Citrus Sinensis ID: 001910
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 997 | 2.2.26 [Sep-21-2011] | |||||||
| Q8VHC8 | 1007 | Lysosomal alpha-mannosida | yes | no | 0.928 | 0.919 | 0.399 | 0.0 | |
| O09159 | 1013 | Lysosomal alpha-mannosida | yes | no | 0.930 | 0.916 | 0.398 | 0.0 | |
| O46432 | 1007 | Lysosomal alpha-mannosida | N/A | no | 0.916 | 0.907 | 0.395 | 0.0 | |
| O00754 | 1011 | Lysosomal alpha-mannosida | yes | no | 0.917 | 0.905 | 0.394 | 0.0 | |
| Q60HE9 | 1012 | Lysosomal alpha-mannosida | N/A | no | 0.917 | 0.904 | 0.394 | 0.0 | |
| Q29451 | 999 | Lysosomal alpha-mannosida | yes | no | 0.932 | 0.930 | 0.384 | 0.0 | |
| P34098 | 1010 | Lysosomal alpha-mannosida | yes | no | 0.947 | 0.935 | 0.360 | 0.0 | |
| Q28949 | 995 | Epididymis-specific alpha | no | no | 0.881 | 0.883 | 0.278 | 3e-78 | |
| Q8BRK9 | 1152 | Alpha-mannosidase 2x OS=M | no | no | 0.751 | 0.650 | 0.279 | 5e-78 | |
| P49641 | 1150 | Alpha-mannosidase 2x OS=H | no | no | 0.741 | 0.642 | 0.276 | 5e-78 |
| >sp|Q8VHC8|MA2B1_CAVPO Lysosomal alpha-mannosidase OS=Cavia porcellus GN=MAN2B1 PE=1 SV=1 | Back alignment and function desciption |
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Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/1000 (39%), Positives = 558/1000 (55%), Gaps = 74/1000 (7%)
Query: 24 GSDYVKYNTGAGVVAGKLNVHLVAHSHDDVGWLKTVDQYYVGSNNSIQSACVENVLDSVV 83
G+ Y T V G LNVHLVAH+HDDVGWLKTVDQYY G +N +Q A V+ +LDSV+
Sbjct: 44 GARAAGYETCPMVQPGMLNVHLVAHTHDDVGWLKTVDQYYWGIHNDLQQAGVQYILDSVI 103
Query: 84 EALRRDPNRKFVFAEMAFFHRWWVGQSPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHY 143
AL +P R+FV+ EMAFF RWW Q+ E QE VR+LV +LEF NGGW M+DEA THY
Sbjct: 104 SALLAEPTRRFVYVEMAFFSRWWHQQTNETQEVVRRLVRQGRLEFANGGWVMNDEAATHY 163
Query: 144 VDMIDQTTLGHHYIKQHF--NKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFARIDYQ 201
++DQ TLG +++ F + P+ W IDPFGHS QA L ++GFD V F RIDYQ
Sbjct: 164 GAIVDQMTLGLRFLEDTFGSDGRPRVAWHIDPFGHSREQASLFA-QMGFDGVFFGRIDYQ 222
Query: 202 DRAKRKEDKSLEVIWRGSKTF-GSSSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLL 260
D+ RK+ + +E++WR S + ++ +FT P +Y PP G +++ PV D+P
Sbjct: 223 DKLVRKKRREMELVWRASASLKAPAADLFTGVLPNNYGPPEGLCWDVLCADPPVVDDPRS 282
Query: 261 DGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVN---- 316
YN ++ V+ F+ A Q R NH + TMG DFQY+ A +WFK +DKLI VN
Sbjct: 283 PEYNAKKLVSYFLQLATAQGRYYRTNHTVMTMGSDFQYENANTWFKNLDKLIQLVNMQQA 342
Query: 317 KGGRVNALYSTPSLYTEAKNAANGPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRV 376
G RV+ LYSTP+ Y N AN WP+K DD+FPYAD + +WTG+F+SRPALK Y R+
Sbjct: 343 NGSRVHVLYSTPACYLWELNKANLTWPVKEDDFFPYADGPHMFWTGYFSSRPALKRYERL 402
Query: 377 LSGFYLASRQLEFLAGKKSP-GP----TTSALGDALGIAQHHDAVTGTAKQHTTNDYAKR 431
F QLE G + GP +S L A+ + QHHDAV+GT+KQH +DYA++
Sbjct: 403 SYNFLQVCNQLEAQVGPAANVGPYGHGDSSPLNQAMAVLQHHDAVSGTSKQHVADDYARQ 462
Query: 432 LAIGASEAEVVVSSSLSCLASRKSGHQCTKPASTFSQCPLLNISYCPPTEKGIPEGKNLV 491
LA G EV++S++L+ L+ K TF C LNIS CP ++ +
Sbjct: 463 LAAGWGPCEVLLSNALAKLSGSKE---------TFLFCRDLNISICPFSQTS----ERFQ 509
Query: 492 VAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQS 551
V YNPLG ++R+PV ++KDP N + V L +
Sbjct: 510 VLVYNPLGRKVDRMVRLPVRKGLFLIKDPGNNTVPSTVVEL------------------T 551
Query: 552 SKRVPRYWLLFQVTVPPLGWNTYFISRAAGKVKRRKGFFLAADSPQDKTVEVGPGNLKMS 611
S P LLF VP LG++ Y ++R + + + + + + L+ S
Sbjct: 552 SSGNPE--LLFPALVPALGFSVYSVTRVSDQNPQTRSQHSRPQKYSSPVLSIKNEYLRAS 609
Query: 612 FSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMV----DTQSSGAYIFRPNGAQPNVVSRS 667
F TG L + + +P+ Q+F WY + V +Q+SGAYIFRP+ P VS
Sbjct: 610 FHPDTGLLSMIEVLDRKLTLPVNQAFFWYNASVGDKRSSQASGAYIFRPSQQWPFPVSHL 669
Query: 668 VPIKIIRGPMVDEVHQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTA 727
++++ +V EVHQ F +W QV RLY + H E+E+T+GPIP D GKE+ISR
Sbjct: 670 ARTRLVKTALVQEVHQNFTAWCSQVVRLYSGQRHLELEWTVGPIPVGDKWGKEIISRFDT 729
Query: 728 NMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLV 787
+ T VF+TDSNGR+ L+R RDYR W L EPVAGNYYP+N I+ITD K + +VL
Sbjct: 730 PLETGGVFFTDSNGREVLERRRDYRPSWKLNQTEPVAGNYYPVNSRIYITDGKMQLTVLT 789
Query: 788 DRATGGASIKDGQVEIMLH--------RGVGEALDESVCVRDNCEGLTVRGNYYLSVNQL 839
DR+ GG+S+ DG +E+M+H RGVGEAL E G VRG + L ++
Sbjct: 790 DRSQGGSSMSDGSLELMVHRRLLKDDGRGVGEALQEP------GSGGWVRGRHLLLLDTA 843
Query: 840 -GAGARWRRTTGQEVYSPLLLAFTQEKLETWTESHLTKSTAMESDY--SLPLNVALITLE 896
A A R +E+ +P L+ + + H S LP +V L+TL
Sbjct: 844 REAAAEHRLLAEKELLAPQLVLAPGQGPSYHHDHHEAVPRKQFSGLRRQLPPSVRLLTLA 903
Query: 897 ELDDGSVLLRLAHLYEEGEDAE--YSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMK 954
++LLRL H + GED+ S ++L+ +F +I +L+E +L+ANQ +
Sbjct: 904 RWGPDTLLLRLEHQFALGEDSSRNLSLPVTLDLQDLFSTFTITRLQETTLAANQLRASAS 963
Query: 955 KMTWKVEGESGKTHSPVRGGPLDASTLVVELGPMEIRTFL 994
++ W E + + R LD S++ ++ PMEIRTF+
Sbjct: 964 RLKWTTEIDPISRPAVPR---LDPSSITLQ--PMEIRTFV 998
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Necessary for the catabolism of N-linked carbohydrates released during glycoprotein turnover. Cavia porcellus (taxid: 10141) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 4 |
| >sp|O09159|MA2B1_MOUSE Lysosomal alpha-mannosidase OS=Mus musculus GN=Man2b1 PE=2 SV=4 | Back alignment and function description |
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| >sp|O46432|MA2B1_FELCA Lysosomal alpha-mannosidase OS=Felis catus GN=MAN2B1 PE=2 SV=1 | Back alignment and function description |
