDD 661
Query: 628 ALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVK---GTGKTTLAIGDGANDVGML 684
+ + A A R P K +++V+ + T GDG ND L
Sbjct: 662 LPLAEQRE-----ACRRACCF-ARVEPSHK---SKIVEYLQSYDEITAMTGDGVNDAPAL 712
Query: 685 QEADIGV 691
++A+IG+
Sbjct: 713 KKAEIGI 719
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 3e-28
Identities = 92/491 (18%), Positives = 149/491 (30%), Gaps = 136/491 (27%)
Query: 224 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ 283
E LG I SDKTGTLT N M +V+ + + D ++
Sbjct: 375 ETLGSTSVICSDKTGTLTQNRM-----TVSHLWFD---------------NHIHSADTTE 414
Query: 284 TDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNE 343
+ + S+ + RVL +C+ A +
Sbjct: 415 DQSGQ---------------------------TFDQSSETWRALCRVLTLCNRAAFKSGQ 447
Query: 344 ETGEISYEAES--PDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHV 401
+ + E A + + + + +
Sbjct: 448 DAVPVPKRIVIGDASETALLKFSELTLG------------------NAMGYRERFPKVCE 489
Query: 402 LEFTSSRKRMSVMVRNPE---NQLLLLCKGADSVMFERLSK---HGQQ--FEAETRRHI- 452
+ F S+ K + + + +L+ KGA + ER S GQ+ + + R
Sbjct: 490 IPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQ 549
Query: 453 ---NRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLI 509
G R L L E +Y A A L
Sbjct: 550 TAYLSLGGLGERVLGFCQLYLSEKDY---------------PPGYAFDVEAMNFPTSGLS 594
Query: 510 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVIT 569
G ++ D + VP+ + K AGI+V ++TGD TA I + I
Sbjct: 595 FAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIA----------ASVGII 644
Query: 570 LDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFAL 629
S E +E + + K VI+G L +
Sbjct: 645 --SEGSETVEDIAARLRVP------------------VDQVNRKDARACVINGMQLK-DM 683
Query: 630 DKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG---TGKTTLAIGDGANDVGMLQE 686
D ++ ++ R+SP+QK +V+ G GDG ND L++
Sbjct: 684 D---PSELVEALRTHPEMVFARTSPQQK---LVIVESCQRLGAIVAVTGDGVNDSPALKK 737
Query: 687 ADIGV--GISG 695
ADIGV GI+G
Sbjct: 738 ADIGVAMGIAG 748
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 3e-27
Identities = 101/491 (20%), Positives = 162/491 (32%), Gaps = 136/491 (27%)
Query: 224 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQ 283
E LG TI SDKTGTLT N M +VA + + + E D ++
Sbjct: 370 ETLGSTSTICSDKTGTLTQNRM-----TVAHMWFD---------------NQIHEADTTE 409
Query: 284 TDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNE 343
+ + S R+ A+C+ A+ +
Sbjct: 410 NQSGA---------------------------AFDKTSATWSALSRIAALCNRAVFQAGQ 442
Query: 344 ETGEISYEAES--PDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHV 401
+ I + + E+A + S Q + +
Sbjct: 443 DNVPILKRSVAGDASESALLKCIELCCG------------------SVQGMRDRNPKIVE 484
Query: 402 LEFTSSRKRMSVMVRNP---ENQLLLLCKGADSVMFERLSK---HGQQ--FEAETRRHI- 452
+ F S+ K + N E++ LL+ KGA + +R S +G + + + +
Sbjct: 485 IPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQ 544
Query: 453 ---NRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLI 509
G R L + L ED+Y ++ A DL
Sbjct: 545 NAYLELGGLGERVLGFCHFALPEDKY---------------NEGYPFDADEPNFPTTDLC 589
Query: 510 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVIT 569
+G A+ D + VP+ + K AGIKV ++TGD TA I K + I
Sbjct: 590 FVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA----------KGVGII 639
Query: 570 LDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFAL 629
+ + I +V+ V+ G L L
Sbjct: 640 SEGNETIEDIAARLNIPIGQVNPRDAK--------------------ACVVHGSDLK-DL 678
Query: 630 DKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG---TGKTTLAIGDGANDVGMLQE 686
++ D+ ++ R+SP+QK +V+G G GDG ND L++
Sbjct: 679 S---TEVLDDILHYHTEIVFARTSPQQK---LIIVEGCQRQGAIVAVTGDGVNDSPALKK 732
Query: 687 ADIGV--GISG 695
ADIGV GISG
Sbjct: 733 ADIGVAMGISG 743
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 7e-22
Identities = 52/300 (17%), Positives = 94/300 (31%), Gaps = 84/300 (28%)
Query: 396 YELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRY 455
+H L F KR ++ + + KGA + E L+K + I++Y
Sbjct: 392 IREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILE-LAKASNDLSKKVLSIIDKY 450
Query: 456 AEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATA 515
AE GLR+L +A + + E E +G
Sbjct: 451 AERGLRSLAVARQVVPEKT--------------------------KESPGAPWEFVGLLP 484
Query: 516 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDM 575
+ D + E I + G+ V ++TGD++ G +++ + +
Sbjct: 485 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG----------RRLGMGTNMYPS 534
Query: 576 EALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEK 635
AL ++ V + I + DG FA
Sbjct: 535 SAL---LGTHKDANLASIPVEELIEK------------------ADG----FA------- 562
Query: 636 MFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISG 695
P+ K + + ++ GDG ND L++ADIG+ ++
Sbjct: 563 ---------------GVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVAD 607
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 2e-04
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 224 EELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYG 258
EE+ +D + SDKTGTLT N + K V G
Sbjct: 318 EEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKG 352
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 8e-19
Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 97/304 (31%)
Query: 396 YELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHI--- 452
Y++L F K++ +V +P+ + + KGA + + + E +
Sbjct: 443 YKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLK-TVEEDHPIPEEVDQAYKNK 501
Query: 453 -NRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILL 511
+A G R+L +A + E +L
Sbjct: 502 VAEFATRGFRSLGVARKR----------------------------------GEGSWEIL 527
Query: 512 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLD 571
G D + + + + G+ + +LTGD + A +Q+ + +
Sbjct: 528 GIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETS----------RQLGLGTN 577
Query: 572 SPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDK 631
+ E L G + V + DG FA
Sbjct: 578 IYNAERLGLGG----GGDMPGSEVYDFVEA------------------ADG----FA--- 608
Query: 632 KLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGV 691
P+ K V +++ G GDG ND L++AD G+
Sbjct: 609 -------------------EVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGI 649
Query: 692 GISG 695
+ G
Sbjct: 650 AVEG 653
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 8e-04
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 224 EELGQVDTILSDKTGTLTCNSMEFVKC-SVAGVAYGRVM 261
E L V+ + SDKTGTLT N + +VAGV +M
Sbjct: 367 ESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGVDPEDLM 405
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 3e-15
Identities = 28/132 (21%), Positives = 46/132 (34%), Gaps = 32/132 (24%)
Query: 390 QKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSK---HGQQ--F 444
+ + ++ + + F R+RMSV+V L+CKGA + S+ +G+
Sbjct: 50 RSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPL 109
Query: 445 EAETRRHI----NRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASA 500
+ R I + GLR + +A + L E
Sbjct: 110 DDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDY----------------------- 146
Query: 501 AEKIERDLILLG 512
E DLIL G
Sbjct: 147 QRADESDLILEG 158
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.4 bits (135), Expect = 5e-08
Identities = 78/513 (15%), Positives = 151/513 (29%), Gaps = 177/513 (34%)
Query: 168 LHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYY-EDTDKPARARTSNLNEEL 226
+ F TG Y Y +I+ V + F++ + D +D K + EE
Sbjct: 7 MDFETGEHQYQYK---------DILSVFEDAFVD-NFDCKDVQDMPKSILS-----KEE- 50
Query: 227 GQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERT-----LAKRKGERTFE--V 279
+D I+ K V T K E + V
Sbjct: 51 --IDHIIMSKD-------------------------AVSGTLRLFWTLLSKQEEMVQKFV 83
Query: 280 DDS-QTDAPGLNGNIVESGKS----VKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAIC 334
++ + + L I + + + + +R+ N V ++ + + L
Sbjct: 84 EEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL--- 140
Query: 335 HTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHEL--DPVSGQKV 392
A+ ++ + G GS +T ++L V +
Sbjct: 141 RQALLELRPAKNVLID-----------------GV--LGSGKTWVALDVCLSYKVQCKMD 181
Query: 393 NRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQ-------QFE 445
+++ L + +V+ L L D + S H +
Sbjct: 182 FKIF----WLNLKNCNSPETVL-----EMLQKLLYQIDP-NWTSRSDHSSNIKLRIHSIQ 231
Query: 446 AETRRHI--NRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKA-----KTSVTSDREALVA 498
AE RR + Y L++ L + + A K +T+ R V
Sbjct: 232 AELRRLLKSKPYENC----LLV----L--LN--VQNAKAWNAFNLSCKILLTT-RFKQVT 278
Query: 499 SAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMET--AINIGYAC 556
L AT L LT D++++ +
Sbjct: 279 DF---------LSAATTTHISLDH--------------HSMTLTPDEVKSLLLKYLDCRP 315
Query: 557 SLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGIS------QVNSAK 610
L +E+ +P ++S+ + + IR+G++ VN K
Sbjct: 316 QDLPREVLTT-----NP--------------RRLSI--IAESIRDGLATWDNWKHVNCDK 354
Query: 611 ESKVTFGLVIDGKSLDFALD-KKLEKMFLDLAI 642
+ + I+ SL+ L+ + KMF L++
Sbjct: 355 LTTI-----IE-SSLN-VLEPAEYRKMFDRLSV 380
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.3 bits (127), Expect = 4e-07
Identities = 94/700 (13%), Positives = 200/700 (28%), Gaps = 188/700 (26%)
Query: 344 ETGEISYEAES--PD-EAAFVIAAREVGFQFFGSSQTSI-SLHELDPV--SGQKVNRVYE 397
ETGE Y+ + E AFV + SI S E+D + S V+
Sbjct: 10 ETGEHQYQYKDILSVFEDAFV---DNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR 66
Query: 398 LLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAE 457
L L E + + + ++ L + E R
Sbjct: 67 LFWTLL------------SKQEEMVQKFVEEVLRINYKFLM---SPIKTEQR------QP 105
Query: 458 AGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVE 517
+ + + I R+ R++ + AK +V+ R K+ + L+ E
Sbjct: 106 SMMTRMYIEQRD------RLYNDNQVFAKYNVS--RLQPY----LKLRQALL-------E 146
Query: 518 DKLQKGVPECIDKLAQAGIKVWVLTGD-----KMETA-------INIGYACS--LLRQEM 563
+ K V ID + +G K + D K++ +N+ S + + +
Sbjct: 147 LRPAKNV--LIDGVLGSG-K-TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEML 202
Query: 564 KQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGK 623
++++ +D + D + K+ + S+ ++R + + L++
Sbjct: 203 QKLLYQIDPN----WTSRSDHSSNIKLRIHSIQAELRRLLKS-KPYENC-----LLV--- 249
Query: 624 SLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGM 683
L + K F + C ++ R VT + T +++ + + +
Sbjct: 250 -LLNVQNAKAWNAF---NLSCKILLTTRFKQ-----VTDFLSAATTTHISLDH--HSMTL 298
Query: 684 LQEADIGVGISGVEGM-------QAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICY 736
+ + + + + ++ ++ E + W + +
Sbjct: 299 TPDEVKSL-LLKYLDCRPQDLPREVLTTNPRRLSIIA--ESIRDGLATWDNWK------H 349
Query: 737 FFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDV---SAR 793
LT R ++ L VF +
Sbjct: 350 VNCDKLTTIIESS-LNVLEPAEYRKMFDR-----------------LSVFPPSAHIPTIL 391
Query: 794 LCLKYPLLYQEGVQNILFSWPR---ILGWMSNGVLSAIIIFFFTTNSIFNQAFRKDGHAV 850
L L + + + V ++ + + + SI +
Sbjct: 392 LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI-----------SIPSIYLELKVKLE 440
Query: 851 DYEVLGVAMYSSVVWAVN-----CQMALSI----NYFTW-I-QHFFIWGSIALWYIFLVV 899
+ A++ S+V N L YF I H +F +V
Sbjct: 441 NE----YALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMV 496
Query: 900 YGSLPPTF-------STTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRP 952
+ F +TA+ A +++TL Y+ + P
Sbjct: 497 FLDF--RFLEQKIRHDSTAW------NASG---------SILNTLQQLKFYKPYICDNDP 539
Query: 953 MYHDLIQ--RQRLEGSETEISSQTEVSSELPAQVEIKMQH 990
Y L+ L E + + S+ + I +
Sbjct: 540 KYERLVNAILDFLPKIEENL-----ICSKYTDLLRIALMA 574
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.5 bits (125), Expect = 7e-07
Identities = 75/554 (13%), Positives = 154/554 (27%), Gaps = 156/554 (28%)
Query: 3 LDGETNLKLKRSLEATNHLRDEESFQKFTAVIKCEDPNERLYSFVGTLQYEGKQYP--LS 60
D ++ K ++ +D S E + FV + Y +S
Sbjct: 39 QDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEV--LRINYKFLMS 96
Query: 61 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRS-KIERKMDKIVYLLFSTL 119
P + R + Y+ + N +K + + K+ L
Sbjct: 97 PIKTEQRQPSMMTRMYIEQR--------DRLYNDNQVFAKYNVSRLQPYLKLRQALLE-- 146
Query: 120 ILISSTGSVFFGIETKRDIDG-GKIRRWYLQPDDATVFYDPRRAPLAAFL---HFLTGLM 175
L + + G+ G GK T +A + + + M
Sbjct: 147 -LRPAKNVLIDGVL------GSGK-----------TW--------VALDVCLSYKVQCKM 180
Query: 176 LYG-YLIPISLYISIE-IVKVLQSVFINHDRDMY-YEDTDKPARARTSNLNEELGQVDT- 231
+ + + + S E ++++LQ + D + D + R ++ EL ++
Sbjct: 181 DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240
Query: 232 --------ILSDKTGTLTCNSMEFVKC-------------SVAGVAYGRV-MTEVERTLA 269
+L + N+ C ++ + + TL
Sbjct: 241 KPYENCLLVLLNVQNAKAWNAFNL-SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT 299
Query: 270 KRKGERTFE--VDDSQTDAP--GLNGN------IVESGKSVKGFNFRDERIMNGQW--VN 317
+ + +D D P L N I ES RD W VN
Sbjct: 300 PDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAES--------IRDGLATWDNWKHVN 351
Query: 318 -EPHSDVIQKF------------FRVLAICHTAIP-DVN--EETGEISYEAESPDEAAFV 361
+ + +I+ F L++ P + + + + V
Sbjct: 352 CDKLTTIIESSLNVLEPAEYRKMFDRLSV----FPPSAHIPTILLSLIWFDVIKSDVMVV 407
Query: 362 IAAREVGFQFFGSS-------QTSISLHELDPVSGQKVNRVYELLH--VLEFTSSRKRMS 412
+ + S +++IS+ + K+ Y LH +++ + K
Sbjct: 408 VN------KLHKYSLVEKQPKESTISIPSIYLELKVKLENEYA-LHRSIVDHYNIPKTF- 459
Query: 413 VMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGE 472
+ L+ D + + H + E H R R + + +R
Sbjct: 460 -----DSDDLIPPY--LDQYFYSHIGHHLKNIE-----HPERMTL--FRMVFLDFR---- 501
Query: 473 DEYRIWEKEFLKAK 486
FL+ K
Sbjct: 502 ---------FLEQK 506
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 4e-05
Identities = 82/616 (13%), Positives = 183/616 (29%), Gaps = 178/616 (28%)
Query: 469 ELGEDEYR------IWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQK 522
E GE +Y+ ++E F+ D + + S K E D I++ AV
Sbjct: 10 ETGEHQYQYKDILSVFEDAFVDNFD--CKDVQDMPKSILSKEEIDHIIMSKDAVS----- 62
Query: 523 GVPECIDKLAQAGIK-VWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQ 581
G L + V + + N + S ++ E +Q S +Q
Sbjct: 63 GTLRLFWTLLSKQEEMVQKFVEEVLRI--NYKFLMSPIKTEQRQ-----PSMMTRMYIEQ 115
Query: 582 -----GDKENITK--VSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLE 634
D + K VS ++R+ + ++ AK ++IDG
Sbjct: 116 RDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAK------NVLIDG------------ 157
Query: 635 KMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEAD-----I 689
+ G+GKT +A+ D + + D +
Sbjct: 158 -V----------------------------LGSGKTWVAL-DVCLSYKVQCKMDFKIFWL 187
Query: 690 GVG--------ISGVEGMQAVMSSDYAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKN 741
+ + ++ + + ++ ++ + L H + ++ Y+N
Sbjct: 188 NLKNCNSPETVLEMLQKLLYQIDPNWT-SRSDHSSNIKL-RIHSIQAELRRLLKSKPYEN 245
Query: 742 -L-------------TFGF---TLF--WYEAYASFSGRPAYNDWYMSCYNVFFT---SLP 779
L F L ++ F + +++ T
Sbjct: 246 CLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305
Query: 780 VIA--LGVFDQDVSARLCLKYPL---LYQEGVQNILFSWPRILGWMSNGVLSAIIIFF-- 832
++ L QD+ + P + E +++ L +W + + + I
Sbjct: 306 LLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365
Query: 833 ---------FTTNSIFNQAFRKDGHAVDYEVLGVAMYSSVVWA------VNCQMALSINY 877
F S+ F H + +L S++W V + Y
Sbjct: 366 LEPAEYRKMFDRLSV----FPPSAH-IPTILL------SLIWFDVIKSDVMVVVNKLHKY 414
Query: 878 FTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEA-----------CAPSIL-- 924
+ +I++ I+L + + ++ +V+ P L
Sbjct: 415 SLVEKQPKE-STISIPSIYLEL--KVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ 471
Query: 925 YWLTTLLVVVSTLLPYFLYRAFQTR----FRPMYHDL--IQRQRLEGSETEISSQTEVSS 978
Y+ + + + L FR ++ D ++ Q++ T ++ + +
Sbjct: 472 YFY--------SHIGHHLKNIEHPERMTLFRMVFLDFRFLE-QKIRHDSTAWNASGSILN 522
Query: 979 ELPAQVEIKMQHLKAN 994
L Q++ ++ N
Sbjct: 523 TL-QQLKFYKPYICDN 537
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 1e-07
Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 40/185 (21%)
Query: 526 ECIDKLAQ--AGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGD 583
+ I + + A + L + ++I ++ + ++ L
Sbjct: 21 DNIINIMKTFAPPEWMALKDGVLSKTLSI-------KEGVGRMF---------GLLPSSL 64
Query: 584 KENITKVSLESVTKQIREGISQ-VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI 642
KE IT LE IREG + V E ++ F ++ G +DF + LE + I
Sbjct: 65 KEEITSFVLEDAK--IREGFREFVAFINEHEIPFYVISGG--MDFFVYPLLEGIVEKDRI 120
Query: 643 -----------------DCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQ 685
C K V + + + IGD DV +
Sbjct: 121 YCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAK 180
Query: 686 EADIG 690
+D+
Sbjct: 181 LSDLC 185
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 33/181 (18%), Positives = 59/181 (32%), Gaps = 39/181 (21%)
Query: 524 VPECIDKLAQ-AGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQG 582
VPE A+ GI T + Y L++Q ++ L++ G
Sbjct: 14 VPEIWIAFAEKTGIDALKAT---TRDIPD--YD-VLMKQRLR------------ILDEHG 55
Query: 583 DKENITKVSLESVTKQIR--EGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLD- 639
K ++ V ++ EG + + ++ D + ++
Sbjct: 56 LKLGD----IQEVIATLKPLEGAVEFVDWLRERFQVVILSDT--FYEFSQPLMRQLGFPT 109
Query: 640 -----LAID----CASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIG 690
L ID + PK++++ K +A GD ND ML EA G
Sbjct: 110 LLCHKLEIDDSDRVVGYQLRQKDPKRQSV--IAFKSLYYRVIAAGDSYNDTTMLSEAHAG 167
Query: 691 V 691
+
Sbjct: 168 I 168
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 669 KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMS-SDYAIAQFRFLERLL 719
K + IGDGA D+ AD +G G Q V + + I F L L
Sbjct: 172 KKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGEL 223
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 2e-05
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 671 TLAIGDGANDVGMLQEADIGVG 692
T+A+GDGAND+ M ++A + +
Sbjct: 162 TVAVGDGANDISMFKKAGLKIA 183
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 2e-05
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 671 TLAIGDGANDVGMLQEADIGVG 692
TL +GDGAND+ M + A I +
Sbjct: 161 TLVVGDGANDLSMFKHAHIKIA 182
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 4e-05
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 671 TLAIGDGANDVGMLQEADIGVG 692
T+A+GDGAND+ M+ A +GV
Sbjct: 264 TVAVGDGANDLVMMAAAGLGVA 285
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 4e-05
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 671 TLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERLL 719
+A GDGAND+ ML+ A G+ ++ + I + E LL
Sbjct: 265 IIACGDGANDLPMLEHAGTGIAWKAKPVVRE--KIHHQI-NYHGFELLL 310
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 5e-05
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 671 TLAIGDGANDVGMLQEADIGVG 692
T+A+GDGAND+ ML A +G+
Sbjct: 342 TVAVGDGANDIDMLAAAGLGIA 363
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* Length = 259 | Back alignment and structure |
|---|
Score = 44.6 bits (105), Expect = 8e-05
Identities = 25/225 (11%), Positives = 60/225 (26%), Gaps = 39/225 (17%)
Query: 526 ECIDKLAQAGIKVWVLTGDKMETAIN--------IGYACSLLRQEMKQIVITLDSPDMEA 577
E +++L G+ V +T K + I L V
Sbjct: 23 EALERLRALGVPVVPVTA-KTRKEVEALGLEPPFIVENGGGLYLPRDWPVRAGRPKGGYR 81
Query: 578 LEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMF 637
+ + L I V + ++ A ++ ++
Sbjct: 82 VVSLAWPYRKVRARLREAEALAGRPILGYGDLTAEAVARLTGLSREAARRAKAREYDETL 141
Query: 638 LDLAIDCASVICCRSS--------------PKQ-------KALVTRLVKGTGK-TTLAIG 675
+ + +V+ + K L + +G
Sbjct: 142 VLCPEEVEAVLEALEAVGLEWTHGGRFYHAAKGADKGRAVARLRALWPDPEEARFAVGLG 201
Query: 676 DGANDVGMLQEADIGVGISGVEGMQAVMSSD--------YAIAQF 712
D ND+ + + D+ V + + + V+++ YA+ ++
Sbjct: 202 DSLNDLPLFRAVDLAVYVGRGDPPEGVLATPAPGPEGFRYAVERY 246
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A Length = 249 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 4e-04
Identities = 9/39 (23%), Positives = 15/39 (38%)
Query: 657 KALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISG 695
K L+ + + A+GD ND M + D +
Sbjct: 185 KILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGS 223
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1000 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.84 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.88 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.84 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.75 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.38 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.01 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.93 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.88 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.84 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.8 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.79 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.79 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.76 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.76 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.72 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.71 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.71 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.66 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.66 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.65 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.61 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.61 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.58 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.57 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.55 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.52 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.51 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.5 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.47 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.45 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.44 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.39 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.36 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.35 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.34 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.32 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.31 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.3 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.28 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.28 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.27 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.24 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.22 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.2 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.19 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.19 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.18 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.1 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.09 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.06 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.06 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.04 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.02 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.01 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.01 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.0 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.99 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.96 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.95 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.93 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.93 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.92 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.91 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.91 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.9 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 97.88 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.86 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.84 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.83 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 97.81 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.8 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.79 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.78 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.78 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.78 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.76 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.74 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.74 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.72 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.69 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.66 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.64 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.64 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.63 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.58 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.55 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.54 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.54 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.53 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.51 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.5 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 97.47 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.46 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.41 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.39 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.35 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.34 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.33 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.3 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.3 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.27 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.26 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.24 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.12 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.11 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.1 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.1 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.94 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.73 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 96.71 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.66 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.53 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.52 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.46 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.44 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.41 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.38 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.34 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.15 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 95.93 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 95.91 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.77 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 95.65 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 95.64 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.55 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.34 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.25 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 95.03 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 94.92 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 94.87 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 94.82 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 94.72 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 94.56 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 94.48 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 94.3 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 93.86 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 93.43 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 93.12 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 92.28 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 91.85 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 90.88 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 90.7 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 89.86 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 87.98 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 86.74 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 81.26 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 80.61 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-87 Score=844.26 Aligned_cols=726 Identities=18% Similarity=0.189 Sum_probs=554.3
Q ss_pred cCCCCCeEEeceeecCCCeEEEEEEEecchh---hHhhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 001888 58 PLSPQQILLRDSKLKNTDYVYGVVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIET 134 (1000)
Q Consensus 58 ~l~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~T---ki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~ 134 (1000)
|++.+|++|+||.+.+ |.+.|+|++||.+| |+..+....+.+++|+++.+++++..+..+.++++++.++++.++.
T Consensus 246 ~~~~~n~~f~GT~v~~-G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (1034)
T 3ixz_A 246 PLETRNIAFFSTMCLE-GTAQGLVVNTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIG 324 (1034)
T ss_pred ccccccceecceeEEe-ecceEEEEeehhhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4456799999999996 99999999999999 5666667777889999999999999998888888877766543321
Q ss_pred ccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccccccCCCc
Q 001888 135 KRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKP 214 (1000)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~ 214 (1000)
. .| ...+..++.+++.+||++||++++++.++++. +| ++++
T Consensus 325 ~---------~~--------------------~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~------rm----ak~~ 365 (1034)
T 3ixz_A 325 Y---------TF--------------------LRAMVFFMAIVVAYVPEGLLATVTVCLSLTAK------RL----ASKN 365 (1034)
T ss_pred c---------hH--------------------HHHHHHHHHHHHheeccccHHHHHHHHHHHHH------HH----hhCC
Confidence 1 12 34678889999999999999999999999988 66 8899
Q ss_pred ceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCCCCccc
Q 001888 215 ARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIV 294 (1000)
Q Consensus 215 ~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1000)
++||+++++|+||++++||||||||||+|+|+|+++++++..|..+....
T Consensus 366 ~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~------------------------------ 415 (1034)
T 3ixz_A 366 CVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTED------------------------------ 415 (1034)
T ss_pred eEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCccc------------------------------
Confidence 99999999999999999999999999999999999999887654321000
Q ss_pred cCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCC--ceEEeeCChhHHHHHHHHHHcCcEEE
Q 001888 295 ESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETG--EISYEAESPDEAAFVIAAREVGFQFF 372 (1000)
Q Consensus 295 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~--~~~~~~~sp~e~al~~~a~~~g~~~~ 372 (1000)
..+. ..+...+..+.+++++++||++....+.+.. ......++|+|.|+++++...+....
T Consensus 416 -----~~~~------------~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~ 478 (1034)
T 3ixz_A 416 -----QSGQ------------TFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAM 478 (1034)
T ss_pred -----cccc------------ccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChH
Confidence 0000 0011234567899999999999875432211 11234589999999999988764321
Q ss_pred eecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcC---CCcEEEEEccchhHhHHHHhcc---------
Q 001888 373 GSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNP---ENQLLLLCKGADSVMFERLSKH--------- 440 (1000)
Q Consensus 373 ~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~--------- 440 (1000)
. .+..|+++.++||+|+||||+++++.. ++++++|+|||||.|+++|+..
T Consensus 479 ~------------------~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l 540 (1034)
T 3ixz_A 479 G------------------YRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPL 540 (1034)
T ss_pred H------------------HHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecC
Confidence 1 256788999999999999999988754 3679999999999999999742
Q ss_pred ChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccc
Q 001888 441 GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKL 520 (1000)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~l 520 (1000)
+++.++.+.+.+++++.+|+|||++|||.++++++.++... ++ +..+.+|+||+|+|+++++||+
T Consensus 541 ~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~----------~~-----~~~~~~e~~l~~lGlv~i~Dp~ 605 (1034)
T 3ixz_A 541 DEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAF----------DV-----EAMNFPTSGLSFAGLVSMIDPP 605 (1034)
T ss_pred CHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhccccccc----------ch-----hhhhccccCcEEEEEEeccCCC
Confidence 34567788999999999999999999999988765443211 11 1124568999999999999999
Q ss_pred cCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHH
Q 001888 521 QKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIR 600 (1000)
Q Consensus 521 r~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (1000)
|++++++|++|+++||++||+|||+..||.++|+++|+..++...+ .. . .....
T Consensus 606 r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i---------~~------------~-----~~~~~ 659 (1034)
T 3ixz_A 606 RATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETV---------ED------------I-----AARLR 659 (1034)
T ss_pred chhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHH---------HH------------H-----HHhhC
Confidence 9999999999999999999999999999999999999976432100 00 0 00000
Q ss_pred hhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccC
Q 001888 601 EGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGAND 680 (1000)
Q Consensus 601 ~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND 680 (1000)
.... ..........+++|..+.....+++. +....++..+|+|++|+||.++|+.+++.|++|+|+|||.||
T Consensus 660 ~~~~----~~~~~~~~~~~~~g~~l~~~~~~~l~----~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND 731 (1034)
T 3ixz_A 660 VPVD----QVNRKDARACVINGMQLKDMDPSELV----EALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVND 731 (1034)
T ss_pred ccch----hccccccceeEEecHhhhhCCHHHHH----HHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHh
Confidence 0000 01112234568888888765544443 334455667999999999999999999899999999999999
Q ss_pred hHHhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 001888 681 VGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFS 758 (1000)
Q Consensus 681 ~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~fs 758 (1000)
++||+.||+||||+++....+|++||+++.+ |..+..+ +.|||++|.|+++++.|.+++|+..+++.+++.++.
T Consensus 732 ~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~a-i~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~--- 807 (1034)
T 3ixz_A 732 SPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTG-VEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVS--- 807 (1034)
T ss_pred HHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 9999999999999744455599999999998 4446666 889999999999999999999999999999988774
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccc-cCCccchhhHHHh-hHHHHHHHHHHHHHHHh
Q 001888 759 GRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGV-QNILFSWPRILGW-MSNGVLSAIIIFFFTTN 836 (1000)
Q Consensus 759 ~~~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 836 (1000)
...++.++|++|+|++++.+|+++++.++ ++++.|.+.|+ .+ +..+++.+.++.. +..|++++++.|+.+++
T Consensus 808 ~~~pl~~~qiL~inl~~d~~palal~~e~--~~~~~m~~~Pr----~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~ 881 (1034)
T 3ixz_A 808 VPLPLGCITILFIELCTDIFPSVSLAYEK--AESDIMHLRPR----NPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFT 881 (1034)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhcCC--CChhhhhCCCC----CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23469999999999999999999998864 34445555565 34 4678888877664 45588888777766655
Q ss_pred hhccccccC----------C-----------Ccc-------cchhhhhHHHHHHHHHHHHHHHHHHhhc-----c--hhH
Q 001888 837 SIFNQAFRK----------D-----------GHA-------VDYEVLGVAMYSSVVWAVNCQMALSINY-----F--TWI 881 (1000)
Q Consensus 837 ~~~~~~~~~----------~-----------g~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~~-----~--~~~ 881 (1000)
.+....+.. . |.. .......++.|+++++.+.+..+. .++ | .++
T Consensus 882 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~-~r~~~~s~~~~~~~ 960 (1034)
T 3ixz_A 882 AMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLI-RKTRRLSAFQQGFF 960 (1034)
T ss_pred HHhhcCCccccccccccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHh-hccCCCcccccCCc
Confidence 432111100 0 000 001235688888888877666543 222 2 235
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 001888 882 QHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMY 954 (1000)
Q Consensus 882 ~~~~~~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~~~~~~ll~~~i~k~~~~~~~p~~ 954 (1000)
.|.++|+++++.+++++++.++|. ++. +|++.++++..|+.++.++++.++.+++.|++.|++.+.-
T Consensus 961 ~N~~l~~~~~~~~~l~~~~~~~p~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~~~~~~ 1027 (1034)
T 3ixz_A 961 RNRILVIAIVFQVCIGCFLCYCPG-MPN-----IFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCCPGSW 1027 (1034)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhh-HHH-----HhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 788889999999999888888883 333 6778899999999999999999999999999998875443
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-86 Score=841.39 Aligned_cols=739 Identities=20% Similarity=0.224 Sum_probs=538.3
Q ss_pred cCCCCCeEEeceeecCCCeEEEEEEEecchhhH---hhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 001888 58 PLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIET 134 (1000)
Q Consensus 58 ~l~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki---~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~ 134 (1000)
+.+.+|++|+||.+.+ |+++|+|++||++|++ .+....++.+++|+++.+++++..+.++++++|++.++++..+.
T Consensus 202 ~~~~~~~v~~GT~v~~-G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (995)
T 3ar4_A 202 NQDKKNMLFSGTNIAA-GKALGIVATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHF 280 (995)
T ss_dssp GGGCTTEECTTCEEEE-CEEEEEEEECGGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGG
T ss_pred cccccceEecCCEEEc-ceEEEEEEEcCcchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4577899999999997 9999999999999965 45556677889999999999999999988888887766543211
Q ss_pred ccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccccccCCCc
Q 001888 135 KRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKP 214 (1000)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~ 214 (1000)
...... ..|+ ......|..++.+++.+|||+||++++++.++++. +| ++++
T Consensus 281 ~~~~~~---~~~~----------------~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~------~m----a~~~ 331 (995)
T 3ar4_A 281 NDPVHG---GSWI----------------RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTR------RM----AKKN 331 (995)
T ss_dssp GSCSSS---SCHH----------------HHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHH------HH----HHTT
T ss_pred cccccc---chHH----------------HHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHH------Hh----ccCC
Confidence 100000 0121 12234566888999999999999999999998887 66 7789
Q ss_pred ceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCCCCccc
Q 001888 215 ARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIV 294 (1000)
Q Consensus 215 ~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1000)
+++|+++++|+||++++||||||||||+|+|+|+++++.+..++..... .....+.. .
T Consensus 332 ~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~--------~~~~~~~~---~----------- 389 (995)
T 3ar4_A 332 AIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSL--------NEFSITGS---T----------- 389 (995)
T ss_dssp EEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEE--------EEEEECCS---S-----------
T ss_pred cEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCccccc--------ceeeccCC---C-----------
Confidence 9999999999999999999999999999999999998865443210000 00000000 0
Q ss_pred cCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHcCcEEEee
Q 001888 295 ESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGS 374 (1000)
Q Consensus 295 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~ 374 (1000)
..+ .... ...+.......++.++.++.++++||++.++.++..+... ..+||+|.||++++++.|+ +..
T Consensus 390 -~~p-~~~~------~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~-~~g~p~E~Al~~~a~~~g~-~~~- 458 (995)
T 3ar4_A 390 -YAP-EGEV------LKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYE-KVGEATETALTTLVEKMNV-FNT- 458 (995)
T ss_dssp -SSS-CCCE------EETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEE-EESCHHHHHHHHHHHHHCT-TCC-
T ss_pred -cCC-cccc------ccccccccccccHHHHHHHHHHHHcCCCcccccCCCCcee-ecCCccHHHHHHHHHHcCC-ccc-
Confidence 000 0000 0000001112334577899999999999875443223222 3489999999999999887 211
Q ss_pred cCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCC-----cEEEEEccchhHhHHHHhcc---------
Q 001888 375 SQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPEN-----QLLLLCKGADSVMFERLSKH--------- 440 (1000)
Q Consensus 375 ~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~~--------- 440 (1000)
....+................|++++++||+|+||||||+++.++| ++.+|+||||+.|+++|+..
T Consensus 459 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l 538 (995)
T 3ar4_A 459 EVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPM 538 (995)
T ss_dssp CCTTSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEEC
T ss_pred cccccccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccC
Confidence 0000000000000000124579999999999999999999997665 68999999999999999752
Q ss_pred ChhhHHHHHHHHHHH--HHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecc
Q 001888 441 GQQFEAETRRHINRY--AEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVED 518 (1000)
Q Consensus 441 ~~~~~~~~~~~~~~~--~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D 518 (1000)
+++.++++.++++++ +.+|+|||++|||+++.++. ...+ .+ ...++.+|+|++|+|+++++|
T Consensus 539 ~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~----------~~~~-~~-----~~~~~~~e~~l~~lG~~~i~D 602 (995)
T 3ar4_A 539 TGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE----------EMVL-DD-----SSRFMEYETDLTFVGVVGMLD 602 (995)
T ss_dssp CHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGG----------GCCT-TC-----GGGHHHHTCSEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHhhhccceEEEEEEEecCcccc----------cccc-cc-----chhhhhhccCcEEEEEEeecC
Confidence 234567788899999 99999999999999864310 0000 01 013467799999999999999
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++|++++++|+.|+++||++||+|||+..||.++|+++|+...+..+ .
T Consensus 603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i-----~--------------------------- 650 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEV-----A--------------------------- 650 (995)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCC-----T---------------------------
T ss_pred CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcc-----c---------------------------
Confidence 99999999999999999999999999999999999999997543210 0
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
..+++|.+++.+.++++.+.+ . +..+|||++|+||.++|+.+++.|+.|+|+|||.
T Consensus 651 ------------------~~~~~g~~~~~l~~~~~~~~~----~--~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ 706 (995)
T 3ar4_A 651 ------------------DRAYTGREFDDLPLAEQREAC----R--RACCFARVEPSHKSKIVEYLQSYDEITAMTGDGV 706 (995)
T ss_dssp ------------------TTEEEHHHHHTSCHHHHHHHH----H--HCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSG
T ss_pred ------------------ceEEEchhhhhCCHHHHHHHH----h--hCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCc
Confidence 014455554433332333222 2 3469999999999999999988899999999999
Q ss_pred cChHHhhhcCcccccc-CccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 001888 679 NDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYA 755 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~~-g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~ 755 (1000)
||++||++||+||||+ |.+ .|+++||+++.+ |..+.++ +.|||++|.|+++++.|.+++|+..+++.+++.++.
T Consensus 707 ND~~alk~Advgiamg~g~~--~ak~aAd~vl~~~~~~~i~~~-i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g 783 (995)
T 3ar4_A 707 NDAPALKKAEIGIAMGSGTA--VAKTASEMVLADDNFSTIVAA-VEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG 783 (995)
T ss_dssp GGHHHHHHSTEEEEETTSCH--HHHHTCSEEETTCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHCCeEEEeCCCCH--HHHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999995 333 389999999976 7778888 899999999999999999999999998888887763
Q ss_pred hcCCccchhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccccCCccchhhHHHhhHHHHHHHHHHHHHHH
Q 001888 756 SFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTT 835 (1000)
Q Consensus 756 ~fs~~~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 835 (1000)
...++.++|++|+|++++.+|++++++++. +++.+.++|+ .++..+++++.++.|++.|+++++++++.++
T Consensus 784 ---~~~pl~~~qil~~nl~~d~~p~l~l~~~~~--~~~~m~~~P~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ 854 (995)
T 3ar4_A 784 ---LPEALIPVQLLWVNLVTDGLPATALGFNPP--DLDIMDRPPR----SPKEPLISGWLFFRYMAIGGYVGAATVGAAA 854 (995)
T ss_dssp ---CCCSSCHHHHHHHHHTTTHHHHHHHTTCCC--CTTGGGSCCC----CTTCCSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CcchHHHHHHHHHHHHHHHHHHHhhccCCC--ChhHHhCCCC----CCcccccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 224688999999999999999999998764 3456666665 4567899999999999999999988766543
Q ss_pred hhhc-cc-c--ccC-----------CCcc-----cc---hhhhhHHHHHHHHHHHHHHHHHHhhc-------chhHHHHH
Q 001888 836 NSIF-NQ-A--FRK-----------DGHA-----VD---YEVLGVAMYSSVVWAVNCQMALSINY-------FTWIQHFF 885 (1000)
Q Consensus 836 ~~~~-~~-~--~~~-----------~g~~-----~~---~~~~~~~~~~~~v~~~~~~~~~~~~~-------~~~~~~~~ 885 (1000)
+.+. .. . ... ++.. .+ .....|++|+++++++.++.+. .++ ...+.+.+
T Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~-~r~~~~~~~~~~~~~n~~ 933 (995)
T 3ar4_A 855 WWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALN-SLSENQSLMRMPPWVNIW 933 (995)
T ss_dssp HHTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHT-TSCSSCCTTTSCGGGCHH
T ss_pred HHHHhcccccccccchhccccccccccccccccccccccchhhhhHHHHHHHHHHHHHHHH-hhccccchhccCCccCHH
Confidence 3221 10 0 000 0000 01 1235788899988887777643 211 12345666
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 001888 886 IWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRF 950 (1000)
Q Consensus 886 ~~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~~~~~~ll~~~i~k~~~~~~ 950 (1000)
+++++++.++++++..++|. ++ .+|+..++++..|+.+++++++.++++++.|++.|.|
T Consensus 934 l~~~~~~~~~l~~~~~~~p~-~~-----~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 992 (995)
T 3ar4_A 934 LLGSICLSMSLHFLILYVDP-LP-----MIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNY 992 (995)
T ss_dssp HHHHHHHHHHHHHHHHHSTH-HH-----HHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHH-HH-----HhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 77777777776666667762 22 2566778899999999999999999999999998866
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-85 Score=827.20 Aligned_cols=724 Identities=19% Similarity=0.210 Sum_probs=544.5
Q ss_pred cCCCCCeEEeceeecCCCeEEEEEEEecchhhH---hhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 001888 58 PLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIET 134 (1000)
Q Consensus 58 ~l~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki---~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~ 134 (1000)
|++.+|++|+||.+.+ |+++|+|++||++|++ +++...++.+++|+++.+++++.+++++.+++|++.+++.. |.
T Consensus 241 ~~~~~n~v~~GT~v~~-G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~-~~ 318 (1028)
T 2zxe_A 241 PLETRNIAFFSTNCVE-GTARGVVVYTGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSL-IL 318 (1028)
T ss_dssp TTTCSSEECTTCEEEE-EEEEEEEEECGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HT
T ss_pred cccccceEEeCceEEc-ceEEEEEEEeccccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hc
Confidence 5677899999999997 9999999999999954 55666778889999999999999999998888887766533 22
Q ss_pred ccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccccccCCCc
Q 001888 135 KRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKP 214 (1000)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~ 214 (1000)
+. .| ...+..++.+++.+|||+||++++++.++++. +| ++++
T Consensus 319 ~~--------~~--------------------~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~------~m----ak~~ 360 (1028)
T 2zxe_A 319 GY--------SW--------------------LEAVIFLIGIIVANVPEGLLATVTVCLTLTAK------RM----ARKN 360 (1028)
T ss_dssp TC--------CH--------------------HHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHH------HH----HTTT
T ss_pred cC--------cH--------------------HHHHHHHHHHHHHHcCchHHHHHHHHHHHHHH------HH----hhCC
Confidence 11 23 22566677888899999999999999999988 66 7899
Q ss_pred ceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCCCCccc
Q 001888 215 ARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIV 294 (1000)
Q Consensus 215 ~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1000)
++||+++++|+||++++||||||||||+|+|+|+++++++..|.....+
T Consensus 361 ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~------------------------------- 409 (1028)
T 2zxe_A 361 CLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE------------------------------- 409 (1028)
T ss_dssp EEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCT-------------------------------
T ss_pred ceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCC-------------------------------
Confidence 9999999999999999999999999999999999999988766422100
Q ss_pred cCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCc--eEEeeCChhHHHHHHHHHHcCcEEE
Q 001888 295 ESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGE--ISYEAESPDEAAFVIAAREVGFQFF 372 (1000)
Q Consensus 295 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~--~~~~~~sp~e~al~~~a~~~g~~~~ 372 (1000)
. ..+.. .+..++..+.++.++++||++..+...+... ..+..+||+|.||+++|++.|....
T Consensus 410 -~---~~~~~------------~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~ 473 (1028)
T 2zxe_A 410 -N---QSGAA------------FDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQ 473 (1028)
T ss_dssp -T---CCSCC------------CCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHH
T ss_pred -C---ccccc------------cccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHH
Confidence 0 00000 0112345668899999999998764322111 1123589999999999987642110
Q ss_pred eecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcC---CCcEEEEEccchhHhHHHHhcc---------
Q 001888 373 GSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNP---ENQLLLLCKGADSVMFERLSKH--------- 440 (1000)
Q Consensus 373 ~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~--------- 440 (1000)
..+..|+++.++||+|+||||+++++.+ ++++++|+||||+.|+++|+..
T Consensus 474 ------------------~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l 535 (1028)
T 2zxe_A 474 ------------------GMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPL 535 (1028)
T ss_dssp ------------------HHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBC
T ss_pred ------------------HHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccC
Confidence 0145688999999999999999999974 5788999999999999999752
Q ss_pred ChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccc
Q 001888 441 GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKL 520 (1000)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~l 520 (1000)
+++.++++.+++++++++|+|||++|||.++++++.++. .. +++ ..+.+|+|++|+|+++++||+
T Consensus 536 ~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~--------~~--~~~-----~~~~~e~~l~~lG~i~i~Dpl 600 (1028)
T 2zxe_A 536 KEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGY--------PF--DAD-----EPNFPTTDLCFVGLMAMIDPP 600 (1028)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTC--------CC--CTT-----TTCSCCSSEEEEEEEEEECCB
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEEEEecCcccccccc--------cc--chh-----hhhhhhcCeEEEeeeccCCCC
Confidence 234567888999999999999999999999765322110 00 000 012357899999999999999
Q ss_pred cCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHH
Q 001888 521 QKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIR 600 (1000)
Q Consensus 521 r~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (1000)
|++++++|++|+++||++||+|||+..||.++|++||+...+...+ .. . .....
T Consensus 601 r~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i---------~~---------~--------~~~~~ 654 (1028)
T 2zxe_A 601 RAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETI---------ED---------I--------AARLN 654 (1028)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCH---------HH---------H--------HHHTT
T ss_pred ChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhH---------HH---------H--------HhhcC
Confidence 9999999999999999999999999999999999999975433210 00 0 00000
Q ss_pred hhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccC
Q 001888 601 EGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGAND 680 (1000)
Q Consensus 601 ~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND 680 (1000)
...... ........+++|.++..+.++++ .++...++.++|||++|+||..+|+.+++.|++|+|+|||.||
T Consensus 655 ~~~~~~----~~~~~~~~vi~G~~l~~~~~~~l----~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND 726 (1028)
T 2zxe_A 655 IPIGQV----NPRDAKACVVHGSDLKDLSTEVL----DDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVND 726 (1028)
T ss_dssp CCGGGS----CGGGCCEEEEEHHHHTTCCHHHH----HHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGG
T ss_pred cchhhc----cccccceEEEEcHHhhhCCHHHH----HHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcch
Confidence 000000 11122356889988776544333 3444556668999999999999999998889999999999999
Q ss_pred hHHhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 001888 681 VGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFS 758 (1000)
Q Consensus 681 ~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~fs 758 (1000)
++||++|||||||+.+....++++||+++.+ |+.+.++ +.|||++|.|+++++.|.+++|+..+++.+++.++.
T Consensus 727 ~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~-i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~--- 802 (1028)
T 2zxe_A 727 SPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGN--- 802 (1028)
T ss_dssp HHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHH-HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHC---
T ss_pred HHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---
Confidence 9999999999999622223389999999987 7779888 899999999999999999999999998888887764
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccccCCccchhhHHH-hhHHHHHHHHHHHHHHHhh
Q 001888 759 GRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILG-WMSNGVLSAIIIFFFTTNS 837 (1000)
Q Consensus 759 ~~~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 837 (1000)
...+++++|++|+|++++.+|+++++..+ +.++.+.++|+ ..+.+++++++.++. |+..|++++++.|+.+++.
T Consensus 803 ~~~~l~~~qil~inl~~d~~pa~al~~e~--~~~~~m~~~Pr---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 877 (1028)
T 2zxe_A 803 VPLPLGTVTILCIDLGTDMVPAISLAYEQ--AESDIMKRQPR---NPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVI 877 (1028)
T ss_dssp CCCSSCHHHHHHHHTTTTHHHHHHGGGCC--CSSCGGGSCCC---CTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHhccCc--cchhhhccCCC---CcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22458999999999999999999998653 34455555564 122348999998877 6688999999888766553
Q ss_pred hccccc-------------cC--------CCccc-------chhhhhHHHHHHHHHHHHHHHHHH-hhcchh----HHHH
Q 001888 838 IFNQAF-------------RK--------DGHAV-------DYEVLGVAMYSSVVWAVNCQMALS-INYFTW----IQHF 884 (1000)
Q Consensus 838 ~~~~~~-------------~~--------~g~~~-------~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~----~~~~ 884 (1000)
+....+ .. .|... ......|++|+++++.+.+..+.. ++..++ +.|.
T Consensus 878 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~ 957 (1028)
T 2zxe_A 878 LAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNK 957 (1028)
T ss_dssp HHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCH
T ss_pred HhccCcccchhhcccchhccccccccccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCH
Confidence 321110 00 01100 012467899999998887776532 222222 3466
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 001888 885 FIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRF 950 (1000)
Q Consensus 885 ~~~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~~~~~~ll~~~i~k~~~~~~ 950 (1000)
++++++++.++++++..++|. ++. +|+..++++..|+.++.++++.++.+++.|++.|++
T Consensus 958 ~l~~~~~~~~~l~~~~~~~p~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 958 ILIFGLFEETALAAFLSYCPG-TDV-----ALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHSTT-HHH-----HTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhhh-HHh-----hhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 777788888888888888873 222 556788999999999999999999999999988765
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-77 Score=736.69 Aligned_cols=636 Identities=16% Similarity=0.168 Sum_probs=470.8
Q ss_pred CCccccCCC--CCeEEeceeecCCCeEEEEEEEecchhhHhh---cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001888 53 EGKQYPLSP--QQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ---NATDPPSKRSKIERKMDKIVYLLFSTLILISSTGS 127 (1000)
Q Consensus 53 ~~~~~~l~~--~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki~~---n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~ 127 (1000)
+||+.|+.+ +|.+|+||.+.+ |++.++|++||.+|++.+ ....++.+++++++.++++..++++++++++++.+
T Consensus 231 TGES~PV~K~~gd~v~sGT~v~~-G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~ 309 (920)
T 1mhs_A 231 TGESLAVDKHKGDQVFASSAVKR-GEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVW 309 (920)
T ss_dssp SSCCCCEECCSSCEECSCBCCSC-CCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcceEecCCCeeecCceEec-ceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 489988855 699999999995 999999999999997654 34556678899999999999988887777766554
Q ss_pred HhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccc
Q 001888 128 VFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMY 207 (1000)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~ 207 (1000)
+.+.+ . . .. +...+..++++++.+|||+||++++++.++++. +|
T Consensus 310 ~~~~~-~--~------~~--------------------~~~~l~~av~llV~aiP~aLp~~vti~la~g~~------~m- 353 (920)
T 1mhs_A 310 VSSFY-R--S------NP--------------------IVQILEFTLAITIIGVPVGLPAVVTTTMAVGAA------YL- 353 (920)
T ss_dssp HTTTT-T--T------CC--------------------HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH------HH-
T ss_pred HHHHh-c--C------Cc--------------------HHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHH------HH-
Confidence 43211 0 0 01 133677889999999999999999999999888 56
Q ss_pred cccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCC
Q 001888 208 YEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAP 287 (1000)
Q Consensus 208 ~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1000)
+++++++|+++++|+||++++||||||||||+|+|+|.+++..+. +.
T Consensus 354 ---ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g-~~----------------------------- 400 (920)
T 1mhs_A 354 ---AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG-VD----------------------------- 400 (920)
T ss_dssp ---HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSC-CC-----------------------------
T ss_pred ---HhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCC-CC-----------------------------
Confidence 778999999999999999999999999999999999987643210 00
Q ss_pred CCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHc
Q 001888 288 GLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREV 367 (1000)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~ 367 (1000)
+ .+++.+.++|+.... .++||+|.|+++++++.
T Consensus 401 -------------------------------~-----~~ll~~a~l~~~~~~-----------~~~~P~e~Al~~~~~~~ 433 (920)
T 1mhs_A 401 -------------------------------P-----EDLMLTACLAASRKK-----------KGIDAIDKAFLKSLKYY 433 (920)
T ss_dssp -------------------------------C-----THHHHHHHHSCCCSS-----------CSCCSHHHHHHHHHHHS
T ss_pred -------------------------------H-----HHHHHHHHHhcCCcc-----------cCCChHHHHHHHHHHhc
Confidence 0 134566778875411 12499999999999876
Q ss_pred CcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhcc---Chhh
Q 001888 368 GFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH---GQQF 444 (1000)
Q Consensus 368 g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---~~~~ 444 (1000)
+... .....|++++.+||+|.||||+++++.++|+.++|+||||+.++++|... +++.
T Consensus 434 ~~~~-------------------~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~ 494 (920)
T 1mhs_A 434 PRAK-------------------SVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEV 494 (920)
T ss_dssp SSCC-------------------GGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHH
T ss_pred ccch-------------------hhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHH
Confidence 5310 01456888999999999999999998777888899999999999999752 3345
Q ss_pred HHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCCc
Q 001888 445 EAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGV 524 (1000)
Q Consensus 445 ~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v 524 (1000)
++++.+.+++++.+|+||+++|+|.. |++++|+|+++++||+|+++
T Consensus 495 ~~~~~~~~~~~a~~G~RvL~vA~~~~----------------------------------e~~l~~lGli~i~Dp~R~ea 540 (920)
T 1mhs_A 495 DQAYKNKVAEFATRGFRSLGVARKRG----------------------------------EGSWEILGIMPCMDPPRHDT 540 (920)
T ss_dssp HHHHHHHHHHHHTSSCCCCEECCCSS----------------------------------SCSCCCCBBCCCCCCCCHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEEEEecc----------------------------------ccccEEEEEEEEeccccccH
Confidence 67788899999999999999998731 36899999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCc--eEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhh
Q 001888 525 PECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEM--KQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREG 602 (1000)
Q Consensus 525 ~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (1000)
+++|+.|+++||++||+|||+..||.+||+++|+..... ....+++..
T Consensus 541 ~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~------------------------------ 590 (920)
T 1mhs_A 541 YKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGG------------------------------ 590 (920)
T ss_dssp HHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBCC------------------------------
T ss_pred HHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCcc------------------------------
Confidence 999999999999999999999999999999999964210 000000000
Q ss_pred hhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChH
Q 001888 603 ISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVG 682 (1000)
Q Consensus 603 ~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~ 682 (1000)
.++++++... .. +..+++|++|+||.++|+.+|+.|+.|+|+|||.||+|
T Consensus 591 ----------------~~~~~el~~~------------~~--~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDap 640 (920)
T 1mhs_A 591 ----------------DMPGSEVYDF------------VE--AADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAP 640 (920)
T ss_dssp ----------------CGGGGGGGTT------------TT--TTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHH
T ss_pred ----------------cCCHHHHHHH------------Hh--hCeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHH
Confidence 0111111111 11 23489999999999999999888999999999999999
Q ss_pred HhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 001888 683 MLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGR 760 (1000)
Q Consensus 683 mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~fs~~ 760 (1000)
||++|||||||++.. ..|+++||+++.+ |..+.++ +.+||++|+|+++++.|.++.|+.+.....++..+. +.
T Consensus 641 aLk~AdvGIAmg~gt-d~ak~aADiVl~~~~~~~I~~a-i~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~---~~ 715 (920)
T 1mhs_A 641 SLKKADTGIAVEGSS-DAARSAADIVFLAPGLGAIIDA-LKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAIL---NR 715 (920)
T ss_dssp HHHHSSEEEEETTSC-HHHHHSSSEEESSCCSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---SC
T ss_pred HHHhCCcCccccccc-HHHHHhcCeEEcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc
Confidence 999999999996432 3388999999986 7778888 899999999999999999999998754444433333 33
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccccCCccchhhHHHhhHHHHHHHHHHHHHHHhhhcc
Q 001888 761 PAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFN 840 (1000)
Q Consensus 761 ~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (1000)
+ +++.+++|.|++.+. |++++++++.+++ +.|+- ++. .+.+...++.|++.++..++.+++.+..
T Consensus 716 ~-l~~~~il~~~l~~d~-~~lal~~e~~~~~-----~~P~~----~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 780 (920)
T 1mhs_A 716 S-LNIELVVFIAIFADV-ATLAIAYDNAPYS-----QTPVK----WNL----PKLWGMSVLLGVVLAVGTWITVTTMYAQ 780 (920)
T ss_dssp C-CCHHHHHHHHHHHTT-HHHHCCCCCSGGG-----GSCCC----CCS----SSCSSCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred c-CCHHHHHHHHHHHHH-HhhhhcccCcccc-----cCCCC----chH----HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3 677888888888886 9999987653221 33431 111 2233334556777766655544333221
Q ss_pred ccccCCCcccchhhhhHHHHHHHHHHHHHHHHHH-hh--cchhHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHH
Q 001888 841 QAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALS-IN--YFTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVE 917 (1000)
Q Consensus 841 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~--~~~~~~~~~~~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (1000)
. ...+....+....|++|+++++.+.+..+.. +. .|..+.+..+++++++..++..++.++| .|.
T Consensus 781 ~--~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~f~--------- 848 (920)
T 1mhs_A 781 G--ENGGIVQNFGNMDEVLFLQISLTENWLIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWG-WFE--------- 848 (920)
T ss_dssp T--TTCCSSSSSSSHHHHHHHHHHHHHHHHTTSSSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHSSS-STT---------
T ss_pred c--ccccccchhhHHHHHHHHHHHHHHHHHHHHhccchhhhcCchHHHHHHHHHHHHHHHHHHHHhh-hhc---------
Confidence 0 0111111222478999999999887776532 11 1222345556666666666666666665 222
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 001888 918 ACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRF 950 (1000)
Q Consensus 918 ~~~~~~~~w~~~i~~~~~~ll~~~i~k~~~~~~ 950 (1000)
+.++++..|+.+++++++.++..++.|++.++.
T Consensus 849 ~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~ 881 (920)
T 1mhs_A 849 HSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDS 881 (920)
T ss_dssp SCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 456788899999999999999999998766554
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-74 Score=713.37 Aligned_cols=647 Identities=17% Similarity=0.173 Sum_probs=445.7
Q ss_pred ECCccccCCC--CCeEEeceeecCCCeEEEEEEEecchhhHhhc---CCCCCCCccHHHHHHHHHHHHHHH-HHHHHHHH
Q 001888 52 YEGKQYPLSP--QQILLRDSKLKNTDYVYGVVVFTGHDTKVMQN---ATDPPSKRSKIERKMDKIVYLLFS-TLILISST 125 (1000)
Q Consensus 52 ~~~~~~~l~~--~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki~~n---~~~~~~k~s~l~~~~n~~~~~~~~-i~~~~~~i 125 (1000)
++||+.|+.+ +|.+|+||.+.+ |++.++|++||.+|++.+. ... ..+++++++.++++..+++. +.++++++
T Consensus 181 LTGES~Pv~K~~g~~v~~GT~v~~-G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i~~~~~~~~~~~~~~~ 258 (885)
T 3b8c_A 181 LTGESLPVTKHPGQEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAIGMVIE 258 (885)
T ss_dssp TTCCSSCCCBSSCCCCCSCCCCCS-CCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcceEecCCCccccCeEEee-eEEEEEEEEcCcccHHHHHHHHHhc-ccccChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3589999865 599999999997 9999999999999976543 223 46789999999999877443 22223332
Q ss_pred HHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccc
Q 001888 126 GSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRD 205 (1000)
Q Consensus 126 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~ 205 (1000)
.++++.+ .+ ..|. ..+.+++.+++.+|||+||++++++..+++. +
T Consensus 259 ~~~~~~~-~~--------~~~~--------------------~~~~~~v~llv~aiP~aLp~~vti~la~g~~------r 303 (885)
T 3b8c_A 259 IIVMYPI-QR--------RKYR--------------------DGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH------R 303 (885)
T ss_dssp STTTTTT-TC--------SCST--------------------THHHHHHHHTTTTCCSSTTTHHHHTTTHHHH------H
T ss_pred HHHHHHH-cc--------CcHH--------------------HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH------H
Confidence 2222111 11 0121 1577899999999999999999999888877 6
Q ss_pred cccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCC
Q 001888 206 MYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTD 285 (1000)
Q Consensus 206 m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (1000)
| +++++++|+++++|+||++++||||||||||+|+|+|.++.+. .++..
T Consensus 304 ~----ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~~~------------------------- 352 (885)
T 3b8c_A 304 L----SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFCKG------------------------- 352 (885)
T ss_dssp H----TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSCSS-------------------------
T ss_pred H----HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--ccCCC-------------------------
Confidence 6 8899999999999999999999999999999999999643210 01000
Q ss_pred CCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHH
Q 001888 286 APGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAR 365 (1000)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~ 365 (1000)
....+++...++|+... ++||.|.|+++++.
T Consensus 353 ------------------------------------~~~~~ll~~aa~~~~~~-------------~~~p~~~Al~~~~~ 383 (885)
T 3b8c_A 353 ------------------------------------VEKDQVLLFAAMASRVE-------------NQDAIDAAMVGMLA 383 (885)
T ss_dssp ------------------------------------TTHHHHHHHHHHHCCSS-------------SCCSHHHHHHHTTC
T ss_pred ------------------------------------CCHHHHHHHHHHHhCCC-------------CCCchHHHHHHHhh
Confidence 00124667778887531 37999999998764
Q ss_pred HcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhccChhhH
Q 001888 366 EVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFE 445 (1000)
Q Consensus 366 ~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~ 445 (1000)
+.. . ....|++++.+||+|.||||+++++..+|+.++++||||+.++++|+... +.+
T Consensus 384 ~~~----------------~------~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~-~~~ 440 (885)
T 3b8c_A 384 DPK----------------E------ARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASN-DLS 440 (885)
T ss_dssp CTT----------------C------CCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCS-TTT
T ss_pred chh----------------h------HhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCch-hhH
Confidence 210 0 03456788899999999999999987678888999999999999986432 345
Q ss_pred HHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCCcH
Q 001888 446 AETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVP 525 (1000)
Q Consensus 446 ~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v~ 525 (1000)
+++.+.+++++.+|+||+++|+|.+++++ .+..|++++|+|+++++||+|++++
T Consensus 441 ~~~~~~~~~~a~~G~rvl~vA~~~~~~~~--------------------------~~~~e~~l~~lGli~i~Dp~R~~a~ 494 (885)
T 3b8c_A 441 KKVLSIIDKYAERGLRSLAVARQVVPEKT--------------------------KESPGAPWEFVGLLPLFDPPRHDSA 494 (885)
T ss_dssp TTHHHHHHHHTTTTCEEEEECCBCCCSSS--------------------------SSCCCCCCCCCEEEEECCCCCHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEEEEecccccc--------------------------ccccccCcEEEEEEEeecccchhHH
Confidence 56778889999999999999999886532 1345789999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhh
Q 001888 526 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 605 (1000)
Q Consensus 526 e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (1000)
++|+.|+++||+++|+|||+..||.++|+++|+..+.. +..
T Consensus 495 ~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~-----~~~---------------------------------- 535 (885)
T 3b8c_A 495 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-----PSS---------------------------------- 535 (885)
T ss_dssp HHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCS-----TTS----------------------------------
T ss_pred HHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccC-----Ccc----------------------------------
Confidence 99999999999999999999999999999999964210 000
Q ss_pred hcccccCccceEEEEeccchHHHh-hHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChHHh
Q 001888 606 VNSAKESKVTFGLVIDGKSLDFAL-DKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGML 684 (1000)
Q Consensus 606 ~~~~~~~~~~~~lvi~g~~l~~~~-~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~ml 684 (1000)
++.|.+++..+ +.++.+ +.. +..+++|++|+||.++|+.+|+.|+.|+|+|||.||+|||
T Consensus 536 -------------~l~g~~~~~~~~~~~l~~----~~~--~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaL 596 (885)
T 3b8c_A 536 -------------ALLGTHKDANLASIPVEE----LIE--KADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPAL 596 (885)
T ss_dssp -------------SCCBGGGGTTSCCSCHHH----HHH--TSCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHH
T ss_pred -------------eeeccccccccchhHHHH----HHh--hCcEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHH
Confidence 00111111000 001111 111 2348999999999999999988899999999999999999
Q ss_pred hhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCccc
Q 001888 685 QEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPA 762 (1000)
Q Consensus 685 k~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~fs~~~~ 762 (1000)
++|||||||++. ...|+++||+++.+ |..+..+ +.+||.+|+|+++++.|.+..|+..++..++..+ ++. .+
T Consensus 597 k~AdvGIAmg~g-td~ak~aADivl~~~~~~~I~~a-i~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~~--~~~--~~ 670 (885)
T 3b8c_A 597 KKADIGIAVADA-TDAARGASDIVLTEPGLSVIISA-VLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIAL--IWE--FD 670 (885)
T ss_dssp HHSSSCCCCSSS-HHHHGGGCSSCCSSCSHHHHTHH-HHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHHHS--SCS--SC
T ss_pred HhCCEeEEeCCc-cHHHHHhcceeeccCchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--ccC--cC
Confidence 999999999643 23388999999987 6668888 8999999999999999999999875554444433 222 35
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccccCCccchhhHHHhhHHHHHHHHHHHHHHHhhhcccc
Q 001888 763 YNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQA 842 (1000)
Q Consensus 763 ~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (1000)
+++++++|+|++.+..+ +.++....+ .|+ .++...+ .+.+..+++.|++.+++.++++++.+....
T Consensus 671 l~p~~il~i~l~~d~~~-l~l~~~~~~--------~~~----~p~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 736 (885)
T 3b8c_A 671 FSAFMVLIIAILNDGTI-MTISKDRVK--------PSP----TPDSWKL-KEIFATGVVLGGYQAIMTVIFFWAAHKTDF 736 (885)
T ss_dssp SCHHHHHHHHHHHHTTT-CCCCCCCCC--------CSS----CCCSTTT-TTTTTTHHHHHSSTHHHHTTSSSCTTTTTT
T ss_pred cCHHHHHHHHHHHHHHH-HhhcccccC--------ccc----CCcchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 78999999999998875 555442211 121 1222222 444555667788888777665444332111
Q ss_pred ccC-CCcc---cchhhhhHHHHHHHHHHHHHHHHHHhhc--chhHHHH---HHHHHHHHHHHHHHHHhcCCCCCchhhHH
Q 001888 843 FRK-DGHA---VDYEVLGVAMYSSVVWAVNCQMALSINY--FTWIQHF---FIWGSIALWYIFLVVYGSLPPTFSTTAYK 913 (1000)
Q Consensus 843 ~~~-~g~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~---~~~~si~~~~~~~~~~~~~~~~~~~~~~~ 913 (1000)
+.. .|.. .....+.+.+|...++...+. .+..|+ ++++.+. .++..++..++.+++..+.+..
T Consensus 737 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~Rs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 808 (885)
T 3b8c_A 737 FSDTFGVRSIRDNNHELMGAVYLQVSIISQAL-IFVTRSRSWSFVERPGALLMIAFLIAQLIATLIAVYANWE------- 808 (885)
T ss_dssp TTCCCCSSCCGGGTHHHHTTTTTTTSSTTGGG-TTCSSSCTTTSTTSTTTTTSGGGSSTTTTTTSSSSSCCCC-------
T ss_pred cccccCcccccchHHHHHHHHHHHHHHHHHHH-HHHhccCCCCcccCccHHHHHHHHHHHHHHHHHHHhcccc-------
Confidence 100 0100 001123333333222222232 233333 3222222 2222222222222222221111
Q ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 001888 914 VLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFR 951 (1000)
Q Consensus 914 ~~~~~~~~~~~~w~~~i~~~~~~ll~~~i~k~~~~~~~ 951 (1000)
++...++++..|+++++.+++.+++.++.|++.|+..
T Consensus 809 -~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~ 845 (885)
T 3b8c_A 809 -FAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYIL 845 (885)
T ss_dssp -SSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC-
T ss_pred -ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1124567888899888888888999999998876543
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-52 Score=507.45 Aligned_cols=411 Identities=19% Similarity=0.252 Sum_probs=336.5
Q ss_pred CCccccC--CCCCeEEeceeecCCCeEEEEEEEecchh---hHhhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001888 53 EGKQYPL--SPQQILLRDSKLKNTDYVYGVVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGS 127 (1000)
Q Consensus 53 ~~~~~~l--~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~T---ki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~ 127 (1000)
+||+.|+ ..++.+++||.+.+ |++.+.|++||.+| |+.++...++.+++|+|+.++++..++++++++++++++
T Consensus 277 TGES~Pv~K~~gd~v~~Gt~~~~-G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~ 355 (736)
T 3rfu_A 277 TGEPIPVAKEASAKVIGATINQT-GSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSF 355 (736)
T ss_dssp TTCSSCEEECTTCEECTTCEEES-CCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccEEeccCCcCCCceEecc-ceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5888888 45699999999995 99999999999999 556666667778899999999999999999999999988
Q ss_pred HhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccc
Q 001888 128 VFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMY 207 (1000)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~ 207 (1000)
++|.++.... .| ...+.+++.+++.+|||+|+++++++...+.. ++
T Consensus 356 ~~w~~~~~~~-------~~--------------------~~~l~~ai~vlviacPcaL~la~p~a~~~~~~------~~- 401 (736)
T 3rfu_A 356 IVWALLGPQP-------AL--------------------SYGLIAAVSVLIIACPCALGLATPMSIMVGVG------KG- 401 (736)
T ss_dssp HHHHHHCSSS-------ST--------------------THHHHHHHHHHHHHCCSTHHHHHHHHHHHHHH------HH-
T ss_pred HHHHHhCCCc-------hH--------------------HHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHH------HH-
Confidence 8776553211 12 22678899999999999999999999999887 45
Q ss_pred cccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCC
Q 001888 208 YEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAP 287 (1000)
Q Consensus 208 ~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1000)
+++|+++|+++++|+||++|+||||||||||+|+|.|.++..++.. .
T Consensus 402 ---a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~----~-------------------------- 448 (736)
T 3rfu_A 402 ---AQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDFV----E-------------------------- 448 (736)
T ss_dssp ---HHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESSSC----H--------------------------
T ss_pred ---hhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEecCCC----H--------------------------
Confidence 7889999999999999999999999999999999999998733210 0
Q ss_pred CCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHH-HHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHH
Q 001888 288 GLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFR-VLAICHTAIPDVNEETGEISYEAESPDEAAFVIAARE 366 (1000)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~ 366 (1000)
.+++. +.+++ +.++||.+.|+++++++
T Consensus 449 -------------------------------------~~~l~~aa~le---------------~~s~hPla~Aiv~~a~~ 476 (736)
T 3rfu_A 449 -------------------------------------DNALALAAALE---------------HQSEHPLANAIVHAAKE 476 (736)
T ss_dssp -------------------------------------HHHHHHHHHHH---------------HSSCCHHHHHHHHHHHT
T ss_pred -------------------------------------HHHHHHHHHHh---------------hcCCChHHHHHHHHHHh
Confidence 01111 22222 23579999999999988
Q ss_pred cCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhccChhhHH
Q 001888 367 VGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEA 446 (1000)
Q Consensus 367 ~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~ 446 (1000)
.|+.+. ...+|++.+++. +.... +++ .+.+|+++.+.+.... ..
T Consensus 477 ~~~~~~---------------------------~~~~f~~~~g~g-v~~~~-~g~--~~~~G~~~~~~~~~~~-----~~ 520 (736)
T 3rfu_A 477 KGLSLG---------------------------SVEAFEAPTGKG-VVGQV-DGH--HVAIGNARLMQEHGGD-----NA 520 (736)
T ss_dssp TCCCCC---------------------------CCSCCCCCTTTE-EEECS-SSS--CEEEESHHHHHHHCCC-----CH
T ss_pred cCCCcc---------------------------CcccccccCCce-EEEEE-CCE--EEEEcCHHHHHHcCCC-----hh
Confidence 765431 234677666653 22222 333 2445999877553221 23
Q ss_pred HHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCCcHH
Q 001888 447 ETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPE 526 (1000)
Q Consensus 447 ~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v~e 526 (1000)
...+..++++.+|+|++++|+ |.+++|+++++|++|+++++
T Consensus 521 ~~~~~~~~~~~~G~~vl~va~---------------------------------------d~~~~G~i~i~D~i~~~~~~ 561 (736)
T 3rfu_A 521 PLFEKADELRGKGASVMFMAV---------------------------------------DGKTVALLVVEDPIKSSTPE 561 (736)
T ss_dssp HHHHHHHHHHHTTCEEEEEEE---------------------------------------TTEEEEEEEEECCBCSSHHH
T ss_pred HHHHHHHHHHhcCCeEEEEEE---------------------------------------CCEEEEEEEeeccchhhHHH
Confidence 456678899999999999994 67899999999999999999
Q ss_pred HHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhh
Q 001888 527 CIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQV 606 (1000)
Q Consensus 527 ~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (1000)
+|++|+++||+++|+|||+..+|..+|+++|+..
T Consensus 562 aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~---------------------------------------------- 595 (736)
T 3rfu_A 562 TILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK---------------------------------------------- 595 (736)
T ss_dssp HHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC----------------------------------------------
T ss_pred HHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE----------------------------------------------
Confidence 9999999999999999999999999999999831
Q ss_pred cccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChHHhhh
Q 001888 607 NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQE 686 (1000)
Q Consensus 607 ~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~mlk~ 686 (1000)
++++++|++|.++|+.++..|+.|+|+|||.||++||+.
T Consensus 596 -----------------------------------------v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~ 634 (736)
T 3rfu_A 596 -----------------------------------------VVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAK 634 (736)
T ss_dssp -----------------------------------------EECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHH
T ss_pred -----------------------------------------EEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHh
Confidence 888999999999999998889999999999999999999
Q ss_pred cCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHH
Q 001888 687 ADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFT 747 (1000)
Q Consensus 687 AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~ 747 (1000)
||+||+|++.. ..++++||+++.+ ++.+.++ +.+||..++++++++.|.+.+|++.+.+
T Consensus 635 AdvGIAmg~g~-d~a~~~AD~vl~~~~~~~i~~a-i~~sr~t~~~i~qnl~~a~~yN~~~ipl 695 (736)
T 3rfu_A 635 ADIGIAMGTGT-DVAIESAGVTLLHGDLRGIAKA-RRLSESTMSNIRQNLFFAFIYNVLGVPL 695 (736)
T ss_dssp SSEEEEESSSC-SHHHHHCSEEECSCCSTTHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCcc-HHHHHhCCEEEccCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999996433 3389999999975 6678888 8999999999999999999999886544
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-51 Score=502.83 Aligned_cols=413 Identities=19% Similarity=0.235 Sum_probs=332.9
Q ss_pred EEEEEE-----CCccccC--CCCCeEEeceeecCCCeEEEEEEEecchh---hHhhcCCCCCCCccHHHHHHHHHHHHHH
Q 001888 47 VGTLQY-----EGKQYPL--SPQQILLRDSKLKNTDYVYGVVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYLLF 116 (1000)
Q Consensus 47 ~G~~~~-----~~~~~~l--~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~T---ki~~n~~~~~~k~s~l~~~~n~~~~~~~ 116 (1000)
+|...+ +||+.|+ ..++.+++||.+.+ |++.+.|++||.+| |+.++...++.+++++++.+++++.+++
T Consensus 251 ~G~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~-g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~ 329 (723)
T 3j09_A 251 EGESYVDESMISGEPVPVLKSKGDEVFGATINNT-GVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 329 (723)
T ss_dssp ECCEEEECHHHHCCSSCEEECTTCEECTTCEECS-SCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHH
T ss_pred ECCeEEecccccCCCcceeecCCCeeccceEEec-CcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 455555 4888887 55799999999995 99999999999999 6677778888899999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHh
Q 001888 117 STLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQ 196 (1000)
Q Consensus 117 ~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~ 196 (1000)
+++++++++++++|.++.+. +|. ..+.+++.+++.+|||+|+++++++...+
T Consensus 330 ~~vl~~a~~~~~~~~~~~~~--------~~~--------------------~~~~~~i~vlvia~P~aL~la~p~a~~~~ 381 (723)
T 3j09_A 330 PTVLLVAISAFIYWYFIAHA--------PLL--------------------FAFTTLIAVLVVACPCAFGLATPTALTVG 381 (723)
T ss_dssp HHHHHHHHHHHTTSCSSTTC--------TTC--------------------CSHHHHHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCC--------cHH--------------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 99999888887665443211 121 14778899999999999999999999988
Q ss_pred HHHhhcccccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcc
Q 001888 197 SVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERT 276 (1000)
Q Consensus 197 ~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~ 276 (1000)
.. +| +++|+++|+++.+|+||++++||||||||||+|+|+|.++...+..
T Consensus 382 ~~------~~----a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~-------------------- 431 (723)
T 3j09_A 382 MG------KG----AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD-------------------- 431 (723)
T ss_dssp HH------HH----HTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC--------------------
T ss_pred HH------HH----HHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCCC--------------------
Confidence 87 45 7889999999999999999999999999999999999999765310
Q ss_pred cccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChh
Q 001888 277 FEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPD 356 (1000)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~ 356 (1000)
..+++...+.|.. .++||+
T Consensus 432 -----------------------------------------------~~~~l~~aa~~e~--------------~s~hP~ 450 (723)
T 3j09_A 432 -----------------------------------------------ERELLRLAAIAER--------------RSEHPI 450 (723)
T ss_dssp -----------------------------------------------HHHHHHHHHHHHT--------------TCCSHH
T ss_pred -----------------------------------------------HHHHHHHHHHHhc--------------cCCCch
Confidence 0123344444421 257999
Q ss_pred HHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHH
Q 001888 357 EAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFER 436 (1000)
Q Consensus 357 e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~ 436 (1000)
+.|+++++++.|+.+... ..++. .+ .+... . . .+.+|+++.+.+.
T Consensus 451 ~~Ai~~~a~~~~~~~~~~-------------------~~~~~---~~----g~g~~--~----~---~~~~g~~~~~~~~ 495 (723)
T 3j09_A 451 AEAIVKKALEHGIELGEP-------------------EKVEV---IA----GEGVV--A----D---GILVGNKRLMEDF 495 (723)
T ss_dssp HHHHHHHHHHTTCCCCSC-------------------CCCEE---ET----TTEEE--E----T---TEEEECHHHHHHT
T ss_pred hHHHHHHHHhcCCCcCCc-------------------cceEE---ec----CCceE--E----E---EEEECCHHHHHhc
Confidence 999999999988754221 11110 00 01110 0 1 2445887766442
Q ss_pred HhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeee
Q 001888 437 LSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAV 516 (1000)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i 516 (1000)
.. ...+++.+.+++++.+|+|++++|+ |++++|++++
T Consensus 496 ~~----~~~~~~~~~~~~~~~~g~~~~~va~---------------------------------------~~~~~G~i~i 532 (723)
T 3j09_A 496 GV----AVSNEVELALEKLEREAKTAVIVAR---------------------------------------NGRVEGIIAV 532 (723)
T ss_dssp TC----CCCHHHHHHHHHHHTTTCEEEEEEE---------------------------------------TTEEEEEEEE
T ss_pred CC----CccHHHHHHHHHHHhcCCeEEEEEE---------------------------------------CCEEEEEEee
Confidence 21 2235677788899999999999993 7899999999
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHH
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 596 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1000)
+|++|++++++|+.|+++||+++|+|||+..+|..+|+++|+.