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| >sp|O00754|MA2B1_HUMAN Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN2B1 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q60HE9|MA2B1_MACFA Lysosomal alpha-mannosidase OS=Macaca fascicularis GN=MAN2B1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q29451|MA2B1_BOVIN Lysosomal alpha-mannosidase OS=Bos taurus GN=MAN2B1 PE=1 SV=3 | Back alignment and function description |
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| >sp|P34098|MANA_DICDI Lysosomal alpha-mannosidase OS=Dictyostelium discoideum GN=manA PE=1 SV=2 | Back alignment and function description |
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| >sp|Q28949|MA2B2_PIG Epididymis-specific alpha-mannosidase OS=Sus scrofa GN=MAN2B2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q8BRK9|MA2A2_MOUSE Alpha-mannosidase 2x OS=Mus musculus GN=Man2a2 PE=2 SV=2 | Back alignment and function description |
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| >sp|P49641|MA2A2_HUMAN Alpha-mannosidase 2x OS=Homo sapiens GN=MAN2A2 PE=2 SV=3 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 997 | ||||||
| 224071325 | 1011 | predicted protein [Populus trichocarpa] | 0.986 | 0.973 | 0.792 | 0.0 | |
| 225431096 | 1006 | PREDICTED: lysosomal alpha-mannosidase [ | 0.991 | 0.983 | 0.764 | 0.0 | |
| 356561136 | 1012 | PREDICTED: lysosomal alpha-mannosidase-l | 0.995 | 0.981 | 0.745 | 0.0 | |
| 357517983 | 1018 | Lysosomal alpha-mannosidase [Medicago tr | 0.992 | 0.972 | 0.749 | 0.0 | |
| 356502776 | 1012 | PREDICTED: lysosomal alpha-mannosidase-l | 0.995 | 0.981 | 0.751 | 0.0 | |
| 356502778 | 1028 | PREDICTED: lysosomal alpha-mannosidase-l | 0.995 | 0.965 | 0.734 | 0.0 | |
| 356495356 | 1004 | PREDICTED: lysosomal alpha-mannosidase-l | 0.983 | 0.977 | 0.744 | 0.0 | |
| 449491456 | 1007 | PREDICTED: lysosomal alpha-mannosidase-l | 0.982 | 0.973 | 0.713 | 0.0 | |
| 449434476 | 1007 | PREDICTED: lysosomal alpha-mannosidase-l | 0.982 | 0.973 | 0.715 | 0.0 | |
| 357145698 | 998 | PREDICTED: lysosomal alpha-mannosidase-l | 0.967 | 0.966 | 0.679 | 0.0 |
| >gi|224071325|ref|XP_002303405.1| predicted protein [Populus trichocarpa] gi|222840837|gb|EEE78384.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 1642 bits (4251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 789/996 (79%), Positives = 857/996 (86%), Gaps = 12/996 (1%)
Query: 11 LLCVLCLCSAVVNGSDYVKYNTGAGVVAGKLNVHLVAHSHDDVGWLKTVDQYYVGSNNSI 70
+ V L VVNG YV YNTG GVV GKLNVHLV HSHDDVGWLKTVDQYYVGSNNSI
Sbjct: 19 FVVVFGLHGTVVNGG-YVDYNTGGGVVPGKLNVHLVPHSHDDVGWLKTVDQYYVGSNNSI 77
Query: 71 QSACVENVLDSVVEALRRDPNRKFVFAEMAFFHRWWVGQSPEIQEQVRKLVDASQLEFVN 130
Q ACVENVLDSVVE+LRRD NRKFVF EMAFF RWWV QS EIQEQVRKLVDA QLEFVN
Sbjct: 78 QGACVENVLDSVVESLRRDSNRKFVFVEMAFFQRWWVEQSEEIQEQVRKLVDAGQLEFVN 137
Query: 131 GGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGF 190
GGWCMHDEAT HY+DMIDQTTLGH IK+ FNKTP+AGWQIDPFGHSAVQAYLLG ELGF
Sbjct: 138 GGWCMHDEATCHYIDMIDQTTLGHRAIKEQFNKTPRAGWQIDPFGHSAVQAYLLGTELGF 197
Query: 191 DSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTDD 250
DSVHFARIDYQDRAKRK+DK+LEVIWRGSKTFGSSSQIF NAFPVHYSPP+GFHFE+ DD
Sbjct: 198 DSVHFARIDYQDRAKRKDDKALEVIWRGSKTFGSSSQIFANAFPVHYSPPNGFHFEVFDD 257
Query: 251 FDPVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDK 310
F PVQDNPLLD YNVEQ VNDFI+AA+TQANVTR NHIMWTMGDDFQYQYAESWFKQMDK
Sbjct: 258 FVPVQDNPLLDDYNVEQRVNDFINAAMTQANVTRTNHIMWTMGDDFQYQYAESWFKQMDK 317
Query: 311 LIHYVNKGGRVNALYSTPSLYTEAKNAANGPWPLKTDDYFPYADRRNAYWTGFFTSRPAL 370
LIHYVNK GRVNALYSTPS+YT+ KNAAN WPLKTDDYFPYAD NAYWTGFFTSRPAL
Sbjct: 318 LIHYVNKDGRVNALYSTPSIYTDVKNAANESWPLKTDDYFPYADTENAYWTGFFTSRPAL 377
Query: 371 KGYVRVLSGFYLASRQLEFLAGKKSPGPTTSALGDALGIAQHHDAVTGTAKQHTTNDYAK 430
K YVR LSG+YLA+RQLEFL GKKS GP T LGDALGIAQHHD VTGTAKQHTTNDY K
Sbjct: 378 KRYVRQLSGYYLAARQLEFLVGKKSTGPNTYRLGDALGIAQHHDGVTGTAKQHTTNDYEK 437
Query: 431 RLAIGASEAEVVVSSSLSCLASRKSGHQCTKPASTFSQCPLLNISYCPPTEKGIPEGKNL 490
RLAIGA EAE VSS+LSCL S KS QC KPA FSQC LLNISYCPPTE+ I GK L
Sbjct: 438 RLAIGALEAEATVSSALSCLVSNKSRDQCAKPALNFSQCQLLNISYCPPTEEAIANGKRL 497
Query: 491 VVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQ 550
V+ YN LGWNRTD+IRIPVND NL+V D G I QYV +DN TSNLR FY +AY G
Sbjct: 498 VMVLYNALGWNRTDVIRIPVNDPNLVVADSYGKHIETQYVTMDNTTSNLRNFYLKAY-GF 556
Query: 551 SSKRVPRYWLLFQVTVPPLGWNTYFISRAAGKVKRRKGFFLAADSPQDKTVEVGPGNLKM 610
S +VPRYWL FQV+VPPLGW+TYFI+RA G KRR G + DSPQ+ T+E+G GNLKM
Sbjct: 557 PSIQVPRYWLHFQVSVPPLGWSTYFIARATGIGKRRNGLSV-MDSPQNDTIEIGSGNLKM 615
Query: 611 SFSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMVD-TQSSGAYIFRPNGAQPNVVSRSVP 669
SFS TGQLKRMYNS+TGVDVPIQQS+ WYGS + QSSGAYI RP+G+ P+VV+RSVP
Sbjct: 616 SFSSMTGQLKRMYNSKTGVDVPIQQSYFWYGSSSELMQSSGAYILRPDGSPPHVVARSVP 675
Query: 670 IKIIRGPMVDEVHQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANM 729
+++ RGP+ DEV QQFNSWIYQVTR+Y D+EHAE+EYTIGPIP EDSVGKEVI+RMTANM
Sbjct: 676 LQVHRGPLFDEVRQQFNSWIYQVTRVYKDQEHAELEYTIGPIPLEDSVGKEVITRMTANM 735
Query: 730 VTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDR 789
TEKVFYTDSNGRDFLKR+RDYRADWSL VNEPVAGNYYPLNLGIF DK+SE SVLVDR
Sbjct: 736 ATEKVFYTDSNGRDFLKRIRDYRADWSLSVNEPVAGNYYPLNLGIFTMDKRSELSVLVDR 795
Query: 790 ATGGASIKDGQVEIMLH--------RGVGEALDESVCVRDNCEGLTVRGNYYLSVNQLGA 841
ATGGASI+DGQ+E+MLH RGV EALDESVC+ D CEGLT+RGNYYLS+NQ+GA
Sbjct: 796 ATGGASIEDGQLELMLHRRTLHDDSRGVNEALDESVCIGDECEGLTIRGNYYLSINQVGA 855
Query: 842 GARWRRTTGQEVYSPLLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLEELDDG 901
GA WRRTTGQE+Y+PLL AFTQEK ET SH+ TAM+ YSLPLNVALITL+ELDDG
Sbjct: 856 GAVWRRTTGQEIYTPLLAAFTQEKEETSKASHVATGTAMDPGYSLPLNVALITLQELDDG 915
Query: 902 SVLLRLAHLYEEGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVE 961
SVLLRLAHLYE GEDA YSTLA VELKKMF GK+IK+LKEMSLS+NQEK EMKKMTWKVE
Sbjct: 916 SVLLRLAHLYEAGEDAAYSTLATVELKKMFSGKAIKELKEMSLSSNQEKSEMKKMTWKVE 975
Query: 962 GESGKTHSPVRGGPLDASTLVVELGPMEIRTFLLKF 997
G++G+ SPVRGGP+D+STLVVELGPMEIRTFLL+F
Sbjct: 976 GDNGEQPSPVRGGPVDSSTLVVELGPMEIRTFLLQF 1011
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225431096|ref|XP_002265360.1| PREDICTED: lysosomal alpha-mannosidase [Vitis vinifera] gi|297734991|emb|CBI17353.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356561136|ref|XP_003548841.1| PREDICTED: lysosomal alpha-mannosidase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357517983|ref|XP_003629280.1| Lysosomal alpha-mannosidase [Medicago truncatula] gi|355523302|gb|AET03756.1| Lysosomal alpha-mannosidase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356502776|ref|XP_003520192.1| PREDICTED: lysosomal alpha-mannosidase-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356502778|ref|XP_003520193.1| PREDICTED: lysosomal alpha-mannosidase-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356495356|ref|XP_003516544.1| PREDICTED: lysosomal alpha-mannosidase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449491456|ref|XP_004158902.1| PREDICTED: lysosomal alpha-mannosidase-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449434476|ref|XP_004135022.1| PREDICTED: lysosomal alpha-mannosidase-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|357145698|ref|XP_003573734.1| PREDICTED: lysosomal alpha-mannosidase-like [Brachypodium distachyon] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 997 | ||||||
| TAIR|locus:2090817 | 1019 | AT3G26720 [Arabidopsis thalian | 0.970 | 0.949 | 0.578 | 0.0 | |
| TAIR|locus:2156857 | 1047 | AT5G66150 [Arabidopsis thalian | 0.645 | 0.615 | 0.685 | 0.0 | |
| TAIR|locus:2159143 | 1024 | AT5G13980 [Arabidopsis thalian | 0.935 | 0.911 | 0.584 | 8.2e-305 | |
| UNIPROTKB|G5E928 | 1010 | MAN2B1 "Mannosidase, alpha, cl | 0.483 | 0.477 | 0.431 | 1.6e-180 | |
| UNIPROTKB|O00754 | 1011 | MAN2B1 "Lysosomal alpha-mannos | 0.483 | 0.476 | 0.431 | 2.7e-180 | |
| UNIPROTKB|F1SEY1 | 1008 | MAN2B1 "Uncharacterized protei | 0.494 | 0.489 | 0.431 | 4.4e-180 | |
| UNIPROTKB|F1PKB2 | 1007 | MAN2B1 "Uncharacterized protei | 0.488 | 0.483 | 0.434 | 1.2e-179 | |
| ZFIN|ZDB-GENE-050327-52 | 982 | man2b1 "mannosidase, alpha, cl | 0.886 | 0.900 | 0.403 | 1.2e-175 | |
| UNIPROTKB|F1MMX7 | 999 | MAN2B1 "Lysosomal alpha-mannos | 0.494 | 0.493 | 0.425 | 8.6e-173 | |
| UNIPROTKB|Q29451 | 999 | MAN2B1 "Lysosomal alpha-mannos | 0.494 | 0.493 | 0.423 | 6e-172 |
| TAIR|locus:2090817 AT3G26720 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3064 (1083.6 bits), Expect = 0., P = 0.
Identities = 571/987 (57%), Positives = 724/987 (73%)
Query: 25 SDYVKYNTGAGVVAGKLNVHLVAHSHDDVGWLKTVDQYYVGSNNSIQSACVENVLDSVVE 84
S+Y++YNT +V K+NVHLV HSHDDVGWLKTVDQYYVGSNNSI+ ACV+NVLDSV+
Sbjct: 22 SEYIEYNTKPRIVPEKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIRGACVQNVLDSVIA 81
Query: 85 ALRRDPNRKFVFAEMAFFHRWWVGQSPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHYV 144
+L D NRKF++ EMAFF RWW QS + +V+KLVD+ QLEF+NGG CMHDEAT HY+
Sbjct: 82 SLLDDENRKFIYVEMAFFQRWWRQQSNAKKVKVKKLVDSGQLEFINGGMCMHDEATPHYI 141
Query: 145 DMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFARIDYQDRA 204
DMIDQTTLGH +IK F + P+ GWQIDPFGHSAVQAYLLG E GFDS+ FARIDYQDRA
Sbjct: 142 DMIDQTTLGHQFIKTEFGQVPRVGWQIDPFGHSAVQAYLLGAEFGFDSLFFARIDYQDRA 201
Query: 205 KRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLLDGYN 264
KR +K+LEVIW+GSK+ GSSSQIFT FP HY PP GF FE+ D P+QD+PLL YN
Sbjct: 202 KRLREKTLEVIWQGSKSLGSSSQIFTGVFPRHYDPPEGFTFEINDVSAPIQDDPLLFDYN 261
Query: 265 VEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKGGRVNAL 324
V++ VNDF+ AAL Q NVTR NHIMW MG DF+YQYA SWF+Q+DK IHYVNK GR+N L
Sbjct: 262 VQERVNDFVAAALAQVNVTRTNHIMWLMGTDFRYQYAYSWFRQIDKFIHYVNKDGRLNVL 321
Query: 325 YSTPSLYTEAKNAANGPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLAS 384
YSTPS+YT+AK AAN WPLKTDD+FPYAD+ NAYWTG+FTSRPA K YVR LSG+YLA+
Sbjct: 322 YSTPSIYTDAKYAANESWPLKTDDFFPYADKPNAYWTGYFTSRPAFKKYVRDLSGYYLAA 381
Query: 385 RQLEFLAGKKSPGPTTSALGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGXXXXXXXXX 444
RQLEFL G+ S GPTT L DAL IAQHHDAV+GT +QH DYA RL++G
Sbjct: 382 RQLEFLRGRDSSGPTTDMLADALAIAQHHDAVSGTQRQHVAADYALRLSMGYLQAEKLVA 441
Query: 445 XXXXXXXXRKSGHQCTKPASTFSQCPLLNISYCPPTEKGIPEGKNLVVAAYNPLGWNRTD 504
KS + P + F QCPLLNISYCP +E + GK+LVV YN LGW R +
Sbjct: 442 SSLSFLSAAKSSTEKKNPGTKFQQCPLLNISYCPASEARLLSGKSLVVVVYNSLGWKREE 501
Query: 505 IIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQSSKRVPRYWLLFQV 564
++R+PV+ N+IVKD G + Q + L + +R Y +AYLG+S + ++ L F
Sbjct: 502 VVRVPVSSENVIVKDASGKEVVFQLLPLSEIALRIRNEYVKAYLGRSPRDTAKHVLAFTA 561
Query: 565 TVPPLGWNTYFISRAAGKVKRRKGFFLAADSPQDKTVEVGPGNLKMSFSRTTGQLKRMYN 624
+VPPLG+++Y IS G+ R ++ VEVG GNLK+ +S ++ R +
Sbjct: 562 SVPPLGFSSYVISDT-GRTARGLSASYVTSGSMNQNVEVGQGNLKLRYSEEGVKITRHLS 620
Query: 625 SRTGVDVPIQQSFLWY----GSMVDTQSSGAYIFRPNGAQPNVVSRSVPIKIIRGPMVDE 680
++ V +QS+ +Y G+ D Q+SGAY+FRP+G P + I++GP+ DE
Sbjct: 621 TKN--QVTAEQSYAYYIGSNGTDKDPQASGAYVFRPDGVLPIKSKEEAQLTIVQGPLFDE 678
Query: 681 VHQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSN 740
VHQ+ NSWI Q+TR+Y K HAE+E+TIGPIP +D + KE+I+++T M T FYTDSN
Sbjct: 679 VHQELNSWISQITRVYKGKNHAEIEFTIGPIPADDGISKEIITKLTTTMKTNGTFYTDSN 738