T Consensus 533 ~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------------- 575 (723)
T 3j09_A 533 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------------- 575 (723)
T ss_dssp ECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-------------------------------------
T ss_pred cCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc-------------------------------------
Confidence 9999999999999999999999999999999999999999982
Q ss_pred HHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcC
Q 001888 597 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGD 676 (1000)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGD 676 (1000)
.++++++|++|..+++.++.. +.|+|+||
T Consensus 576 --------------------------------------------------~~~~~~~P~~K~~~v~~l~~~-~~v~~vGD 604 (723)
T 3j09_A 576 --------------------------------------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGD 604 (723)
T ss_dssp --------------------------------------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEEC
T ss_pred --------------------------------------------------EEEccCCHHHHHHHHHHHhcC-CeEEEEEC
Confidence 288999999999999999666 88999999
Q ss_pred CccChHHhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHH
Q 001888 677 GANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFT 747 (1000)
Q Consensus 677 G~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~ 747 (1000)
|.||++||+.||+||+|++. ...++++||+++.+ ++.+.++ +.+||+.++++++++.|.+.+|++.+.+
T Consensus 605 g~ND~~al~~A~vgiamg~g-~~~a~~~AD~vl~~~~~~~i~~~-i~~~r~~~~~i~~nl~~a~~~n~~~i~~ 675 (723)
T 3j09_A 605 GINDAPALAQADLGIAVGSG-SDVAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIKQNIFWALIYNVILIPA 675 (723)
T ss_dssp SSTTHHHHHHSSEEEECCCC-SCCSSCCSSEECSSCCTTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhHHHHhhCCEEEEeCCC-cHHHHHhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999643 33389999999964 7778888 8899999999999999999999985443
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-51 Score=495.94 Aligned_cols=413 Identities=19% Similarity=0.235 Sum_probs=332.0
Q ss_pred EEEEEE-----CCccccC--CCCCeEEeceeecCCCeEEEEEEEecchh---hHhhcCCCCCCCccHHHHHHHHHHHHHH
Q 001888 47 VGTLQY-----EGKQYPL--SPQQILLRDSKLKNTDYVYGVVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYLLF 116 (1000)
Q Consensus 47 ~G~~~~-----~~~~~~l--~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~T---ki~~n~~~~~~k~s~l~~~~n~~~~~~~ 116 (1000)
+|...+ +||+.|+ ..++.+++||.+.+ |++.+.|++||.+| |+.+....++.+++++++.+++++.+++
T Consensus 173 ~G~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~-g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~ 251 (645)
T 3j08_A 173 EGESYVDESMISGEPVPVLKSKGDEVFGATINNT-GVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 251 (645)
T ss_dssp ECCEEEECHHHHCCSSCEEECTTCEECTTCEECS-SCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHH
T ss_pred ECcEEEEcccccCCCCceecCCCCEeeccEEEec-CcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 455555 4888887 55799999999995 99999999999999 6677778888899999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHh
Q 001888 117 STLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQ 196 (1000)
Q Consensus 117 ~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~ 196 (1000)
+++++++++++++|.++.+. +|.. .+.+++.+++.+|||+|+++++++...+
T Consensus 252 ~~vl~~a~~~~~~~~~~~~~--------~~~~--------------------~~~~~i~vlvia~P~aL~la~p~a~~~~ 303 (645)
T 3j08_A 252 PTVLLVAISAFIYWYFIAHA--------PLLF--------------------AFTTLIAVLVVACPCAFGLATPTALTVG 303 (645)
T ss_dssp HHHHHHHHHHHHCSSCCCSC--------SCCC--------------------TTTTTHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCC--------cHHH--------------------HHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 99999888887765443221 1211 3556788999999999999999999988
Q ss_pred HHHhhcccccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcc
Q 001888 197 SVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERT 276 (1000)
Q Consensus 197 ~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~ 276 (1000)
.. +| +++|+++|+++.+|+||++++||||||||||+|+|+|.++...+..
T Consensus 304 ~~------~~----a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~-------------------- 353 (645)
T 3j08_A 304 MG------KG----AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD-------------------- 353 (645)
T ss_dssp HH------HH----HTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSC--------------------
T ss_pred HH------HH----HHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCCC--------------------
Confidence 87 45 7889999999999999999999999999999999999999765311
Q ss_pred cccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChh
Q 001888 277 FEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPD 356 (1000)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~ 356 (1000)
..+++...+.|.. .++||+
T Consensus 354 -----------------------------------------------~~~~l~~aa~~e~--------------~s~hPl 372 (645)
T 3j08_A 354 -----------------------------------------------ERELLRLAAIAER--------------RSEHPI 372 (645)
T ss_dssp -----------------------------------------------HHHHHHHHHHHHT--------------TCCSHH
T ss_pred -----------------------------------------------HHHHHHHHHHHhh--------------cCCChh
Confidence 0123444444422 257999
Q ss_pred HHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHH
Q 001888 357 EAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFER 436 (1000)
Q Consensus 357 e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~ 436 (1000)
+.|+++++++.|+.+... ..++. .+ .+.... . .+.+|+++.+.+.
T Consensus 373 a~Aiv~~a~~~g~~~~~~-------------------~~~~~---~~----g~g~~~------~---~v~~g~~~~~~~~ 417 (645)
T 3j08_A 373 AEAIVKKALEHGIELGEP-------------------EKVEV---IA----GEGVVA------D---GILVGNKRLMEDF 417 (645)
T ss_dssp HHHHHHHHHHTTCCCCSC-------------------CCCEE---ET----TTEEEE------T---TEEEECHHHHHHT
T ss_pred HHHHHHHHHhcCCCcCCc-------------------cceEE---ec----CCceEE------E---EEEECCHHHHHhc
Confidence 999999999988754221 11110 00 011100 1 2445887766442
Q ss_pred HhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeee
Q 001888 437 LSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAV 516 (1000)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i 516 (1000)
.. ...+.+.+.+++++.+|+|++++|+ |++++|++++
T Consensus 418 ~~----~~~~~~~~~~~~~~~~g~~~l~va~---------------------------------------~~~~~G~i~~ 454 (645)
T 3j08_A 418 GV----AVSNEVELALEKLEREAKTAVIVAR---------------------------------------NGRVEGIIAV 454 (645)
T ss_dssp TC----CCCHHHHHHHHHHHTTTCCCEEEEE---------------------------------------TTEEEEEEEE
T ss_pred CC----CccHHHHHHHHHHHhcCCeEEEEEE---------------------------------------CCEEEEEEEe
Confidence 21 2345677788899999999999994 7899999999
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHH
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 596 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1000)
+|++|++++++|+.|+++||+++|+|||+..+|..+|+++|+.
T Consensus 455 ~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------------- 497 (645)
T 3j08_A 455 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------------- 497 (645)
T ss_dssp ECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-------------------------------------
T ss_pred cCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC-------------------------------------
Confidence 9999999999999999999999999999999999999999982
Q ss_pred HHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcC
Q 001888 597 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGD 676 (1000)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGD 676 (1000)
.++++++|++|..+++.++.. +.|+|+||
T Consensus 498 --------------------------------------------------~~~~~~~P~~K~~~v~~l~~~-~~v~~vGD 526 (645)
T 3j08_A 498 --------------------------------------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGD 526 (645)
T ss_dssp --------------------------------------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEEC
T ss_pred --------------------------------------------------EEEEeCCHHhHHHHHHHHhhC-CeEEEEeC
Confidence 288999999999999999666 89999999
Q ss_pred CccChHHhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHH
Q 001888 677 GANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFT 747 (1000)
Q Consensus 677 G~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~ 747 (1000)
|.||++|++.||+||+|++. ...++++||+++.+ ++.+.++ +.+||+.++++++++.|.+.+|++.+.+
T Consensus 527 g~ND~~al~~A~vgiamg~g-~~~a~~~AD~vl~~~~~~~i~~~-i~~~r~~~~~i~~nl~~a~~~N~~~i~l 597 (645)
T 3j08_A 527 GINDAPALAQADLGIAVGSG-SDVAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIKQNIFWALIYNVILIPA 597 (645)
T ss_dssp SSSCHHHHHHSSEEEEECCC-SCCSSCCSSSEESSCCTTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHhHHHHHHhCCEEEEeCCC-cHHHHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999643 33489999999964 7778888 8899999999999999999999885433
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-25 Score=242.51 Aligned_cols=137 Identities=21% Similarity=0.305 Sum_probs=116.5
Q ss_pred cceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHH
Q 001888 507 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 586 (1000)
Q Consensus 507 ~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 586 (1000)
+-.+.|.+.+.|+++|++.++|+.|++.|++++|+|||+..++..+++.+|+..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 177 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-------------------------- 177 (263)
Confidence 456789999999999999999999999999999999999999999999888721
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhc
Q 001888 587 ITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG 666 (1000)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~ 666 (1000)
+|..+.|+.|..+++.++.
T Consensus 178 -------------------------------------------------------------~f~~~~p~~k~~~~~~l~~ 196 (263)
T 2yj3_A 178 -------------------------------------------------------------YYSNLSPEDKVRIIEKLKQ 196 (263)
Confidence 2333448899999998876
Q ss_pred CCCEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEe--cchhhhHHHHHHhhhhhhhhhhh
Q 001888 667 TGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAI--AQFRFLERLLLVHGHWCYRRISM 732 (1000)
Q Consensus 667 ~~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl--~~f~~l~~lll~~gR~~~~~i~~ 732 (1000)
.+..|+|||||.||++|++.||+||++.+. ...+...||+++ .++..+..+ +..+|..+++++.
T Consensus 197 ~~~~~~~VGD~~~D~~aa~~Agv~va~g~~-~~~~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~~ 262 (263)
T 2yj3_A 197 NGNKVLMIGDGVNDAAALALADVSVAMGNG-VDISKNVADIILVSNDIGTLLGL-IKNRKRLSNAIPS 262 (263)
Confidence 677899999999999999999999988543 233677899999 678888887 8899999888764
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-21 Score=212.97 Aligned_cols=272 Identities=21% Similarity=0.255 Sum_probs=193.9
Q ss_pred CCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCCC
Q 001888 211 TDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLN 290 (1000)
Q Consensus 211 ~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1000)
+++|+++|+++++|+|++++.|+||||||||.+.+.+.++...+. ..
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----~~----------------------------- 60 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----DE----------------------------- 60 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS----CH-----------------------------
T ss_pred HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC----CH-----------------------------
Confidence 889999999999999999999999999999999999988765431 00
Q ss_pred CccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHcCcE
Q 001888 291 GNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQ 370 (1000)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~ 370 (1000)
.+++ .+|.++ + ..+.||.+.|+.+++++.|+.
T Consensus 61 ----------------------------------~~~l---~~~~~~--e---------~~s~hp~~~a~~~~~~~~g~~ 92 (287)
T 3a1c_A 61 ----------------------------------RELL---RLAAIA--E---------RRSEHPIAEAIVKKALEHGIE 92 (287)
T ss_dssp ----------------------------------HHHH---HHHHHH--T---------TTCCSHHHHHHHHHHHHTTCC
T ss_pred ----------------------------------HHHH---HHHHHH--h---------hcCCCHHHHHHHHHHHhcCCC
Confidence 0112 222222 1 125799999999999998865
Q ss_pred EEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhccChhhHHHHHH
Q 001888 371 FFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRR 450 (1000)
Q Consensus 371 ~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~ 450 (1000)
... ...+..+ + .+.+.. . .+.+|.++.+.+... ..++.+..
T Consensus 93 ~~~-------------------~~~~~~~---~----G~~~~~------~---~~~~g~~~~~~~~~~----~~~~~~~~ 133 (287)
T 3a1c_A 93 LGE-------------------PEKVEVI---A----GEGVVA------D---GILVGNKRLMEDFGV----AVSNEVEL 133 (287)
T ss_dssp CCC-------------------CSCEEEE---T----TTEEEE------T---TEEEECHHHHHHTTC----CCCHHHHH
T ss_pred ccc-------------------cccceee---c----CCCeEE------E---EEEECCHHHHHhcCC----CccHHHHH
Confidence 211 0111100 0 000000 1 123465543322111 11123455
Q ss_pred HHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCCcHHHHHH
Q 001888 451 HINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDK 530 (1000)
Q Consensus 451 ~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v~e~I~~ 530 (1000)
..+.+..+|.+++++++ +..++|.+..+++++|++.++++.
T Consensus 134 ~~~~~~~~g~~~i~~~~---------------------------------------d~~~~~~~~~~~~~~~g~~~~l~~ 174 (287)
T 3a1c_A 134 ALEKLEREAKTAVIVAR---------------------------------------NGRVEGIIAVSDTLKESAKPAVQE 174 (287)
T ss_dssp HHHHHHHTTCEEEEEEE---------------------------------------TTEEEEEEEEECCBCTTHHHHHHH
T ss_pred HHHHHHhCCCeEEEEEE---------------------------------------CCEEEEEEEeccccchhHHHHHHH
Confidence 66778889999999994 567899999999999999999999
Q ss_pred HHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhhcccc
Q 001888 531 LAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAK 610 (1000)
Q Consensus 531 l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (1000)
|+++|+++.++||+....+..+.+.+|+..
T Consensus 175 L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-------------------------------------------------- 204 (287)
T 3a1c_A 175 LKRMGIKVGMITGDNWRSAEAISRELNLDL-------------------------------------------------- 204 (287)
T ss_dssp HHHTTCEEEEECSSCHHHHHHHHHHHTCSE--------------------------------------------------
T ss_pred HHHCCCeEEEEeCCCHHHHHHHHHHhCCce--------------------------------------------------
Confidence 999999999999999999999998888721
Q ss_pred cCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChHHhhhcCcc
Q 001888 611 ESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIG 690 (1000)
Q Consensus 611 ~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~mlk~AdvG 690 (1000)
.|..+.|..|...++.+... ..|++|||+.||++|.+.||+|
T Consensus 205 -------------------------------------~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~ 246 (287)
T 3a1c_A 205 -------------------------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLG 246 (287)
T ss_dssp -------------------------------------EECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEE
T ss_pred -------------------------------------eeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCee
Confidence 33444588899999988545 8899999999999999999999
Q ss_pred ccccCccccchhccCcEEe--cchhhhHHHHHHhhhhhhhhhh
Q 001888 691 VGISGVEGMQAVMSSDYAI--AQFRFLERLLLVHGHWCYRRIS 731 (1000)
Q Consensus 691 Ia~~g~e~~~ak~~aD~vl--~~f~~l~~lll~~gR~~~~~i~ 731 (1000)
|++.+.. ...+..||+++ .++..+..+ +..+|.++++++
T Consensus 247 v~~~~~~-~~~~~~ad~v~~~~~~~~l~~~-l~~~~~~~~~i~ 287 (287)
T 3a1c_A 247 IAVGSGS-DVAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIK 287 (287)
T ss_dssp EEECCCS-CCSSCCSSEEESSSCTHHHHHH-HHTTC-------
T ss_pred EEeCCCC-HHHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHhhC
Confidence 9885432 22567899999 778888887 789999888764
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.3e-19 Score=195.28 Aligned_cols=274 Identities=22% Similarity=0.251 Sum_probs=186.1
Q ss_pred eccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCCCCccccC
Q 001888 217 ARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVES 296 (1000)
Q Consensus 217 v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1000)
+|+++++|.|++++.|+||++||||.|+|++.++...+. .
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~----~------------------------------------ 40 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH----S------------------------------------ 40 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS----C------------------------------------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC----C------------------------------------
Confidence 478899999999999999999999999999998865432 0
Q ss_pred CCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHcCcEEEeecC
Q 001888 297 GKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQ 376 (1000)
Q Consensus 297 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~ 376 (1000)
..+++..++.+.. .+.+|...++.++++..|+....
T Consensus 41 ---------------------------~~~~~~~~~~~~~--------------~s~~~~~~a~~~~~~~~g~~~~~--- 76 (280)
T 3skx_A 41 ---------------------------EDELLQIAASLEA--------------RSEHPIAAAIVEEAEKRGFGLTE--- 76 (280)
T ss_dssp ---------------------------HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCC---
T ss_pred ---------------------------HHHHHHHHHHhhc--------------cCCCHHHHHHHHHHHhcCCCCCC---
Confidence 0122233222211 14688999999999998865321
Q ss_pred CeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhccChhhHHHHHHHHHHHH
Q 001888 377 TSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYA 456 (1000)
Q Consensus 377 ~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~ 456 (1000)
...+. .++ .+.+...+ ++.. +..|.++.+........ .....+.
T Consensus 77 ----------------~~~~~---~~~----g~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~--------~~~~~~~ 120 (280)
T 3skx_A 77 ----------------VEEFR---AIP----GKGVEGIV---NGRR--YMVVSPGYIRELGIKTD--------ESVEKLK 120 (280)
T ss_dssp ----------------CEEEE---EET----TTEEEEEE---TTEE--EEEECHHHHHHTTCCCC--------TTHHHHH
T ss_pred ----------------cccee---ecC----CCEEEEEE---CCEE--EEEecHHHHHHcCCCch--------HHHHHHH
Confidence 11111 111 11122222 1221 22366655543322111 2334567
Q ss_pred HccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCCcHHHHHHHHHcCC
Q 001888 457 EAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGI 536 (1000)
Q Consensus 457 ~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v~e~I~~l~~aGI 536 (1000)
.++.+++.+++ +..++|.+.+.++++|++.++++.|++.|+
T Consensus 121 ~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~ 161 (280)
T 3skx_A 121 QQGKTVVFILK---------------------------------------NGEVSGVIALADRIRPESREAISKLKAIGI 161 (280)
T ss_dssp TTTCEEEEEEE---------------------------------------TTEEEEEEEEEEEECTTHHHHHHHHHHTTC
T ss_pred hCCCeEEEEEE---------------------------------------CCEEEEEEEecCCCCHhHHHHHHHHHHCCC
Confidence 78888888873 567899999999999999999999999999
Q ss_pred eEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhhcccccCccce
Q 001888 537 KVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTF 616 (1000)
Q Consensus 537 kv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (1000)
++.++||+....+..+.+.+|+..
T Consensus 162 ~~~i~T~~~~~~~~~~~~~~gl~~-------------------------------------------------------- 185 (280)
T 3skx_A 162 KCMMLTGDNRFVAKWVAEELGLDD-------------------------------------------------------- 185 (280)
T ss_dssp EEEEECSSCHHHHHHHHHHHTCSE--------------------------------------------------------
T ss_pred EEEEEeCCCHHHHHHHHHHcCChh--------------------------------------------------------
Confidence 999999999999999999888731
Q ss_pred EEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChHHhhhcCccccccCc
Q 001888 617 GLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGV 696 (1000)
Q Consensus 617 ~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~mlk~AdvGIa~~g~ 696 (1000)
.|..+.|.+|...++-+.... .++|||||.||++|++.||+||+|.+.
T Consensus 186 -------------------------------~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~ 233 (280)
T 3skx_A 186 -------------------------------YFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIGAG 233 (280)
T ss_dssp -------------------------------EECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECSCC
T ss_pred -------------------------------HhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEecCC
Confidence 444556778888888874443 579999999999999999999999654
Q ss_pred cccchhccCcEEe--cchhhhHHHHHHhhhhhhhhhhhHHHHHHH
Q 001888 697 EGMQAVMSSDYAI--AQFRFLERLLLVHGHWCYRRISMMICYFFY 739 (1000)
Q Consensus 697 e~~~ak~~aD~vl--~~f~~l~~lll~~gR~~~~~i~~~i~~~~~ 739 (1000)
.. .++..||+++ .++..+..+ +..+|..+++++..+.|.+.
T Consensus 234 ~~-~~~~~a~~~~~~~~~~~l~~~-l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 234 TD-VAVETADIVLVRNDPRDVAAI-VELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp SS-SCCCSSSEECSSCCTHHHHHH-HHHHHTCCC-----------
T ss_pred cH-HHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 33 3788899998 567778888 78899999888887777653
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.9e-19 Score=175.94 Aligned_cols=140 Identities=21% Similarity=0.259 Sum_probs=110.0
Q ss_pred HHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCC
Q 001888 326 KFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFT 405 (1000)
Q Consensus 326 ~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~ 405 (1000)
+++...+||+..... .++|.|.||++++...+.. .....|+++.++|||
T Consensus 17 ~vl~~a~L~s~~~~~-----------~~n~~d~Ail~~~~~~~~~--------------------~~~~~~~~~~eiPFd 65 (170)
T 3gwi_A 17 RVLHSAWLNSHYQTG-----------LKNLLDTAVLEGTDEESAR--------------------SLASRWQKIDEIPFD 65 (170)
T ss_dssp HHHHHHHHHHHHCCS-----------CCCHHHHHHHHTSCHHHHH--------------------HHHHHSEEEEEECCC
T ss_pred HHHHHHHHcCCCCCC-----------CCChHHHHHHHHHHhcChh--------------------hhhhcCeEEeeEecC
Confidence 567777888754221 3699999999987543211 014678999999999
Q ss_pred CCCceEEEEEEcCCCcEEEEEccchhHhHHHHhcc---------ChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHH
Q 001888 406 SSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYR 476 (1000)
Q Consensus 406 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~ 476 (1000)
|+||||||+++.+++++++|+|||||.|+++|+.. +++.++++.+.++.|+.+|+|||++|||.++.++..
T Consensus 66 s~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~ 145 (170)
T 3gwi_A 66 FERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD 145 (170)
T ss_dssp TTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC
T ss_pred cccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc
Confidence 99999999999877889999999999999999752 345678899999999999999999999998754210
Q ss_pred HHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeeccc
Q 001888 477 IWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDK 519 (1000)
Q Consensus 477 ~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~ 519 (1000)
.....|+||+|+|++|+-|.
T Consensus 146 -----------------------~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 146 -----------------------YQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp -----------------------CCGGGSCSEEEEEEEEEEC-
T ss_pred -----------------------cCccccCCcEEEehhccccc
Confidence 01235899999999999875
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.38 E-value=1.8e-13 Score=150.01 Aligned_cols=143 Identities=13% Similarity=0.114 Sum_probs=101.7
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHH
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 596 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1000)
.+++||+++++++.|+++|+++.|+|||...++.++++++|+..++..+........
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~----------------------- 195 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFD----------------------- 195 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEEC-----------------------
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEc-----------------------
Confidence 579999999999999999999999999999999999999998765533322110000
Q ss_pred HHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcC
Q 001888 597 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGD 676 (1000)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGD 676 (1000)
.......+.+... ..+++..|.+|...+..++..++.|+|+||
T Consensus 196 ----------------~~~~~~~~~~~~i---------------------~~~~k~~~~~k~~~~~~~~~~~~~v~~vGD 238 (297)
T 4fe3_A 196 ----------------ENGVLKGFKGELI---------------------HVFNKHDGALKNTDYFSQLKDNSNIILLGD 238 (297)
T ss_dssp ----------------TTSBEEEECSSCC---------------------CTTCHHHHHHTCHHHHHHTTTCCEEEEEES
T ss_pred ----------------ccceeEecccccc---------------------chhhcccHHHHHHHHHHhhccCCEEEEEeC
Confidence 0000011111111 134555678888888888888899999999
Q ss_pred CccChHHhh---hcCcccccc--Ccc----ccchhccCcEEecchhh--hHHHH
Q 001888 677 GANDVGMLQ---EADIGVGIS--GVE----GMQAVMSSDYAIAQFRF--LERLL 719 (1000)
Q Consensus 677 G~ND~~mlk---~AdvGIa~~--g~e----~~~ak~~aD~vl~~f~~--l~~ll 719 (1000)
|.||+||++ .||+||+|+ +.+ ...+++++|+||.++++ +++.+
T Consensus 239 GiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~i 292 (297)
T 4fe3_A 239 SQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSI 292 (297)
T ss_dssp SGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHH
T ss_pred cHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHH
Confidence 999999955 999999884 111 12268999999998554 55553
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.01 E-value=3.3e-10 Score=114.96 Aligned_cols=136 Identities=10% Similarity=0.081 Sum_probs=100.2
Q ss_pred eeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHH
Q 001888 509 ILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENIT 588 (1000)
Q Consensus 509 ~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 588 (1000)
..++...++|.+ +|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------- 87 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------- 87 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE----------------------------
T ss_pred cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH----------------------------
Confidence 345555555544 9999999999999999999999999999999832
Q ss_pred HHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcC
Q 001888 589 KVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGT 667 (1000)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~ 667 (1000)
++... ..|...++.+ +..
T Consensus 88 -----------------------------------------------------------~f~~~--~~K~~~~~~~~~~~ 106 (189)
T 3mn1_A 88 -----------------------------------------------------------LFQGR--EDKLVVLDKLLAEL 106 (189)
T ss_dssp -----------------------------------------------------------EECSC--SCHHHHHHHHHHHH
T ss_pred -----------------------------------------------------------HhcCc--CChHHHHHHHHHHc
Confidence 11111 3455555554 333
Q ss_pred ---CCEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc------hhhhHHHHHHhhhhhhhhhhhHHHHHH
Q 001888 668 ---GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLLLVHGHWCYRRISMMICYFF 738 (1000)
Q Consensus 668 ---~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~------f~~l~~lll~~gR~~~~~i~~~i~~~~ 738 (1000)
...+++|||+.||++|++.||+|+++.+... .++..||+++.+ ...+.++ +..+|..+.++.+.+.|.+
T Consensus 107 g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~G~~~~l~~~-l~~~~~~~~~~~~~~~~~~ 184 (189)
T 3mn1_A 107 QLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAAS-FVREHAHGITRAQGGEGAAREFCEL-ILSAQGNLEAAHSVYLEGH 184 (189)
T ss_dssp TCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHTSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHHTTSTTC
T ss_pred CCChhHEEEECCCHHHHHHHHHCCCeEEeCCccH-HHHHhCCEEecCCCCCcHHHHHHHH-HHHccCcHHHHHHHHhccc
Confidence 3679999999999999999999999865433 378899999987 4557676 5667888888888777765
Q ss_pred HHH
Q 001888 739 YKN 741 (1000)
Q Consensus 739 ~~n 741 (1000)
..|
T Consensus 185 ~~~ 187 (189)
T 3mn1_A 185 HHH 187 (189)
T ss_dssp ---
T ss_pred ccc
Confidence 544
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.93 E-value=2.5e-10 Score=123.62 Aligned_cols=69 Identities=32% Similarity=0.524 Sum_probs=50.4
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchhh------hHHHHHHhhhh
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF------LERLLLVHGHW 725 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~~------l~~lll~~gR~ 725 (1000)
.|...++.+ +..| ..|+||||+.||++|++.|++||+|+++... ++..||+++.+... +.+++..+|+.
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~A~~v~~~~~e~Gv~~~i~~~~~~~~~~ 275 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEP-VKKAADYITLTNDEDGVAEAIERIFNVEGHH 275 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHCSEECCCGGGTHHHHHHHHHC------
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHH-HHHhCCEEcCCCCCcHHHHHHHHHHhccccc
Confidence 688888888 5544 4699999999999999999999999765543 89999999976332 55555566653
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.88 E-value=9.2e-10 Score=119.16 Aligned_cols=68 Identities=19% Similarity=0.286 Sum_probs=43.0
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchh------hhHHHHHHhhh
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR------FLERLLLVHGH 724 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~------~l~~lll~~gR 724 (1000)
.|+..++.+ +..| ..|++|||+.||++|++.|++||+|+++... ++..||++..+.. .+.++++-+|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~A~~v~~~~~e~Gv~~~i~~~~~~~~~ 274 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDE-VKEAAQAVTLTNAENGVAAAIRKYALNEGH 274 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCH-HHHHCSCBC------CHHHHHC--------
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHH-HHHhcceeccCCCccHHHHHHHHHhcccCc
Confidence 499988888 6655 5699999999999999999999999765544 8999999987622 24444455554
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.84 E-value=1.2e-09 Score=119.00 Aligned_cols=74 Identities=18% Similarity=0.218 Sum_probs=54.6
Q ss_pred hhHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchhh------hHHHHHHhhh
Q 001888 655 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF------LERLLLVHGH 724 (1000)
Q Consensus 655 ~qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~~------l~~lll~~gR 724 (1000)
..|+..++.+ +..| ..|++|||+.||++|++.|++||+|+++... ++..||++..+... +.+++...++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~s~~edGv~~~i~~~~~~~~~ 279 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPE-IKRKADWVTRSNDEQGVAYMMKEYFRMQQR 279 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHSSEECCCTTTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHH-HHHhcCEECCCCCccHHHHHHHHHHHhcCc
Confidence 4699988888 6655 4699999999999999999999999766544 89999999876332 4555455555
Q ss_pred hhhhh
Q 001888 725 WCYRR 729 (1000)
Q Consensus 725 ~~~~~ 729 (1000)
+-|.+
T Consensus 280 ~~~~~ 284 (290)
T 3dnp_A 280 KGFLD 284 (290)
T ss_dssp C----
T ss_pred ccHHh
Confidence 54443
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.80 E-value=5.8e-09 Score=113.12 Aligned_cols=57 Identities=21% Similarity=0.279 Sum_probs=48.4
Q ss_pred hhHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecch
Q 001888 655 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 712 (1000)
Q Consensus 655 ~qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f 712 (1000)
..|+..++.+ +..| ..|+||||+.||++|++.|++||+|+++... ++..||++..+-
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~-~k~~A~~v~~s~ 270 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQE-VIAAAKHTCAPY 270 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHH-HHHHSSEEECCG
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHH-HHHhcCeECCCC
Confidence 3599998888 6665 5699999999999999999999999776544 899999998763
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.79 E-value=3.9e-09 Score=107.22 Aligned_cols=95 Identities=18% Similarity=0.179 Sum_probs=73.8
Q ss_pred HHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhh
Q 001888 527 CIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQV 606 (1000)
Q Consensus 527 ~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (1000)
+|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~---------------------------------------------- 93 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISL---------------------------------------------- 93 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE----------------------------------------------
Confidence 4999999999999999999999999999999832
Q ss_pred cccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hc---CCCEEEEEcCCccChH
Q 001888 607 NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KG---TGKTTLAIGDGANDVG 682 (1000)
Q Consensus 607 ~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~---~~~~vlaiGDG~ND~~ 682 (1000)
++... ..|...++.+ +. ....+++|||+.||++
T Consensus 94 -----------------------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~ 130 (195)
T 3n07_A 94 -----------------------------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWP 130 (195)
T ss_dssp -----------------------------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHH
T ss_pred -----------------------------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHH
Confidence 11111 2344444444 33 2356999999999999
Q ss_pred HhhhcCccccccCccccchhccCcEEecc
Q 001888 683 MLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 683 mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
|++.|++++++.+... .++..||+++.+
T Consensus 131 ~~~~ag~~va~~na~~-~~~~~ad~v~~~ 158 (195)
T 3n07_A 131 VMEKVALRVCVADGHP-LLAQRANYVTHI 158 (195)
T ss_dssp HHTTSSEEEECTTSCH-HHHHHCSEECSS
T ss_pred HHHHCCCEEEECChHH-HHHHhCCEEEcC
Confidence 9999999999965543 378899999976
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=1.1e-08 Score=102.73 Aligned_cols=128 Identities=14% Similarity=0.078 Sum_probs=91.6
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHH
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQI 599 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (1000)
+.+++.++|+.|+++|++++++||++...+..+++.+|+... +
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~------~------------------------------- 78 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLF------F------------------------------- 78 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEE------E-------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCcee------e-------------------------------
Confidence 445677999999999999999999999999999999987320 0
Q ss_pred HhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCC---CEEEEEc
Q 001888 600 REGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIG 675 (1000)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~---~~vlaiG 675 (1000)
++ ...|...++.+ +..+ ..|++||
T Consensus 79 ---------------------~~-------------------------------~k~k~~~~~~~~~~~~~~~~~~~~vG 106 (180)
T 1k1e_A 79 ---------------------LG-------------------------------KLEKETACFDLMKQAGVTAEQTAYIG 106 (180)
T ss_dssp ---------------------ES-------------------------------CSCHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ---------------------cC-------------------------------CCCcHHHHHHHHHHcCCCHHHEEEEC
Confidence 00 12344444443 3333 5799999
Q ss_pred CCccChHHhhhcCccccccCccccchhccCcEEecchh------hhHHHHHHhhhhhhhhhhhHHHHHH
Q 001888 676 DGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR------FLERLLLVHGHWCYRRISMMICYFF 738 (1000)
Q Consensus 676 DG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~------~l~~lll~~gR~~~~~i~~~i~~~~ 738 (1000)
|+.||++|++.|++++++.+... .++..||+++.+.. .+.+. +...|..+.++...+.|..
T Consensus 107 D~~~Di~~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~g~~~~~~~~-~l~~~~~~~~~~~~~~~~~ 173 (180)
T 1k1e_A 107 DDSVDLPAFAACGTSFAVADAPI-YVKNAVDHVLSTHGGKGAFREMSDM-ILQAQGKSSVFDTAQGFLK 173 (180)
T ss_dssp CSGGGHHHHHHSSEEEECTTSCH-HHHTTSSEECSSCTTTTHHHHHHHH-HHHHTTCTHHHHCHHHHHH
T ss_pred CCHHHHHHHHHcCCeEEeCCccH-HHHhhCCEEecCCCCCcHHHHHHHH-HHHhcCchhhhhhccchhh
Confidence 99999999999999999865433 36788999998742 23333 3445666777766666554
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.76 E-value=6.9e-09 Score=115.46 Aligned_cols=149 Identities=20% Similarity=0.168 Sum_probs=94.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.++++.|+++|+++.++||+....+..++..+|+..--...+.+...
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~--------------------------- 230 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSG--------------------------- 230 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCC---------------------------
Confidence 68999999999999999999999999999999999999984321111111100
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEE-cCChhhHHHHHHHH-hc---CCCEEEE
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICC-RSSPKQKALVTRLV-KG---TGKTTLA 673 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~-r~sp~qK~~iV~~l-~~---~~~~vla 673 (1000)
.++|. +.. -..+..|..+++.+ +. ....|++
T Consensus 231 --------------------~~tg~------------------------~~~~~~~~kpk~~~~~~~~~~lgi~~~~~v~ 266 (335)
T 3n28_A 231 --------------------KLTGQ------------------------VLGEVVSAQTKADILLTLAQQYDVEIHNTVA 266 (335)
T ss_dssp --------------------EEEEE------------------------EESCCCCHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------eeeee------------------------ecccccChhhhHHHHHHHHHHcCCChhhEEE
Confidence 00110 000 01133455544444 33 3367999
Q ss_pred EcCCccChHHhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHH
Q 001888 674 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKN 741 (1000)
Q Consensus 674 iGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n 741 (1000)
||||.||++|++.||+||+|.+.+. ++..||+++.. +..+..+ +......-.|++..+.+.+.+|
T Consensus 267 vGDs~nDi~~a~~aG~~va~~~~~~--~~~~a~~v~~~~~l~~v~~~-L~~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 267 VGDGANDLVMMAAAGLGVAYHAKPK--VEAKAQTAVRFAGLGGVVCI-LSAALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp EECSGGGHHHHHHSSEEEEESCCHH--HHTTSSEEESSSCTHHHHHH-HHHHHHHTTCCCCC--------
T ss_pred EeCCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEEecCCHHHHHHH-HHhHHHHhhhhccccccccccc
Confidence 9999999999999999999944443 78899999853 4445444 3333344456666666665443
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.76 E-value=1.1e-08 Score=100.89 Aligned_cols=106 Identities=17% Similarity=0.119 Sum_probs=79.9
Q ss_pred cceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHH--HcCccccCceEEEEecCCchhhHhhhhccH
Q 001888 507 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGY--ACSLLRQEMKQIVITLDSPDMEALEKQGDK 584 (1000)
Q Consensus 507 ~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~--~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~ 584 (1000)
+...++.+.++|.. +|+.|+++|+++.++||+ ..+..+++ .+|+. .
T Consensus 30 ~g~~~~~f~~~D~~------~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-----~------------------- 77 (168)
T 3ewi_A 30 DQKEIISYDVKDAI------GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-----T------------------- 77 (168)
T ss_dssp SCCCEEEEEHHHHH------HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-----E-------------------
T ss_pred CCCEEEEEecCcHH------HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-----E-------------------
Confidence 44567777777773 899999999999999999 67777887 44441 0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH
Q 001888 585 ENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV 664 (1000)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l 664 (1000)
+ ..+..|...++.+
T Consensus 78 ----------------------------------------------------------------~--~g~~~K~~~l~~~ 91 (168)
T 3ewi_A 78 ----------------------------------------------------------------E--VSVSDKLATVDEW 91 (168)
T ss_dssp ----------------------------------------------------------------E--CSCSCHHHHHHHH
T ss_pred ----------------------------------------------------------------E--ECCCChHHHHHHH
Confidence 0 0123466666555
Q ss_pred -hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 665 -KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 665 -~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
+..| ..+++|||+.||++|++.|+++++|.+... .++..||+++.+
T Consensus 92 ~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~-~~k~~Ad~v~~~ 141 (168)
T 3ewi_A 92 RKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACS-GAQKAVGYICKC 141 (168)
T ss_dssp HHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTCCH-HHHTTCSEECSS
T ss_pred HHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCChhH-HHHHhCCEEeCC
Confidence 4443 569999999999999999999999965543 389999999975
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.72 E-value=6e-09 Score=108.88 Aligned_cols=175 Identities=11% Similarity=0.056 Sum_probs=95.6
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccc----cCceEEEE-ecCCc-hhhHhhhhccHHHHHHH
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR----QEMKQIVI-TLDSP-DMEALEKQGDKENITKV 590 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~----~~~~~~~i-~~~~~-~~~~~~~~~~~~~~~~~ 590 (1000)
..++.+++.++|++|+++|++++++|||....+..+++.+|+.. .++..+.. +++.. ....+ +...
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l------~~~~-- 91 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNE------GTNK-- 91 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSH------HHHH--
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccH------HHHH--
Confidence 44678889999999999999999999999999999999988642 12222211 11100 00111 1111
Q ss_pred HHHHHHHHHHhhh-h--hhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCce---EEEcCCh--hhHHHHHH
Q 001888 591 SLESVTKQIREGI-S--QVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASV---ICCRSSP--KQKALVTR 662 (1000)
Q Consensus 591 ~~~~~~~~~~~~~-~--~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~v---i~~r~sp--~qK~~iV~ 662 (1000)
.+ ..+.... . .+.... ....... + .+ ....+..+.+.... ....+ -+..+.| ..|...++
T Consensus 92 ---~i-~~~~~~~~~~~~~~~~~-~~~~~~~-~---~~--~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~ 159 (227)
T 1l6r_A 92 ---FL-EEMSKRTSMRSILTNRW-REASTGF-D---ID--PEDVDYVRKEAESR-GFVIFYSGYSWHLMNRGEDKAFAVN 159 (227)
T ss_dssp ---HH-HHHTTTSSCBCCGGGGG-CSSSEEE-B---CC--GGGHHHHHHHHHTT-TEEEEEETTEEEEEETTCSHHHHHH
T ss_pred ---HH-HHHHHHhcCCccccccc-eecccce-E---Ee--cCCHHHHHHHHHhc-CEEEEecCcEEEEecCCCCHHHHHH
Confidence 11 1110000 0 000000 0000000 0 00 00111111111110 11100 0123335 57999888
Q ss_pred HH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecch
Q 001888 663 LV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 712 (1000)
Q Consensus 663 ~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f 712 (1000)
.+ +..| ..++++|||.||++|++.|++||+|++... .++..||+++.+.
T Consensus 160 ~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~~~-~~k~~a~~v~~~~ 212 (227)
T 1l6r_A 160 KLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATD-NIKAVSDFVSDYS 212 (227)
T ss_dssp HHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCH-HHHHHCSEECSCC
T ss_pred HHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEEecCchH-HHHHhCCEEecCC
Confidence 88 5544 569999999999999999999999965543 3788899998763
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.71 E-value=2.6e-08 Score=102.46 Aligned_cols=107 Identities=16% Similarity=0.166 Sum_probs=81.3
Q ss_pred eeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHH
Q 001888 510 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITK 589 (1000)
Q Consensus 510 ~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 589 (1000)
.+....+.|.+ +|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 34455555555 9999999999999999999999999999999832
Q ss_pred HHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hc--
Q 001888 590 VSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KG-- 666 (1000)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~-- 666 (1000)
++... ..|..+++.+ +.
T Consensus 118 ----------------------------------------------------------~f~~~--k~K~~~l~~~~~~lg 137 (211)
T 3ij5_A 118 ----------------------------------------------------------LYQGQ--SDKLVAYHELLATLQ 137 (211)
T ss_dssp ----------------------------------------------------------EECSC--SSHHHHHHHHHHHHT
T ss_pred ----------------------------------------------------------hhccc--CChHHHHHHHHHHcC
Confidence 11111 3455555554 33
Q ss_pred -CCCEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecch
Q 001888 667 -TGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 712 (1000)
Q Consensus 667 -~~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f 712 (1000)
....|++|||+.||++|++.|++++++.+... .++..||+++.+.
T Consensus 138 ~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~-~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 138 CQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHP-LLLPKAHYVTRIK 183 (211)
T ss_dssp CCGGGEEEEECSGGGHHHHTTSSEEEECTTSCT-TTGGGSSEECSSC
T ss_pred cCcceEEEEcCCHHHHHHHHHCCCEEEeCCccH-HHHhhCCEEEeCC
Confidence 24679999999999999999999999965443 3788999999763
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.71 E-value=2.7e-08 Score=99.45 Aligned_cols=114 Identities=14% Similarity=0.175 Sum_probs=83.8
Q ss_pred eeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHH
Q 001888 510 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITK 589 (1000)
Q Consensus 510 ~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 589 (1000)
.+....+.|.+ +|+.|+++|+++.++||+....+..+++.+|+. .+.
T Consensus 36 ~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-------~~~-------------------- 82 (176)
T 3mmz_A 36 EFVSVHRGDGL------GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-------VLH-------------------- 82 (176)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-------EEE--------------------
T ss_pred HhHhcccccHH------HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-------eEe--------------------
Confidence 34444555544 899999999999999999999999999999873 000
Q ss_pred HHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcC-
Q 001888 590 VSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGT- 667 (1000)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~- 667 (1000)
.. ..|...++.+ +..
T Consensus 83 -------------------------------------------------------------~~--~~k~~~l~~~~~~~~ 99 (176)
T 3mmz_A 83 -------------------------------------------------------------GI--DRKDLALKQWCEEQG 99 (176)
T ss_dssp -------------------------------------------------------------SC--SCHHHHHHHHHHHHT
T ss_pred -------------------------------------------------------------CC--CChHHHHHHHHHHcC
Confidence 00 2344444444 333
Q ss_pred --CCEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc------hhhhHHHHH
Q 001888 668 --GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLLL 720 (1000)
Q Consensus 668 --~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~------f~~l~~lll 720 (1000)
...++++||+.||++|++.|++|+++.+... .++..||+++.+ ...+.++|+
T Consensus 100 ~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~-~~~~~ad~v~~~~~~~g~~~~l~~~l~ 159 (176)
T 3mmz_A 100 IAPERVLYVGNDVNDLPCFALVGWPVAVASAHD-VVRGAARAVTTVPGGDGAIREIASWIL 159 (176)
T ss_dssp CCGGGEEEEECSGGGHHHHHHSSEEEECTTCCH-HHHHHSSEECSSCTTTTHHHHHHHHHH
T ss_pred CCHHHEEEEcCCHHHHHHHHHCCCeEECCChhH-HHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 3569999999999999999999999965433 378889999987 555666643
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.66 E-value=8.1e-08 Score=102.44 Aligned_cols=56 Identities=29% Similarity=0.427 Sum_probs=46.2
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecch
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 712 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f 712 (1000)
.|+..++.+ +..| ..|+|||||.||++|++.|++||+|+++. ..++..||++..+.
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~-~~~k~~A~~v~~~~ 242 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAH-EEVKRVADFVTKPV 242 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCC-HHHHHTCSEEECCG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCc-HHHHHhCCEEeCCC
Confidence 588888887 5544 56999999999999999999999996543 34889999998763
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.66 E-value=3.1e-09 Score=116.62 Aligned_cols=58 Identities=21% Similarity=0.292 Sum_probs=48.8
Q ss_pred hhHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchh
Q 001888 655 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 713 (1000)
Q Consensus 655 ~qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~ 713 (1000)
..|+..++.+ +..| ..|++|||+.||++|++.|++||+|+++... ++..||+++.+..
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~~~~ 288 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKN-VKAAANYQAKSND 288 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHH-HHHHCSEECCCGG
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHH-HHHhccEEcCCCC
Confidence 4699888888 6655 5699999999999999999999999766544 8999999987633
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.65 E-value=2.7e-08 Score=100.83 Aligned_cols=116 Identities=17% Similarity=0.178 Sum_probs=83.1
Q ss_pred HHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhhc
Q 001888 528 IDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVN 607 (1000)
Q Consensus 528 I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 607 (1000)
|+.|+++|+++.++||+....+..+++.+|+..- +
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~------~--------------------------------------- 89 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHY------Y--------------------------------------- 89 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEE------E---------------------------------------
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccc------e---------------------------------------
Confidence 9999999999999999999999999999988420 0
Q ss_pred ccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChHHhhhc
Q 001888 608 SAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEA 687 (1000)
Q Consensus 608 ~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~mlk~A 687 (1000)
++ ....|+-...+++.+.-....+++|||+.||++|++.|
T Consensus 90 -------------~~---------------------------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~a 129 (191)
T 3n1u_A 90 -------------KG---------------------------QVDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQV 129 (191)
T ss_dssp -------------CS---------------------------CSSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred -------------eC---------------------------CCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHC
Confidence 00 01123333344444433446799999999999999999
Q ss_pred CccccccCccccchhccCcEEecc------hhhhHHHHHHhhhhhhhhh
Q 001888 688 DIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLLLVHGHWCYRRI 730 (1000)
Q Consensus 688 dvGIa~~g~e~~~ak~~aD~vl~~------f~~l~~lll~~gR~~~~~i 730 (1000)
|+++++.+... .++..||+++.+ ...+.+. +...|..+.++
T Consensus 130 g~~~~~~~~~~-~~~~~ad~v~~~~~~~g~~~~l~~~-ll~~~~~~~~~ 176 (191)
T 3n1u_A 130 GLGVAVSNAVP-QVLEFADWRTERTGGRGAVRELCDL-ILNAQNKAELA 176 (191)
T ss_dssp SEEEECTTCCH-HHHHHSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHH
T ss_pred CCEEEeCCccH-HHHHhCCEEecCCCCCcHHHHHHHH-HHHhcCcHHHH
Confidence 99999865443 378899999987 3445555 44455555443
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.61 E-value=1.1e-08 Score=110.10 Aligned_cols=58 Identities=21% Similarity=0.299 Sum_probs=47.7
Q ss_pred hhHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchh
Q 001888 655 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 713 (1000)
Q Consensus 655 ~qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~ 713 (1000)
..|+..++.+ +..| ..+++|||+.||++|++.|++||+|+++... ++..||++..+..
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~A~~v~~~~~ 260 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQ-LKDIATSICEDIF 260 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHH-HHHHCSEEECCGG
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHH-HHHhhhheeCCCc
Confidence 3588888887 5544 5699999999999999999999999766544 8999999998643
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.61 E-value=8.4e-09 Score=111.95 Aligned_cols=52 Identities=27% Similarity=0.237 Sum_probs=44.3
Q ss_pred hhHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcE
Q 001888 655 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDY 707 (1000)
Q Consensus 655 ~qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~ 707 (1000)
..|+..++.+ +..| ..|+||||+.||++|++.|++||+|+++... +|+.||+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~-vk~~A~~ 263 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQR-LKDLHPE 263 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHCTT
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHH-HHHhCCC
Confidence 4599988888 6665 5699999999999999999999999776554 8999985
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.58 E-value=5.7e-08 Score=103.04 Aligned_cols=57 Identities=18% Similarity=0.151 Sum_probs=46.2
Q ss_pred hhHHHHHHHH-hc----CCCEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 655 KQKALVTRLV-KG----TGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 655 ~qK~~iV~~l-~~----~~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
..|+..++.+ +. ....|+|||||.||++|++.|++||+|++......+..||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 4599988888 44 336799999999999999999999999776533367788988765
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.57 E-value=1e-07 Score=100.39 Aligned_cols=54 Identities=15% Similarity=0.214 Sum_probs=45.8
Q ss_pred cCChh--hHHHHHHHH-hcCCCEEEEEcCCccChHHhhhc--CccccccCccccchhccCcEEecc
Q 001888 651 RSSPK--QKALVTRLV-KGTGKTTLAIGDGANDVGMLQEA--DIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 651 r~sp~--qK~~iV~~l-~~~~~~vlaiGDG~ND~~mlk~A--dvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
.+.|. .|+..++.+ +..| |+++|||.||++||+.| ++||+|+++ +..||+++.+
T Consensus 153 ei~~~~~~Kg~al~~l~~~~g--via~GD~~ND~~Ml~~a~~g~~vam~Na-----~~~A~~v~~~ 211 (239)
T 1u02_A 153 ELRVPGVNKGSAIRSVRGERP--AIIAGDDATDEAAFEANDDALTIKVGEG-----ETHAKFHVAD 211 (239)
T ss_dssp EEECTTCCHHHHHHHHHTTSC--EEEEESSHHHHHHHHTTTTSEEEEESSS-----CCCCSEEESS
T ss_pred EEEcCCCCHHHHHHHHHhhCC--eEEEeCCCccHHHHHHhhCCcEEEECCC-----CCcceEEeCC
Confidence 34444 699999999 7777 99999999999999999 999999764 5679998866
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.55 E-value=2.3e-08 Score=108.26 Aligned_cols=60 Identities=22% Similarity=0.341 Sum_probs=47.6
Q ss_pred cCChh--hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 651 RSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 651 r~sp~--qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
...|. .|...++.+ +..| ..++++||+.||++|++.|++||+|++... ..+..||+++.+
T Consensus 191 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~-~~~~~a~~v~~~ 256 (282)
T 1rkq_A 191 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIP-SVKEVANFVTKS 256 (282)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHCSEECCC
T ss_pred EecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcH-HHHhhCCEEecC
Confidence 34444 699888888 5443 469999999999999999999999966543 377789999876
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=1.2e-07 Score=93.49 Aligned_cols=108 Identities=19% Similarity=0.075 Sum_probs=79.2
Q ss_pred HHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhh
Q 001888 527 CIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQV 606 (1000)
Q Consensus 527 ~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (1000)
+++.|+++|+++.++||+....+..+++.+|+...
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~--------------------------------------------- 73 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYL--------------------------------------------- 73 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEE---------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEe---------------------------------------------
Confidence 89999999999999999999999999999988421
Q ss_pred cccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hc---CCCEEEEEcCCccChH
Q 001888 607 NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KG---TGKTTLAIGDGANDVG 682 (1000)
Q Consensus 607 ~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~---~~~~vlaiGDG~ND~~ 682 (1000)
+... ..|...++.+ +. ....+++|||+.||++
T Consensus 74 ------------------------------------------~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~ 109 (164)
T 3e8m_A 74 ------------------------------------------FQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAK 109 (164)
T ss_dssp ------------------------------------------ECSC--SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHH
T ss_pred ------------------------------------------eccc--CChHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 0001 1233333333 22 2357999999999999
Q ss_pred HhhhcCccccccCccccchhccCcEEecc------hhhhHHHHHHhhhh
Q 001888 683 MLQEADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLLLVHGHW 725 (1000)
Q Consensus 683 mlk~AdvGIa~~g~e~~~ak~~aD~vl~~------f~~l~~lll~~gR~ 725 (1000)
|.+.||+++++.+... .++..||+++.+ +..+.+.++ +|++
T Consensus 110 ~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~g~~~e~~~~ll-~~~~ 156 (164)
T 3e8m_A 110 LLKRVGIAGVPASAPF-YIRRLSTIFLEKRGGEGVFREFVEKVL-GINL 156 (164)
T ss_dssp HHTTSSEEECCTTSCH-HHHTTCSSCCCCCTTTTHHHHHHHHHT-TCCH
T ss_pred HHHHCCCeEEcCChHH-HHHHhCcEEeccCCCCcHHHHHHHHHH-ccCc
Confidence 9999999998854433 378899999987 445555545 5543
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.51 E-value=1.1e-07 Score=102.06 Aligned_cols=57 Identities=28% Similarity=0.376 Sum_probs=48.3
Q ss_pred hhHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecch
Q 001888 655 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 712 (1000)
Q Consensus 655 ~qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f 712 (1000)
..|+..++.+ +..| ..|+||||+.||++|++.|++||+|+++... ++..||++..+.
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~~~ 253 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEK-VQSVADFVTDTV 253 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHTCSEECCCT
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHH-HHHhcCEeeCCC
Confidence 4699888888 6655 4699999999999999999999999766544 899999998763
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.50 E-value=1.1e-07 Score=96.59 Aligned_cols=117 Identities=18% Similarity=0.221 Sum_probs=88.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.+.++.|++.|++++++||.....+..+ +.+|+..- ...+.....
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~~~--------------------------- 129 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFEDG--------------------------- 129 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEETT---------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEeeCC---------------------------
Confidence 7889999999999999999999999988887777 77776321 111110000
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
. .......|..|...++.+ ....+++|||+.
T Consensus 130 --------------------~---------------------------~~~~~~~~~~k~~~l~~l--~~~~~i~iGD~~ 160 (201)
T 4ap9_A 130 --------------------K---------------------------FQGIRLRFRDKGEFLKRF--RDGFILAMGDGY 160 (201)
T ss_dssp --------------------E---------------------------EEEEECCSSCHHHHHGGG--TTSCEEEEECTT
T ss_pred --------------------c---------------------------eECCcCCccCHHHHHHhc--CcCcEEEEeCCH
Confidence 0 011344567788888877 456799999999
Q ss_pred cChHHhhhcCccccccCccccchhccCcEEecchhhhHHH
Q 001888 679 NDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
||++|++.||+||+|.+... .||+++.++..+..+
T Consensus 161 ~Di~~~~~ag~~v~~~~~~~-----~ad~v~~~~~el~~~ 195 (201)
T 4ap9_A 161 ADAKMFERADMGIAVGREIP-----GADLLVKDLKELVDF 195 (201)
T ss_dssp CCHHHHHHCSEEEEESSCCT-----TCSEEESSHHHHHHH
T ss_pred HHHHHHHhCCceEEECCCCc-----cccEEEccHHHHHHH
Confidence 99999999999999965543 899999998887766
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=5.3e-07 Score=86.94 Aligned_cols=107 Identities=19% Similarity=0.350 Sum_probs=77.4
Q ss_pred eCChhHHHHHHHHHHc-CcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccch
Q 001888 352 AESPDEAAFVIAAREV-GFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGAD 430 (1000)
Q Consensus 352 ~~sp~e~al~~~a~~~-g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~ 430 (1000)
++||...|++++|++. |+.+.. ... ......+|++..++.+|.+ +| .-+.+|++
T Consensus 49 SeHPla~AIv~~A~~~~~l~~~~-------------------~~~-~~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn~ 103 (156)
T 1svj_A 49 DETPEGRSIVILAKQRFNLRERD-------------------VQS-LHATFVPFTAQSRMSGINI---DN--RMIRKGSV 103 (156)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCC-------------------HHH-HTCEEEEEETTTTEEEEEE---TT--EEEEEEEH
T ss_pred CCCHHHHHHHHHHHHhcCCCccc-------------------ccc-cccceeeccccCCCCeEEE---CC--EEEEEeCc
Confidence 5799999999999986 654211 000 0012357888888777754 44 35678999
Q ss_pred hHhHHHHhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhcccee
Q 001888 431 SVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLIL 510 (1000)
Q Consensus 431 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~ 510 (1000)
+.|..++...+-.....+.+.++.++.+|.+++++| .|..+
T Consensus 104 ~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA---------------------------------------~d~~l 144 (156)
T 1svj_A 104 DAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVV---------------------------------------EGSRV 144 (156)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEE---------------------------------------ETTEE
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEE---------------------------------------ECCEE
Confidence 888777654332333457778889999999999999 36789
Q ss_pred eEEeeecccccC
Q 001888 511 LGATAVEDKLQK 522 (1000)
Q Consensus 511 lG~i~i~D~lr~ 522 (1000)
+|++++.|++||
T Consensus 145 ~GvIalaD~iK~ 156 (156)
T 1svj_A 145 LGVIALKDIVKG 156 (156)
T ss_dssp EEEEEEEECCCC
T ss_pred EEEEEEecCCCC
Confidence 999999999996
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=3e-07 Score=94.10 Aligned_cols=125 Identities=22% Similarity=0.275 Sum_probs=84.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.++++.+++.|+++.++||+....+..+...+|+...-.........
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 128 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDG--------------------------- 128 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECC---------------------------
Confidence 56789999999999999999999999988888777777762110000000000
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEc-CChhhHHHHHHHH-hcCC---CEEEE
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCR-SSPKQKALVTRLV-KGTG---KTTLA 673 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r-~sp~qK~~iV~~l-~~~~---~~vla 673 (1000)
.++|. +... +.+..|...+..+ +..| ..+++
T Consensus 129 --------------------~~~~~------------------------~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~ 164 (211)
T 1l7m_A 129 --------------------KLTGD------------------------VEGEVLKENAKGEILEKIAKIEGINLEDTVA 164 (211)
T ss_dssp --------------------EEEEE------------------------EECSSCSTTHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------EEcCC------------------------cccCccCCccHHHHHHHHHHHcCCCHHHEEE
Confidence 00000 0001 1234666666555 5444 46999
Q ss_pred EcCCccChHHhhhcCccccccCccccchhccCcEEecc--hhhhH
Q 001888 674 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLE 716 (1000)
Q Consensus 674 iGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~ 716 (1000)
+||+.||++|++.||++++|.+.+. .+..||+++.+ +..+.
T Consensus 165 iGD~~~Di~~~~~ag~~~~~~~~~~--~~~~a~~v~~~~~~~~l~ 207 (211)
T 1l7m_A 165 VGDGANDISMFKKAGLKIAFCAKPI--LKEKADICIEKRDLREIL 207 (211)
T ss_dssp EECSGGGHHHHHHCSEEEEESCCHH--HHTTCSEEECSSCGGGGG
T ss_pred EecChhHHHHHHHCCCEEEECCCHH--HHhhcceeecchhHHHHH
Confidence 9999999999999999999864332 67789999977 66554
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.44 E-value=3.5e-08 Score=107.80 Aligned_cols=55 Identities=18% Similarity=0.287 Sum_probs=46.3
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEec-c
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIA-Q 711 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~-~ 711 (1000)
.|+..++.+ +..| ..|++|||+.||++|++.|++||+|++... .++..||+++. +
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~~k~~a~~v~~~~ 283 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATD-SAKSHAKCVLPVS 283 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCH-HHHHHSSEECSSC
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcH-HHHhhCCEEEccC
Confidence 699988888 5554 469999999999999999999999976543 37788999987 5
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.39 E-value=2.2e-07 Score=99.93 Aligned_cols=57 Identities=25% Similarity=0.249 Sum_probs=46.9
Q ss_pred hhHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecch
Q 001888 655 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 712 (1000)
Q Consensus 655 ~qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f 712 (1000)
..|...++.+ +..| ..++++||+.||++|++.|++||+|++... .++..||+++.+.
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~~k~~a~~v~~~~ 250 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAE-NIKQIARYATDDN 250 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCH-HHHHHCSEECCCG
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccH-HHHHhCCeeCcCC
Confidence 4798888888 5544 469999999999999999999999966543 3788999998763
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.36 E-value=7.9e-07 Score=91.34 Aligned_cols=130 Identities=17% Similarity=0.224 Sum_probs=87.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceE--EEEecCCchhhHhhhhccHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQ--IVITLDSPDMEALEKQGDKENITKVSLESVT 596 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1000)
.+.+++.+.++.|++.|+++.++||.....+..+.+.+|+....... +.......
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 138 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGS----------------------- 138 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSB-----------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCc-----------------------
Confidence 37899999999999999999999999999999999998884321100 00000000
Q ss_pred HHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCCCEEEEEc
Q 001888 597 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIG 675 (1000)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~~~vlaiG 675 (1000)
+ ..+.....+|..+...+... .-....+++||
T Consensus 139 ----------------------------~-------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vG 171 (219)
T 3kd3_A 139 ----------------------------F-------------------KELDNSNGACDSKLSAFDKAKGLIDGEVIAIG 171 (219)
T ss_dssp ----------------------------E-------------------EEEECTTSTTTCHHHHHHHHGGGCCSEEEEEE
T ss_pred ----------------------------e-------------------eccCCCCCCcccHHHHHHHHhCCCCCCEEEEE
Confidence 0 00111233455666555544 44567899999
Q ss_pred CCccChHHhhh----cCccccccCccccchhccCcEEecchhhhHHHH
Q 001888 676 DGANDVGMLQE----ADIGVGISGVEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 676 DG~ND~~mlk~----AdvGIa~~g~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
|+.||++|++. +.+|+++.+.. ...+..||+++.++..+..+|
T Consensus 172 D~~~Di~~~~~G~~~~~v~~~~~~~~-~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 172 DGYTDYQLYEKGYATKFIAYMEHIER-EKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp SSHHHHHHHHHTSCSEEEEECSSCCC-HHHHHHCSEEESSHHHHHHHH
T ss_pred CCHhHHHHHhCCCCcEEEeccCcccc-HHHHhhcceeeCCHHHHHHhh
Confidence 99999999965 34445554332 236778999999988887764
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=6.2e-07 Score=90.53 Aligned_cols=97 Identities=13% Similarity=0.135 Sum_probs=71.9
Q ss_pred HHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhh
Q 001888 526 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 605 (1000)
Q Consensus 526 e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (1000)
.+|+.|+++|++++++||+....+..+++.+|+...
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~-------------------------------------------- 95 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHL-------------------------------------------- 95 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEE--------------------------------------------
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCcee--------------------------------------------
Confidence 389999999999999999999999999998887320
Q ss_pred hcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCC---CEEEEEcCCccCh
Q 001888 606 VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDV 681 (1000)
Q Consensus 606 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~---~~vlaiGDG~ND~ 681 (1000)
+.. ...|...++.+ +..| ..+++|||+.||+
T Consensus 96 -------------------------------------------~~~--~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di 130 (188)
T 2r8e_A 96 -------------------------------------------YQG--QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDW 130 (188)
T ss_dssp -------------------------------------------ECS--CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGH
T ss_pred -------------------------------------------ecC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 000 11233333333 3323 5699999999999
Q ss_pred HHhhhcCccccccCccccchhccCcEEecch
Q 001888 682 GMLQEADIGVGISGVEGMQAVMSSDYAIAQF 712 (1000)
Q Consensus 682 ~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f 712 (1000)
+|.+.||+++++.+.. ..++..||+++.+.
T Consensus 131 ~~a~~ag~~~~~~~~~-~~~~~~ad~v~~~~ 160 (188)
T 2r8e_A 131 PVMEKVGLSVAVADAH-PLLIPRADYVTRIA 160 (188)
T ss_dssp HHHTTSSEEEECTTSC-TTTGGGSSEECSSC
T ss_pred HHHHHCCCEEEecCcC-HHHHhcCCEEEeCC
Confidence 9999999999885433 23677899999875
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.34 E-value=3.6e-07 Score=101.30 Aligned_cols=75 Identities=16% Similarity=0.240 Sum_probs=56.6
Q ss_pred hhhHHHHHHHHhcC--CCEEEEEcCCccChHHhhhc----CccccccCccccchhccCcEEecc--h----hhhHHHHHH
Q 001888 654 PKQKALVTRLVKGT--GKTTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDYAIAQ--F----RFLERLLLV 721 (1000)
Q Consensus 654 p~qK~~iV~~l~~~--~~~vlaiGDG~ND~~mlk~A----dvGIa~~g~e~~~ak~~aD~vl~~--f----~~l~~lll~ 721 (1000)
+.+|+..++.+... .+.|+++|||.||++|++.| |+||+| ++.. .++..||+++.+ . ..+.++ +.
T Consensus 205 g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~-~lk~~Ad~v~~~~~~dGV~~~l~~~-~~ 281 (332)
T 1y8a_A 205 AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNE-YALKHADVVIISPTAMSEAKVIELF-ME 281 (332)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCH-HHHTTCSEEEECSSTHHHHHHHHHH-HH
T ss_pred CCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCH-HHHhhCcEEecCCCCCHHHHHHHHH-HH
Confidence 56799888876322 25599999999999999999 999999 6543 388999999876 2 224444 77
Q ss_pred hhhhhhhhhhh
Q 001888 722 HGHWCYRRISM 732 (1000)
Q Consensus 722 ~gR~~~~~i~~ 732 (1000)
.||..+ ++-+
T Consensus 282 ~~~~~~-~~~~ 291 (332)
T 1y8a_A 282 RKERAF-EVLS 291 (332)
T ss_dssp HGGGGG-GGGG
T ss_pred cCCchh-HHHH
Confidence 888877 5444
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.32 E-value=5.1e-07 Score=93.03 Aligned_cols=128 Identities=20% Similarity=0.256 Sum_probs=87.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
-++.|++.++++.|++.|++++++|+.....+..+...+|+...-...+.....
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~-------------------------- 127 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEND-------------------------- 127 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT--------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCC--------------------------
Confidence 468899999999999999999999999999999999888874321111111100
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcC-ChhhHHHHHHHH-hcCC---CEEE
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRS-SPKQKALVTRLV-KGTG---KTTL 672 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~-sp~qK~~iV~~l-~~~~---~~vl 672 (1000)
.++| .+.... ....|..+++.+ +..| ..++
T Consensus 128 ---------------------~~~~------------------------~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i 162 (217)
T 3m1y_A 128 ---------------------ALNG------------------------LVTGHMMFSHSKGEMLLVLQRLLNISKTNTL 162 (217)
T ss_dssp ---------------------EEEE------------------------EEEESCCSTTHHHHHHHHHHHHHTCCSTTEE
T ss_pred ---------------------EEEe------------------------eeccCCCCCCChHHHHHHHHHHcCCCHhHEE
Confidence 0000 011111 133455555555 4333 5699
Q ss_pred EEcCCccChHHhhhcCccccccCccccchhccCcEEecc--hhhhHHH
Q 001888 673 AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERL 718 (1000)
Q Consensus 673 aiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~l 718 (1000)
+|||+.||++|.+.||+++++.+.+. .+..||+++.+ +..+..+
T Consensus 163 ~vGDs~~Di~~a~~aG~~~~~~~~~~--l~~~ad~v~~~~dl~~~~~~ 208 (217)
T 3m1y_A 163 VVGDGANDLSMFKHAHIKIAFNAKEV--LKQHATHCINEPDLALIKPL 208 (217)
T ss_dssp EEECSGGGHHHHTTCSEEEEESCCHH--HHTTCSEEECSSBGGGGTTC
T ss_pred EEeCCHHHHHHHHHCCCeEEECccHH--HHHhcceeecccCHHHHHHH
Confidence 99999999999999999999944333 78899999975 4445444
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.31 E-value=1e-07 Score=102.34 Aligned_cols=55 Identities=22% Similarity=0.323 Sum_probs=45.2
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
.|...++.+ +..| ..++++||+.||++|++.|++||+|++... ..+..||+++.+
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~-~~~~~a~~v~~~ 248 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIE-KVKEASDIVTLT 248 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCH-HHHHHCSEECCC
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCH-HHHhhCCEEEcc
Confidence 698888887 5443 569999999999999999999999975543 367789999876
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=1.3e-06 Score=89.18 Aligned_cols=129 Identities=19% Similarity=0.122 Sum_probs=88.1
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccC--ceEEEEecCCchhhHhhhhccHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQE--MKQIVITLDSPDMEALEKQGDKENITKVSLESV 595 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1000)
-++.+++.+.++.|++.|++++++|+.....+..+...+|+...- ..
T Consensus 69 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~------------------------------- 117 (205)
T 3m9l_A 69 SRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEAD------------------------------- 117 (205)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGG-------------------------------
T ss_pred CCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcce-------------------------------
Confidence 357899999999999999999999999998888888888874211 00
Q ss_pred HHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEc
Q 001888 596 TKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIG 675 (1000)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiG 675 (1000)
++++.. ......|+--..+.+.+.-....+++||
T Consensus 118 -----------------------i~~~~~-----------------------~~~kp~~~~~~~~~~~~g~~~~~~i~iG 151 (205)
T 3m9l_A 118 -----------------------VLGRDE-----------------------APPKPHPGGLLKLAEAWDVSPSRMVMVG 151 (205)
T ss_dssp -----------------------EECTTT-----------------------SCCTTSSHHHHHHHHHTTCCGGGEEEEE
T ss_pred -----------------------EEeCCC-----------------------CCCCCCHHHHHHHHHHcCCCHHHEEEEC
Confidence 000000 0000111112223333322235699999
Q ss_pred CCccChHHhhhcCc-cccccCccccchhccCcEEecchhhhHHHHHHhhh
Q 001888 676 DGANDVGMLQEADI-GVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGH 724 (1000)
Q Consensus 676 DG~ND~~mlk~Adv-GIa~~g~e~~~ak~~aD~vl~~f~~l~~lll~~gR 724 (1000)
|+.||+.|.+.||+ +|+|.+.... .+..||+++.++..+..++=.+++
T Consensus 152 D~~~Di~~a~~aG~~~i~v~~~~~~-~~~~ad~v~~~~~el~~~~~~~~~ 200 (205)
T 3m9l_A 152 DYRFDLDCGRAAGTRTVLVNLPDNP-WPELTDWHARDCAQLRDLLSAEGH 200 (205)
T ss_dssp SSHHHHHHHHHHTCEEEECSSSSCS-CGGGCSEECSSHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCEEEEEeCCCCc-ccccCCEEeCCHHHHHHHHHhccc
Confidence 99999999999999 8998654432 677899999999988887433333
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.28 E-value=8.9e-07 Score=92.55 Aligned_cols=129 Identities=22% Similarity=0.236 Sum_probs=87.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
.++.+++.+.++.|++.|++++++|+.....+..+...+|+...-..
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 149 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV--------------------------------- 149 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee---------------------------------
Confidence 35789999999999999999999999999888888888886432111
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCC
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 677 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG 677 (1000)
++.+... -.....|+--..+.+.+.-....|++|||+
T Consensus 150 ---------------------~~~~~~~----------------------~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~ 186 (237)
T 4ex6_A 150 ---------------------IAGDDSV----------------------ERGKPHPDMALHVARGLGIPPERCVVIGDG 186 (237)
T ss_dssp ---------------------EECTTTS----------------------SSCTTSSHHHHHHHHHHTCCGGGEEEEESS
T ss_pred ---------------------EEeCCCC----------------------CCCCCCHHHHHHHHHHcCCCHHHeEEEcCC
Confidence 1111000 000111222233344443334679999999
Q ss_pred ccChHHhhhcCc---cccccCccccchhc-cCcEEecchhhhHHHHHHhh
Q 001888 678 ANDVGMLQEADI---GVGISGVEGMQAVM-SSDYAIAQFRFLERLLLVHG 723 (1000)
Q Consensus 678 ~ND~~mlk~Adv---GIa~~g~e~~~ak~-~aD~vl~~f~~l~~lll~~g 723 (1000)
.||+.|.+.||+ +|++++......+. .||+++.++..+..+ +..|
T Consensus 187 ~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~-l~~~ 235 (237)
T 4ex6_A 187 VPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTA-VLDG 235 (237)
T ss_dssp HHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHH-HHHC
T ss_pred HHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHH-HHcc
Confidence 999999999999 88875443222343 799999999988877 4444
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=1.9e-06 Score=91.81 Aligned_cols=53 Identities=15% Similarity=0.194 Sum_probs=44.7
Q ss_pred hhHHHHHHHH-hcCC-----CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 655 KQKALVTRLV-KGTG-----KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 655 ~qK~~iV~~l-~~~~-----~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
..|...++.+ +..| ..++++||+.||++|++.|++||+|+++.. . .++++..+
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~--~--~~~~~~~~ 233 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP--P--EGVLATPA 233 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC--C--TTCEECSS
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh--c--CCcEEeCC
Confidence 5789988888 6655 679999999999999999999999977665 3 67888765
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.27 E-value=1.7e-06 Score=90.46 Aligned_cols=180 Identities=11% Similarity=0.164 Sum_probs=93.4
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccc----cCceEEEEecCCchhhHhhhhccHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR----QEMKQIVITLDSPDMEALEKQGDKENITKVSLE 593 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (1000)
..+.+.+.+++++++++|++++++||+....+..+...+|+.. .++..+..+++......+ ....+.++....+
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l--~~~~~i~~~~~~~ 96 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASM--DEEWILWNEIRKR 96 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCC--SHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccH--HHHHHHHHHHHHh
Confidence 3577888999999999999999999999999999998888632 111111111100000001 0011111111000
Q ss_pred HHHHHHHhhhhhhcccccCccceEEEEe-ccchHHHhhHHHHHHHHHHHhhcCceE----EEcCCh--hhHHHHHHHH-h
Q 001888 594 SVTKQIREGISQVNSAKESKVTFGLVID-GKSLDFALDKKLEKMFLDLAIDCASVI----CCRSSP--KQKALVTRLV-K 665 (1000)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~-g~~l~~~~~~~~~~~~~~~~~~~~~vi----~~r~sp--~qK~~iV~~l-~ 665 (1000)
............ ..... .+.+ +..-. .....+........ ++ +....| ..|...++.+ +
T Consensus 97 -----~~~~~~~~~~~~-~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~ei~~~~~~K~~~~~~~~~ 163 (231)
T 1wr8_A 97 -----FPNARTSYTMPD-RRAGL-VIMRETINVE-----TVREIINELNLNLV-AVDSGFAIHVKKPWINKGSGIEKASE 163 (231)
T ss_dssp -----CTTCCBCTTGGG-CSSCE-EECTTTSCHH-----HHHHHHHHTTCSCE-EEECSSCEEEECTTCCHHHHHHHHHH
T ss_pred -----CCCceEEecCCC-ceeeE-EEECCCCCHH-----HHHHHHHhcCCcEE-EEecCcEEEEecCCCChHHHHHHHHH
Confidence 000000000000 00011 1122 11111 11111111111111 11 112223 3688888877 5
Q ss_pred cCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchh
Q 001888 666 GTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 713 (1000)
Q Consensus 666 ~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~ 713 (1000)
..| ..++++||+.||++|++.|++||+|.+... ..+..||+++.+..
T Consensus 164 ~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~~~-~~~~~a~~v~~~~~ 213 (231)
T 1wr8_A 164 FLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPK-ILKENADYVTKKEY 213 (231)
T ss_dssp HHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHTTCSEECSSCH
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHcCCeEEecCCCH-HHHhhCCEEecCCC
Confidence 433 569999999999999999999999965543 36778999987643
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.24 E-value=1.9e-06 Score=98.69 Aligned_cols=135 Identities=21% Similarity=0.234 Sum_probs=92.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.|++.+.++.|++.|+++.++||.....+..+++.+|+-..-...+.+...
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg--------------------------- 308 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDG--------------------------- 308 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETT---------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCC---------------------------
Confidence 78999999999999999999999999999999999999984211111111000
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCC---CEEEEE
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 674 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~---~~vlai 674 (1000)
.++|.... .-..++-|..+++.+ +..| ..+++|
T Consensus 309 --------------------~~tg~~~~-----------------------~v~~~kpk~~~~~~~~~~~gi~~~~~i~v 345 (415)
T 3p96_A 309 --------------------TLTGRVVG-----------------------PIIDRAGKATALREFAQRAGVPMAQTVAV 345 (415)
T ss_dssp --------------------EEEEEECS-----------------------SCCCHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred --------------------EEEeeEcc-----------------------CCCCCcchHHHHHHHHHHcCcChhhEEEE
Confidence 11111000 011245566666665 4444 569999
Q ss_pred cCCccChHHhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhh
Q 001888 675 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWC 726 (1000)
Q Consensus 675 GDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~ 726 (1000)
|||.||++|++.||+|+++.+.+. .+..||+++.. +..+..+ +-.+|.-
T Consensus 346 GD~~~Di~~a~~aG~~va~~~~~~--~~~~ad~~i~~~~l~~ll~~-l~~~~~~ 396 (415)
T 3p96_A 346 GDGANDIDMLAAAGLGIAFNAKPA--LREVADASLSHPYLDTVLFL-LGVTRGE 396 (415)
T ss_dssp ECSGGGHHHHHHSSEEEEESCCHH--HHHHCSEEECSSCTTHHHHH-TTCCHHH
T ss_pred ECCHHHHHHHHHCCCeEEECCCHH--HHHhCCEEEccCCHHHHHHH-hCCCHHH
Confidence 999999999999999999954443 78889999874 4445555 3444433
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.22 E-value=7.9e-07 Score=94.90 Aligned_cols=62 Identities=27% Similarity=0.469 Sum_probs=49.5
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchhh--hHHH
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF--LERL 718 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~~--l~~l 718 (1000)
.|...++.+ +..| ..+++|||+.||++|++.|++||+|.+... ..+..||+++.+... +.++
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~-~~~~~a~~v~~~~~~dGv~~~ 254 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKE-DVKAAADYVTAPIDEDGISKA 254 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHSSEECCCGGGTHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccH-HHHhhCCEEeccCchhhHHHH
Confidence 688877777 5444 569999999999999999999999965543 367889999987665 6555
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.20 E-value=3.5e-06 Score=86.90 Aligned_cols=123 Identities=12% Similarity=0.077 Sum_probs=81.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.+.++.+++.|++++++|+.....+..+....|+...-..++
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~-------------------------------- 141 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALA-------------------------------- 141 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEE--------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEE--------------------------------
Confidence 457899999999999999999999998887777777777632111110
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
.+... -.....|.--..+.+.+.-....+++|||+.
T Consensus 142 ----------------------~~~~~----------------------~~~kp~~~~~~~~~~~~~i~~~~~i~iGD~~ 177 (226)
T 1te2_A 142 ----------------------SAEKL----------------------PYSKPHPQVYLDCAAKLGVDPLTCVALEDSV 177 (226)
T ss_dssp ----------------------ECTTS----------------------SCCTTSTHHHHHHHHHHTSCGGGEEEEESSH
T ss_pred ----------------------ecccc----------------------CCCCCChHHHHHHHHHcCCCHHHeEEEeCCH
Confidence 00000 0000112222233333333335699999999
Q ss_pred cChHHhhhcCccccc----cCccccchhccCcEEecchhhhHHH
Q 001888 679 NDVGMLQEADIGVGI----SGVEGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~----~g~e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
||++|++.||+++++ .+... ..+..||+++.++..+...
T Consensus 178 nDi~~a~~aG~~~~~~~~~~~~~~-~~~~~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 178 NGMIASKAARMRSIVVPAPEAQND-PRFVLANVKLSSLTELTAK 220 (226)
T ss_dssp HHHHHHHHTTCEEEECCCTTTTTC-GGGGGSSEECSCGGGCCHH
T ss_pred HHHHHHHHcCCEEEEEcCCCCccc-ccccccCeEECCHHHHhHH
Confidence 999999999999877 22221 2577899999998876655
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.19 E-value=1.8e-06 Score=94.70 Aligned_cols=127 Identities=20% Similarity=0.198 Sum_probs=85.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.|++.++++.|+++|+++.++||.....+..+.+.+|+..--...+.....
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg--------------------------- 231 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDN--------------------------- 231 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETT---------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCC---------------------------
Confidence 48999999999999999999999999999999999999984311111111110
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEc-CChhhHHHHHHHH-hcCC---CEEEE
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCR-SSPKQKALVTRLV-KGTG---KTTLA 673 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r-~sp~qK~~iV~~l-~~~~---~~vla 673 (1000)
.++|. +... ..++-|..+++.+ +..| ..+++
T Consensus 232 --------------------~~tg~------------------------i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~ 267 (317)
T 4eze_A 232 --------------------VLTDN------------------------ITLPIMNAANKKQTLVDLAARLNIATENIIA 267 (317)
T ss_dssp --------------------EEEEE------------------------ECSSCCCHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------eeeee------------------------EecccCCCCCCHHHHHHHHHHcCCCcceEEE
Confidence 00000 0000 1234455555544 3333 56999
Q ss_pred EcCCccChHHhhhcCccccccCccccchhccCcEEec--chhhhHHH
Q 001888 674 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIA--QFRFLERL 718 (1000)
Q Consensus 674 iGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~--~f~~l~~l 718 (1000)
|||+.||++|.+.||+|+++.+.+. .+..||.++. ++..+..+
T Consensus 268 VGDs~~Di~aa~~AG~~va~~~~~~--~~~~a~~~i~~~~L~~ll~~ 312 (317)
T 4eze_A 268 CGDGANDLPMLEHAGTGIAWKAKPV--VREKIHHQINYHGFELLLFL 312 (317)
T ss_dssp EECSGGGHHHHHHSSEEEEESCCHH--HHHHCCEEESSSCGGGGGGG
T ss_pred EeCCHHHHHHHHHCCCeEEeCCCHH--HHHhcCeeeCCCCHHHHHHH
Confidence 9999999999999999999954433 6778888875 34444433
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.19 E-value=2.3e-06 Score=92.67 Aligned_cols=57 Identities=25% Similarity=0.282 Sum_probs=46.4
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchh
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 713 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~ 713 (1000)
.|+..++.+ +..| ..++++||+.||++|++.|++||+|.+... ..+..||+++.+..