Query: 741 GRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQ 800
GRDF+KR+RD+R DW LQV +PVAGNYYPLNLGI++ DK SE SVLVDRA GG+S+++GQ
Sbjct: 739 GRDFIKRIRDFRTDWDLQVYQPVAGNYYPLNLGIYMQDKTSELSVLVDRAVGGSSLENGQ 798
Query: 801 VEIMLHR--------GVGEALDESVCVRDNCEGLTVRGNYYLSVNQLGAGARWRRTTGQE 852
+E+MLHR GVGE L+E+VC+ + C+GLT++G +Y+ +++ G GA+WRRT GQE
Sbjct: 799 IELMLHRRMQHDDIRGVGEILNETVCLPEGCKGLTIQGKFYVQIDKPGDGAKWRRTFGQE 858
Query: 853 VYSPLLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLEELDDGSVLLRLAHLYE 912
+YSPLL+AFT+++ ++W SH T +A E YSLP NVAL+TL+EL++G VLLRLAHL+E
Sbjct: 859 IYSPLLIAFTEQEGDSWINSHKTTFSAFEPSYSLPKNVALLTLQELENGEVLLRLAHLFE 918
Query: 913 EGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKK--MTWKVEGESGKTHSP 970
GED+EYS +AKVELKK+F K I+++KE SLS NQEK EM+K + WKVEG +G+
Sbjct: 919 VGEDSEYSVMAKVELKKLFHNKKIREVKETSLSGNQEKAEMEKRRLIWKVEGSAGEEVK- 977
Query: 971 VRGGPLDASTLVVELGPMEIRTFLLKF 997
RG +DA LVVEL PMEIRT L+KF
Sbjct: 978 -RGEAVDAEKLVVELVPMEIRTLLIKF 1003
|
|
| TAIR|locus:2156857 AT5G66150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2159143 AT5G13980 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G5E928 MAN2B1 "Mannosidase, alpha, class 2B, member 1, isoform CRA_a" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|O00754 MAN2B1 "Lysosomal alpha-mannosidase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1SEY1 MAN2B1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PKB2 MAN2B1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-050327-52 man2b1 "mannosidase, alpha, class 2B, member 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MMX7 MAN2B1 "Lysosomal alpha-mannosidase D peptide" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q29451 MAN2B1 "Lysosomal alpha-mannosidase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8VHC8 | MA2B1_CAVPO | 3, ., 2, ., 1, ., 2, 4 | 0.399 | 0.9287 | 0.9195 | yes | no |
| P34098 | MANA_DICDI | 3, ., 2, ., 1, ., 2, 4 | 0.3602 | 0.9478 | 0.9356 | yes | no |
| Q29451 | MA2B1_BOVIN | 3, ., 2, ., 1, ., 2, 4 | 0.3841 | 0.9327 | 0.9309 | yes | no |
| O00754 | MA2B1_HUMAN | 3, ., 2, ., 1, ., 2, 4 | 0.394 | 0.9177 | 0.9050 | yes | no |
| O09159 | MA2B1_MOUSE | 3, ., 2, ., 1, ., 2, 4 | 0.398 | 0.9307 | 0.9160 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.2.1 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
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 |
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 | fgenesh4_pg.C_LG_III000676 | hypothetical protein (1011 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 997 | |||
| cd10810 | 278 | cd10810, GH38N_AMII_LAM_like, N-terminal catalytic | 1e-174 | |
| cd00451 | 258 | cd00451, GH38N_AMII_euk, N-terminal catalytic doma | 1e-111 | |
| PLN02701 | 1050 | PLN02701, PLN02701, alpha-mannosidase | 1e-110 | |
| pfam01074 | 269 | pfam01074, Glyco_hydro_38, Glycosyl hydrolases fam | 8e-96 | |
| cd10809 | 340 | cd10809, GH38N_AMII_GMII_SfManIII_like, N-terminal | 4e-79 | |
| cd11666 | 344 | cd11666, GH38N_Man2A1, N-terminal catalytic domain | 3e-55 | |
| cd11667 | 344 | cd11667, GH38N_Man2A2, N-terminal catalytic domain | 5e-55 | |
| cd10811 | 326 | cd10811, GH38N_AMII_Epman_like, N-terminal catalyt | 5e-54 | |
| cd10786 | 251 | cd10786, GH38N_AMII_like, N-terminal catalytic dom | 6e-51 | |
| pfam07748 | 379 | pfam07748, Glyco_hydro_38C, Glycosyl hydrolases fa | 1e-45 | |
| smart00872 | 79 | smart00872, Alpha-mann_mid, Alpha mannosidase, mid | 3e-22 | |
| pfam09261 | 82 | pfam09261, Alpha-mann_mid, Alpha mannosidase, midd | 3e-20 | |
| cd10789 | 252 | cd10789, GH38N_AMII_ER_cytosolic, N-terminal catal | 3e-10 | |
| cd10785 | 203 | cd10785, GH38-57_N_LamB_YdjC_SF, Catalytic domain | 1e-09 | |
| cd10812 | 258 | cd10812, GH38N_AMII_ScAms1_like, N-terminal cataly | 1e-06 | |
| cd10813 | 252 | cd10813, GH38N_AMII_Man2C1, N-terminal catalytic d | 7e-05 | |
| cd10814 | 271 | cd10814, GH38N_AMII_SpGH38_like, N-terminal cataly | 3e-04 | |
| cd10791 | 254 | cd10791, GH38N_AMII_like_1, N-terminal catalytic d | 0.001 | |
| cd10793 | 279 | cd10793, GH57N_TLGT_like, N-terminal catalytic dom | 0.001 |
| >gnl|CDD|212121 cd10810, GH38N_AMII_LAM_like, N-terminal catalytic domain of lysosomal alpha-mannosidase and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
Score = 506 bits (1306), Expect = e-174
Identities = 165/279 (59%), Positives = 207/279 (74%), Gaps = 3/279 (1%)
Query: 41 LNVHLVAHSHDDVGWLKTVDQYYVGSNNSIQSACVENVLDSVVEALRRDPNRKFVFAEMA 100
LNVHLV H+HDDVGWLKTVDQYY GSNNSIQ A V+ +LDSV+E L ++P+RKF++ E+A
Sbjct: 1 LNVHLVPHTHDDVGWLKTVDQYYYGSNNSIQHAGVQYILDSVIEELLKNPDRKFIYVEIA 60
Query: 101 FFHRWWVGQSPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHHYIKQH 160
FF RWW QS + +++V+KLV QLEF+NGGWCM+DEATTHY D+IDQ TLGH ++K
Sbjct: 61 FFSRWWREQSEDTRQKVKKLVKNGQLEFINGGWCMNDEATTHYEDIIDQMTLGHQFLKDT 120
Query: 161 FNK--TPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFARIDYQDRAKRKEDKSLEVIWRG 218
F + P+ GWQIDPFGHS QA L ++GFD + F RIDYQD+A+R ++K +E IWRG
Sbjct: 121 FGECARPRVGWQIDPFGHSRTQASLFA-QMGFDGLFFGRIDYQDKAQRLKNKEMEFIWRG 179
Query: 219 SKTFGSSSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLLDGYNVEQWVNDFIDAALT 278
S + G + IFT HY PP GF F++ +P+QD+P L+ YNV++ V+DF+ A
Sbjct: 180 SPSLGPDADIFTGVLYNHYGPPPGFCFDILCGDEPIQDDPNLEDYNVDERVDDFVQYAKE 239
Query: 279 QANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNK 317
QA R NHIM TMG DFQYQ AE WFK MDKLI YVNK
Sbjct: 240 QAQHYRTNHIMLTMGSDFQYQNAEMWFKNMDKLIKYVNK 278
|
The subfamily is represented by lysosomal alpha-mannosidase (LAM, Man2B1, EC 3.2.1.114), which is a broad specificity exoglycosidase hydrolyzing all known alpha 1,2-, alpha 1,3-, and alpha 1,6-mannosidic linkages from numerous high mannose type oligosaccharides. LAM is expressed in all tissues and in many species. In mammals, the absence of LAM can cause the autosomal recessive disease alpha-mannosidosis. LAM has an acidic pH optimum at 4.0-4.5. It is stimulated by zinc ion and is inhibited by cobalt ion and plant alkaloids, such as swainsonine (SW). LAM catalyzes hydrolysis by a double displacement mechanism in which a glycosyl-enzyme intermediate is formed and hydrolyzed via oxacarbenium ion-like transition states. A carboxylic acid in the active site acts as the catalytic nucleophile in the formation of the covalent intermediate while a second carboxylic acid acts as a general acid catalyst. The same residue is thought to assist in the hydrolysis (deglycosylation) step, this time acting as a general base. Length = 278 |
| >gnl|CDD|212095 cd00451, GH38N_AMII_euk, N-terminal catalytic domain of eukaryotic class II alpha-mannosidases; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|178304 PLN02701, PLN02701, alpha-mannosidase | Back alignment and domain information |
|---|
| >gnl|CDD|216284 pfam01074, Glyco_hydro_38, Glycosyl hydrolases family 38 N-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|212120 cd10809, GH38N_AMII_GMII_SfManIII_like, N-terminal catalytic domain of Golgi alpha-mannosidase II, Spodoptera frugiperda Sf9 alpha-mannosidase III, and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212131 cd11666, GH38N_Man2A1, N-terminal catalytic domain of Golgi alpha-mannosidase II and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212132 cd11667, GH38N_Man2A2, N-terminal catalytic domain of Golgi alpha-mannosidase IIx, and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212122 cd10811, GH38N_AMII_Epman_like, N-terminal catalytic domain of mammalian core-specific lysosomal alpha 1,6-mannosidase and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212098 cd10786, GH38N_AMII_like, N-terminal catalytic domain of class II alpha-mannosidases and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|219551 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases family 38 C-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|214875 smart00872, Alpha-mann_mid, Alpha mannosidase, middle domain | Back alignment and domain information |
|---|
| >gnl|CDD|220157 pfam09261, Alpha-mann_mid, Alpha mannosidase, middle domain | Back alignment and domain information |
|---|
| >gnl|CDD|212101 cd10789, GH38N_AMII_ER_cytosolic, N-terminal catalytic domain of endoplasmic reticulum(ER)/cytosolic class II alpha-mannosidases; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212097 cd10785, GH38-57_N_LamB_YdjC_SF, Catalytic domain of glycoside hydrolase (GH) families 38 and 57, lactam utilization protein LamB/YcsF family proteins, YdjC-family proteins, and similar proteins | Back alignment and domain information |
|---|
| >gnl|CDD|212123 cd10812, GH38N_AMII_ScAms1_like, N-terminal catalytic domain of yeast vacuolar alpha-mannosidases and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212124 cd10813, GH38N_AMII_Man2C1, N-terminal catalytic domain of mammalian cytosolic alpha-mannosidase Man2C1 and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212125 cd10814, GH38N_AMII_SpGH38_like, N-terminal catalytic domain of SPGH38, a putative alpha-mannosidase of Streptococcus pyogenes, and its prokaryotic homologs; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212103 cd10791, GH38N_AMII_like_1, N-terminal catalytic domain of mainly uncharacterized eukaryotic proteins similar to alpha-mannosidases; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212105 cd10793, GH57N_TLGT_like, N-terminal catalytic domain of 4-alpha-glucanotransferase; glycoside hydrolase family 57 (GH57) | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 997 | |||
| KOG1959 | 996 | consensus Glycosyl hydrolase, family 38 - alpha-ma | 100.0 | |
| PLN02701 | 1050 | alpha-mannosidase | 100.0 | |
| KOG1958 | 1129 | consensus Glycosyl hydrolase, family 38 - alpha-ma | 100.0 | |
| PRK09819 | 875 | alpha-mannosidase; Provisional | 100.0 | |
| KOG4342 | 1078 | consensus Alpha-mannosidase [Carbohydrate transpor | 100.0 | |
| PF01074 | 275 | Glyco_hydro_38: Glycosyl hydrolases family 38 N-te | 100.0 | |
| COG0383 | 943 | AMS1 Alpha-mannosidase [Carbohydrate transport and | 100.0 | |
| PF07748 | 457 | Glyco_hydro_38C: Glycosyl hydrolases family 38 C-t | 100.0 | |
| PF09261 | 80 | Alpha-mann_mid: Alpha mannosidase, middle domain; | 99.81 | |
| smart00872 | 79 | Alpha-mann_mid Alpha mannosidase, middle domain. M | 99.79 | |
| COG0383 | 943 | AMS1 Alpha-mannosidase [Carbohydrate transport and | 99.77 | |
| PF03065 | 360 | Glyco_hydro_57: Glycosyl hydrolase family 57; Inte | 98.35 | |
| COG1543 | 504 | Uncharacterized conserved protein [Function unknow | 96.22 | |
| PF01522 | 123 | Polysacc_deac_1: Polysaccharide deacetylase; Inter | 95.62 | |
| COG1449 | 615 | Alpha-amylase/alpha-mannosidase [Carbohydrate tran | 94.7 | |
| TIGR03212 | 297 | uraD_N-term-dom putative urate catabolism protein. | 94.12 | |
| TIGR02764 | 191 | spore_ybaN_pdaB polysaccharide deacetylase family | 94.03 | |
| PRK14582 | 671 | pgaB outer membrane N-deacetylase; Provisional | 93.67 | |