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~-~~~~~a~~v~~~~~ 276 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNARE-DIKSIADAVTLTND 276 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCH-HHHHHCSEECCCGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCH-HHHhhCceeecCCC
Confidence 688888887 5554 469999999999999999999999965543 37788999987633
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.18 E-value=4.1e-06 Score=86.62 Aligned_cols=120 Identities=17% Similarity=0.129 Sum_probs=85.1
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
-++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-..+
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 132 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAI-------------------------------- 132 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeee--------------------------------
Confidence 357899999999999999999999999988888888888874321111
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCC--hhhHHHHHHHH-hc---CCCEE
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSS--PKQKALVTRLV-KG---TGKTT 671 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~s--p~qK~~iV~~l-~~---~~~~v 671 (1000)
+.+... ..-|..+++.+ +. ....+
T Consensus 133 --------------------------------------------------~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 162 (226)
T 3mc1_A 133 --------------------------------------------------VGSSLDGKLSTKEDVIRYAMESLNIKSDDA 162 (226)
T ss_dssp --------------------------------------------------EEECTTSSSCSHHHHHHHHHHHHTCCGGGE
T ss_pred --------------------------------------------------eccCCCCCCCCCHHHHHHHHHHhCcCcccE
Confidence 111111 11233333333 33 23579
Q ss_pred EEEcCCccChHHhhhcCc---cccccCccccch-hccCcEEecchhhhHHHH
Q 001888 672 LAIGDGANDVGMLQEADI---GVGISGVEGMQA-VMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 672 laiGDG~ND~~mlk~Adv---GIa~~g~e~~~a-k~~aD~vl~~f~~l~~ll 719 (1000)
++|||+.||+.|.+.||+ +|++++...... +..||+++.++..+..++
T Consensus 163 i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 163 IMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp EEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred EEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 999999999999999999 666644332222 578999999999988874
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.10 E-value=8.1e-06 Score=87.70 Aligned_cols=49 Identities=14% Similarity=0.155 Sum_probs=40.4
Q ss_pred cceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 507 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 507 ~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
|.|++.- .+.+-+.+.++|++|+++|++++++|||....+..+...+++
T Consensus 17 DGTLl~~---~~~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 65 (275)
T 1xvi_A 17 DGTLLDS---HSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGL 65 (275)
T ss_dssp TTTTSCS---SCCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred CCCCCCC---CCcCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 4555531 234557799999999999999999999999999999999876
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=1.3e-06 Score=92.19 Aligned_cols=56 Identities=21% Similarity=0.346 Sum_probs=44.8
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhcc-------CcEEecch
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMS-------SDYAIAQF 712 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~-------aD~vl~~f 712 (1000)
.|...++.+ +..| ..++++||+.||++|++.|++||+|++... ..+.. ||++..+.
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~-~~k~~a~~~~~~a~~v~~~~ 228 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQP-ELLHWYDQWGDSRHYRAQSS 228 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCH-HHHHHHHHHCCTTEEECSSC
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcH-HHHHHHhcccccceeecCCc
Confidence 699888888 5554 469999999999999999999999965543 36664 88988753
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.06 E-value=1.5e-05 Score=81.30 Aligned_cols=126 Identities=20% Similarity=0.177 Sum_probs=88.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.++++.|++. ++++++|+.....+..+.+.+|+...-...+....+.
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 121 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 121 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS--------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCc--------------------------
Confidence 5789999999999999 9999999999999999999998743110001100000
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
.....-...|..|..+++.+......+++|||+.
T Consensus 122 ----------------------------------------------~~~~~~~p~p~~~~~~l~~l~~~~~~~~~iGD~~ 155 (206)
T 1rku_A 122 ----------------------------------------------RVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSY 155 (206)
T ss_dssp ----------------------------------------------CEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSS
T ss_pred ----------------------------------------------eEEeeecCCCchHHHHHHHHHhcCCEEEEEeCCh
Confidence 0000012457889888888855567899999999
Q ss_pred cChHHhhhcCccccccCccccchhc-cCcEE-ecchhhhHHHH
Q 001888 679 NDVGMLQEADIGVGISGVEGMQAVM-SSDYA-IAQFRFLERLL 719 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~~g~e~~~ak~-~aD~v-l~~f~~l~~ll 719 (1000)
||+.|.+.||+++.+.+.+. .+. +++++ +.++..+..+|
T Consensus 156 ~Di~~a~~aG~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l 196 (206)
T 1rku_A 156 NDTTMLSEAHAGILFHAPEN--VIREFPQFPAVHTYEDLKREF 196 (206)
T ss_dssp TTHHHHHHSSEEEEESCCHH--HHHHCTTSCEECSHHHHHHHH
T ss_pred hhHHHHHhcCccEEECCcHH--HHHHHhhhccccchHHHHHHH
Confidence 99999999999998744332 333 45554 66677666553
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.04 E-value=6.2e-06 Score=86.36 Aligned_cols=120 Identities=17% Similarity=0.104 Sum_probs=83.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
-++.+++.++++.|++.|++++++|+.....+..+...+|+...-..+
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 156 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYI-------------------------------- 156 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEE--------------------------------
Confidence 357899999999999999999999999988888888888874321111
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCC--hhhHHHHH----HHHhcC-CCE
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSS--PKQKALVT----RLVKGT-GKT 670 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~s--p~qK~~iV----~~l~~~-~~~ 670 (1000)
+.+... ..-|..++ +.+.-. ...
T Consensus 157 --------------------------------------------------~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~ 186 (240)
T 3sd7_A 157 --------------------------------------------------AGSNLDGTRVNKNEVIQYVLDLCNVKDKDK 186 (240)
T ss_dssp --------------------------------------------------EEECTTSCCCCHHHHHHHHHHHHTCCCGGG
T ss_pred --------------------------------------------------EeccccCCCCCCHHHHHHHHHHcCCCCCCc
Confidence 111111 11122333 333323 457
Q ss_pred EEEEcCCccChHHhhhcCc---cccccCccccc-hhccCcEEecchhhhHHHH
Q 001888 671 TLAIGDGANDVGMLQEADI---GVGISGVEGMQ-AVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 671 vlaiGDG~ND~~mlk~Adv---GIa~~g~e~~~-ak~~aD~vl~~f~~l~~ll 719 (1000)
+++|||+.||+.|.+.||+ +|+++...... .+..||+++.++..+..+|
T Consensus 187 ~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 187 VIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred EEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 9999999999999999999 55543322221 2478999999999888774
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.02 E-value=5.3e-06 Score=86.09 Aligned_cols=126 Identities=15% Similarity=0.084 Sum_probs=82.7
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
-++.+++.+.++.|++.|++++++|+.....+..+....|+...-..
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 136 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKIN--------------------------------- 136 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSC---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhhe---------------------------------
Confidence 35779999999999999999999999999888888888887432111
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCC
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 677 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG 677 (1000)
++.+... -.....|+--..+.+.+.-....+++|||+
T Consensus 137 ---------------------~~~~~~~----------------------~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~ 173 (233)
T 3s6j_A 137 ---------------------IVTRDDV----------------------SYGKPDPDLFLAAAKKIGAPIDECLVIGDA 173 (233)
T ss_dssp ---------------------EECGGGS----------------------SCCTTSTHHHHHHHHHTTCCGGGEEEEESS
T ss_pred ---------------------eeccccC----------------------CCCCCChHHHHHHHHHhCCCHHHEEEEeCC
Confidence 0110000 000011111122222222223569999999
Q ss_pred ccChHHhhhcCc---cccccCccccchhcc-CcEEecchhhhHHHH
Q 001888 678 ANDVGMLQEADI---GVGISGVEGMQAVMS-SDYAIAQFRFLERLL 719 (1000)
Q Consensus 678 ~ND~~mlk~Adv---GIa~~g~e~~~ak~~-aD~vl~~f~~l~~ll 719 (1000)
.||+.|.+.||+ +|+++.......+.. ||+++.++..+..+|
T Consensus 174 ~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l 219 (233)
T 3s6j_A 174 IWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHL 219 (233)
T ss_dssp HHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTG
T ss_pred HHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHH
Confidence 999999999999 555543333223443 999999999888874
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.01 E-value=7.7e-06 Score=84.75 Aligned_cols=126 Identities=19% Similarity=0.271 Sum_probs=85.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCce--EEEEecCCchhhHhhhhccHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMK--QIVITLDSPDMEALEKQGDKENITKVSLESVT 596 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1000)
++.|++.++++.|+++|++++++||.....+..+.+.+|+.....- .+.....
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~------------------------- 140 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFN------------------------- 140 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTT-------------------------
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCC-------------------------
Confidence 6889999999999999999999999999999999999998531100 0000000
Q ss_pred HHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEE-cC-----ChhhHHHHHHHH-hcCC-
Q 001888 597 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICC-RS-----SPKQKALVTRLV-KGTG- 668 (1000)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~-r~-----sp~qK~~iV~~l-~~~~- 668 (1000)
..+.+ .. .+..|..+++.+ +..|
T Consensus 141 -------------------------------------------------~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~ 171 (225)
T 1nnl_A 141 -------------------------------------------------GEYAGFDETQPTAESGGKGKVIKLLKEKFHF 171 (225)
T ss_dssp -------------------------------------------------SCEEEECTTSGGGSTTHHHHHHHHHHHHHCC
T ss_pred -------------------------------------------------CcEecCCCCCcccCCCchHHHHHHHHHHcCC
Confidence 00111 11 122455555554 4333
Q ss_pred CEEEEEcCCccChHHhhhcCccccccCccc-cchhccCcEEecchhhhHHH
Q 001888 669 KTTLAIGDGANDVGMLQEADIGVGISGVEG-MQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 669 ~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~-~~ak~~aD~vl~~f~~l~~l 718 (1000)
..+++|||+.||+.|.+.||++|++..... ......+|+++.++..+..+
T Consensus 172 ~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (225)
T 1nnl_A 172 KKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGE 222 (225)
T ss_dssp SCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGCC-
T ss_pred CcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHHHH
Confidence 679999999999999999999887743221 12345689999988876554
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.01 E-value=1.1e-05 Score=83.84 Aligned_cols=41 Identities=15% Similarity=0.053 Sum_probs=38.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
.+.+++.+.++.|++.|+++.++||.....+..+++.+|+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999999999999984
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.00 E-value=7e-06 Score=80.40 Aligned_cols=109 Identities=13% Similarity=0.055 Sum_probs=76.5
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHH
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQI 599 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (1000)
+.+++.++|+.|+++|++++++||+....+..+.+.+|+.. .+++.
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~------~~~~~---------------------------- 82 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE------IYTGS---------------------------- 82 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE------EEECC----------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh------hccCC----------------------------
Confidence 45667899999999999999999999999999999988731 00000
Q ss_pred HhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCcc
Q 001888 600 REGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGAN 679 (1000)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~N 679 (1000)
...|+--..+++.+.-....+++|||+.|
T Consensus 83 ---------------------------------------------------kp~~~~~~~~~~~~~~~~~~~~~vGD~~~ 111 (162)
T 2p9j_A 83 ---------------------------------------------------YKKLEIYEKIKEKYSLKDEEIGFIGDDVV 111 (162)
T ss_dssp -----------------------------------------------------CHHHHHHHHHHTTCCGGGEEEEECSGG
T ss_pred ---------------------------------------------------CCCHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence 00111111222222223356999999999
Q ss_pred ChHHhhhcCccccccCccccchhccCcEEecchhh
Q 001888 680 DVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF 714 (1000)
Q Consensus 680 D~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~~ 714 (1000)
|+.|.+.||+++++.+... ..+..||+++.+...
T Consensus 112 Di~~a~~ag~~~~~~~~~~-~~~~~a~~v~~~~~~ 145 (162)
T 2p9j_A 112 DIEVMKKVGFPVAVRNAVE-EVRKVAVYITQRNGG 145 (162)
T ss_dssp GHHHHHHSSEEEECTTSCH-HHHHHCSEECSSCSS
T ss_pred HHHHHHHCCCeEEecCccH-HHHhhCCEEecCCCC
Confidence 9999999999988754322 266789999987543
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.99 E-value=7e-06 Score=83.11 Aligned_cols=118 Identities=17% Similarity=0.183 Sum_probs=78.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
.+.+++.+.++.+++.|++++++|+....... .....|+...-.
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~----------------------------------- 128 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFT----------------------------------- 128 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEE-----------------------------------
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhee-----------------------------------
Confidence 46899999999999999999999999877766 666666532100
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
.++.+... -.....|+--..+.+.+.-....+++|||+.
T Consensus 129 -------------------~~~~~~~~----------------------~~~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~ 167 (207)
T 2go7_A 129 -------------------EILTSQSG----------------------FVRKPSPEAATYLLDKYQLNSDNTYYIGDRT 167 (207)
T ss_dssp -------------------EEECGGGC----------------------CCCTTSSHHHHHHHHHHTCCGGGEEEEESSH
T ss_pred -------------------eEEecCcC----------------------CCCCCCcHHHHHHHHHhCCCcccEEEECCCH
Confidence 01110000 0000112222334444433345699999999
Q ss_pred cChHHhhhcCcc-ccccCccccchhccCcEEecchhhhHHH
Q 001888 679 NDVGMLQEADIG-VGISGVEGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 679 ND~~mlk~AdvG-Ia~~g~e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
||++|++.||++ |+|.+.. . .||+++.++..+..+
T Consensus 168 nDi~~~~~aG~~~i~~~~~~-~----~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 168 LDVEFAQNSGIQSINFLEST-Y----EGNHRIQALADISRI 203 (207)
T ss_dssp HHHHHHHHHTCEEEESSCCS-C----TTEEECSSTTHHHHH
T ss_pred HHHHHHHHCCCeEEEEecCC-C----CCCEEeCCHHHHHHH
Confidence 999999999998 6775443 2 689999988877665
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.96 E-value=9e-06 Score=83.70 Aligned_cols=41 Identities=10% Similarity=0.031 Sum_probs=35.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
.+.+++.+.++.+++.|++++++|+.....+......+|+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 129 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD 129 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch
Confidence 45689999999999999999999999988888777777764
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.95 E-value=1.1e-05 Score=82.22 Aligned_cols=124 Identities=10% Similarity=0.031 Sum_probs=83.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-..+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~--------------------------------- 135 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIV--------------------------------- 135 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeE---------------------------------
Confidence 57899999999999999999999999998888888888874321111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
+.+... -.....|+--..+.+.+.-....+++|||+.
T Consensus 136 ---------------------~~~~~~----------------------~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~ 172 (214)
T 3e58_A 136 ---------------------LSGEEF----------------------KESKPNPEIYLTALKQLNVQASRALIIEDSE 172 (214)
T ss_dssp ---------------------EEGGGC----------------------SSCTTSSHHHHHHHHHHTCCGGGEEEEECSH
T ss_pred ---------------------eecccc----------------------cCCCCChHHHHHHHHHcCCChHHeEEEeccH
Confidence 111000 0001112222333444433346699999999
Q ss_pred cChHHhhhcCccccccCcc-ccchhccCcEEecchhhhHHH
Q 001888 679 NDVGMLQEADIGVGISGVE-GMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~~g~e-~~~ak~~aD~vl~~f~~l~~l 718 (1000)
||+.|.+.||+++.+.+.. .......+|+++.++..+..+
T Consensus 173 ~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~ 213 (214)
T 3e58_A 173 KGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLDL 213 (214)
T ss_dssp HHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGGG
T ss_pred hhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHhh
Confidence 9999999999988653321 111347799999998876543
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.93 E-value=1.2e-05 Score=84.58 Aligned_cols=125 Identities=20% Similarity=0.186 Sum_probs=82.4
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
-++.+++.++++.|++.|++++++|+.....+..+...+|+...-..
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~--------------------------------- 159 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSE--------------------------------- 159 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEE---------------------------------
Confidence 36789999999999999999999999999888888888887432111
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCC
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 677 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG 677 (1000)
++.+... ......|+--..+.+.+.-....+++|||+
T Consensus 160 ---------------------~~~~~~~----------------------~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~ 196 (243)
T 2hsz_A 160 ---------------------MLGGQSL----------------------PEIKPHPAPFYYLCGKFGLYPKQILFVGDS 196 (243)
T ss_dssp ---------------------EECTTTS----------------------SSCTTSSHHHHHHHHHHTCCGGGEEEEESS
T ss_pred ---------------------EEecccC----------------------CCCCcCHHHHHHHHHHhCcChhhEEEEcCC
Confidence 1111000 000011222333344443334569999999
Q ss_pred ccChHHhhhcCccc-cccCc---cccchhccCcEEecchhhhHHH
Q 001888 678 ANDVGMLQEADIGV-GISGV---EGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 678 ~ND~~mlk~AdvGI-a~~g~---e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
.||+.|.+.||+++ ++... .....+..+|+++.++..+..+
T Consensus 197 ~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~ 241 (243)
T 2hsz_A 197 QNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 241 (243)
T ss_dssp HHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred HHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHH
Confidence 99999999999984 44221 1111456799999887776543
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.93 E-value=1.2e-05 Score=83.43 Aligned_cols=126 Identities=10% Similarity=-0.012 Sum_probs=85.3
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-..+
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 145 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHV-------------------------------- 145 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEE--------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEE--------------------------------
Confidence 357899999999999999999999999998888888888874321111
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCC
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 677 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG 677 (1000)
+.+... -.....|+--..+.+.+.-....+++|||+
T Consensus 146 ----------------------~~~~~~----------------------~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~ 181 (233)
T 3umb_A 146 ----------------------LSVDAV----------------------RLYKTAPAAYALAPRAFGVPAAQILFVSSN 181 (233)
T ss_dssp ----------------------EEGGGT----------------------TCCTTSHHHHTHHHHHHTSCGGGEEEEESC
T ss_pred ----------------------EEeccc----------------------CCCCcCHHHHHHHHHHhCCCcccEEEEeCC
Confidence 110000 000111222223333333333569999999
Q ss_pred ccChHHhhhcCcccccc---CccccchhccCcEEecchhhhHHHH
Q 001888 678 ANDVGMLQEADIGVGIS---GVEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 678 ~ND~~mlk~AdvGIa~~---g~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
.||+.|.+.||+++.+- +......+..+|+++.++..+..+|
T Consensus 182 ~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 182 GWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp HHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 99999999999999772 2222224567999999999888874
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.92 E-value=1.5e-05 Score=82.49 Aligned_cols=126 Identities=13% Similarity=0.038 Sum_probs=83.8
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
-++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 141 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDH--------------------------------- 141 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSE---------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcce---------------------------------
Confidence 35789999999999999999999999998888888888877432111
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCC
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 677 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG 677 (1000)
++.+... -.....|.--..+.+.+.-....+++|||+
T Consensus 142 ---------------------~~~~~~~----------------------~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~ 178 (230)
T 3um9_A 142 ---------------------LISVDEV----------------------RLFKPHQKVYELAMDTLHLGESEILFVSCN 178 (230)
T ss_dssp ---------------------EEEGGGT----------------------TCCTTCHHHHHHHHHHHTCCGGGEEEEESC
T ss_pred ---------------------eEehhhc----------------------ccCCCChHHHHHHHHHhCCCcccEEEEeCC
Confidence 1111000 000011222223333333333569999999
Q ss_pred ccChHHhhhcCccccccC---ccccchhccCcEEecchhhhHHHH
Q 001888 678 ANDVGMLQEADIGVGISG---VEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 678 ~ND~~mlk~AdvGIa~~g---~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
.||+.|.+.||+++.+-+ ......+..+|+++.++..+..+|
T Consensus 179 ~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 223 (230)
T 3um9_A 179 SWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRF 223 (230)
T ss_dssp HHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHTC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHHH
Confidence 999999999999987622 222224568999999988877663
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.91 E-value=1.7e-05 Score=82.15 Aligned_cols=125 Identities=16% Similarity=0.153 Sum_probs=83.8
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
-++.+++.++++.|++.|+++.++|+.....+..+.+.+|+...-..
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~--------------------------------- 128 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDL--------------------------------- 128 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheE---------------------------------
Confidence 36789999999999999999999999998888888888887431111
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCC
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 677 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG 677 (1000)
++.+... ......|+-...+.+.+.-....+++|||+
T Consensus 129 ---------------------i~~~~~~----------------------~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~ 165 (222)
T 2nyv_A 129 ---------------------IVGGDTF----------------------GEKKPSPTPVLKTLEILGEEPEKALIVGDT 165 (222)
T ss_dssp ---------------------EECTTSS----------------------CTTCCTTHHHHHHHHHHTCCGGGEEEEESS
T ss_pred ---------------------EEecCcC----------------------CCCCCChHHHHHHHHHhCCCchhEEEECCC
Confidence 1110000 000111333333444443334569999999
Q ss_pred ccChHHhhhcCcc-ccccC-ccccchhccCcEEecchhhhHHHH
Q 001888 678 ANDVGMLQEADIG-VGISG-VEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 678 ~ND~~mlk~AdvG-Ia~~g-~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
.||+.|.+.||++ |++.. ...... ..+|+++.++..+..++
T Consensus 166 ~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 166 DADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp HHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHH
T ss_pred HHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHH
Confidence 9999999999988 55532 211112 67899999988887774
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=4.8e-06 Score=88.82 Aligned_cols=55 Identities=13% Similarity=0.241 Sum_probs=43.7
Q ss_pred hHHHHHHHH-hcCCCEEEEEcC----CccChHHhhhcC-ccccccCccccchhccCcEEecc
Q 001888 656 QKALVTRLV-KGTGKTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 656 qK~~iV~~l-~~~~~~vlaiGD----G~ND~~mlk~Ad-vGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
.|+..++.+ .-....|+|||| |.||++||+.|+ +|++|.++.. .++..||++...
T Consensus 197 sKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~-~~k~~a~~v~~~ 257 (262)
T 2fue_A 197 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQD-TVQRCREIFFPE 257 (262)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHH-HHHHHHHHHCTT
T ss_pred CHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCH-HHHHhhheeCCC
Confidence 599988888 223368999999 999999999999 5999965543 378888887654
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=5.1e-06 Score=87.58 Aligned_cols=43 Identities=21% Similarity=0.357 Sum_probs=35.8
Q ss_pred hHHHHHHHHhcCCCEEEEEcC----CccChHHhhhcC-ccccccCccc
Q 001888 656 QKALVTRLVKGTGKTTLAIGD----GANDVGMLQEAD-IGVGISGVEG 698 (1000)
Q Consensus 656 qK~~iV~~l~~~~~~vlaiGD----G~ND~~mlk~Ad-vGIa~~g~e~ 698 (1000)
.|+..++.+.+....|+|+|| |.||++||+.|+ +|++|++.+.
T Consensus 187 ~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~ 234 (246)
T 3f9r_A 187 DKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKD 234 (246)
T ss_dssp SGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHH
T ss_pred CHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHH
Confidence 699999998336688999999 799999999886 7888866543
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.88 E-value=1.7e-05 Score=82.49 Aligned_cols=118 Identities=15% Similarity=0.158 Sum_probs=74.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.+.++.|++.|+++.++|+... +..+...+|+...-..
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~---------------------------------- 135 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHA---------------------------------- 135 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSE----------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCE----------------------------------
Confidence 4789999999999999999999999754 6666777776321110
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
++.+... -.....|+--..+.+.+.-....+++|||+.
T Consensus 136 --------------------i~~~~~~----------------------~~~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~ 173 (233)
T 3nas_A 136 --------------------IVDPTTL----------------------AKGKPDPDIFLTAAAMLDVSPADCAAIEDAE 173 (233)
T ss_dssp --------------------ECCC-------------------------------CCHHHHHHHHHTSCGGGEEEEECSH
T ss_pred --------------------EeeHhhC----------------------CCCCCChHHHHHHHHHcCCCHHHEEEEeCCH
Confidence 1111000 0001112222333444433346799999999
Q ss_pred cChHHhhhcCccccccCccccchhccCcEEecchhhhH
Q 001888 679 NDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLE 716 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~~l~ 716 (1000)
||+.|.+.||+++++.+.... .+ .||+++.++..+.
T Consensus 174 ~Di~~a~~aG~~~~~~~~~~~-~~-~ad~v~~s~~el~ 209 (233)
T 3nas_A 174 AGISAIKSAGMFAVGVGQGQP-ML-GADLVVRQTSDLT 209 (233)
T ss_dssp HHHHHHHHTTCEEEECC---------CSEECSSGGGCC
T ss_pred HHHHHHHHcCCEEEEECCccc-cc-cCCEEeCChHhCC
Confidence 999999999999987655432 34 8999999877654
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.86 E-value=3.1e-05 Score=80.34 Aligned_cols=121 Identities=15% Similarity=0.116 Sum_probs=80.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~-------------------------------- 150 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSII-------------------------------- 150 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEE--------------------------------
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEE--------------------------------
Confidence 578999999999999999999999999888888888888743211111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCC-EEEEEcCC
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGK-TTLAIGDG 677 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~-~vlaiGDG 677 (1000)
.+... -.....|+--..+.+.+.-... .+++|||+
T Consensus 151 ----------------------~~~~~----------------------~~~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~ 186 (231)
T 3kzx_A 151 ----------------------GSGDT----------------------GTIKPSPEPVLAALTNINIEPSKEVFFIGDS 186 (231)
T ss_dssp ----------------------EETSS----------------------SCCTTSSHHHHHHHHHHTCCCSTTEEEEESS
T ss_pred ----------------------ccccc----------------------CCCCCChHHHHHHHHHcCCCcccCEEEEcCC
Confidence 00000 0001112222334444433334 79999999
Q ss_pred ccChHHhhhcCc-cccccCccccchhccCcEEecchhhhHHHH
Q 001888 678 ANDVGMLQEADI-GVGISGVEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 678 ~ND~~mlk~Adv-GIa~~g~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
.||+.|.+.||+ +|.+.+... ..+|+++.++..+..+|
T Consensus 187 ~~Di~~a~~aG~~~v~~~~~~~----~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 187 ISDIQSAIEAGCLPIKYGSTNI----IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp HHHHHHHHHTTCEEEEECC---------CCEEESSHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEECCCCC----CCCceeeCCHHHHHHHH
Confidence 999999999998 456643332 46889999988887764
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.84 E-value=3.2e-05 Score=80.11 Aligned_cols=125 Identities=12% Similarity=0.090 Sum_probs=80.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCc---hhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDK---METAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESV 595 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~---~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1000)
.+.+++.+.++.|++.|+++.++|+.. ...+.......|+...-..
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~------------------------------- 147 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDK------------------------------- 147 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSE-------------------------------
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhh-------------------------------
Confidence 458999999999999999999999998 7777777777776321111
Q ss_pred HHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEc
Q 001888 596 TKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIG 675 (1000)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiG 675 (1000)
++.+... -.....|+--..+.+.+.-....+++||
T Consensus 148 -----------------------~~~~~~~----------------------~~~kp~~~~~~~~~~~lgi~~~~~~~iG 182 (235)
T 2om6_A 148 -----------------------TFFADEV----------------------LSYKPRKEMFEKVLNSFEVKPEESLHIG 182 (235)
T ss_dssp -----------------------EEEHHHH----------------------TCCTTCHHHHHHHHHHTTCCGGGEEEEE
T ss_pred -----------------------heecccc----------------------CCCCCCHHHHHHHHHHcCCCccceEEEC
Confidence 0110000 0000112111222222322235799999
Q ss_pred CCc-cChHHhhhcCcccccc--CccccchhccCcEEecchhhhHHHH
Q 001888 676 DGA-NDVGMLQEADIGVGIS--GVEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 676 DG~-ND~~mlk~AdvGIa~~--g~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
|+. ||+.|.+.||+++++- +......+..+|+++.++..+..+|
T Consensus 183 D~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 229 (235)
T 2om6_A 183 DTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDVI 229 (235)
T ss_dssp SCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHHH
T ss_pred CChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHHH
Confidence 999 9999999999998772 2222224456899999888877663
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.83 E-value=1.3e-05 Score=82.30 Aligned_cols=47 Identities=4% Similarity=-0.003 Sum_probs=38.3
Q ss_pred CCEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchhhhH
Q 001888 668 GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLE 716 (1000)
Q Consensus 668 ~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~~l~ 716 (1000)
...+++|||+.||+.|++.||++++|.+... ..+ .||+++.++..+.
T Consensus 162 ~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~-~a~~v~~~~~el~ 208 (221)
T 2wf7_A 162 PSESIGLEDSQAGIQAIKDSGALPIGVGRPE-DLG-DDIVIVPDTSHYT 208 (221)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEESCHH-HHC-SSSEEESSGGGCC
T ss_pred hhHeEEEeCCHHHHHHHHHCCCEEEEECCHH-Hhc-cccchhcCHHhCC
Confidence 3569999999999999999999998866543 255 8999998876643
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=97.81 E-value=1.6e-05 Score=84.75 Aligned_cols=40 Identities=30% Similarity=0.302 Sum_probs=34.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~ 142 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL 142 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 4679999999999999999999999988777777666654
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=2e-05 Score=84.74 Aligned_cols=128 Identities=15% Similarity=0.107 Sum_probs=82.5
Q ss_pred cccCCcHHHHHHHHHcCC--eEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGI--KVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 596 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGI--kv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1000)
++.+++.++++.|++.|+ +++++|+.....+..+...+|+...-..++ ...
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~--~~~------------------------- 194 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLT--YCD------------------------- 194 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEE--CCC-------------------------
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEE--Eec-------------------------
Confidence 567899999999999999 999999999888888888888743211111 000
Q ss_pred HHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCC-CEEEEEc
Q 001888 597 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTG-KTTLAIG 675 (1000)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~-~~vlaiG 675 (1000)
... ..+..+...|+--..+.+.+.-.. ..+++||
T Consensus 195 ---------------------------~~~------------------~~~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vG 229 (282)
T 3nuq_A 195 ---------------------------YSR------------------TDTLVCKPHVKAFEKAMKESGLARYENAYFID 229 (282)
T ss_dssp ---------------------------CSS------------------CSSCCCTTSHHHHHHHHHHHTCCCGGGEEEEE
T ss_pred ---------------------------cCC------------------CcccCCCcCHHHHHHHHHHcCCCCcccEEEEc
Confidence 000 000000111222222333333333 6799999
Q ss_pred CCccChHHhhhcCccccccCcccc-----chhccCcEEecchhhhHHH
Q 001888 676 DGANDVGMLQEADIGVGISGVEGM-----QAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 676 DG~ND~~mlk~AdvGIa~~g~e~~-----~ak~~aD~vl~~f~~l~~l 718 (1000)
|+.||+.|.+.||+|++|...... .....||+++.++..+..+
T Consensus 230 D~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 230 DSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp SCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred CCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 999999999999998766333221 1244789999998887765
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.79 E-value=2e-05 Score=83.08 Aligned_cols=52 Identities=23% Similarity=0.289 Sum_probs=40.5
Q ss_pred hHHHHHHHH-hcCCCEEEEEcC----CccChHHhhhcCc-cccccCccccchhccCcEE
Q 001888 656 QKALVTRLV-KGTGKTTLAIGD----GANDVGMLQEADI-GVGISGVEGMQAVMSSDYA 708 (1000)
Q Consensus 656 qK~~iV~~l-~~~~~~vlaiGD----G~ND~~mlk~Adv-GIa~~g~e~~~ak~~aD~v 708 (1000)
.|+..++.+ .-....|+|||| |.||++||+.|+. |++|+++... +|..||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~-vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDT-RRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHH-HHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHH-HHHHHhhc
Confidence 588888888 223478999999 9999999999987 9999776544 88888886
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.78 E-value=3.9e-05 Score=76.30 Aligned_cols=61 Identities=16% Similarity=0.096 Sum_probs=41.7
Q ss_pred HHHHHhcCCCEEEEEcCCccChHHhhhcCc---cccccCccccch---hccCcEEecchhhhHHHHH
Q 001888 660 VTRLVKGTGKTTLAIGDGANDVGMLQEADI---GVGISGVEGMQA---VMSSDYAIAQFRFLERLLL 720 (1000)
Q Consensus 660 iV~~l~~~~~~vlaiGDG~ND~~mlk~Adv---GIa~~g~e~~~a---k~~aD~vl~~f~~l~~lll 720 (1000)
+.+.+.-....+++|||+.||+.|.+.||+ +|..+....... ...+|+++.++..+..+|+
T Consensus 110 ~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 110 IARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp HHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 333343334669999999999999999996 454432222111 2468999999998888754
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.78 E-value=1.9e-05 Score=88.45 Aligned_cols=41 Identities=7% Similarity=0.158 Sum_probs=38.9
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
-++.|++.+.|+.|+++|++|+|+||.....+..+|.++|+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 35789999999999999999999999999999999999986
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=5.3e-05 Score=79.14 Aligned_cols=124 Identities=16% Similarity=0.106 Sum_probs=81.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-..+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~--------------------------------- 151 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSC--------------------------------- 151 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEE---------------------------------
Confidence 57899999999999999999999999988888888888874321111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
+.+... -.....|+--..+.+.+.-....+++|||+.
T Consensus 152 ---------------------~~~~~~----------------------~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~ 188 (240)
T 2no4_A 152 ---------------------LSADDL----------------------KIYKPDPRIYQFACDRLGVNPNEVCFVSSNA 188 (240)
T ss_dssp ---------------------EEGGGT----------------------TCCTTSHHHHHHHHHHHTCCGGGEEEEESCH
T ss_pred ---------------------EEcccc----------------------CCCCCCHHHHHHHHHHcCCCcccEEEEeCCH
Confidence 110000 0001112222233333332335689999999
Q ss_pred cChHHhhhcCccc---cccCccccchhccC-cEEecchhhhHHHH
Q 001888 679 NDVGMLQEADIGV---GISGVEGMQAVMSS-DYAIAQFRFLERLL 719 (1000)
Q Consensus 679 ND~~mlk~AdvGI---a~~g~e~~~ak~~a-D~vl~~f~~l~~ll 719 (1000)
||+.|.+.||+++ ...+. ....+..+ |+++.++..+..+|
T Consensus 189 ~Di~~a~~aG~~~~~v~~~~~-~~~~~~~~~~~~~~~~~el~~~l 232 (240)
T 2no4_A 189 WDLGGAGKFGFNTVRINRQGN-PPEYEFAPLKHQVNSLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHTCEEEEECTTCC-CCCCTTSCCSEEESSGGGHHHHH
T ss_pred HHHHHHHHCCCEEEEECCCCC-CCcccCCCCceeeCCHHHHHHHH
Confidence 9999999999664 32222 22234557 99999988877663
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.76 E-value=3.7e-05 Score=79.76 Aligned_cols=41 Identities=22% Similarity=0.201 Sum_probs=36.4
Q ss_pred cccCCcHHHHHHHHHc-CCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQA-GIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~a-GIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+++.+.++.|++. |+++.++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 4679999999999999 9999999999988888888877764
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.74 E-value=6.6e-05 Score=77.80 Aligned_cols=123 Identities=15% Similarity=0.191 Sum_probs=82.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.+.++.|++. +++.++|+.....+..+...+|+...-..
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~---------------------------------- 144 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDS---------------------------------- 144 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcce----------------------------------
Confidence 4679999999999999 99999999998888888888877432111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
++.+... -.....|+--..+.+.+.-....+++|||+.
T Consensus 145 --------------------~~~~~~~----------------------~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~ 182 (234)
T 3u26_A 145 --------------------ITTSEEA----------------------GFFKPHPRIFELALKKAGVKGEEAVYVGDNP 182 (234)
T ss_dssp --------------------EEEHHHH----------------------TBCTTSHHHHHHHHHHHTCCGGGEEEEESCT
T ss_pred --------------------eEecccc----------------------CCCCcCHHHHHHHHHHcCCCchhEEEEcCCc
Confidence 1110000 0001112222233333433346799999997
Q ss_pred -cChHHhhhcCc---cccccCccccchhccCcEEecchhhhHHHH
Q 001888 679 -NDVGMLQEADI---GVGISGVEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 679 -ND~~mlk~Adv---GIa~~g~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
||+.|.+.||+ +|++.+... ..+..+|+++.++..+..+|
T Consensus 183 ~~Di~~a~~aG~~~~~v~~~~~~~-~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 183 VKDCGGSKNLGMTSILLDRKGEKR-EFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp TTTHHHHHTTTCEEEEECSSSTTG-GGGGGCSEEESSTHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCCcc-ccccCCCEeeCCHHHHHHHH
Confidence 99999999995 566544332 25568999999988887764
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.74 E-value=4e-05 Score=79.57 Aligned_cols=124 Identities=11% Similarity=0.078 Sum_probs=81.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-..+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~--------------------------------- 141 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHL--------------------------------- 141 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheE---------------------------------
Confidence 57899999999999999999999999988888888888874321111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
+.+... -.....|+--..+.+.+.-....+++|||+.
T Consensus 142 ---------------------~~~~~~----------------------~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~ 178 (232)
T 1zrn_A 142 ---------------------LSVDPV----------------------QVYKPDNRVYELAEQALGLDRSAILFVASNA 178 (232)
T ss_dssp ---------------------EESGGG----------------------TCCTTSHHHHHHHHHHHTSCGGGEEEEESCH
T ss_pred ---------------------EEeccc----------------------CCCCCCHHHHHHHHHHcCCCcccEEEEeCCH
Confidence 111000 0001112222333344432335689999999
Q ss_pred cChHHhhhcCccccccCc---cccchhccCcEEecchhhhHHH
Q 001888 679 NDVGMLQEADIGVGISGV---EGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~~g~---e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
||+.|.+.||+++.+-.. .....+..+|+++.++..+..+
T Consensus 179 ~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 221 (232)
T 1zrn_A 179 WDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL 221 (232)
T ss_dssp HHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred HHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHH
Confidence 999999999999865221 1112346789999887776554
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.72 E-value=9.5e-05 Score=76.29 Aligned_cols=41 Identities=27% Similarity=0.252 Sum_probs=35.7
Q ss_pred cccCCcHHHHHHHHHcC-CeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAG-IKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aG-Ikv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+++.+.++.|++.| +++.++|+.....+..+...+|+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~ 146 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLS 146 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCG
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcH
Confidence 57899999999999999 999999998887777777777763
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.69 E-value=3.8e-05 Score=82.00 Aligned_cols=41 Identities=32% Similarity=0.167 Sum_probs=35.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~ 151 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ 151 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc
Confidence 57799999999999999999999999988887777776653
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.66 E-value=5.1e-05 Score=79.31 Aligned_cols=137 Identities=12% Similarity=0.111 Sum_probs=86.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.|++.++++.|+++|+++.++|+.....+..+.. |+... ..++.-......
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~------------------------ 129 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDN------------------------ 129 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSS------------------------
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcC------------------------
Confidence 688999999999999999999999999888887776 65432 222211110000
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
.. +++..- +.....+.+.....|..+++.+......+++|||+.
T Consensus 130 ---------------~~----~~~~~~-----------------kp~p~~~~~~~~~~K~~~~~~~~~~~~~~~~vGDs~ 173 (236)
T 2fea_A 130 ---------------DY----IHIDWP-----------------HSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSV 173 (236)
T ss_dssp ---------------SB----CEEECT-----------------TCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCG
T ss_pred ---------------Cc----eEEecC-----------------CCCccccccccCCcHHHHHHHHhccCCeEEEEeCCh
Confidence 00 000000 000000111124468888888865667899999999
Q ss_pred cChHHhhhcCccccccCccccchhc--cCcEEecchhhhHHHH
Q 001888 679 NDVGMLQEADIGVGISGVEGMQAVM--SSDYAIAQFRFLERLL 719 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~~g~e~~~ak~--~aD~vl~~f~~l~~ll 719 (1000)
+|+.|.+.||+.+...+.. ..... .+|+++.++..+..+|
T Consensus 174 ~Di~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~~el~~~l 215 (236)
T 2fea_A 174 TDVEAAKLSDLCFARDYLL-NECREQNLNHLPYQDFYEIRKEI 215 (236)
T ss_dssp GGHHHHHTCSEEEECHHHH-HHHHHTTCCEECCSSHHHHHHHH
T ss_pred HHHHHHHhCCeeeechHHH-HHHHHCCCCeeecCCHHHHHHHH
Confidence 9999999999988543221 11222 2789998888887763
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.64 E-value=4e-05 Score=81.15 Aligned_cols=41 Identities=15% Similarity=0.072 Sum_probs=36.8
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
-++.+++.++++.|++.|++++++|+.....+..+.+..|+
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l 149 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGL 149 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcCh
Confidence 45789999999999999999999999998888888888776
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.64 E-value=0.0001 Score=76.61 Aligned_cols=119 Identities=18% Similarity=0.167 Sum_probs=81.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.++++.|+ .|++++++|+.....+......+|+...-..+
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~--------------------------------- 152 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKI--------------------------------- 152 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEE---------------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeE---------------------------------
Confidence 56899999999999 99999999999888888887777764321111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcC---CCEEEEE
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGT---GKTTLAI 674 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~---~~~vlai 674 (1000)
+.+.... . ..-|..+.+.+ +.. ...+++|
T Consensus 153 ---------------------~~~~~~~------------------------~--~kp~~~~~~~~~~~lgi~~~~~~~i 185 (240)
T 3qnm_A 153 ---------------------ILSEDLG------------------------V--LKPRPEIFHFALSATQSELRESLMI 185 (240)
T ss_dssp ---------------------EEGGGTT------------------------C--CTTSHHHHHHHHHHTTCCGGGEEEE
T ss_pred ---------------------EEeccCC------------------------C--CCCCHHHHHHHHHHcCCCcccEEEE
Confidence 1100000 0 11122222222 333 3579999
Q ss_pred cCCc-cChHHhhhcCccccccCccc-cchhccCcEEecchhhhHHH
Q 001888 675 GDGA-NDVGMLQEADIGVGISGVEG-MQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 675 GDG~-ND~~mlk~AdvGIa~~g~e~-~~ak~~aD~vl~~f~~l~~l 718 (1000)
||+. ||+.|.+.||+++++.+... ......+|+++.++..+..+
T Consensus 186 GD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~ 231 (240)
T 3qnm_A 186 GDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNL 231 (240)
T ss_dssp ESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHH
T ss_pred CCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHH
Confidence 9995 99999999999997744333 12567899999998888776
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.63 E-value=9.8e-05 Score=75.49 Aligned_cols=117 Identities=15% Similarity=0.121 Sum_probs=79.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.|++.+.++.|++ |+++.++|+.....+..+.+.+|+...-..