| TIGR02884 | 224 | spore_pdaA delta-lactam-biosynthetic de-N-acetylas | 92.83 | |
| TIGR03006 | 265 | pepcterm_polyde polysaccharide deactylase family p | 90.76 | |
| TIGR02873 | 268 | spore_ylxY probable sporulation protein, polysacch | 89.81 | |
| PRK14581 | 672 | hmsF outer membrane N-deacetylase; Provisional | 85.75 |
| >KOG1959 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-227 Score=1896.33 Aligned_cols=943 Identities=50% Similarity=0.835 Sum_probs=859.6
Q ss_pred eecCCCCccCCceEEEEEeccccCCCchhhHHhhhccCCccchhhhHHHHHHHHHHHHHcCCCCcEEEechHHHHHHHhh
Q 001910 29 KYNTGAGVVAGKLNVHLVAHSHDDVGWLKTVDQYYVGSNNSIQSACVENVLDSVVEALRRDPNRKFVFAEMAFFHRWWVG 108 (997)
Q Consensus 29 ~~~~~~~~~~~~~~VhlvpHSH~D~gWl~t~~ey~~g~~~~~~~~~v~~il~~vl~~L~~~p~~kF~~~e~~~~~~w~~~ 108 (997)
+|++|+...+++++||||||||+|+|||||+||||+|++|.||++.|++|||+||++|.+||+|||+++|++||.+||.+
T Consensus 25 ~y~t~~~~~~~~invHlVPHSHDDVGWLKTVDQyy~G~~n~Iq~AgVqyIldSVV~eLl~dp~RRFI~VE~aFF~rWW~~ 104 (996)
T KOG1959|consen 25 GYNTCHKVVPNMINVHLVPHSHDDVGWLKTVDQYYYGSKNKIQHAGVQYILDSVVEELLKDPNRRFIYVETAFFARWWNE 104 (996)
T ss_pred ccCCCccccCceeEEEecCCccCccceeeeehhheecCCcccchhhHHHHHHHHHHHHhcCCccceehhhHHHHHHHHHh
Confidence 39999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChHHHHHHHHHHHcCCeEEEceeeeeecccCCChHHHHHHHHHHHHHHHHHcC--CCCceeeecCCCCCChhhHHHHhh
Q 001910 109 QSPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFN--KTPKAGWQIDPFGHSAVQAYLLGV 186 (997)
Q Consensus 109 ~~p~~~~~vk~lV~~GrlE~v~GgWv~~Dea~~~~es~I~ql~~G~~~l~~~fG--~~p~v~w~iD~FGhs~~~p~ll~~ 186 (997)
|++++|+.||+||++|||||+||||||+|||++||.|+||||+.||+||.++|| .+|++||||||||||+.+|+||+
T Consensus 105 qS~~~k~~Vk~LV~~GrLEFi~Ggw~MnDEA~~hY~dvIDQ~TlGlrfL~~tFG~cgrPrvgWqIDPFGHSreqAslfA- 183 (996)
T KOG1959|consen 105 QSETQKEQVKKLVNEGRLEFIGGGWSMNDEATTHYQDVIDQFTLGLRFLKDTFGECGRPRVGWQIDPFGHSREQASLFA- 183 (996)
T ss_pred cCHHHHHHHHHHHhcCCEEEecCeeeecchhhhhHHHHHHHHHHHHHHHHHHhcccCCcceeeeeCCCCcchHHHHHHH-
Confidence 999999999999999999999999999999999999999999999999999999 79999999999999999999996
Q ss_pred hcCCcEEEEeccChHHHHhhhccCCeeEEEecCCCCCCCCceEEeecCCCCCCCCCCCcccCCCCCCccCCCCCCcccHH
Q 001910 187 ELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVHYSPPSGFHFELTDDFDPVQDNPLLDGYNVE 266 (997)
Q Consensus 187 ~~G~~~~~~~Ri~~~~~~~~~~~~~~eF~W~g~d~~~~gs~I~t~~~~~~Y~~p~~f~f~~~~~~~p~~~~~~~~~~nv~ 266 (997)
+||||+.+|+||||+||+.|..++.|||+|+|++++++.++|||++|+.||++|.|||||..|.+.|++|++.+.++||+
T Consensus 184 qmGfd~~fFaRiDy~dK~~R~~~~~lE~iW~~S~sL~~~~~iFTg~l~n~Y~~P~gfc~dv~c~d~Pi~D~~~~~d~NVk 263 (996)
T KOG1959|consen 184 QMGFDGVFFARIDYQDKAKRMKEKTLEMIWRGSESLGSSSQIFTGALYNHYSPPPGFCFDVLCGDDPIIDGPRSYDYNVK 263 (996)
T ss_pred HhCccchheeecchhhHHHHHhhccceEEeecCccccchhhhhhhccccCCCCCCCceeccccCCCCCCCCCCCCCccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccCCCeEEEeecCCCCccchHHHHHHHHHHHHHHhc---CC-ceeEEEcChhhHHHHHHhcCCCC
Q 001910 267 QWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNK---GG-RVNALYSTPSLYTEAKNAANGPW 342 (997)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~~~~a~~~~~~~~~li~~~N~---~~-~~~i~~sT~~~Yf~~v~~~~~~~ 342 (997)
+|++.|++..+.++.+|+|||||+|||+||+|.+|..||+||||||+|+|+ .+ .+++.||||+||++++++.+..|
T Consensus 264 erVd~Fv~~a~~~a~~~RtnHim~~MG~DFqY~~A~v~fknmDkLI~yVN~~qa~gs~vnv~YSTpscYl~alh~~~~Tw 343 (996)
T KOG1959|consen 264 ERVDDFVAYAKNQAAYYRTNHIMWPMGDDFQYENANVWFKNMDKLIKYVNERQADGSKVNVFYSTPSCYLNALHAANQTW 343 (996)
T ss_pred HHHHHHHHHHHHhHhheecceEEEeccCCceehhhhHHHhhHHHHHHHhhhhhcCCceEEEEEcChHHHHHHHHHhcCcc
Confidence 999999999999999999999999999999999999999999999999994 34 89999999999999999999999
Q ss_pred CCccCCCccccccCCCcceeeeecccchhhHHHHhhhHHHHHHHHHHhhCCCC--CCCchHHHHHHHHhhccccCCCCCC
Q 001910 343 PLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGKKS--PGPTTSALGDALGIAQHHDAVTGTA 420 (997)
Q Consensus 343 p~~~gDf~py~~~~~~yWtG~yTSrp~~K~~~R~~e~~L~~ae~l~~l~~~~~--~~~~~~~l~~~l~~~QhHDaItGTs 420 (997)
|+++.|||||++++|.||||||||||.+|++.|+++++|++|+||+++++... ..+.++.|+++|++.|||||||||+
T Consensus 344 p~Kt~DFFPYa~~~~syWTGyFTSRPa~Kr~~R~~s~~lq~akQL~~la~l~~~~~~~dl~~Lream~i~QHHDAVTGTe 423 (996)
T KOG1959|consen 344 PVKTDDFFPYASEPHSYWTGYFTSRPALKRFERDGSHYLQVAKQLSVLAGLSSTEQGPDLDYLREAMAIMQHHDAVTGTE 423 (996)
T ss_pred cccccccCcCCCCCCcceeeeccccHHHHHHHhhhhHHHHHHHHHhhhcCCCccccCccHHHHHHHHHHHhhcccccccc
Confidence 99999999999999999999999999999999999999999999999987654 5678999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCCCCCCCcccccccccccCCCCCCCCCCCCeEEEEEEcCCCc
Q 001910 421 KQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPASTFSQCPLLNISYCPPTEKGIPEGKNLVVAAYNPLGW 500 (997)
Q Consensus 421 ~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~ln~s~~~~~~~~~~~~~~~~v~v~Npl~~ 500 (997)
|++|.+||.++|..|+..|+.+++.+|+.|.... ..+|++|++||+|+||.+++ .++.+.|++||||+|
T Consensus 424 kq~Va~DY~r~La~g~~~~e~~~~~aL~~lt~~~--------~~~f~~C~~lNiS~C~~t~~---~~~~~~v~~YNpLa~ 492 (996)
T KOG1959|consen 424 KQHVADDYARRLADGILGAEKLARDALRKLTNLP--------NGEFQSCLLLNISECAFTKD---GADNFIVTLYNPLAH 492 (996)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC--------CccchhhhhhccccCCCCcC---CcCcEEEEEEcCCcc
Confidence 9999999999999999999999999999998753 34789999999999999863 367799999999999
Q ss_pred ceeEEEEEEEcCCcEEEEcCCCCeeeEEEeeccccccccchhhhhhccCCCCCCCCcEEEEEEEeeCCCceEEEEEEecC
Q 001910 501 NRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQSSKRVPRYWLLFQVTVPPLGWNTYFISRAA 580 (997)
Q Consensus 501 ~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vP~lG~~~y~i~~~~ 580 (997)
.++++|+|||..+++.|+|+.|++|++|++|.......+. .......++|+|.|.|||+|+++|.|+...