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~---------------------------------- 128 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDG---------------------------------- 128 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheee----------------------------------
Confidence 577999999999999 999999999988888888888887432111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCC---CEEEEE
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 674 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~---~~vlai 674 (1000)
++++...+.-|..+.+.+ ++.| ..+++|
T Consensus 129 ------------------------------------------------i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~v 160 (210)
T 2ah5_A 129 ------------------------------------------------IYGSSPEAPHKADVIHQALQTHQLAPEQAIII 160 (210)
T ss_dssp ------------------------------------------------EEEECSSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred ------------------------------------------------eecCCCCCCCChHHHHHHHHHcCCCcccEEEE
Confidence 122211112233344333 4443 569999
Q ss_pred cCCccChHHhhhcCc---cccccCccccchh-ccCcEEecchhhhHHH
Q 001888 675 GDGANDVGMLQEADI---GVGISGVEGMQAV-MSSDYAIAQFRFLERL 718 (1000)
Q Consensus 675 GDG~ND~~mlk~Adv---GIa~~g~e~~~ak-~~aD~vl~~f~~l~~l 718 (1000)
||+.||+.|.+.||+ +|+.........+ ..+|+++.++..+..+
T Consensus 161 gDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~ 208 (210)
T 2ah5_A 161 GDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp ESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred CCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 999999999999999 5554332121122 3589999988776654
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.58 E-value=6.2e-05 Score=78.77 Aligned_cols=125 Identities=10% Similarity=0.036 Sum_probs=75.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccC--ceEEEEecCCchhhHhhhhccHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQE--MKQIVITLDSPDMEALEKQGDKENITKVSLESV 595 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1000)
.++.+++.+.++.|++.|++++++|+.....+...... |+...- ..
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~------------------------------- 154 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANL------------------------------- 154 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGG-------------------------------
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCe-------------------------------
Confidence 46789999999999999999999999877665555555 553210 00
Q ss_pred HHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEc
Q 001888 596 TKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIG 675 (1000)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiG 675 (1000)
++.+... -.....|+--..+.+.+.-....+++||
T Consensus 155 -----------------------~~~~~~~----------------------~~~kp~~~~~~~~~~~lg~~~~~~i~vG 189 (247)
T 3dv9_A 155 -----------------------MVTAFDV----------------------KYGKPNPEPYLMALKKGGFKPNEALVIE 189 (247)
T ss_dssp -----------------------EECGGGC----------------------SSCTTSSHHHHHHHHHHTCCGGGEEEEE
T ss_pred -----------------------EEecccC----------------------CCCCCCCHHHHHHHHHcCCChhheEEEe
Confidence 1111000 0001112222233344433335699999
Q ss_pred CCccChHHhhhcCccc-cccCcccc--c-hhccCcEEecchhhhHHHH
Q 001888 676 DGANDVGMLQEADIGV-GISGVEGM--Q-AVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 676 DG~ND~~mlk~AdvGI-a~~g~e~~--~-ak~~aD~vl~~f~~l~~ll 719 (1000)
|+.||+.|.+.||++. ++...... . ....||+++.++..+..+|
T Consensus 190 D~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l 237 (247)
T 3dv9_A 190 NAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNW 237 (247)
T ss_dssp CSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHH
T ss_pred CCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 9999999999999763 44322111 1 1237999999988877663
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00021 Score=74.57 Aligned_cols=41 Identities=12% Similarity=0.092 Sum_probs=36.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 46799999999999999999999999888888888888864
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.54 E-value=3.6e-05 Score=78.49 Aligned_cols=122 Identities=13% Similarity=0.159 Sum_probs=78.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.+.++.|++. +++.++|+.....+..+.+.+|+...-.
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~----------------------------------- 126 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMA----------------------------------- 126 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEE-----------------------------------
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhcc-----------------------------------
Confidence 5789999999999999 9999999999888888877777632100
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
.++.+... -...-.|+--..+.+.+.-....+++|||+.
T Consensus 127 -------------------~~~~~~~~----------------------~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~ 165 (209)
T 2hdo_A 127 -------------------VTISADDT----------------------PKRKPDPLPLLTALEKVNVAPQNALFIGDSV 165 (209)
T ss_dssp -------------------EEECGGGS----------------------SCCTTSSHHHHHHHHHTTCCGGGEEEEESSH
T ss_pred -------------------EEEecCcC----------------------CCCCCCcHHHHHHHHHcCCCcccEEEECCCh
Confidence 01111000 0000112222233333332335699999999
Q ss_pred cChHHhhhcCccccccC--cc-ccchhccCcEEecchhhhHHH
Q 001888 679 NDVGMLQEADIGVGISG--VE-GMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~~g--~e-~~~ak~~aD~vl~~f~~l~~l 718 (1000)
||+.|.+.||+++.+.+ .. ....+. +|+++.++..+..+
T Consensus 166 ~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~~~el~~~ 207 (209)
T 2hdo_A 166 SDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQKPLDILEL 207 (209)
T ss_dssp HHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESSGGGGGGG
T ss_pred hhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCCHHHHHHh
Confidence 99999999999986532 11 122344 99999887776543
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.54 E-value=6.2e-05 Score=78.79 Aligned_cols=52 Identities=12% Similarity=-0.003 Sum_probs=37.8
Q ss_pred CCEEEEEcCCccChHHhhhcCccc-cccCcccc--c-hhccCcEEecchhhhHHHH
Q 001888 668 GKTTLAIGDGANDVGMLQEADIGV-GISGVEGM--Q-AVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 668 ~~~vlaiGDG~ND~~mlk~AdvGI-a~~g~e~~--~-ak~~aD~vl~~f~~l~~ll 719 (1000)
...+++|||+.||+.|.+.||++. ++...... . ....||+++.++..+..+|
T Consensus 183 ~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l 238 (243)
T 3qxg_A 183 ADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSW 238 (243)
T ss_dssp GGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHHH
T ss_pred HHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 356999999999999999999954 44322211 0 1236999999988877663
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00019 Score=74.46 Aligned_cols=120 Identities=18% Similarity=0.153 Sum_probs=81.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.++++.|++. +++.++|+.....+......+|+...-..+
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~--------------------------------- 148 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDI--------------------------------- 148 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheE---------------------------------
Confidence 5789999999999999 999999999988888888888774321111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCC----CEEEE
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG----KTTLA 673 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~----~~vla 673 (1000)
+.+.... . ..-|..+.+.+ +..| ..+++
T Consensus 149 ---------------------~~~~~~~------------------------~--~kp~~~~~~~~~~~~g~~~~~~~i~ 181 (238)
T 3ed5_A 149 ---------------------FVSEDTG------------------------F--QKPMKEYFNYVFERIPQFSAEHTLI 181 (238)
T ss_dssp ---------------------EEGGGTT------------------------S--CTTCHHHHHHHHHTSTTCCGGGEEE
T ss_pred ---------------------EEecccC------------------------C--CCCChHHHHHHHHHcCCCChhHeEE
Confidence 1100000 0 11122333333 4444 56999
Q ss_pred EcCCc-cChHHhhhcCccc-cccC-ccccchhccCcEEecchhhhHHHH
Q 001888 674 IGDGA-NDVGMLQEADIGV-GISG-VEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 674 iGDG~-ND~~mlk~AdvGI-a~~g-~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
|||+. ||+.|.+.||++. .+.. ......+..+|+++.++..+..+|
T Consensus 182 vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 182 IGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp EESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred ECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 99998 9999999999964 3322 212225678999999999988874
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00016 Score=75.63 Aligned_cols=40 Identities=18% Similarity=0.150 Sum_probs=35.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
++.+++.++++.|+++|+++.++|+.....+..+...+|+
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l 149 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFP 149 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHST
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4679999999999999999999999988877777777776
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.50 E-value=4e-05 Score=80.63 Aligned_cols=50 Identities=14% Similarity=0.141 Sum_probs=39.3
Q ss_pred CEEEEEcCCccChHHhhhcC---ccccccCccccchhccCcEEecchhhhHHHH
Q 001888 669 KTTLAIGDGANDVGMLQEAD---IGVGISGVEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 669 ~~vlaiGDG~ND~~mlk~Ad---vGIa~~g~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
..+++|||+.||+.|.+.|| ++|+..+.. ...+..||+++.++..+...|
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~-~~~~~~ad~v~~sl~el~~~l 243 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDGNLS-RDLTTKATLVLNSLQDFQPEL 243 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCTTSC-GGGSTTSSEECSCGGGCCGGG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCc-hhhcccccEeecCHHHhhHHH
Confidence 67999999999999999999 455554433 236788999999988876553
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00026 Score=76.32 Aligned_cols=57 Identities=21% Similarity=0.212 Sum_probs=45.5
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchh
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 713 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~ 713 (1000)
.|...++.+ +..| ..++++||+.||++|++.|++||++.+.... .+..||+++.+..
T Consensus 211 ~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~-~~~~a~~v~~~~~ 271 (289)
T 3gyg_A 211 GKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQE-AKNLHNLITDSEY 271 (289)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHH-HHHHCCCBCSSCH
T ss_pred CHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHH-HHHhCCEEcCCCC
Confidence 588877777 5544 4699999999999999999999999665433 7788999887633
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0002 Score=75.54 Aligned_cols=39 Identities=15% Similarity=0.204 Sum_probs=35.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+++.++++.|+ |+++.++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~ 131 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT 131 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch
Confidence 67899999999999 9999999999998888888888874
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00023 Score=72.84 Aligned_cols=60 Identities=17% Similarity=0.229 Sum_probs=40.0
Q ss_pred HHHHHhcCCCEEEEEcCCccChHHhhhcCcc--cccc-Cccc-cchhccCcEEecchhhhHHHH
Q 001888 660 VTRLVKGTGKTTLAIGDGANDVGMLQEADIG--VGIS-GVEG-MQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 660 iV~~l~~~~~~vlaiGDG~ND~~mlk~AdvG--Ia~~-g~e~-~~ak~~aD~vl~~f~~l~~ll 719 (1000)
+.+.+.-....+++|||+.||+.|.+.||+. |++. |... ......+|+++.++..+..++
T Consensus 140 ~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~l 203 (211)
T 2gmw_A 140 ARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAI 203 (211)
T ss_dssp HHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred HHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHHH
Confidence 3344432335689999999999999999965 4432 2111 112345899999988887763
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00024 Score=71.90 Aligned_cols=121 Identities=15% Similarity=0.096 Sum_probs=79.2
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
-++.+++.+ ++.|++. +++.++|+.....+..+...+|+...-..
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 117 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKG--------------------------------- 117 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcE---------------------------------
Confidence 357799999 9999999 99999999998888888888887432111
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCC
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 677 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG 677 (1000)
++.+... -.....|+--..+.+.+. ...+++|||+
T Consensus 118 ---------------------~~~~~~~----------------------~~~Kp~~~~~~~~~~~~~--~~~~~~vGD~ 152 (201)
T 2w43_A 118 ---------------------IFSAESV----------------------KEYKPSPKVYKYFLDSIG--AKEAFLVSSN 152 (201)
T ss_dssp ---------------------EEEGGGG----------------------TCCTTCHHHHHHHHHHHT--CSCCEEEESC
T ss_pred ---------------------EEehhhc----------------------CCCCCCHHHHHHHHHhcC--CCcEEEEeCC
Confidence 1111100 000111222223333334 4678999999
Q ss_pred ccChHHhhhcCccccccC---ccccchhccCcEEecchhhhHHH
Q 001888 678 ANDVGMLQEADIGVGISG---VEGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 678 ~ND~~mlk~AdvGIa~~g---~e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
.||+.|.+.||+++.+-. .........+|+++.++..+..+
T Consensus 153 ~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 196 (201)
T 2w43_A 153 AFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEW 196 (201)
T ss_dssp HHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHH
T ss_pred HHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHH
Confidence 999999999999875421 11111345689999988877666
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00024 Score=73.54 Aligned_cols=52 Identities=10% Similarity=-0.011 Sum_probs=40.5
Q ss_pred CCEEEEEcCCc-cChHHhhhcCccccccCcc----------ccchhccCcEEecchhhhHHHH
Q 001888 668 GKTTLAIGDGA-NDVGMLQEADIGVGISGVE----------GMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 668 ~~~vlaiGDG~-ND~~mlk~AdvGIa~~g~e----------~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
...+++|||+. ||+.|.+.||+++.+.+.. ....+..+|+++.++..+..+|
T Consensus 172 ~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l 234 (240)
T 3smv_A 172 KKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAH 234 (240)
T ss_dssp GGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHH
T ss_pred chhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHH
Confidence 35699999996 9999999999998773322 1223578999999988877764
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00022 Score=74.76 Aligned_cols=120 Identities=8% Similarity=0.011 Sum_probs=81.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.++++.|++. +++.++|+.....+..+...+|+.-. .
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~--------~---------------------------- 158 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWD--------V---------------------------- 158 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCS--------C----------------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCee--------E----------------------------
Confidence 5679999999999997 99999999998888888888776300 0
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCC---CEEEEE
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 674 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~---~~vlai 674 (1000)
++.+.. + ....| |..+++.+ +..| ..+++|
T Consensus 159 --------------------~~~~~~-----------------------~-~~~kp--~~~~~~~~~~~lgi~~~~~~~i 192 (254)
T 3umg_A 159 --------------------IIGSDI-----------------------N-RKYKP--DPQAYLRTAQVLGLHPGEVMLA 192 (254)
T ss_dssp --------------------CCCHHH-----------------------H-TCCTT--SHHHHHHHHHHTTCCGGGEEEE
T ss_pred --------------------EEEcCc-----------------------C-CCCCC--CHHHHHHHHHHcCCChHHEEEE
Confidence 000000 0 00011 12233333 3333 569999
Q ss_pred cCCccChHHhhhcCccccccCccc-------cc--hhccCcEEecchhhhHHHHHH
Q 001888 675 GDGANDVGMLQEADIGVGISGVEG-------MQ--AVMSSDYAIAQFRFLERLLLV 721 (1000)
Q Consensus 675 GDG~ND~~mlk~AdvGIa~~g~e~-------~~--ak~~aD~vl~~f~~l~~lll~ 721 (1000)
||+.||+.|.+.||+++++.+... .. .+..+|+++.++..+..+|..
T Consensus 193 GD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 193 AAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRA 248 (254)
T ss_dssp ESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHH
T ss_pred eCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcC
Confidence 999999999999999997744211 01 256789999999999888543
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00022 Score=76.31 Aligned_cols=40 Identities=15% Similarity=-0.069 Sum_probs=35.0
Q ss_pred cccCCcHHHHHHHHHc-CCeEEEEcCCchhhHHHHHHHcCc
Q 001888 519 KLQKGVPECIDKLAQA-GIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~a-GIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
.+.+++.+.++.|++. |+++.++|+.....+.......|+
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l 154 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKI 154 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 4679999999999999 999999999998888777777766
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00023 Score=75.53 Aligned_cols=124 Identities=11% Similarity=0.053 Sum_probs=81.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.++++.|++.|+++.++|+... .+..+...+|+...-..
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~---------------------------------- 150 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDF---------------------------------- 150 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSC----------------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhE----------------------------------
Confidence 4779999999999999999999999665 45677777776432111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
++.+... -.....|+--..+.+.+.-....+++|||+.
T Consensus 151 --------------------~~~~~~~----------------------~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~ 188 (263)
T 3k1z_A 151 --------------------VLTSEAA----------------------GWPKPDPRIFQEALRLAHMEPVVAAHVGDNY 188 (263)
T ss_dssp --------------------EEEHHHH----------------------SSCTTSHHHHHHHHHHHTCCGGGEEEEESCH
T ss_pred --------------------EEeeccc----------------------CCCCCCHHHHHHHHHHcCCCHHHEEEECCCc
Confidence 1110000 0011123333334444433346799999997
Q ss_pred -cChHHhhhcCccccccCcccc--c---hhccCcEEecchhhhHHHH
Q 001888 679 -NDVGMLQEADIGVGISGVEGM--Q---AVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 679 -ND~~mlk~AdvGIa~~g~e~~--~---ak~~aD~vl~~f~~l~~ll 719 (1000)
||+.|.+.||+++.+.+.... . ....+|+++.++..+..+|
T Consensus 189 ~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 189 LCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp HHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred HHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHH
Confidence 999999999999866433221 0 1236999999998888775
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00024 Score=74.64 Aligned_cols=122 Identities=10% Similarity=0.061 Sum_probs=79.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.++++.|++. ++++++|+.....+..+...+|+.- ..
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f---~~--------------------------------- 162 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW---DM--------------------------------- 162 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC---SE---------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc---ce---------------------------------
Confidence 5679999999999985 9999999998888888888777630 00
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
++.+... -.....|.--..+.+.+.-....|++|||+.
T Consensus 163 --------------------~~~~~~~----------------------~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~ 200 (254)
T 3umc_A 163 --------------------LLCADLF----------------------GHYKPDPQVYLGACRLLDLPPQEVMLCAAHN 200 (254)
T ss_dssp --------------------ECCHHHH----------------------TCCTTSHHHHHHHHHHHTCCGGGEEEEESCH
T ss_pred --------------------EEeeccc----------------------ccCCCCHHHHHHHHHHcCCChHHEEEEcCch
Confidence 0000000 0000111112223333322335699999999
Q ss_pred cChHHhhhcCccccccCcc---c----cch--hccCcEEecchhhhHHHH
Q 001888 679 NDVGMLQEADIGVGISGVE---G----MQA--VMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~~g~e---~----~~a--k~~aD~vl~~f~~l~~ll 719 (1000)
||+.|.+.||+++++.+.. + ... +..+|+++.++..+..+|
T Consensus 201 ~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 201 YDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp HHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred HhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 9999999999999775410 1 112 567999999998888774
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00042 Score=73.66 Aligned_cols=43 Identities=9% Similarity=0.076 Sum_probs=35.3
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcC---CchhhHHHHHHHcCccc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTG---DKMETAINIGYACSLLR 560 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTG---D~~~ta~~ia~~~gl~~ 560 (1000)
+.+-++++++|++++++|++++++|| +...........+|+..
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 44556899999999999999999998 66667777778888753
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0011 Score=69.64 Aligned_cols=39 Identities=21% Similarity=0.187 Sum_probs=33.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
++.+++.+.++.|+ .|+++.++|+.....+......+|+
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l 150 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGL 150 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSG
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCc
Confidence 56899999999999 9999999999887777776666665
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0002 Score=73.83 Aligned_cols=52 Identities=12% Similarity=0.256 Sum_probs=39.4
Q ss_pred CCEEEEEcCCccChHHhhhcCcc-ccccCccc------cchhcc-CcEEecchhhhHHHH
Q 001888 668 GKTTLAIGDGANDVGMLQEADIG-VGISGVEG------MQAVMS-SDYAIAQFRFLERLL 719 (1000)
Q Consensus 668 ~~~vlaiGDG~ND~~mlk~AdvG-Ia~~g~e~------~~ak~~-aD~vl~~f~~l~~ll 719 (1000)
...+++|||+.||+.|.+.||++ |++.+... ...+.. ||+++.++..+..+|
T Consensus 160 ~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 219 (229)
T 2fdr_A 160 PDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 219 (229)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred hhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHHH
Confidence 35699999999999999999998 56644332 124455 999999888876653
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00069 Score=71.99 Aligned_cols=44 Identities=14% Similarity=0.031 Sum_probs=36.0
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcC---CchhhHHHHHHHcCccc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTG---DKMETAINIGYACSLLR 560 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTG---D~~~ta~~ia~~~gl~~ 560 (1000)
.+.+-++++++|++++++|++++++|| +...........+|+..
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~ 68 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEV 68 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCC
Confidence 455667899999999999999999999 66666667777788753
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00065 Score=67.66 Aligned_cols=38 Identities=16% Similarity=0.326 Sum_probs=31.5
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
+.+++.+.++.|++.|++++++|+... .+......+|+
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~ 120 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSI 120 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCC
Confidence 679999999999999999999999764 45566666665
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0027 Score=63.54 Aligned_cols=41 Identities=22% Similarity=0.310 Sum_probs=36.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCch---hhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKM---ETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~---~ta~~ia~~~gl~ 559 (1000)
++.+++.++++.|+++|+++.++|+... ..+..+...+|+.
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 6889999999999999999999998876 7788888888874
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00056 Score=68.44 Aligned_cols=41 Identities=22% Similarity=0.280 Sum_probs=37.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCc-hhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDK-METAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~-~~ta~~ia~~~gl~ 559 (1000)
++.|++.++|+.|+++|++++++||.. ...+..+.+.+|+.
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 578999999999999999999999998 68888888888874
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00078 Score=69.25 Aligned_cols=29 Identities=28% Similarity=0.235 Sum_probs=27.0
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCch
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKM 546 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~ 546 (1000)
.++.+++.++|+.|+++|+++.++||...
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~ 83 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSG 83 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHH
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCC
Confidence 46789999999999999999999999987
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.024 Score=59.63 Aligned_cols=40 Identities=15% Similarity=0.111 Sum_probs=35.5
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEc---CCchhhHHHHHHHcCcc
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLT---GDKMETAINIGYACSLL 559 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlT---GD~~~ta~~ia~~~gl~ 559 (1000)
+-+++.++++.+++.|++++++| |+...........+|+-
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 66889999999999999999999 99988888888888774
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0037 Score=66.23 Aligned_cols=42 Identities=14% Similarity=0.206 Sum_probs=36.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEc---CCchhhHHHHHHHcCcccc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLT---GDKMETAINIGYACSLLRQ 561 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlT---GD~~~ta~~ia~~~gl~~~ 561 (1000)
.+ ++++++|++++++|++++++| |+...........+|+...
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 45 899999999999999999999 8888888888888888543
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0023 Score=65.74 Aligned_cols=60 Identities=20% Similarity=0.181 Sum_probs=42.2
Q ss_pred HHHHHhcCCCEEEEEcCCc-cChHHhhhcCcccccc--CccccchhccCcEEecchhhhHHHH
Q 001888 660 VTRLVKGTGKTTLAIGDGA-NDVGMLQEADIGVGIS--GVEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 660 iV~~l~~~~~~vlaiGDG~-ND~~mlk~AdvGIa~~--g~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
+.+.+.-....+++|||+. ||+.|.+.||+++.+- +.........+|+++.++..+..+|
T Consensus 164 ~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 164 ALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp HHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred HHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 3333333335699999998 9999999999987552 1111112567899999999888774
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.012 Score=62.43 Aligned_cols=49 Identities=14% Similarity=0.087 Sum_probs=41.0
Q ss_pred cceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEc---CCchhhHHHHHHHcCcc
Q 001888 507 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLT---GDKMETAINIGYACSLL 559 (1000)
Q Consensus 507 ~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlT---GD~~~ta~~ia~~~gl~ 559 (1000)
|.|++- ..++-+++.++|++++++|++++++| |+.........+.+|+.
T Consensus 25 DGTLl~----~~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 25 DGTFYL----DDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp BTTTEE----TTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred cCcEEe----CCEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 555553 25677999999999999999999999 88888888888888874
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0064 Score=63.03 Aligned_cols=41 Identities=15% Similarity=0.138 Sum_probs=31.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEc---CCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLT---GDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlT---GD~~~ta~~ia~~~gl~ 559 (1000)
+.-+.+.++++.+++.|++++++| |+............|+.
T Consensus 19 ~~~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~ 62 (250)
T 2c4n_A 19 VAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred EeCcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 333455889999999999999999 88877777666667763
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0053 Score=64.87 Aligned_cols=124 Identities=17% Similarity=0.137 Sum_probs=79.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.|++.++++.|++ |+++.++|+.....+..+...+|+...-..+
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i--------------------------------- 166 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAI--------------------------------- 166 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEE---------------------------------
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheE---------------------------------
Confidence 577999999999998 6999999999988888888888874321111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCC-
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG- 677 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG- 677 (1000)
+.+... -...-.|+--..+.+.+.-....+++|||+
T Consensus 167 ---------------------~~~~~~----------------------~~~KP~p~~~~~~~~~~~~~~~~~~~vGDs~ 203 (260)
T 2gfh_A 167 ---------------------VIGGEQ----------------------KEEKPAPSIFYHCCDLLGVQPGDCVMVGDTL 203 (260)
T ss_dssp ---------------------EEGGGS----------------------SSCTTCHHHHHHHHHHHTCCGGGEEEEESCT
T ss_pred ---------------------EecCCC----------------------CCCCCCHHHHHHHHHHcCCChhhEEEECCCc
Confidence 110000 000111222223333333233569999995
Q ss_pred ccChHHhhhcCc--cccccCccc--cchhccCcEEecchhhhHHHH
Q 001888 678 ANDVGMLQEADI--GVGISGVEG--MQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 678 ~ND~~mlk~Adv--GIa~~g~e~--~~ak~~aD~vl~~f~~l~~ll 719 (1000)
.||+.+-+.||+ .|++.+... ......+|+++.++..+..++
T Consensus 204 ~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~l 249 (260)
T 2gfh_A 204 ETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALL 249 (260)
T ss_dssp TTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHH
T ss_pred hhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHHHHHH
Confidence 999999999999 566643211 113356899999988877663
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0015 Score=65.70 Aligned_cols=40 Identities=13% Similarity=0.012 Sum_probs=35.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+++.+.++.|++.| +++++|+.....+..+...+|+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 36799999999999999 99999999988888888777764
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0065 Score=61.78 Aligned_cols=42 Identities=21% Similarity=0.188 Sum_probs=38.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 560 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 560 (1000)
++.|++.++++.|++.|+++.++|+.....+....+.+|+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~ 125 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc
Confidence 467999999999999999999999999999999988888753
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0011 Score=67.31 Aligned_cols=36 Identities=11% Similarity=0.083 Sum_probs=30.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA 555 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~ 555 (1000)
++.+++.++++.|++ |++++++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 467899999999999 999999999887766666554
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.00091 Score=62.63 Aligned_cols=41 Identities=12% Similarity=0.046 Sum_probs=34.9
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
.++.|++.++++.|+++|+++.++|+.....+..+.+.+|+
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l 57 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELET 57 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCCh
Confidence 35778999999999999999999999988877777666665
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0094 Score=59.95 Aligned_cols=34 Identities=12% Similarity=0.184 Sum_probs=29.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINI 552 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~i 552 (1000)
++.+++.++++.|+++|+++.++||.....+..+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~ 69 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPL 69 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHh
Confidence 5789999999999999999999999887766443
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=95.93 E-value=0.0086 Score=62.74 Aligned_cols=118 Identities=14% Similarity=0.218 Sum_probs=76.9
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHH
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 596 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1000)
..++.|++.+.++.|++.|+++.+.|+.. .+..+.+.+|+...-..
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~-------------------------------- 159 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDF-------------------------------- 159 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSE--------------------------------
T ss_pred ccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccce--------------------------------
Confidence 34678999999999999999999887764 45566677777432111
Q ss_pred HHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcC
Q 001888 597 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGD 676 (1000)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGD 676 (1000)
++.+... -.....|+-=..+.+.+.-....+++|||
T Consensus 160 ----------------------i~~~~~~----------------------~~~KP~p~~~~~a~~~lg~~p~e~l~VGD 195 (250)
T 4gib_A 160 ----------------------IADAGKC----------------------KNNKPHPEIFLMSAKGLNVNPQNCIGIED 195 (250)
T ss_dssp ----------------------ECCGGGC----------------------CSCTTSSHHHHHHHHHHTCCGGGEEEEES
T ss_pred ----------------------eeccccc----------------------CCCCCcHHHHHHHHHHhCCChHHeEEECC
Confidence 1111100 00122233333444444333456999999
Q ss_pred CccChHHhhhcCc-cccccCccccchhccCcEEecchhhh
Q 001888 677 GANDVGMLQEADI-GVGISGVEGMQAVMSSDYAIAQFRFL 715 (1000)
Q Consensus 677 G~ND~~mlk~Adv-GIa~~g~e~~~ak~~aD~vl~~f~~l 715 (1000)
+.+|+.+-+.||+ .|++.+.+. ...||+++.++..|
T Consensus 196 s~~Di~aA~~aG~~~i~v~~~~~---~~~ad~vi~~l~eL 232 (250)
T 4gib_A 196 ASAGIDAINSANMFSVGVGNYEN---LKKANLVVDSTNQL 232 (250)
T ss_dssp SHHHHHHHHHTTCEEEEESCTTT---TTTSSEEESSGGGC
T ss_pred CHHHHHHHHHcCCEEEEECChhH---hccCCEEECChHhC
Confidence 9999999999998 457655443 34689999988776
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=95.91 E-value=0.067 Score=52.85 Aligned_cols=53 Identities=17% Similarity=0.194 Sum_probs=36.0
Q ss_pred EEEccchhHhHHHHhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHh
Q 001888 424 LLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEK 503 (1000)
Q Consensus 424 l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 503 (1000)
-+.-|..+.|.+.-- ...+.....+.++..+|..++.+|
T Consensus 133 ~v~iGn~~~m~~~gi----~i~~~~~~~~~~~~~~G~T~V~va------------------------------------- 171 (185)
T 2kmv_A 133 KVLIGNREWMIRNGL----VINNDVNDFMTEHERKGRTAVLVA------------------------------------- 171 (185)
T ss_dssp EEEEECHHHHHHHTC----CCCHHHHHHHHHHHHTTCEEEEEE-------------------------------------
T ss_pred EEEECCHHHHHHcCC----CCCHHHHHHHHHHHhCCCeEEEEE-------------------------------------
Confidence 344588876643211 112234455677888999999999
Q ss_pred hhccceeeEEeeeccc
Q 001888 504 IERDLILLGATAVEDK 519 (1000)
Q Consensus 504 iE~~l~~lG~i~i~D~ 519 (1000)
.|-.++|++++.|+
T Consensus 172 --idg~l~g~iavaD~ 185 (185)
T 2kmv_A 172 --VDDELCGLIAIADT 185 (185)
T ss_dssp --ETTEEEEEEEEECC
T ss_pred --ECCEEEEEEEEEcC
Confidence 36789999999985
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.77 E-value=0.014 Score=60.81 Aligned_cols=43 Identities=7% Similarity=0.101 Sum_probs=35.8
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchh----hHHHHHHHcCcc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKME----TAINIGYACSLL 559 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~----ta~~ia~~~gl~ 559 (1000)
+.++.|++.+.++.|+++|+++.++||++.. .+..-.+.+|+.
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT 145 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcC
Confidence 4688999999999999999999999999764 555556667774
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=95.65 E-value=0.016 Score=64.56 Aligned_cols=42 Identities=19% Similarity=0.173 Sum_probs=37.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 560 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 560 (1000)
++.||+.++++.|+++|+++.++|+.....+..+....|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 577899999999999999999999999988888888888753
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=95.64 E-value=0.0011 Score=66.89 Aligned_cols=30 Identities=27% Similarity=0.308 Sum_probs=26.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhh
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMET 548 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~t 548 (1000)
++.+++.++++.|++.|++++++|+.....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~ 120 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 120 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHH
Confidence 567999999999999999999999976543
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.55 E-value=0.013 Score=61.07 Aligned_cols=43 Identities=16% Similarity=0.087 Sum_probs=35.5
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchh----hHHHHHHHcCcc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKME----TAINIGYACSLL 559 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~----ta~~ia~~~gl~ 559 (1000)
+.++.|++.+.++.|+++|+++.++||+... .+..-.+.+|+.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 5688999999999999999999999999764 455555667774
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.25 E-value=0.023 Score=58.01 Aligned_cols=40 Identities=15% Similarity=0.114 Sum_probs=34.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+++.++++.|+++|+++.++|+... .+..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcH
Confidence 5789999999999999999999999866 466777777763
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=95.03 E-value=0.0088 Score=61.52 Aligned_cols=35 Identities=11% Similarity=0.006 Sum_probs=29.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGY 554 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~ 554 (1000)
++.|++.++++.|++. +++.++|+.....+..+..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~ 146 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCK 146 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHh
Confidence 3568999999999999 9999999998887776653
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=94.92 E-value=0.2 Score=52.08 Aligned_cols=62 Identities=13% Similarity=0.084 Sum_probs=40.9
Q ss_pred HHHHHHH-hcCC---CEEEEEcCCc-cChHHhhhcCccc-ccc-Ccc-ccch---hccCcEEecchhhhHHHH
Q 001888 658 ALVTRLV-KGTG---KTTLAIGDGA-NDVGMLQEADIGV-GIS-GVE-GMQA---VMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 658 ~~iV~~l-~~~~---~~vlaiGDG~-ND~~mlk~AdvGI-a~~-g~e-~~~a---k~~aD~vl~~f~~l~~ll 719 (1000)
..+.+.+ +..| ..+++|||+. ||+.|.+.||+.. .+. |.. ..+. ...+|+++.++..+..++
T Consensus 182 ~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~l 254 (259)
T 2ho4_A 182 KTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHI 254 (259)
T ss_dssp HHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHHH
Confidence 3444444 4444 5699999998 9999999999754 332 211 1111 345899999888877663
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=94.87 E-value=0.1 Score=56.24 Aligned_cols=43 Identities=16% Similarity=0.159 Sum_probs=35.3
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEc---CCchhhHHHHHHHcCcc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLT---GDKMETAINIGYACSLL 559 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlT---GD~~~ta~~ia~~~gl~ 559 (1000)
.+++-+++.++++.|+++|++++++| |+.........+.+|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 46677899999999999999999999 57666666666777774
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=94.82 E-value=0.022 Score=61.42 Aligned_cols=32 Identities=25% Similarity=0.270 Sum_probs=28.5
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhh
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMET 548 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~t 548 (1000)
++++.+++.++++.|+++|+++.++||.....
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 46678999999999999999999999998653
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=94.72 E-value=0.013 Score=57.69 Aligned_cols=41 Identities=22% Similarity=0.244 Sum_probs=33.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCC---------------chhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGD---------------KMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD---------------~~~ta~~ia~~~gl~ 559 (1000)
++.|++.++|+.|+++|++++++|+. ....+..+....|+.
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 97 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ 97 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC
Confidence 57899999999999999999999997 445566666777763
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=94.56 E-value=0.059 Score=55.36 Aligned_cols=40 Identities=13% Similarity=0.153 Sum_probs=35.6
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
-++.|++.++++.|+++| ++.++|+.....+..+...+|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 368899999999999999 9999999988888888877776
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=94.48 E-value=0.042 Score=57.73 Aligned_cols=43 Identities=12% Similarity=0.170 Sum_probs=33.7
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhh---HHHHHHHcCcc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMET---AINIGYACSLL 559 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~t---a~~ia~~~gl~ 559 (1000)
+.++-|++.++|+.|+++|+++.++||+.... +......+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 35788999999999999999999999998543 33344556664
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=94.30 E-value=0.027 Score=50.73 Aligned_cols=46 Identities=15% Similarity=0.137 Sum_probs=37.5
Q ss_pred EEEEEEEC-----CccccC--CCCCeEEeceeecCCCeEEEEEEEecchhhHhh
Q 001888 46 FVGTLQYE-----GKQYPL--SPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ 92 (1000)
Q Consensus 46 F~G~~~~~-----~~~~~l--~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki~~ 92 (1000)
.+|...+| ||+.|+ ..++.+|+||.+.+ |.+.+.|++||.+|.+.+
T Consensus 51 ~~g~~~vdeS~LTGEs~pv~k~~g~~v~aGt~~~~-G~~~~~V~~~g~~T~~~~ 103 (113)
T 2hc8_A 51 VEGESYVDESMISGEPVPVLKSKGDEVFGATINNT-GVLKIRATRVGGETLLAQ 103 (113)
T ss_dssp EECCEEEECHHHHCCSSCEEECTTCEECTTCEECS-SCEEEEEEECGGGSHHHH
T ss_pred EEceEEEEccccCCCCccEEECCCCEEEeCCEEee-ceEEEEEEEecCcCHHHH
Confidence 34555554 888887 45699999999996 999999999999997643
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=93.86 E-value=0.032 Score=60.69 Aligned_cols=41 Identities=22% Similarity=0.296 Sum_probs=37.2
Q ss_pred ecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHc
Q 001888 516 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 556 (1000)
Q Consensus 516 i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 556 (1000)
....+.++..+.++.|+++|++||++||-....+..+|..+
T Consensus 140 ~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 140 EPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp CCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred cccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 34467889999999999999999999999999999999875
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=93.43 E-value=0.11 Score=54.67 Aligned_cols=39 Identities=18% Similarity=0.248 Sum_probs=33.2
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 556 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 556 (1000)
-++.|++.++++.|+++|+++.++|+.....+..+-..+
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~ 167 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS 167 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTB
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhh
Confidence 368899999999999999999999999887776665543
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.12 E-value=0.03 Score=51.36 Aligned_cols=38 Identities=21% Similarity=0.348 Sum_probs=33.2
Q ss_pred CCccccCC--CCCeEEeceeecCCCeEEEEEEEecchhhHh
Q 001888 53 EGKQYPLS--PQQILLRDSKLKNTDYVYGVVVFTGHDTKVM 91 (1000)
Q Consensus 53 ~~~~~~l~--~~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki~ 91 (1000)
+||+.|+. .++.+|+||.+.+ |.+.+.|++||.+|.+.
T Consensus 75 TGEs~pv~k~~g~~v~aGt~~~~-G~~~~~v~~~g~~T~~~ 114 (124)
T 2kij_A 75 TGEAMPVAKKPGSTVIAGSINQN-GSLLICATHVGADTTLS 114 (124)
T ss_dssp TCCSSCEECCTTEEECTTCEEES-SCCEEEECSCTTTCHHH
T ss_pred cCCCccEEeCCCCEEEcCCEEee-eEEEEEEEEecccCHHH
Confidence 58888874 4699999999996 99999999999999663
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=92.28 E-value=0.28 Score=51.28 Aligned_cols=42 Identities=5% Similarity=0.142 Sum_probs=34.2
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHH----cCcc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA----CSLL 559 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~----~gl~ 559 (1000)
++.-+++.++++.+++.|+++.++||+...+...++.. +|+.
T Consensus 20 ~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 20 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 34446888999999999999999999998877777665 7764
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=91.85 E-value=0.58 Score=48.91 Aligned_cols=43 Identities=23% Similarity=0.215 Sum_probs=35.2
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHH---cCcc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA---CSLL 559 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~---~gl~ 559 (1000)
.+.+-+++.++|+.++++|++++++||+...+...++.. +|+.
T Consensus 15 ~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~ 60 (263)
T 1zjj_A 15 GNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGID 60 (263)
T ss_dssp TTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCC
T ss_pred CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 344448999999999999999999999998887777665 4653
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=90.88 E-value=0.2 Score=51.76 Aligned_cols=41 Identities=20% Similarity=0.111 Sum_probs=32.6
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 560 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 560 (1000)
.++.|++.+.++.|++.|+++.++|+... +..+-..+|+..