T Consensus 493 ~~t~~VRiPV~~~~~~V~D~~G~~v~Sqivp~~~~~~al~----------~~~~~~~~eLvf~asvpplg~aty~i~k~~ 562 (996)
T KOG1959|consen 493 TVTQYVRIPVKEENYRVTDEKGRTVPSQIVPVPWQVLALE----------SRNNDTKHELVFKASVPPLGIATYFIKKVA 562 (996)
T ss_pred eeeeEEEEeccCCCeEEECCCCCCcccceeccchhhhhhh----------ccccCCCceEEEEEEecCccceEEEEeecC
Confidence 9999999999999999999999999999999975543331 112335689999999999999999999655
Q ss_pred CccccccccccccCCCCCCceEecCCeEEEEEEcCCCcEEEEEecCCceeeeeeeEEEEeeccc---CCCCCCcceEccC
Q 001910 581 GKVKRRKGFFLAADSPQDKTVEVGPGNLKMSFSRTTGQLKRMYNSRTGVDVPIQQSFLWYGSMV---DTQSSGAYIFRPN 657 (997)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~ieN~~~~v~~d~~~G~l~si~dk~~g~~~~~~~~f~~Y~~~~---~~~~sgAY~F~P~ 657 (997)
.....+.+............+.|+|+++++.||.++|.+++|....+|++..+.|.|.+|.++. +.+.||||+|+|
T Consensus 563 ~~~~~~~~~~~~i~~~~~n~~~V~n~~~kl~fd~~tG~l~~v~~n~t~~t~~V~Q~f~~Y~~~~g~n~~q~SgAYiFRp- 641 (996)
T KOG1959|consen 563 STERGSASHVRNIKKRESNATEVGNSHLKLVFDNDTGLLKTVEMNQTGVTENVDQEFGYYKGYRGDNDKQASGAYIFRP- 641 (996)
T ss_pred cccccccccccccccccCcceEeccceEEEEEcCCCCceEEEEecccCcceeeeeeeEEEEeecCCcCCccCcceEecC-
Confidence 4332111111111123334489999999999998899999999888999999999999998765 247899999999
Q ss_pred CCcccccC-CCccEEEEecCceEEEEEEecceEEEEEEEeecCCceeEEEEECCeeccCCCCcEEEEEEEeeccCCcEEE
Q 001910 658 GAQPNVVS-RSVPIKIIRGPMVDEVHQQFNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFY 736 (997)
Q Consensus 658 ~~~~~~~~-~~~~i~i~~Gpl~~~v~~~~~~~i~q~vrLy~~~~~ie~e~~v~~ip~~d~~~~e~~~rf~t~i~s~~~fy 736 (997)
+..++++. ...+++|+.|||+.||++.++.|++|.+|+|+|.+++|+||.|||||++|..|||++.||+|+|.|++.||
T Consensus 642 ~~~~~~~~~~~vel~vv~G~LV~EVhQ~f~~wiSQviRvy~g~~~~E~Ew~VGpIp~~d~~gkEvVtr~~t~i~S~g~fY 721 (996)
T KOG1959|consen 642 GQADIPIVSDQVELTVVDGPLVKEVHQQFNPWISQVIRVYEGKNHVEFEWLVGPIPIDDGIGKEVVTRFSTEISSNGVFY 721 (996)
T ss_pred CCCCccccccceEEEEecCchHHHHHHHHHHHHhheeEecCCCcceEEEEEecceecCCCccceEEEEeccccccCceEE
Confidence 44334433 35788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCccccccccccccccccCCCCCcccceEeeceeEEEeeCCceEEEEeCCCceeeeccCcEEEEEEec--------C
Q 001910 737 TDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHR--------G 808 (997)
Q Consensus 737 tDsnG~~~ikR~~~~r~~w~~~~~~pv~~NyYP~~s~~~I~D~~~~ltvltdr~~G~~s~~~G~ielmL~R--------G 808 (997)
|||||+||+||.+++|++|....++|++||||||++.+||+|++.+|+|||||+|||+|++||+||||||| |
T Consensus 722 TDSNGRe~~kR~~d~r~~~~~~~~epiAGNYYPvt~~i~lqD~~~rl~vL~DRAqGgsSl~dG~lElMLHRRl~~DD~~G 801 (996)
T KOG1959|consen 722 TDSNGREMIKRVRDKREDFVLDVNEPIAGNYYPVTSRIYLQDSKKRLSVLNDRAQGGSSLKDGQLELMLHRRLLNDDGRG 801 (996)
T ss_pred ecCcHHHHHHHHhcccCCCccccCccccccccccceeeEEecCCceEEEEeecccCCccccCCeEEEEeeehhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred CCCccccccccccCCCCceEeeeEEEeccccCccc-hhcccchhhhcccceeeeeccccccccccccCccccCccCCCCC
Q 001910 809 VGEALDESVCVRDNCEGLTVRGNYYLSVNQLGAGA-RWRRTTGQEVYSPLLLAFTQEKLETWTESHLTKSTAMESDYSLP 887 (997)
Q Consensus 809 vge~l~e~~~~~~~~~gl~~~g~~~l~l~~~~~~~-~~~r~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~s~l~~~~~lp 887 (997)
|||+|||+.++ ..||++||+|++.|+....++ ..+|..++++..|.+.+|++.....+........+.+..++.||
T Consensus 802 v~EaLnEt~~~---~~gL~~rGk~~~~l~~~~d~a~~~~r~~~~ei~~P~~~~f~~~~~~~~~~~~s~~~~~f~~~~~lP 878 (996)
T KOG1959|consen 802 VGEALNETVYG---HAGLIARGKLYVLLDKAGDGATGWRRLAEQEIHLPLWKFFSKPEGGEALNSLSIPGSAFSGSYDLP 878 (996)
T ss_pred cchhccccccc---ccceEEeeeEEEEEecccccchhhhhhhhhhcccHHHHHhhcCCCccchhhcCCCccccccccCCC
Confidence 99999999885 279999999999999888775 67788899999999999987655444333333333344456899
Q ss_pred CcceEEEeeecCCCcEEEEEecccccCCCCCcceeeEeehhhhcCcCccceeeecccccccchhhccceeeeee-CCC--
Q 001910 888 LNVALITLEELDDGSVLLRLAHLYEEGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVE-GES-- 964 (997)
Q Consensus 888 ~nv~lltl~~~~~~~illRl~~~~~~~~~~~~s~~~~v~l~~lf~~~~v~~~~E~sLt~~~~~~~~~~~~w~~~-~~~-- 964 (997)
.||||+||++|+++.+||||+|+|++|||+++|++++|||.+||..+++..++||||+||+++++|+|++|..+ .+.
T Consensus 879 ~~vhLlTLe~~~~~~vLlRleh~~e~gED~~~s~vvsfnl~~lf~~~~i~~i~EttL~gN~~ls~mkr~k~~~~~~G~~~ 958 (996)
T KOG1959|consen 879 QSVHLLTLEEWSKDEVLLRLEHLYEVGEDSELSQVVSFNLRKLFSALDIVEIRETTLDGNQPLSDMKRFKFHWDVSGEKP 958 (996)
T ss_pred cceeeeecccCCCCceEeeehhhhhcccccccCcceEEEhHHhhcccCeeEEEEeeccCccChhhhhhhccccCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888776 331
Q ss_pred -CCcCCCCCCCCCCC-CCceEEecCCceeEEEEEC
Q 001910 965 -GKTHSPVRGGPLDA-STLVVELGPMEIRTFLLKF 997 (997)
Q Consensus 965 -~~~~~~~~~~~~~~-~~~~v~l~P~eIrTf~i~~ 997 (997)
.....+.+..|+++ +.+.|+|.|||||||+|++
T Consensus 959 ~~~~~~~s~~~p~~~~~~~~vtL~PmeIRTfii~~ 993 (996)
T KOG1959|consen 959 SGVEYSTSRHKPLDKTSEFIVTLHPMEIRTFIIKF 993 (996)
T ss_pred CCccccccCCCCCCcccceEEEEeccEEEEEEEEE
Confidence 12333445566654 6789999999999999974
|
|
| >PLN02701 alpha-mannosidase | Back alignment and domain information |
|---|
| >KOG1958 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK09819 alpha-mannosidase; Provisional | Back alignment and domain information |
|---|
| >KOG4342 consensus Alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF01074 Glyco_hydro_38: Glycosyl hydrolases family 38 N-terminal domain; InterPro: IPR000602 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF09261 Alpha-mann_mid: Alpha mannosidase, middle domain; InterPro: IPR015341 Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold | Back alignment and domain information |
|---|
| >smart00872 Alpha-mann_mid Alpha mannosidase, middle domain | Back alignment and domain information |
|---|
| >COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF03065 Glyco_hydro_57: Glycosyl hydrolase family 57; InterPro: IPR004300 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >COG1543 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF01522 Polysacc_deac_1: Polysaccharide deacetylase; InterPro: IPR002509 This domain is found in polysaccharide deacetylase | Back alignment and domain information |
|---|
| >COG1449 Alpha-amylase/alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR03212 uraD_N-term-dom putative urate catabolism protein | Back alignment and domain information |
|---|
| >TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB | Back alignment and domain information |
|---|
| >PRK14582 pgaB outer membrane N-deacetylase; Provisional | Back alignment and domain information |
|---|
| >TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase | Back alignment and domain information |
|---|