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~ 134 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELRE 134 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGG
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcc
Confidence 46789999999999999999999998653 445566677643
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=90.70 E-value=0.12 Score=52.47 Aligned_cols=29 Identities=17% Similarity=0.236 Sum_probs=25.5
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCchhh
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDKMET 548 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~~~t 548 (1000)
+.+++.++++.|+++|+++.++||.....
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~ 117 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTK 117 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCS
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHH
Confidence 46789999999999999999999997543
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=89.86 E-value=0.29 Score=45.82 Aligned_cols=40 Identities=18% Similarity=0.062 Sum_probs=33.7
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCc---hhhHHHHHHHcCcc
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDK---METAINIGYACSLL 559 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~---~~ta~~ia~~~gl~ 559 (1000)
+.+++.++|++|+++|++++++|||+ ...+.....+.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 45789999999999999999999998 55667777777773
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=87.98 E-value=4.1 Score=39.07 Aligned_cols=16 Identities=25% Similarity=0.221 Sum_probs=14.3
Q ss_pred eCChhHHHHHHHHHHc
Q 001888 352 AESPDEAAFVIAAREV 367 (1000)
Q Consensus 352 ~~sp~e~al~~~a~~~ 367 (1000)
+.||...||+++|++.
T Consensus 36 SeHPlA~AIv~~a~~~ 51 (165)
T 2arf_A 36 SEHPLGVAVTKYCKEE 51 (165)
T ss_dssp SCSTTHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHh
Confidence 6899999999999765
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=86.74 E-value=0.22 Score=53.34 Aligned_cols=35 Identities=23% Similarity=0.252 Sum_probs=27.5
Q ss_pred cCCCcceeccccccccc---------cceeEEEEcCCCcccccee
Q 001888 210 DTDKPARARTSNLNEEL---------GQVDTILSDKTGTLTCNSM 245 (1000)
Q Consensus 210 ~~~~~~~v~~~~~~E~L---------g~v~~I~sDKTGTLT~n~m 245 (1000)
-.+.++++|+++.+|++ .++. |+||||||||+...
T Consensus 16 l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~ 59 (297)
T 4fe3_A 16 FQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSY 59 (297)
T ss_dssp GTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEE
T ss_pred HhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeecc
Confidence 37789999999999873 3444 67799999998654
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=81.26 E-value=1.1 Score=52.08 Aligned_cols=26 Identities=19% Similarity=0.280 Sum_probs=24.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCC
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGD 544 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD 544 (1000)
++.+++.++++.|+++|+++.++|+.
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~ 125 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNT 125 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCC
Confidence 67899999999999999999999996
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=80.61 E-value=1.5 Score=49.37 Aligned_cols=26 Identities=27% Similarity=0.474 Sum_probs=24.5
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCc
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDK 545 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~ 545 (1000)
+-+++.++|+.|+++|+++.++|+..
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQM 113 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCc
Confidence 67999999999999999999999965
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1000 | ||||
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 6e-31 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 2e-20 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 2e-15 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 1e-08 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 3e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 2e-06 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 4e-06 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 5e-05 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 2e-04 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 4e-04 | |
| d1u19a_ | 348 | f.13.1.2 (A:) Rhodopsin {Cow (Bos taurus) [TaxId: | 9e-04 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 0.001 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 0.001 |
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 119 bits (300), Expect = 6e-31
Identities = 41/258 (15%), Positives = 80/258 (31%), Gaps = 39/258 (15%)
Query: 274 ERTFEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAI 333
+ F +D D LN + + E + N + + D + + + A+
Sbjct: 4 CKMFIIDKVDGDFCSLNEFSITG----STYAPEGEVLKNDKPIRSGQFDGLVELATICAL 59
Query: 334 CHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVN 393
C+ + D NE G E A ++ + ++S E +
Sbjct: 60 CNDSSLDFNETKGVYEK-VGEATETALTTLVEKMNVFN--TEVRNLSKVERANACNSVIR 116
Query: 394 RVYELLHVLEFTSSRKRMSVMVRNPENQ-----LLLLCKGADSVMFERLSKHG------- 441
++ + LEF+ RK MSV ++ + KGA + +R +
Sbjct: 117 QLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVP 176
Query: 442 --QQFEAETRRHINRYAEA--GLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALV 497
+ + I + LR L +A R+ + +
Sbjct: 177 MTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDD---------------- 220
Query: 498 ASAAEKIERDLILLGATA 515
+S + E DL +G
Sbjct: 221 SSRFMEYETDLTFVGVVG 238
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 88.4 bits (218), Expect = 2e-20
Identities = 29/214 (13%), Positives = 59/214 (27%), Gaps = 46/214 (21%)
Query: 318 EPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAE--SPDEAAFVIAAREVGFQFFGSS 375
+ S R+ +C+ A+ +E +S E+A +
Sbjct: 28 DKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSV---- 83
Query: 376 QTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPEN--QLLLLCKGADSVM 433
+K+ + + F S+ K + +N +L+ KGA +
Sbjct: 84 --------------RKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERI 129
Query: 434 FERLS---------KHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLK 484
+R S ++ + + G R L L ++ K
Sbjct: 130 LDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKF--- 186
Query: 485 AKTSVTSDREALVASAAEKIERDLILLGATAVED 518
D + L L +G ++ D
Sbjct: 187 -------DTDEL-----NFPTEKLCFVGLMSMID 208
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 77.2 bits (189), Expect = 2e-15
Identities = 36/349 (10%), Positives = 79/349 (22%), Gaps = 86/349 (24%)
Query: 379 ISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLS 438
+ E + Q ++ L + + + N L + A + + +
Sbjct: 105 MYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHVSDA 164
Query: 439 KHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVA 498
+ + A+ + + + + E +I F + +
Sbjct: 165 T-----LFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTF----------KTGYIY 209
Query: 499 SAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558
D V ++ L AG ++ + TG +
Sbjct: 210 QEIILRPVD---------------EVKVLLNDLKGAGFELGIATGRPYTETVVP------ 248
Query: 559 LRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGL 618
E L E + V + K
Sbjct: 249 ----------------FENLGLLPYFEADFIATASDVLEAENMYPQARPLGKP------- 285
Query: 619 VIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678
+ A++ + + + +GD
Sbjct: 286 --------------------NPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSL 325
Query: 679 NDVGMLQEAD---IGV--GISGVEGMQAVMSS--DYAIAQFRFLERLLL 720
D+ Q+ IG G+ G + + + DY I L +L
Sbjct: 326 ADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLD 374
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 53.6 bits (128), Expect = 1e-08
Identities = 37/208 (17%), Positives = 61/208 (29%), Gaps = 57/208 (27%)
Query: 507 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQI 566
D T D +K V I AGI+V ++TGD TAI I +
Sbjct: 8 DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIF------- 60
Query: 567 VITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLD 626
E++ G+ D
Sbjct: 61 -------------------------------------------GENEEVADRAYTGREFD 77
Query: 627 FALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQE 686
+ + + R P K+ + ++ + T GDG ND L++
Sbjct: 78 DLPLAEQREAC------RRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKK 131
Query: 687 ADIGVGISGVEGMQAVMSSDYAIAQFRF 714
A+IG+ + A +S+ +A F
Sbjct: 132 AEIGIAMGSGT-AVAKTASEMVLADDNF 158
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 51.6 bits (123), Expect = 3e-07
Identities = 42/291 (14%), Positives = 84/291 (28%), Gaps = 35/291 (12%)
Query: 689 IGVGISGV-EGMQAVMSSDYAIAQFRFLERLLLVH--------GHWCYRRISMMICYFFY 739
+ + ++ + EG+ AV+++ A+ R ++ +V G Y + I Y
Sbjct: 185 VALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLIS 244
Query: 740 KNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGV-------------- 785
N+ +F A A + N+ LP ALG
Sbjct: 245 SNVGEVVCIFLTAA---LGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRS 301
Query: 786 -FDQDVSARLCLKYPL--LYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQA 842
+ +S L +Y Y +W + GV + F
Sbjct: 302 PKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHF 361
Query: 843 FRKDGHAVDYEVLGVAMYSSVVWAVNCQMALSINYFTWIQHFF---IWGSIALWYIFLVV 899
D + S +V +M ++N + Q W +I L +
Sbjct: 362 EGLDCEIFEAPEPMTMALSVLVT---IEMCNALNSLSENQSLMRMPPWVNIWLLGSICLS 418
Query: 900 YGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRF 950
++ + A + WL L + + + + + +
Sbjct: 419 MSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNY 469
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 47.3 bits (111), Expect = 2e-06
Identities = 23/181 (12%), Positives = 54/181 (29%), Gaps = 12/181 (6%)
Query: 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDME 576
+ + E I + GI + ++TG+ ++ A + + +
Sbjct: 17 NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76
Query: 577 ALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKM 636
D+E I + R + + GLVI ++++ +++
Sbjct: 77 IFLASMDEEWILWNEIRKRFPNARTSYTMPDR------RAGLVIMRETINVETVREIINE 130
Query: 637 FLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTL------AIGDGANDVGMLQEADIG 690
+ S + + K + + +GDG ND+ +
Sbjct: 131 LNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK 190
Query: 691 V 691
V
Sbjct: 191 V 191
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.8 bits (110), Expect = 4e-06
Identities = 20/96 (20%), Positives = 32/96 (33%), Gaps = 2/96 (2%)
Query: 622 GKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTG-KTTLAIGDGAND 680
+L+ F S + ++ L + K + IGDGA D
Sbjct: 120 NIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATD 179
Query: 681 VGMLQEADIGVGISGVEGMQAVM-SSDYAIAQFRFL 715
+ AD +G G Q V ++ + I F L
Sbjct: 180 MEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 42.0 bits (98), Expect = 5e-05
Identities = 13/50 (26%), Positives = 21/50 (42%)
Query: 507 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 556
D D L++ + +L + GIKV ++TGD +A I
Sbjct: 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL 58
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 42.0 bits (97), Expect = 2e-04
Identities = 18/208 (8%), Positives = 55/208 (26%), Gaps = 30/208 (14%)
Query: 514 TAVEDKLQKGVPECIDKLAQAGIKVWVLTG-----------DKMETAINIGYACSLLRQE 562
T + I++L G ++ + + I S +
Sbjct: 12 TLIPGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIP 71
Query: 563 MKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDG 622
+ ++ + K+ E + G+ ++ + ++ +
Sbjct: 72 KGYFPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPP 131
Query: 623 KSLDFALDKKLEKMFLDL---------------AIDCASVICCRSSPKQKALVTRLVKGT 667
+ + A++++ + + + + + L+
Sbjct: 132 ELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRFYTVHGNSDKGKAAKILLDFY 191
Query: 668 GKT----TLAIGDGANDVGMLQEADIGV 691
+ + A+GD ND M + D
Sbjct: 192 KRLGQIESYAVGDSYNDFPMFEVVDKVF 219
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 40.6 bits (94), Expect = 4e-04
Identities = 31/171 (18%), Positives = 46/171 (26%), Gaps = 15/171 (8%)
Query: 524 VPECIDKLAQ-AGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQG 582
VPE A+ GI T + Y MKQ + LD ++ + Q
Sbjct: 14 VPEIWIAFAEKTGIDALKATTRDI-----PDYDVL-----MKQRLRILDEHGLKLGDIQE 63
Query: 583 DKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI 642
+ + + + + TF L L++
Sbjct: 64 VIATLK---PLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLL-CHKLEIDD 119
Query: 643 DCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGI 693
V K K +A GD ND ML EA G+
Sbjct: 120 SDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF 170
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 39.3 bits (90), Expect = 0.001
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 671 TLAIGDGANDVGMLQEADIGVGISG 695
TL +GDG ND +L+ D V + G
Sbjct: 206 TLGLGDGPNDAPLLEVMDYAVIVKG 230
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 39.2 bits (90), Expect = 0.001
Identities = 30/180 (16%), Positives = 63/180 (35%), Gaps = 12/180 (6%)
Query: 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL---LRQEMKQIVITLDSP 573
+ + E I + G+ V +L+G+ + + + + E I+ D
Sbjct: 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGS 77
Query: 574 DMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKL 633
+ +G + LE ++K R + + + + + + G ID + +D+ +
Sbjct: 78 IKKFFSNEGTNK-----FLEEMSK--RTSMRSILTNRWREASTGFDIDPEDVDYVRKEAE 130
Query: 634 EKMFLDLAIDCASVICCRSSPKQKALVTRLVKG--TGKTTLAIGDGANDVGMLQEADIGV 691
+ F+ + + R K A+ L IGD ND+ M Q
Sbjct: 131 SRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKA 190
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1000 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.93 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.92 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.88 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.88 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.86 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.56 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.95 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.95 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.88 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.84 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.81 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.8 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.71 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.7 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.67 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.66 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.65 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.63 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.56 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.42 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.36 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.32 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 98.21 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.21 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.14 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.72 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.49 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 97.4 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.34 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.09 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.79 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.78 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.7 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 96.46 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 96.4 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.35 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.19 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.15 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.09 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 95.82 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 95.77 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 95.41 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.34 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.1 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 94.64 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 94.53 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 94.44 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 94.37 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 94.19 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 94.05 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 93.33 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 92.4 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 91.26 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 88.99 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 86.1 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 85.0 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 80.61 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.93 E-value=1.4e-26 Score=226.13 Aligned_cols=148 Identities=24% Similarity=0.319 Sum_probs=119.4
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
||+|++++++|+.|+++||++||+|||+..||.++|+++|+..++..+.
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~------------------------------- 67 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA------------------------------- 67 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCT-------------------------------
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccc-------------------------------
Confidence 9999999999999999999999999999999999999999987653210
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCC
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 677 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG 677 (1000)
...++|.+++.....+..+... +..+|+|++|+||..+|+.+++.|++|+|+|||
T Consensus 68 -------------------~~~~~~~~~~~~~~~~~~~~~~------~~~v~ar~~p~~K~~lv~~l~~~g~~Va~vGDG 122 (168)
T d1wpga2 68 -------------------DRAYTGREFDDLPLAEQREACR------RACCFARVEPSHKSKIVEYLQSYDEITAMTGDG 122 (168)
T ss_dssp -------------------TTEEEHHHHHHSCHHHHHHHHH------HCCEEESCCHHHHHHHHHHHHHTTCCEEEEECS
T ss_pred -------------------cccccccccchhhHHHHhhhhh------hhhhhhccchhHHHHHHHHHHhcccceeEEecC
Confidence 0033444444333333333332 234999999999999999999999999999999
Q ss_pred ccChHHhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhh
Q 001888 678 ANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHG 723 (1000)
Q Consensus 678 ~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~g 723 (1000)
.||++||+.|||||++++. ...|+++||+++.+ |..+.++ +.+|
T Consensus 123 ~nD~~AL~~AdvGIa~~~g-t~~a~~aAdivl~~~~l~~v~~~-I~~G 168 (168)
T d1wpga2 123 VNDAPALKKAEIGIAMGSG-TAVAKTASEMVLADDNFSTIVAA-VEEG 168 (168)
T ss_dssp GGGHHHHHHSSEEEEETTS-CHHHHHTCSEEETTCCTHHHHHH-HHHH
T ss_pred CCCHHHHHhCCEEEEeccc-cHHHHHhCCEEEccCCHHHHHHH-HHcC
Confidence 9999999999999999533 23388999999998 7778877 6766
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.92 E-value=3.7e-26 Score=234.70 Aligned_cols=171 Identities=15% Similarity=0.143 Sum_probs=125.3
Q ss_pred ChHHHHHHHHHHhhhcceeeccCCCCCc--eEEeeCChhHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEE
Q 001888 320 HSDVIQKFFRVLAICHTAIPDVNEETGE--ISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYE 397 (1000)
Q Consensus 320 ~~~~~~~~~~~l~lC~~~~~~~~~~~~~--~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 397 (1000)
.++.++.++.++++||++....+..... .....|+|+|.||+.+|.+.|..... .+..|+
T Consensus 30 ~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~~~~~------------------~r~~~~ 91 (214)
T d1q3ia_ 30 RSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRK------------------MRDRNP 91 (214)
T ss_dssp CSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHSCHHH------------------HHHTSC
T ss_pred CCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCCCHHH------------------HHhhCc
Confidence 3456788999999999997754432111 01125899999999999988765322 256788
Q ss_pred EEEeeCCCCCCceEEEEEEcC--CCcEEEEEccchhHhHHHHhcc---------ChhhHHHHHHHHHHHHHccceEEEEE
Q 001888 398 LLHVLEFTSSRKRMSVMVRNP--ENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIA 466 (1000)
Q Consensus 398 il~~~~F~s~rkrmsviv~~~--~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~G~r~l~~a 466 (1000)
++.++||+|+||||+++++.+ ++.+++|+|||||.|+++|+.. +++.++.+.+.+++|+.+|+|||++|
T Consensus 92 ~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A 171 (214)
T d1q3ia_ 92 KVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFC 171 (214)
T ss_dssp EEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceeechHHHHHHHHHHHHHHhhCCcEEEEEE
Confidence 999999999999999999975 4578999999999999999852 45678899999999999999999999
Q ss_pred EEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCC
Q 001888 467 YRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKG 523 (1000)
Q Consensus 467 ~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~ 523 (1000)
||.++.+++..|... +.+ ..+.+|+||+|+|++|++||||++
T Consensus 172 ~k~l~~~~~~~~~~~----------~~~-----~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 172 QLNLPSGKFPRGFKF----------DTD-----ELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp EEEECTTTSCTTCCC----------CTT-----TTSSCCSSEEEEEEEEEESCCSCC
T ss_pred EEecCcccccccccc----------Chh-----hhhhhcCCCEEEEEEEEEeCCCCC
Confidence 999988765433210 000 124568999999999999999975
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.88 E-value=3.1e-23 Score=193.74 Aligned_cols=123 Identities=25% Similarity=0.341 Sum_probs=102.8
Q ss_pred cceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHH
Q 001888 507 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 586 (1000)
Q Consensus 507 ~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 586 (1000)
|.+..+.++++|++|++++++|+.|+++||++||+|||+.++|..+|++|||-
T Consensus 9 d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~--------------------------- 61 (135)
T d2b8ea1 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--------------------------- 61 (135)
T ss_dssp ECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS---------------------------
T ss_pred CCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh---------------------------
Confidence 55667789999999999999999999999999999999999999999999982
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhc
Q 001888 587 ITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG 666 (1000)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~ 666 (1000)
.++++++|++|..+++.++.
T Consensus 62 ------------------------------------------------------------~v~~~~~p~~k~~~v~~~q~ 81 (135)
T d2b8ea1 62 ------------------------------------------------------------LVIAEVLPHQKSEEVKKLQA 81 (135)
T ss_dssp ------------------------------------------------------------EEECSCCHHHHHHHHHHHTT
T ss_pred ------------------------------------------------------------hhccccchhHHHHHHHHHHc
Confidence 18899999999999999975
Q ss_pred CCCEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc--hhhhHHH
Q 001888 667 TGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERL 718 (1000)
Q Consensus 667 ~~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~l 718 (1000)
+..|+|+|||.||++||++||+||++.+... .++++||+++.+ |+.+..+
T Consensus 82 -~~~v~~vGDg~nD~~aL~~Advgia~~~~~~-~~~~aADivl~~~~l~~i~~a 133 (135)
T d2b8ea1 82 -KEVVAFVGDGINDAPALAQADLGIAVGSGSD-VAVESGDIVLIRDDLRDVVAA 133 (135)
T ss_dssp -TSCEEEEECSSSSHHHHHHSSEEEEECCC---------SEEESSCCTHHHHHH
T ss_pred -CCEEEEEeCCCCcHHHHHhCCeeeecCccCH-HHHHhCCEEEECCCHHHHHHH
Confidence 4689999999999999999999999965443 389999999987 5555544
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.88 E-value=8.4e-28 Score=269.76 Aligned_cols=335 Identities=13% Similarity=0.051 Sum_probs=216.0
Q ss_pred ccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCCCCccccCCCc
Q 001888 220 SNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVESGKS 299 (1000)
Q Consensus 220 ~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1000)
....|.||..+++|+|||||+|.|.|.++.+. .+ ...... +.
T Consensus 30 l~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~-------~~--~il~~~-k~---------------------------- 71 (380)
T d1qyia_ 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQ-------KD--KILNKL-KS---------------------------- 71 (380)
T ss_dssp HHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHT-------TT--HHHHHH-HH----------------------------
T ss_pred hhchhhcccceeeecCcccchhhhhheeeeec-------ch--hhhHhh-hh----------------------------
Confidence 44568999999999999999999999764321 10 000000 00
Q ss_pred cCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHcCcEEEeecCCee
Q 001888 300 VKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSI 379 (1000)
Q Consensus 300 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~ 379 (1000)
..|++ . -++..+.++||.+..... .++|++.+++..++..+..+..
T Consensus 72 ---~g~n~---------------~-~dl~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~------ 117 (380)
T d1qyia_ 72 ---LGLNS---------------N-WDMLFIVFSIHLIDILKK---------LSHDEIEAFMYQDEPVELKLQN------ 117 (380)
T ss_dssp ---TTCCC---------------H-HHHHHHHHHHHHHHHHTT---------SCHHHHHHHHHCSSCHHHHHTT------
T ss_pred ---cCCCh---------------h-HHHHHHHHHHHHHHHHhh---------cCCCcHHHHHHHHhhccchHHH------
Confidence 00110 0 135566677876643221 3678888888655433222111
Q ss_pred EEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhccChhhHHHHHHHHHHHHHcc
Q 001888 380 SLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAG 459 (1000)
Q Consensus 380 ~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 459 (1000)
....+.....+||++.+|+|+++....++.+..+.||+++.+.. ......++...+..++.+|
T Consensus 118 ------------~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~a~~~ 180 (380)
T d1qyia_ 118 ------------ISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHV-----SDATLFSLKGALWTLAQEV 180 (380)
T ss_dssp ------------SGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTTC-----SCCGGGSTTCHHHHHHHHH
T ss_pred ------------HHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcCC-----cHHHHHHHHhHHHHHHHHH
Confidence 14455566789999999999988765445555666777765521 1123445667788999999
Q ss_pred ceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccC--CcHHHHHHHHHcCCe
Q 001888 460 LRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQK--GVPECIDKLAQAGIK 537 (1000)
Q Consensus 460 ~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~--~v~e~I~~l~~aGIk 537 (1000)
+|++++|++..++.+ .....+....|+++.+++++| +++++++.|+++||+
T Consensus 181 ~r~l~~~~~~~~~~~---------------------------~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~ 233 (380)
T d1qyia_ 181 YQEWYLGSKLYEDVE---------------------------KKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFE 233 (380)
T ss_dssp HHHHHHHHHHHHHHH---------------------------CSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHhhhcccccc---------------------------cccchhhHhcccccccccccchhhHHHHHHHHHHCCCe
Confidence 999999976543321 122345667899999999665 999999999999999
Q ss_pred EEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhhcccccCccceE
Q 001888 538 VWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTFG 617 (1000)
Q Consensus 538 v~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (1000)
++|+|||+..+|..+++++|+...-.......+++.. .. ......... .
T Consensus 234 v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~--------------~~--------~~~~~~~~~-~-------- 282 (380)
T d1qyia_ 234 LGIATGRPYTETVVPFENLGLLPYFEADFIATASDVL--------------EA--------ENMYPQARP-L-------- 282 (380)
T ss_dssp EEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHH--------------HH--------HHHSTTSCC-C--------
T ss_pred EEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhh--------------hh--------hhhcccccc-c--------
Confidence 9999999999999999999996421111111111000 00 000000000 0
Q ss_pred EEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChHHhhhcC---cccccc
Q 001888 618 LVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEAD---IGVGIS 694 (1000)
Q Consensus 618 lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~mlk~Ad---vGIa~~ 694 (1000)
++. ....+. ....++|.+|.+|..+++.++..+..|+|+|||.||++|.|.|| |||+|+
T Consensus 283 ----~KP--------~p~~~~------~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G 344 (380)
T d1qyia_ 283 ----GKP--------NPFSYI------AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTG 344 (380)
T ss_dssp ----CTT--------STHHHH------HHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCB
T ss_pred ----cCC--------ChHHHH------HHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecC
Confidence 000 000111 11256789999999999999889999999999999999999999 899773
Q ss_pred --Cccccc--hhccCcEEecchhhhHHHH
Q 001888 695 --GVEGMQ--AVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 695 --g~e~~~--ak~~aD~vl~~f~~l~~ll 719 (1000)
|.+... ....||+++.++..+.++|
T Consensus 345 ~~g~~~~~el~~~~AD~ii~~~~el~~il 373 (380)
T d1qyia_ 345 LKGKDAAGELEAHHADYVINHLGELRGVL 373 (380)
T ss_dssp TTBGGGHHHHHHTTCSEEESSGGGHHHHH
T ss_pred CCCcccHHHHHhCCCCEEECCHHHHHHHH
Confidence 333210 2237999999999988774
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.86 E-value=1.9e-22 Score=210.58 Aligned_cols=178 Identities=20% Similarity=0.241 Sum_probs=128.0
Q ss_pred ChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEE
Q 001888 320 HSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELL 399 (1000)
Q Consensus 320 ~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il 399 (1000)
..+.++.++.+++|||++....++..+.. ...++|+|.||+.+|.+.|+........... ..........+..|+++
T Consensus 46 ~~~~l~~ll~~~~LCn~a~l~~~~~~~~~-~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v 122 (239)
T d1wpga3 46 QFDGLVELATICALCNDSSLDFNETKGVY-EKVGEATETALTTLVEKMNVFNTEVRNLSKV--ERANACNSVIRQLMKKE 122 (239)
T ss_dssp GCHHHHHHHHHHHHSCSCEEEEETTTTEE-EEESCHHHHHHHHHHHHHCTTCCCCSSSCHH--HHTTHHHHHHHHHEEEE
T ss_pred ccHHHHHHHHHHHhcCCCEeeecCCCCeE-EEcCCCCcHHHHHHHHHhCCChHHhhccchh--hhhccchhhhhhhCeEE
Confidence 34568889999999999988665544443 3458999999999999999754321110000 00000001114679999
Q ss_pred EeeCCCCCCceEEEEEEcCCC-----cEEEEEccchhHhHHHHhcc---------ChhhHHHHHHHHHHH--HHccceEE
Q 001888 400 HVLEFTSSRKRMSVMVRNPEN-----QLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRY--AEAGLRTL 463 (1000)
Q Consensus 400 ~~~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~--~~~G~r~l 463 (1000)
+++||||+||||||+++.+++ .+++|+|||||.|+++|+.. .++.++.+.+.++++ +.+|+|||
T Consensus 123 ~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvL 202 (239)
T d1wpga3 123 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCL 202 (239)
T ss_dssp EEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEE
T ss_pred EEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEE
Confidence 999999999999999998654 47899999999999999752 456677788888876 67999999
Q ss_pred EEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeee
Q 001888 464 VIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAV 516 (1000)
Q Consensus 464 ~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i 516 (1000)
++|||.++.++...+. .+. ...+.+|+||+|+|++||
T Consensus 203 a~A~k~~~~~~~~~~~-----------~~~-----~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 203 ALATRDTPPKREEMVL-----------DDS-----SRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp EEEEESSCCCGGGCCT-----------TCG-----GGHHHHTCSEEEEEEEEE
T ss_pred EEEEEECCcccccccc-----------cch-----hhHHHhcCCCEEEEEECC
Confidence 9999999875432110 000 023568999999999996
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.56 E-value=3.7e-14 Score=162.39 Aligned_cols=226 Identities=15% Similarity=0.106 Sum_probs=169.5
Q ss_pred EEecchhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHhc
Q 001888 707 YAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPAYNDWYMSCYNVFFTSLPVIALGVF 786 (1000)
Q Consensus 707 ~vl~~f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~fs~~~~~~~~~ll~~n~~~~~~p~~~~~~~ 786 (1000)
..+.+.+.+.. .||..+.|++|.+.|.+..|+..+++.+++.++. ..+++++.|++|.|++++.+|+++++.+
T Consensus 216 ~lVr~L~avE~----~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~l~---~p~pl~~~qILwinli~d~lpaiaL~~e 288 (472)
T d1wpga4 216 AIVRSLPSVET----LGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG---LPEALIPVQLLWVNLVTDGLPATALGFN 288 (472)
T ss_dssp EEESCTTHHHH----HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCSCCHHHHHHHHHTTTHHHHHHHTTC
T ss_pred chhhhHHHHHH----HHHHHHHHhHHhhhhhhhhhHHHHHHHHHHHHcC---CCccccHHHHHHHHHHhHHHHHHHHhcC
Confidence 34444554443 4999999999999999999999999999888765 4567999999999999999999999886
Q ss_pred ccCCChhhhhcCccchhccccCCccchhhHHHhhHHHHHHHHHHHHHHHhhhcccccc---------------CC-----
Q 001888 787 DQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQAFR---------------KD----- 846 (1000)
Q Consensus 787 ~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~----- 846 (1000)
+ ++++.+.+.|+ ++++.+++++++..++..|++.+++++...++.+...... .+
T Consensus 289 p--~d~~iM~~~Pr----~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (472)
T d1wpga4 289 P--PDLDIMDRPPR----SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFE 362 (472)
T ss_dssp C--CCSGGGGSCCC----CTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTC
T ss_pred C--CchhhhcCCCC----CCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHhHHhhccCCccccc
Confidence 4 44455555554 6778999999999999999999888877766544321100 00
Q ss_pred ---CcccchhhhhHHHHHHHHHHHHHHHHHHhh-cc-----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHH
Q 001888 847 ---GHAVDYEVLGVAMYSSVVWAVNCQMALSIN-YF-----TWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVE 917 (1000)
Q Consensus 847 ---g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~-----~~~~~~~~~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (1000)
..........|+.|+++++.+.++.+...+ .. .++.|.+++.++++.++++++..++|. ++. +|+
T Consensus 363 ~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~rs~~~s~~~~~~~~N~~l~~av~i~~~l~~~i~yiP~-l~~-----vf~ 436 (472)
T d1wpga4 363 GLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDP-LPM-----IFK 436 (472)
T ss_dssp CSCGGGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTT-THH-----HHT
T ss_pred ccchhhhhHhHHHHHHHHHHHHHHHHHHHHHhcCCcchhhcCccccHHHHHHHHHHHHHHHHHHHhhH-HHH-----HHc
Confidence 011112345688899888887666542221 11 245677888888888888888888883 333 567
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 001888 918 ACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFR 951 (1000)
Q Consensus 918 ~~~~~~~~w~~~i~~~~~~ll~~~i~k~~~~~~~ 951 (1000)
..++++..|++++.++++.++.+++.|++.|+|.
T Consensus 437 ~~pL~~~~w~i~l~~~~~~~~~~El~K~~~R~~~ 470 (472)
T d1wpga4 437 LKALDLTQWLMVLKISLPVIGLDEILKFIARNYL 470 (472)
T ss_dssp CCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 8899999999999999999999999999988774
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.95 E-value=3.2e-10 Score=119.60 Aligned_cols=191 Identities=15% Similarity=0.115 Sum_probs=103.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCch---------hhHhhhhccHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPD---------MEALEKQGDKENITK 589 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~---------~~~~~~~~~~~~~~~ 589 (1000)
++.+.+.++|++|+++||+++++|||+...+..+.+++++..+...++..+|.... ...+..... ..+..
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~-~~i~~ 99 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDY-RFLEK 99 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHH-HHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHH-HHHHH
Confidence 47788999999999999999999999999999999999987665444433332110 000011100 11111
Q ss_pred HHHHHHH--------------------HHHHhhhhhhc-----c---cccCccceEEEEeccchHHHhhHHHHHHHHHHH
Q 001888 590 VSLESVT--------------------KQIREGISQVN-----S---AKESKVTFGLVIDGKSLDFALDKKLEKMFLDLA 641 (1000)
Q Consensus 590 ~~~~~~~--------------------~~~~~~~~~~~-----~---~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~ 641 (1000)
...+... ........... . ...........++...........+.+.+....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 179 (271)
T d1rkqa_ 100 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKY 179 (271)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHE
T ss_pred HHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcce
Confidence 0000000 00000000000 0 000111222333322221111112222222211
Q ss_pred hhc-CceEEEcCChh--hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 642 IDC-ASVICCRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 642 ~~~-~~vi~~r~sp~--qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
... ..--+....|. .|+..++.+ +..+ ..++++|||.||++|++.|++||+|+++... ++..||++...
T Consensus 180 ~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~-lk~~a~~i~~~ 255 (271)
T d1rkqa_ 180 TVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPS-VKEVANFVTKS 255 (271)
T ss_dssp EEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHCSEECCC
T ss_pred EEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHH-HHHhCCEEcCC
Confidence 000 00012234444 699999998 4433 4599999999999999999999999776544 89999999875
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.95 E-value=2e-10 Score=117.66 Aligned_cols=182 Identities=15% Similarity=0.173 Sum_probs=96.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcccc----CceEEEEecCCchhhHhhhhccHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQ----EMKQIVITLDSPDMEALEKQGDKENITKVSLES 594 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (1000)
.+.+.+.++|++|+++|++++++|||....+..++..+++..+ ++..+.......... ....+ ......
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~----~~~~~---~~~~~~ 91 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLA----SMDEE---WILWNE 91 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESC----CCSHH---HHHHHH
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccc----cccHH---HHHHHH
Confidence 4778899999999999999999999999999999998886432 111111111100000 00000 011111
Q ss_pred HHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHh--hcCceEEEcCChhhHHHHHHHH-hcCC---
Q 001888 595 VTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAI--DCASVICCRSSPKQKALVTRLV-KGTG--- 668 (1000)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~--~~~~vi~~r~sp~qK~~iV~~l-~~~~--- 668 (1000)
+............ .......+.+.........-.++.+++..... .....+-.......|...++.+ +..|
T Consensus 92 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~ 168 (230)
T d1wr8a_ 92 IRKRFPNARTSYT---MPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKP 168 (230)
T ss_dssp HHHHCTTCCBCTT---GGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCG
T ss_pred HHHhcccccceee---cccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccch
Confidence 1111111111100 00111112222211111000111111110000 0000111222345788888887 4433
Q ss_pred CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 669 KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 669 ~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
..|+++|||.||++|++.||+||+|+++... ++..||+++..
T Consensus 169 ~~~~~iGD~~NDi~ml~~ag~~vav~na~~~-~k~~A~~v~~~ 210 (230)
T d1wr8a_ 169 KEVAHVGDGENDLDAFKVVGYKVAVAQAPKI-LKENADYVTKK 210 (230)
T ss_dssp GGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHTTCSEECSS
T ss_pred hheeeeecCccHHHHHHHCCeEEEECCCCHH-HHHhCCEEECC
Confidence 5699999999999999999999999766543 89999999875
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.88 E-value=1.5e-09 Score=110.29 Aligned_cols=129 Identities=20% Similarity=0.274 Sum_probs=91.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceE--EEEecCCchhhHhhhhccHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQ--IVITLDSPDMEALEKQGDKENITKVSLESVT 596 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1000)
+++|++.++|+.|+++|++++++||.....+..+++.+|+-..+... +.+..+..
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~----------------------- 138 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGE----------------------- 138 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSC-----------------------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhc-----------------------
Confidence 47899999999999999999999999999999999999984321100 00110000
Q ss_pred HHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhc--CCCEEEEE
Q 001888 597 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG--TGKTTLAI 674 (1000)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~--~~~~vlai 674 (1000)
..|... .-....+..|..+++.++. .-..++++
T Consensus 139 -----------------------~~g~~~----------------------~~p~~~~~~K~~~v~~~~~~~~~~~~~~v 173 (217)
T d1nnla_ 139 -----------------------YAGFDE----------------------TQPTAESGGKGKVIKLLKEKFHFKKIIMI 173 (217)
T ss_dssp -----------------------EEEECT----------------------TSGGGSTTHHHHHHHHHHHHHCCSCEEEE
T ss_pred -----------------------ccccee----------------------eeeeeccchHHHHHHHHHhccCccccEEE
Confidence 000000 0001235679999998832 23569999
Q ss_pred cCCccChHHhhhcCccccccCccc-cchhccCcEEecchhhh
Q 001888 675 GDGANDVGMLQEADIGVGISGVEG-MQAVMSSDYAIAQFRFL 715 (1000)
Q Consensus 675 GDG~ND~~mlk~AdvGIa~~g~e~-~~ak~~aD~vl~~f~~l 715 (1000)
|||.||++|++.||+|||+.++.. .+.++.||+++.+|..|
T Consensus 174 GDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 174 GDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp ESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred EeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCCHHHh
Confidence 999999999999999999965433 34667899999998765
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.84 E-value=3.3e-10 Score=119.31 Aligned_cols=61 Identities=23% Similarity=0.199 Sum_probs=50.1
Q ss_pred EcCChh--hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 650 CRSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 650 ~r~sp~--qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
..++|. .|+..++.+ +..| ..|+++|||.||++||+.|+.||+|+++... +|..||++...
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~-lk~~A~~v~~~ 248 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAEN-IKQIARYATDD 248 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHH-HHHHCSEECCC
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHH-HHHhCCEEcCC
Confidence 344554 599999988 6554 4699999999999999999999999766543 89999999876
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.81 E-value=1.4e-09 Score=111.21 Aligned_cols=175 Identities=17% Similarity=0.175 Sum_probs=97.9
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcccc----CceEEEEecCCchhhHhhhhccHHHHHHHHH
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQ----EMKQIVITLDSPDMEALEKQGDKENITKVSL 592 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 592 (1000)
+.++.+++.+++++|++.|++++++|||+...+..++...|+-.. ++.. ..+.......... .+.+..
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~-~~~~~~~~~~~~~----~~~~~~--- 89 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGI-MFDNDGSIKKFFS----NEGTNK--- 89 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTE-EECTTSCEEESSC----SHHHHH---
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceE-EEeCCccEEEecC----hHHHHH---
Confidence 345778999999999999999999999999999999988886332 1111 1111111100000 011111
Q ss_pred HHHHHHHHhhhh--hhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceE-----EEcCCh--hhHHHHHHH
Q 001888 593 ESVTKQIREGIS--QVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVI-----CCRSSP--KQKALVTRL 663 (1000)
Q Consensus 593 ~~~~~~~~~~~~--~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi-----~~r~sp--~qK~~iV~~ 663 (1000)
....+..... ................+......+. .........+ ++...| ..|+..++.
T Consensus 90 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~ 158 (225)
T d1l6ra_ 90 --FLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVR---------KEAESRGFVIFYSGYSWHLMNRGEDKAFAVNK 158 (225)
T ss_dssp --HHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHH---------HHHHTTTEEEEEETTEEEEEETTCSHHHHHHH
T ss_pred --HHHHHHHhcCcceeecccceeeeeccccCHHHHHHHH---------HHHhhcCcEEEECCcEEEecCCccchHHHHHH
Confidence 1111111000 0000001111222223333332221 1111111112 122223 479988887
Q ss_pred H-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 664 V-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 664 l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
+ +..| ..|+++|||.||++|++.||+||+|+++... ++..||+++..
T Consensus 159 l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~-~k~~ad~v~~~ 209 (225)
T d1l6ra_ 159 LKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDN-IKAVSDFVSDY 209 (225)
T ss_dssp HHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHH-HHHHCSEECSC
T ss_pred HhhhhccchhheeeecCCcchHHHHHHCCeEEEECCCcHH-HHHhCCEEECC
Confidence 7 5544 5599999999999999999999999765443 89999998765
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.80 E-value=3.8e-09 Score=111.93 Aligned_cols=59 Identities=25% Similarity=0.310 Sum_probs=49.3
Q ss_pred CChh--hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 652 SSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 652 ~sp~--qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
++|. .|+..++.+ +..| ..|+++|||.||++||+.||.||+|+++.. +++..||++...
T Consensus 207 i~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~-~~k~~A~~v~~~ 271 (285)
T d1nrwa_ 207 LSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNARE-DIKSIADAVTLT 271 (285)
T ss_dssp EEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCH-HHHHHCSEECCC
T ss_pred EecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCH-HHHHhCCEEcCC
Confidence 4454 699999988 6555 469999999999999999999999977654 389999999875
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.71 E-value=1e-08 Score=99.31 Aligned_cols=112 Identities=18% Similarity=0.146 Sum_probs=83.1
Q ss_pred HHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhh
Q 001888 526 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 605 (1000)
Q Consensus 526 e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (1000)
.+|+.|+..|+.+.++||+....+...+.++++..
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------------------- 73 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------------- 73 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------------------------
Confidence 47999999999999999999999999999888732
Q ss_pred hcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hc---CCCEEEEEcCCccCh
Q 001888 606 VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KG---TGKTTLAIGDGANDV 681 (1000)
Q Consensus 606 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~---~~~~vlaiGDG~ND~ 681 (1000)
++.- ...|...++.+ ++ ....|+++||+.||.
T Consensus 74 ------------------------------------------~~~~--~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl 109 (177)
T d1k1ea_ 74 ------------------------------------------FFLG--KLEKETACFDLMKQAGVTAEQTAYIGDDSVDL 109 (177)
T ss_dssp ------------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred ------------------------------------------cccc--cccHHHHHHHHHHHhcCCcceeEEecCCccHH
Confidence 1111 12333333333 32 336799999999999
Q ss_pred HHhhhcCccccccCccccchhccCcEEecc------hhhhHHHH-HHhhhhhh
Q 001888 682 GMLQEADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLL-LVHGHWCY 727 (1000)
Q Consensus 682 ~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~------f~~l~~ll-l~~gR~~~ 727 (1000)
+||+.|++|+++.++... ++..||||+.. .+.+..+| -..|++.+
T Consensus 110 ~~l~~~g~siap~nA~~~-vk~~A~~Vt~~~GG~GavrE~~e~il~~~~~~~~ 161 (177)
T d1k1ea_ 110 PAFAACGTSFAVADAPIY-VKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 161 (177)
T ss_dssp HHHHHSSEEEECTTSCHH-HHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHhhCCeEEEcCCccHH-HHHhCCEEeCCCCCCchHHHHHHHHHHHCCChHH
Confidence 999999999999776554 89999999986 44555554 34666543
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.70 E-value=5.1e-09 Score=109.43 Aligned_cols=55 Identities=31% Similarity=0.497 Sum_probs=46.7
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
.|+..++.+ ++.| ..++++|||.||++||+.||.||+|.++... +++.||++...
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~-lk~~A~~vt~~ 244 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKED-VKAAADYVTAP 244 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHSSEECCC
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHH-HHHhCCEEeCC
Confidence 699999888 5544 5699999999999999999999999776543 89999998765
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.67 E-value=1.5e-09 Score=114.87 Aligned_cols=55 Identities=18% Similarity=0.267 Sum_probs=46.1
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
.|+..++.+ +..+ ..|+++|||.||.+||+.||+||+|+++... ++..||+++..
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~-~k~~a~~v~~~ 265 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDS-AKSHAKCVLPV 265 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHH-HHHHSSEECSS
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHH-HHHhCCEEECC
Confidence 588888887 5443 5799999999999999999999999766544 89999999864
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.66 E-value=1.6e-09 Score=113.89 Aligned_cols=60 Identities=23% Similarity=0.327 Sum_probs=49.6
Q ss_pred cCChh--hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 651 RSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 651 r~sp~--qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
.++|. .|+..++.+ +..| ..|+|||||.||++||+.||+||+|+++... +++.||+++.+
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~-~k~~A~~i~~~ 248 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEK-VKEASDIVTLT 248 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHH-HHHHCSEECCC
T ss_pred eecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHH-HHHhCCEEcCC
Confidence 34554 699999988 5544 4599999999999999999999999766544 89999999875
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.65 E-value=5.1e-08 Score=99.18 Aligned_cols=41 Identities=10% Similarity=0.092 Sum_probs=38.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
.+.+.+.++|++|+++|++++++|||+...+..+.+++++-
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 47789999999999999999999999999999999999863
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.63 E-value=6.5e-08 Score=96.40 Aligned_cols=129 Identities=19% Similarity=0.132 Sum_probs=87.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
+..++....++.+ +.+.+.++.|+.............++..............
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------------------- 121 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 121 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS--------------------------
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccc--------------------------
Confidence 4556666666665 5789999999999988888888888754322211111110
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
.........+..+...++.++.....|+|||||.
T Consensus 122 ----------------------------------------------~~~~~~~~~~~~~~~~~~~~~i~~~eviaiGDg~ 155 (206)
T d1rkua_ 122 ----------------------------------------------RVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSY 155 (206)
T ss_dssp ----------------------------------------------CEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSS
T ss_pred ----------------------------------------------ccccccccchhhHHHHHHHhcccccceEEecCCc
Confidence 0012223334445556666677778999999999
Q ss_pred cChHHhhhcCccccccCccccchhccCcEEec-chhhhHHHHHH
Q 001888 679 NDVGMLQEADIGVGISGVEGMQAVMSSDYAIA-QFRFLERLLLV 721 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~-~f~~l~~lll~ 721 (1000)
||++|++.||+|||| ++...-.++++||+.. ++..+...|+.
T Consensus 156 NDi~Ml~~Ag~gIAm-na~~~v~~~~~~~~~~~~~~d~~~~~~~ 198 (206)
T d1rkua_ 156 NDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLKREFLK 198 (206)
T ss_dssp TTHHHHHHSSEEEEE-SCCHHHHHHCTTSCEECSHHHHHHHHHH
T ss_pred cCHHHHHhCCccEEE-CCCHHHHHhCCCceeecCHHHHHHHHHH
Confidence 999999999999999 4433335678899764 57778877543
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.56 E-value=5.7e-08 Score=99.73 Aligned_cols=43 Identities=7% Similarity=0.006 Sum_probs=38.5
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
.+...+.++++|++|+++|++++++|||+...+..+.+.+++.
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~ 57 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc
Confidence 4555678999999999999999999999999999999999864
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.42 E-value=1.6e-07 Score=95.33 Aligned_cols=136 Identities=14% Similarity=0.093 Sum_probs=92.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCce-EEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMK-QIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+...-.. ....+++..
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~------------------------ 130 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYI------------------------ 130 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBC------------------------
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcc------------------------
Confidence 4789999999999999999999999999999999988887532100 011111000
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCC
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 677 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG 677 (1000)
...+... .....+...|..|..+++.++..+..|++|||+
T Consensus 131 ---------------------~~~~~~~-------------------~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs 170 (226)
T d2feaa1 131 ---------------------HIDWPHS-------------------CKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDS 170 (226)
T ss_dssp ---------------------EEECTTC-------------------CCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECC
T ss_pred ---------------------eeccccc-------------------cccccccCCHHHHHHHHHHhcCCCceEEEEeCc
Confidence 0000000 011234567888999999998788899999999
Q ss_pred ccChHHhhhcCccccccCccccchhccCc-EEecchhhhHHH
Q 001888 678 ANDVGMLQEADIGVGISGVEGMQAVMSSD-YAIAQFRFLERL 718 (1000)
Q Consensus 678 ~ND~~mlk~AdvGIa~~g~e~~~ak~~aD-~vl~~f~~l~~l 718 (1000)
.||++|++.||+++++.+....-.....+ ..+.+|+.+...
T Consensus 171 ~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~ 212 (226)
T d2feaa1 171 VTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKE 212 (226)
T ss_dssp GGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHH
T ss_pred hhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHH
Confidence 99999999999999885422110122333 345567777665
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.36 E-value=2.9e-07 Score=93.19 Aligned_cols=65 Identities=18% Similarity=0.295 Sum_probs=48.0
Q ss_pred EcCChh--hHHHHHHHHhcCCCEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchhhhHHH
Q 001888 650 CRSSPK--QKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 650 ~r~sp~--qK~~iV~~l~~~~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
....|. .|+..++.+... ..++++||+.||++||+.|+.|++|...+ ++..|++.+.+-..+..+
T Consensus 151 idi~p~g~~Kg~al~~l~~~-~~~i~~GDs~ND~~Mf~~~~~~~av~~g~---~~~~A~~~~~~~~ev~~~ 217 (229)
T d1u02a_ 151 IELRVPGVNKGSAIRSVRGE-RPAIIAGDDATDEAAFEANDDALTIKVGE---GETHAKFHVADYIEMRKI 217 (229)
T ss_dssp EEEECTTCCHHHHHHHHHTT-SCEEEEESSHHHHHHHHTTTTSEEEEESS---SCCCCSEEESSHHHHHHH
T ss_pred EEEecCCCCHHHHHHHHhcc-ccceeecCCCChHHHHhccCCeEEEEeCC---CCccCeEEcCCHHHHHHH
Confidence 344444 599999999433 45789999999999999998888775333 346889999875554444
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.32 E-value=4.1e-07 Score=90.58 Aligned_cols=122 Identities=19% Similarity=0.171 Sum_probs=80.2
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
.++.+++.+.++.++..|..+.++||.....+.......+....-..........
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------- 128 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGK------------------------- 128 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE-------------------------
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccc-------------------------
Confidence 4788999999999999999999999999988888888776643211111100000
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH----hcCCCEEEE
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV----KGTGKTTLA 673 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l----~~~~~~vla 673 (1000)
..... ...-..+..|...+..+ +.....++|
T Consensus 129 ------------------~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 163 (210)
T d1j97a_ 129 ------------------LTGDV---------------------------EGEVLKENAKGEILEKIAKIEGINLEDTVA 163 (210)
T ss_dssp ------------------EEEEE---------------------------ECSSCSTTHHHHHHHHHHHHHTCCGGGEEE
T ss_pred ------------------ccccc---------------------------cccccccccccchhhhHHHHhcccccceEE
Confidence 00000 00001112233333322 333456999
Q ss_pred EcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 674 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 674 iGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
+|||.||++|++.||+||||.+.+. .+..||+++..
T Consensus 164 iGDs~nDi~m~~~ag~~va~na~~~--lk~~Ad~vi~~ 199 (210)
T d1j97a_ 164 VGDGANDISMFKKAGLKIAFCAKPI--LKEKADICIEK 199 (210)
T ss_dssp EESSGGGHHHHHHCSEEEEESCCHH--HHTTCSEEECS
T ss_pred ecCCcChHHHHHHCCCCEEECCCHH--HHHhCCEEEcC
Confidence 9999999999999999999954443 78899999975
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.21 E-value=1.2e-07 Score=107.52 Aligned_cols=124 Identities=19% Similarity=0.142 Sum_probs=91.3
Q ss_pred CCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHH
Q 001888 95 TDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGL 174 (1000)
Q Consensus 95 ~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (1000)
......++|.++++++....+..+..+.+................. ..| .......+..++
T Consensus 125 ~~~~~~~~P~d~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----------------~~~~~~~~~~ai 185 (472)
T d1wpga4 125 AATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHG---GSW----------------IRGAIYYFKIAV 185 (472)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSSCCSS---SCS----------------SSCGGGHHHHHH
T ss_pred ccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhh----------------HHHHHHHHHHHH
Confidence 3455668999999999988876665555444433211111100000 011 112234677889
Q ss_pred HHhhccccceehhhHHHHHHHhHHHhhcccccccccCCCcceeccccccccccceeEEEEcCC--CccccceeEE
Q 001888 175 MLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKT--GTLTCNSMEF 247 (1000)
Q Consensus 175 ~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKT--GTLT~n~m~~ 247 (1000)
.+.+.+||++||++++++.++++. +| ++++++||+++++|+||+..++|+||| +|||.|.+.+
T Consensus 186 ~l~V~~iPEgLp~~vti~La~~~~------rm----ak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v 250 (472)
T d1wpga4 186 ALAVAAIPEGLPAVITTCLALGTR------RM----AKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEV 250 (472)
T ss_dssp HHHHHHSCTTHHHHHHHHHHHHHH------HH----HTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhChhhHHHHHHHHHHHHHH------HH----HhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHHH
Confidence 999999999999999999999998 77 899999999999999999999999998 9999998765
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.21 E-value=4.8e-07 Score=92.89 Aligned_cols=53 Identities=23% Similarity=0.320 Sum_probs=43.1
Q ss_pred hhhHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcE
Q 001888 654 PKQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDY 707 (1000)
Q Consensus 654 p~qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~ 707 (1000)
...|+..++.+ +..| ..|+++|||.||.+||+.||.||+|+++... +++.||.
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~-lk~~a~~ 216 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPE-LLHWYDQ 216 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHH-HHHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHH-HHHHhhc
Confidence 34699999998 5554 4599999999999999999999999765544 6777764
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.14 E-value=7.8e-07 Score=90.58 Aligned_cols=54 Identities=13% Similarity=0.231 Sum_probs=45.4
Q ss_pred hHHHHHHHH-hcCCCEEEEEcC----CccChHHhhhcC-ccccccCccccchhccCcEEec
Q 001888 656 QKALVTRLV-KGTGKTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSDYAIA 710 (1000)
Q Consensus 656 qK~~iV~~l-~~~~~~vlaiGD----G~ND~~mlk~Ad-vGIa~~g~e~~~ak~~aD~vl~ 710 (1000)
.|+..++.+ +.....|+++|| |.||.+||+.|+ .|++|++++.. ++..+|++++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~-~k~~~~~~~~ 244 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDT-VQRCREIFFP 244 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHH-HHHHHHHHCT
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHH-HHHHHHhcCC
Confidence 599999999 666688999999 569999999998 69999887665 7888887653
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.72 E-value=7.9e-06 Score=82.85 Aligned_cols=49 Identities=24% Similarity=0.359 Sum_probs=37.1
Q ss_pred hHHHHHHHH-hcCCCEEEEEcC----CccChHHhhhcC-ccccccCccccchhccCc
Q 001888 656 QKALVTRLV-KGTGKTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSD 706 (1000)
Q Consensus 656 qK~~iV~~l-~~~~~~vlaiGD----G~ND~~mlk~Ad-vGIa~~g~e~~~ak~~aD 706 (1000)
.|+..++.+ +.....|+++|| |.||++||+.|+ .|+++++.+. .+..++
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~--~~~~~~ 239 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPED--TRRICE 239 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHH--HHHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHH--HHHHHH
Confidence 598888888 556688999999 889999999998 6888876554 555443
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.49 E-value=7.3e-05 Score=74.53 Aligned_cols=124 Identities=19% Similarity=0.147 Sum_probs=84.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.++++++++.|++.|++++++||.....+..+.+.+|+...-..++ ....
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~--~~~~-------------------------- 146 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEML--GGQS-------------------------- 146 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEE--CTTT--------------------------
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccc--cccc--------------------------
Confidence 568999999999999999999999999999999999999853211110 0000
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
+-.....|+--..+.+.++-....+++|||+.
T Consensus 147 ------------------------------------------------~~~~kp~p~~~~~~~~~~~~~~~~~~~igD~~ 178 (224)
T d2hsza1 147 ------------------------------------------------LPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQ 178 (224)
T ss_dssp ------------------------------------------------SSSCTTSSHHHHHHHHHHTCCGGGEEEEESSH
T ss_pred ------------------------------------------------cccccccchhhHHHHHHhhhhhhccchhcCcH
Confidence 00011123333334444444557799999999
Q ss_pred cChHHhhhcCc-ccccc---CccccchhccCcEEecchhhhHHH
Q 001888 679 NDVGMLQEADI-GVGIS---GVEGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 679 ND~~mlk~Adv-GIa~~---g~e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
+|+.+-+.||+ .|++. +.........+|+++.+++.|.++
T Consensus 179 ~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~i 222 (224)
T d2hsza1 179 NDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 222 (224)
T ss_dssp HHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred HHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHh
Confidence 99999999997 34442 111111345689999998888765
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=97.40 E-value=7.4e-05 Score=68.35 Aligned_cols=107 Identities=19% Similarity=0.302 Sum_probs=75.7
Q ss_pred eCChhHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchh
Q 001888 352 AESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADS 431 (1000)
Q Consensus 352 ~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~ 431 (1000)
+.||..+|++++|++.+..... ...+.-...+||+...+...+.+ +| ..+..|++.
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~g~~~---~g--~~v~~G~~~ 84 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRER-------------------DVQSLHATFVPFTAQSRMSGINI---DN--RMIRKGSVD 84 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCC-------------------CTTTTTCEEEEEETTTTEEEEEE---TT--EEEEEECHH
T ss_pred CCchHHHHHHHHHHHhcCCCcc-------------------ccccccccccccccccceEEEEE---CC--EEEEecHHH
Confidence 6899999999999987543211 01111122345555555554443 23 356679998
Q ss_pred HhHHHHhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceee
Q 001888 432 VMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILL 511 (1000)
Q Consensus 432 ~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~l 511 (1000)
.+...+...+.....++.+.++.++.+|.+++.+| .|-+++
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va---------------------------------------~d~~~~ 125 (136)
T d2a29a1 85 AIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVV---------------------------------------EGSRVL 125 (136)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEE---------------------------------------ETTEEE
T ss_pred HHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEE---------------------------------------ECCEEE
Confidence 88776655444556778889999999999999999 477999
Q ss_pred EEeeeccccc
Q 001888 512 GATAVEDKLQ 521 (1000)
Q Consensus 512 G~i~i~D~lr 521 (1000)
|++++.|++|
T Consensus 126 G~i~l~D~iK 135 (136)
T d2a29a1 126 GVIALKDIVK 135 (136)
T ss_dssp EEEEEEESSC
T ss_pred EEEEEEeecC
Confidence 9999999986
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.34 E-value=0.00026 Score=70.19 Aligned_cols=121 Identities=13% Similarity=0.089 Sum_probs=81.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.|++.++++.|+++|+++.++||.....+..+.+..|+-.--..+
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i--------------------------------- 134 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDAL--------------------------------- 134 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccccccccc---------------------------------
Confidence 35699999999999999999999999999999999999984321111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
+.+... -.+.-.|+-=..+++.+.-....+++|||+.
T Consensus 135 ---------------------~~~~~~----------------------~~~Kp~~~~~~~~~~~l~~~~~~~l~igD~~ 171 (218)
T d1te2a_ 135 ---------------------ASAEKL----------------------PYSKPHPQVYLDCAAKLGVDPLTCVALEDSV 171 (218)
T ss_dssp ---------------------EECTTS----------------------SCCTTSTHHHHHHHHHHTSCGGGEEEEESSH
T ss_pred ---------------------cccccc----------------------ccchhhHHHHHHHHHHcCCCchhcEEEeeCH
Confidence 111100 0011122223344444433446799999999
Q ss_pred cChHHhhhcCccc-cccCcc--ccchhccCcEEecchhhh
Q 001888 679 NDVGMLQEADIGV-GISGVE--GMQAVMSSDYAIAQFRFL 715 (1000)
Q Consensus 679 ND~~mlk~AdvGI-a~~g~e--~~~ak~~aD~vl~~f~~l 715 (1000)
+|+.|-+.||+.. ++.+.. .......||+++.++..|
T Consensus 172 ~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el 211 (218)
T d1te2a_ 172 NGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL 211 (218)
T ss_dssp HHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGC
T ss_pred HHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhC
Confidence 9999999999753 443321 111235689999998875
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.09 E-value=0.00053 Score=68.38 Aligned_cols=42 Identities=21% Similarity=0.203 Sum_probs=37.6
Q ss_pred cccCCcHHHHHHHHHcC-CeEEEEcCCchhhHHHHHHHcCccc
Q 001888 519 KLQKGVPECIDKLAQAG-IKVWVLTGDKMETAINIGYACSLLR 560 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aG-Ikv~mlTGD~~~ta~~ia~~~gl~~ 560 (1000)
++-||+.++++.|++.| +++.++||.....+..+.+..|+..
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~ 133 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH 133 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccc
Confidence 45689999999999987 8999999999999999999999854
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.79 E-value=0.0015 Score=63.66 Aligned_cols=118 Identities=18% Similarity=0.191 Sum_probs=76.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.||+.++++.|++.|+++.++|+... .+..+.+..|+...-.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~----------------------------------- 125 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFT----------------------------------- 125 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEE-----------------------------------
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccc-----------------------------------
Confidence 5679999999999999999999998654 5566777788743100
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
.++.+.. +....-.|+--..+++.+.-....|++|||+.
T Consensus 126 -------------------~i~~s~~----------------------~~~~Kp~~~~~~~~~~~~~~~p~~~l~VgD~~ 164 (204)
T d2go7a1 126 -------------------EILTSQS----------------------GFVRKPSPEAATYLLDKYQLNSDNTYYIGDRT 164 (204)
T ss_dssp -------------------EEECGGG----------------------CCCCTTSSHHHHHHHHHHTCCGGGEEEEESSH
T ss_pred -------------------ccccccc----------------------ccccchhHHHHHHHHHHhCCCCceEEEEeCCH
Confidence 0111100 01112233333444555543446899999999
Q ss_pred cChHHhhhcCccc-cccCccccchhccCcEEecchhhhHHH
Q 001888 679 NDVGMLQEADIGV-GISGVEGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 679 ND~~mlk~AdvGI-a~~g~e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
+|+.+-+.||+.. ++.... ..+|..+.++..+.++
T Consensus 165 ~Di~~A~~~G~~~i~v~~~~-----~~~~~~~~~~~dl~~l 200 (204)
T d2go7a1 165 LDVEFAQNSGIQSINFLEST-----YEGNHRIQALADISRI 200 (204)
T ss_dssp HHHHHHHHHTCEEEESSCCS-----CTTEEECSSTTHHHHH
T ss_pred HHHHHHHHcCCeEEEEcCCC-----CCcCeecCCHHHHHHH
Confidence 9999999999853 453221 2467777777766665
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.78 E-value=0.0013 Score=64.49 Aligned_cols=42 Identities=12% Similarity=0.215 Sum_probs=36.6
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 560 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 560 (1000)
.++.+++.+.++.++..+ ++.++|+.....+..+....|+-.
T Consensus 83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~ 124 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHH 124 (210)
T ss_dssp CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGG
T ss_pred ccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccc
Confidence 367899999999999875 899999999999999999999753
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.70 E-value=0.00066 Score=69.06 Aligned_cols=41 Identities=29% Similarity=0.282 Sum_probs=37.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+|+.++++.|++.|+++.++||.....+..+.+..|+.
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~ 139 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ 139 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhc
Confidence 57899999999999999999999999999998888888774
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.46 E-value=0.0033 Score=64.52 Aligned_cols=47 Identities=19% Similarity=0.306 Sum_probs=42.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceE
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQ 565 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~ 565 (1000)
++|+|+++.++.|++.|+++.++||--...+..+++++|+..++..+
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I 181 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKV 181 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEE
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceE
Confidence 48999999999999999999999999999999999999987655333
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=96.40 E-value=0.00049 Score=60.12 Aligned_cols=32 Identities=19% Similarity=0.380 Sum_probs=28.4
Q ss_pred CCCCeEEeceeecCCCeEEEEEEEecchhhHhh
Q 001888 60 SPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ 92 (1000)
Q Consensus 60 ~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki~~ 92 (1000)
+..|++|+||.+.+ |+++|+|++||.+|.+.+
T Consensus 79 ~~~n~lf~GT~V~~-G~~~~~V~~tG~~T~~G~ 110 (115)
T d1wpga1 79 DKKNMLFSGTNIAA-GKALGIVATTGVSTEIGK 110 (115)
T ss_dssp GCTTEECTTCEEEE-CEEEEEEEECGGGSHHHH
T ss_pred cccceEEeccEEEe-eeEEEEEEEEccccHHHH
Confidence 46799999999996 999999999999997644
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.35 E-value=0.0027 Score=60.76 Aligned_cols=65 Identities=17% Similarity=0.206 Sum_probs=43.8
Q ss_pred hhhHHHHHHHHhcCCCEEEEEcCCccChHHhhhcCcc--ccc-cCccc-cchhccCcEEecchhhhHHH
Q 001888 654 PKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIG--VGI-SGVEG-MQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 654 p~qK~~iV~~l~~~~~~vlaiGDG~ND~~mlk~AdvG--Ia~-~g~e~-~~ak~~aD~vl~~f~~l~~l 718 (1000)
|.--..+.+.+.-....++||||..+|+.|=+.|+++ +.+ .|... ......||+++.++..+.+.
T Consensus 111 p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ 179 (182)
T d2gmwa1 111 PGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 179 (182)
T ss_dssp CHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred cccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHH
Confidence 3333444455533345689999999999999999996 333 23211 12345699999999888776
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.19 E-value=0.0049 Score=61.12 Aligned_cols=124 Identities=15% Similarity=0.136 Sum_probs=79.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.|++.++++.|+ +|++++++|+........+.+.+|+...-..+
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i--------------------------------- 145 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSI--------------------------------- 145 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEE---------------------------------
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccccccc---------------------------------
Confidence 46799999999997 58999999998888888888888874321111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCC-
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG- 677 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG- 677 (1000)
+.+.+. -...-.|+-=..+++.+.-....+++|||.
T Consensus 146 ---------------------~~s~~~----------------------~~~KP~~~~~~~~~~~l~~~p~~~l~vgD~~ 182 (230)
T d1x42a1 146 ---------------------TTSEEA----------------------GFFKPHPRIFELALKKAGVKGEEAVYVGDNP 182 (230)
T ss_dssp ---------------------EEHHHH----------------------TBCTTSHHHHHHHHHHHTCCGGGEEEEESCT
T ss_pred ---------------------cccccc----------------------cccchhhHHHHHHHhhhcccccccceeecCc
Confidence 000000 001111222223333343334569999997
Q ss_pred ccChHHhhhcCccc-ccc-CccccchhccCcEEecchhhhHHHH
Q 001888 678 ANDVGMLQEADIGV-GIS-GVEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 678 ~ND~~mlk~AdvGI-a~~-g~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
.+|+.+=+.||+.. .+. +....+....+|+++.+++.+..+|
T Consensus 183 ~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~l 226 (230)
T d1x42a1 183 VKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIV 226 (230)
T ss_dssp TTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHHHHHH
T ss_pred HhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHHHHHH
Confidence 58999999888753 332 2222234567899999999887773
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.15 E-value=0.0014 Score=64.07 Aligned_cols=122 Identities=13% Similarity=0.142 Sum_probs=78.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.||+.++++.|+ +++++.++|+.....+..+.+..|+...-..
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 126 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMRMAV---------------------------------- 126 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGGEEE----------------------------------
T ss_pred ccccchhhhhhhhc-ccccccccccccccccccccccccccccccc----------------------------------
Confidence 46699999999997 4799999999999999999888887432100
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
++.+... -...-.|+--..+++.+.-....+++|||+.
T Consensus 127 --------------------i~~~~~~----------------------~~~KP~p~~~~~~~~~~~~~~~~~l~VgDs~ 164 (207)
T d2hdoa1 127 --------------------TISADDT----------------------PKRKPDPLPLLTALEKVNVAPQNALFIGDSV 164 (207)
T ss_dssp --------------------EECGGGS----------------------SCCTTSSHHHHHHHHHTTCCGGGEEEEESSH
T ss_pred --------------------ccccccc----------------------ccchhhhhhhcccccceeeeccceeEecCCH
Confidence 1111000 0011123333344444432335689999999
Q ss_pred cChHHhhhcCccccc--cCccccchhccCcEEecchhhhHH
Q 001888 679 NDVGMLQEADIGVGI--SGVEGMQAVMSSDYAIAQFRFLER 717 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~--~g~e~~~ak~~aD~vl~~f~~l~~ 717 (1000)
+|+.+-+.||+.... .|.........+|+++.++..+.+
T Consensus 165 ~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dll~ 205 (207)
T d2hdoa1 165 SDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILE 205 (207)
T ss_dssp HHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGG
T ss_pred HHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHHHHHh
Confidence 999999999987522 122222234678999887766643
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.09 E-value=0.0015 Score=60.21 Aligned_cols=30 Identities=23% Similarity=0.269 Sum_probs=28.0
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCch
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKM 546 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~ 546 (1000)
+|++.+++.+.++.|+++|++++++||++.
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRES 63 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcH
Confidence 578999999999999999999999999974
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=95.82 E-value=0.0048 Score=61.57 Aligned_cols=43 Identities=16% Similarity=0.190 Sum_probs=38.0
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
.-.+.|++.++++.|+++|+++.++|+............+|+.
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~ 167 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEG 167 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTB
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcc
Confidence 3456899999999999999999999999998888888888864
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=95.77 E-value=0.029 Score=56.15 Aligned_cols=38 Identities=5% Similarity=0.134 Sum_probs=31.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 556 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 556 (1000)
.+=+++.++|+.|+++|++++++|+....+...++..+
T Consensus 18 ~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 18 EPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp EECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 33478899999999999999999998877777776654
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=95.41 E-value=0.096 Score=52.09 Aligned_cols=68 Identities=13% Similarity=0.131 Sum_probs=41.2
Q ss_pred EEEcCChhhHHHHHHHHhcCCCEEEEEcCCc-cChHHhhhcCc-cccc-cC----ccccchhccCcEEecchhhh
Q 001888 648 ICCRSSPKQKALVTRLVKGTGKTTLAIGDGA-NDVGMLQEADI-GVGI-SG----VEGMQAVMSSDYAIAQFRFL 715 (1000)
Q Consensus 648 i~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~-ND~~mlk~Adv-GIa~-~g----~e~~~ak~~aD~vl~~f~~l 715 (1000)
...+-+|+--..+.+.+.-.-..++||||+. +|+.|-++||+ +|.+ +| .+.......+|+++.++..|
T Consensus 173 ~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL 247 (250)
T d2c4na1 173 YVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI 247 (250)
T ss_dssp ECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred hcccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHh
Confidence 3344455544445555533445699999996 59999999997 2332 12 12111233469999887664
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.34 E-value=0.018 Score=57.43 Aligned_cols=40 Identities=20% Similarity=0.283 Sum_probs=35.2
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccc
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 560 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 560 (1000)
+.|++.++++.|++ |++++++|+..........+.+|+..
T Consensus 110 ~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~ 149 (247)
T d2gfha1 110 LADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQS 149 (247)
T ss_dssp CCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGG
T ss_pred cCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccc
Confidence 56899999999985 89999999999888888888888754
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.10 E-value=0.017 Score=53.70 Aligned_cols=40 Identities=23% Similarity=0.259 Sum_probs=30.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCch-hhHHHHHHHcCc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKM-ETAINIGYACSL 558 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~-~ta~~ia~~~gl 558 (1000)
++.|++.++++.|+++|+++.++|+-+. ..+...-+..++
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~ 86 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDL 86 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccc
Confidence 5789999999999999999999997654 344444444444
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=94.64 E-value=0.03 Score=54.41 Aligned_cols=124 Identities=13% Similarity=0.109 Sum_probs=80.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
.+.+++.++++.+++.|+++.++|+-....+.......++...-..++.
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~------------------------------- 141 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLS------------------------------- 141 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEE-------------------------------
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceee-------------------------------
Confidence 4668999999999999999999999998888888877776543211111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
+... -....+|+-=..+.+.+.-.-..+++|||..
T Consensus 142 -----------------------s~~~----------------------~~~KP~p~~~~~~~~~~g~~p~e~l~VgD~~ 176 (220)
T d1zrna_ 142 -----------------------VDPV----------------------QVYKPDNRVYELAEQALGLDRSAILFVASNA 176 (220)
T ss_dssp -----------------------SGGG----------------------TCCTTSHHHHHHHHHHHTSCGGGEEEEESCH
T ss_pred -----------------------eeee----------------------eccccHHHHHHHHHHHhCCCCceEEEEecCh
Confidence 0000 0011122222333344432335699999999
Q ss_pred cChHHhhhcCccc-cc--cCccccchhccCcEEecchhhhHHH
Q 001888 679 NDVGMLQEADIGV-GI--SGVEGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 679 ND~~mlk~AdvGI-a~--~g~e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
+|+.+=+.||+-. .+ .+.........+|+++.++..|..+
T Consensus 177 ~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el~~l 219 (220)
T d1zrna_ 177 WDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL 219 (220)
T ss_dssp HHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred HhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHHHhh
Confidence 9999999998774 23 2333333445689999887766543
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=94.53 E-value=0.034 Score=53.92 Aligned_cols=27 Identities=30% Similarity=0.342 Sum_probs=24.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDK 545 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~ 545 (1000)
++-|++.++|+.|+++|+++.++|...
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~ 74 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQS 74 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECH
T ss_pred EecccHHHHHHHHHhhCCeEEEecccc
Confidence 367999999999999999999999743
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=94.44 E-value=0.19 Score=50.06 Aligned_cols=61 Identities=18% Similarity=0.277 Sum_probs=40.5
Q ss_pred HHHHHHHhcCCCEEEEEcCCc-cChHHhhhcCc-cccc-cCc---cc-cchhccCcEEecchhhhHHH
Q 001888 658 ALVTRLVKGTGKTTLAIGDGA-NDVGMLQEADI-GVGI-SGV---EG-MQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 658 ~~iV~~l~~~~~~vlaiGDG~-ND~~mlk~Adv-GIa~-~g~---e~-~~ak~~aD~vl~~f~~l~~l 718 (1000)
..+.+.+.-....++||||+. +|+.+-+.||+ +|.+ +|. +. ..+...+|+++.++..|.++
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~ 259 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKA 259 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHH
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHH
Confidence 444454544456799999995 69999999997 4443 221 11 11223469999998888776
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=94.37 E-value=0.023 Score=54.31 Aligned_cols=41 Identities=12% Similarity=0.156 Sum_probs=33.2
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCch----hhHHHHHHHcCccc
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDKM----ETAINIGYACSLLR 560 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~~----~ta~~ia~~~gl~~ 560 (1000)
+.+++.+.++.+++.|++|+.+|||.. .|+.+.-+.+|+..
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~ 131 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA 131 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCc
Confidence 457999999999999999999999874 35566666677743
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.19 E-value=0.039 Score=52.27 Aligned_cols=40 Identities=15% Similarity=0.296 Sum_probs=33.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+|+++.++.|++.|++++++|+.+... ..+.+..++.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~ 118 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIA 118 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCG
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhccc
Confidence 567999999999999999999999976544 4566777764
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=94.05 E-value=0.022 Score=55.53 Aligned_cols=42 Identities=14% Similarity=0.123 Sum_probs=34.4
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 560 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 560 (1000)
..++-+|+.+.++.|++.|+++.++|+... +.......|+..
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~ 130 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTG 130 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGG
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccc
Confidence 456789999999999999999999999754 566677777743
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=93.33 E-value=0.0094 Score=60.07 Aligned_cols=68 Identities=13% Similarity=0.162 Sum_probs=43.9
Q ss_pred eEEEcCChhhHHHHHHHHhcCCCEEEEEcCCcc-ChHHhhhcCc-ccccc-C---ccc-cchhccCcEEecchhh
Q 001888 647 VICCRSSPKQKALVTRLVKGTGKTTLAIGDGAN-DVGMLQEADI-GVGIS-G---VEG-MQAVMSSDYAIAQFRF 714 (1000)
Q Consensus 647 vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~N-D~~mlk~Adv-GIa~~-g---~e~-~~ak~~aD~vl~~f~~ 714 (1000)
..+..-+|+--..+.+.+.-....++||||..+ |+.+-++||+ +|.+. | .+. .......|+++.++..
T Consensus 176 ~~~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e 250 (253)
T d1wvia_ 176 IIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAE 250 (253)
T ss_dssp EECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGG
T ss_pred EEeccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHH
Confidence 334455666666666666444467999999976 9999999998 55542 2 211 1122234999988654
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.40 E-value=0.43 Score=45.49 Aligned_cols=156 Identities=17% Similarity=0.169 Sum_probs=83.4
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHH
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQI 599 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (1000)
+-||+.++++.+++. ....++|---..-+.++|+..|+..+ ... +.-..+...+......+.+... ++...
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e---~~~-T~~~lD~~~~p~ee~e~ll~i~---~~~~d- 152 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGE---LHG-TEVDFDSIAVPEGLREELLSII---DVIAS- 152 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSE---EEE-EBCCGGGCCCCHHHHHHHHHHH---HHHHH-
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCce---eec-ccccccccCCChHHHHHHHHHh---hhccC-
Confidence 559999999999876 55666666666778899999999421 211 1111111111111111111100 00000
Q ss_pred HhhhhhhcccccCccceEEEEeccchHHHhhHH-HHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCC-CEEEEEcC
Q 001888 600 REGISQVNSAKESKVTFGLVIDGKSLDFALDKK-LEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG-KTTLAIGD 676 (1000)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~-~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~-~~vlaiGD 676 (1000)
-++..+..++.+- -+-...+++...++| --..|..+++.. ...+ ...+.+||
T Consensus 153 --------------------~~~eel~e~~d~~f~~~e~~~i~e~Vk~V-----Ggg~k~~i~~~~~~~~~~~~~~~VGD 207 (308)
T d1y8aa1 153 --------------------LSGEELFRKLDELFSRSEVRKIVESVKAV-----GAGEKAKIMRGYCESKGIDFPVVVGD 207 (308)
T ss_dssp --------------------CCHHHHHHHHHHHHHSHHHHHHHHTCBCC-----CHHHHHHHHHHHHHHHTCSSCEEEEC
T ss_pred --------------------ccHHHHHHHHHHHhccchHhhHHhhhccc-----CCchhHHHHHhhcccccCCcceeccC
Confidence 0111111111110 001122333334433 235677777766 3222 34599999
Q ss_pred CccChHHhhhc----CccccccCccccchhccCcEEecc
Q 001888 677 GANDVGMLQEA----DIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 677 G~ND~~mlk~A----dvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
+..|+.||+.| |++|+..|++- +...||+++..
T Consensus 208 SITDve~Lr~~r~~gGlaIsFNGN~Y--al~eA~VaiiS 244 (308)
T d1y8aa1 208 SISDYKMFEAARGLGGVAIAFNGNEY--ALKHADVVIIS 244 (308)
T ss_dssp SGGGHHHHHHHHHTTCEEEEESCCHH--HHTTCSEEEEC
T ss_pred ccccHHHHHHHhcCCCeeEEecCccc--cccccceEEec
Confidence 99999999998 45556678877 88899999876
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=91.26 E-value=0.078 Score=51.42 Aligned_cols=60 Identities=10% Similarity=0.196 Sum_probs=40.8
Q ss_pred HHHHHhcCCCEEEEEcCCccChHHhhhcCcc-ccccCcccc------c-hhccCcEEecchhhhHHHH
Q 001888 660 VTRLVKGTGKTTLAIGDGANDVGMLQEADIG-VGISGVEGM------Q-AVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 660 iV~~l~~~~~~vlaiGDG~ND~~mlk~AdvG-Ia~~g~e~~------~-ak~~aD~vl~~f~~l~~ll 719 (1000)
+.+.+.-....+++|||+.+|+.+=+.||+- |++.+.... . ....||+++.+++.|..+|
T Consensus 150 ~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll 217 (222)
T d2fdra1 150 GAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 217 (222)
T ss_dssp HHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred HHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHH
Confidence 3333433446799999999999999999974 455433211 0 1124999999999887764
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=88.99 E-value=0.13 Score=47.21 Aligned_cols=27 Identities=30% Similarity=0.420 Sum_probs=24.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDK 545 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~ 545 (1000)
++-|++.++++.|+++|++++++|...
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~ 56 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQD 56 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECT
T ss_pred eECccHHHHHHHHHHcCCceeeecccc
Confidence 457999999999999999999999753
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=86.10 E-value=0.25 Score=47.35 Aligned_cols=40 Identities=8% Similarity=0.167 Sum_probs=28.7
Q ss_pred hhhHHHHHHHHhcCCCEEEEEcCCccChHHhhhcCc-cccc
Q 001888 654 PKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADI-GVGI 693 (1000)
Q Consensus 654 p~qK~~iV~~l~~~~~~vlaiGDG~ND~~mlk~Adv-GIa~ 693 (1000)
|+--..+++.++-.-..+++|||...|+.+-+.||+ +|.+
T Consensus 160 p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V 200 (222)
T d1cr6a1 160 PQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILV 200 (222)
T ss_dssp HHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEEC
T ss_pred hHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEE
Confidence 444445555554444568999999999999999997 4555
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=85.00 E-value=0.99 Score=43.60 Aligned_cols=41 Identities=15% Similarity=0.160 Sum_probs=33.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 560 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 560 (1000)
.++-+++.+++++|+ |+++.++|+.+...+.......|+..
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~ 132 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTD 132 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccc
Confidence 356789999999885 78999999999888888887777753
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.61 E-value=0.87 Score=43.07 Aligned_cols=29 Identities=17% Similarity=0.274 Sum_probs=25.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchh
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKME 547 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ 547 (1000)
++.+++.+.++.|++.|++++++|+....
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~ 127 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLD 127 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred CCCccHHHHHHHHHhccCccccccccchh
Confidence 36789999999999999999999976543
|