| >TIGR03006 pepcterm_polyde polysaccharide deactylase family protein, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family | Back alignment and domain information |
|---|
| >PRK14581 hmsF outer membrane N-deacetylase; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 997 | ||||
| 1o7d_A | 298 | The Structure Of The Bovine Lysosomal A-Mannosidase | 3e-73 | ||
| 1hxk_A | 1015 | Golgi Alpha-Mannosidase Ii In Complex With Deoxyman | 2e-72 | ||
| 1ps3_A | 1045 | Golgi Alpha-mannosidase Ii In Complex With Kifunens | 3e-72 | ||
| 1qwn_A | 1045 | Golgi Alpha-Mannosidase Ii Covalent Intermediate Co | 3e-72 | ||
| 3dx3_A | 1045 | Golgi Alpha-Mannosidase Ii In Complex With Mannosta | 4e-72 | ||
| 1qwu_A | 1045 | Golgi Alpha-Mannosidase Ii D341n Mutant Complex Wit | 1e-71 | ||
| 3cv5_A | 1045 | Golgi Mannosidase Ii D204a Catalytic Nucleophile Mu | 2e-71 | ||
| 1hty_A | 1015 | Golgi Alpha-Mannosidase Ii Length = 1015 | 6e-69 | ||
| 1o7d_D | 282 | The Structure Of The Bovine Lysosomal A-Mannosidase | 2e-54 | ||
| 1o7d_B | 84 | The Structure Of The Bovine Lysosomal A-Mannosidase | 8e-15 | ||
| 1o7d_C | 159 | The Structure Of The Bovine Lysosomal A-Mannosidase | 8e-14 | ||
| 1o7d_E | 126 | The Structure Of The Bovine Lysosomal A-Mannosidase | 1e-09 |
| >pdb|1O7D|A Chain A, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 298 | Back alignment and structure |
|
| >pdb|1HXK|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin Length = 1015 | Back alignment and structure |
| >pdb|1PS3|A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine Length = 1045 | Back alignment and structure |
| >pdb|1QWN|A Chain A, Golgi Alpha-Mannosidase Ii Covalent Intermediate Complex With 5- Fluoro-Gulosyl-Fluoride Length = 1045 | Back alignment and structure |
| >pdb|3DX3|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Mannostatin Analog (1r,2r, 3s,4r,5r)-5-Aminocyclopentane-1,2,3,4-Tetraol Length = 1045 | Back alignment and structure |
| >pdb|1QWU|A Chain A, Golgi Alpha-Mannosidase Ii D341n Mutant Complex With 5-F-Guloside Length = 1045 | Back alignment and structure |
| >pdb|3CV5|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant Complex With 3alpha,6alpha-Mannopentaose Length = 1045 | Back alignment and structure |
| >pdb|1HTY|A Chain A, Golgi Alpha-Mannosidase Ii Length = 1015 | Back alignment and structure |
| >pdb|1O7D|D Chain D, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 282 | Back alignment and structure |
| >pdb|1O7D|B Chain B, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 84 | Back alignment and structure |
| >pdb|1O7D|C Chain C, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 159 | Back alignment and structure |
| >pdb|1O7D|E Chain E, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 126 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... Length = 1045 | Back alignment and structure |
|---|
Score = 756 bits (1953), Expect = 0.0
Identities = 239/1038 (23%), Positives = 415/1038 (39%), Gaps = 128/1038 (12%)
Query: 27 YVKYNTGAGVVAGKLNVHLVAHSHDDVGWLKTVDQYYVGSNNSIQSACVENVLDSVVEAL 86
+KY+ KL V +V HSH+D GW++T ++YY +++L + + L
Sbjct: 67 NIKYDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQH--------DTKHILSNALRHL 118
Query: 87 RRDPNRKFVFAEMAFFHRWWVGQSPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHYVDM 146
+P KF++AE+++F R++ + Q++ +V QLEFV GGW M DEA +H+ ++
Sbjct: 119 HDNPEMKFIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNV 178
Query: 147 IDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELGFDSVHFARIDYQDRAKR 206
+ Q T G ++KQ N TP A W I PFGHS Y+L + GF ++ R Y + +
Sbjct: 179 LLQLTEGQTWLKQFMNVTPTASWAIAPFGHSPTMPYIL-QKSGFKNMLIQRTHYSVKKEL 237
Query: 207 KEDKSLEVIWRGSKTFGSSSQIFTNAFPVH-YSPP----------SGFHFELTDDFD--- 252
+ + LE +WR + +FT+ P + Y P F F+ F
Sbjct: 238 AQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSFGLSC 297
Query: 253 -PVQDNPLLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESWFKQ---M 308
+ NV + +D +A + R N ++ +GDDF+++ W Q
Sbjct: 298 PWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNY 357
Query: 309 DKLIHYVNKGGR--VNALYSTPSLYTEA----KNAANGPWPLKTDDYFPYADRRNAYWTG 362
++L ++N V A + T Y +A + A +P + D+F YADR + YW+G
Sbjct: 358 ERLFEHINSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSG 417
Query: 363 FFTSRPALKGYVRVLSGFYLASRQLEFLAGKKSPGPTTSALGDA---LGIAQHHDAVTGT 419
++TSRP K RVL + A+ L L A L + QHHD +TGT
Sbjct: 418 YYTSRPYHKRMDRVLMHYVRAAEMLSAWHSWDGMARIEERLEQARRELSLFQHHDGITGT 477
Query: 420 AKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPASTF----SQCPLLNIS 475
AK H DY +R+ ++V+ S+ L ++ S + S F S+ P +
Sbjct: 478 AKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSIYSPDFSFSYFTLDDSRWPGSGVE 537
Query: 476 YCPPTEK-GIPEGKNLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDN 534
T G + V +N L R ++ V+ + V D N + Q + +
Sbjct: 538 DSRTTIILGEDILPSKHVVMHNTLPHWREQLVDFYVSSPFVSVTDLANNPVEAQVSPVWS 597
Query: 535 VTSNLRKFYTEAYLGQSSKRVPRYWLLFQVTVPPLGWNTYFISRAAGK------------ 582
+ +Y ++F+ VPP+G TY ++ + K
Sbjct: 598 WHHDTLTKTIHPQGST-----TKYRIIFKARVPPMGLATYVLTISDSKPEHTSYASNLLL 652
Query: 583 -----VKRRKGFFLAADSPQDKTVEVGPGNLKMSFSRTTGQLKRMYNSRTGVDVPIQQSF 637
+ + + + GN G LK + ++ VP+ F
Sbjct: 653 RKNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSEQGLLKSIQLTQDSPHVPVHFKF 712
Query: 638 LWYGSMVDTQSSGAYIFRPNGAQPNVVSRSVPIKIIRGPMVDEVHQQFNSWIYQVTRLYI 697
L YG SGAY+F PNG V + + +G + V S ++Q +
Sbjct: 713 LKYGVRSHGDRSGAYLFLPNGPASPVELGQPVVLVTKGKLESSVSVGLPSVVHQT-IMRG 771
Query: 698 DKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSL 757
IG + E++ R+ ++ + +FYTD NG F+KR R +
Sbjct: 772 GAPEIRNLVDIGSLD-----NTEIVMRLETHIDSGDIFYTDLNGLQFIKRRRLDK----- 821
Query: 758 QVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHR--------GV 809
P+ NYYP+ G+FI D + ++L + GG+S+ G++EIM R G+
Sbjct: 822 ---LPLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGL 878
Query: 810 GEALDESVCVRDNCEGLTVRGNYYLSVNQL---GAGARWRRTTGQEVYSPLLLAFTQEKL 866
G+ + ++ V + + N + ++L G Q + PL E
Sbjct: 879 GQGVLDNKPVLHIYRLVLEKVNNCVRPSKLHPAGYLTSAAHKASQSLLDPLDKFIFAE-- 936
Query: 867 ETWTESHLTKSTAMESDYSLPLNVALITLEELDDGS-------VLLRLAHLYEEGEDAEY 919
W + S ++ + + L S +L +L + G E+
Sbjct: 937 NEWIGAQGQFGG---DHPSAREDLDVSVMRRLTKSSAKTQRVGYVLHRTNLMQCGTPEEH 993
Query: 920 STLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVEGESGKTHSPVRGGPLDAS 979
+ K+++ + ++ + + +L+ Q + M
Sbjct: 994 T--QKLDVCHLL--PNVARCERTTLTFLQNLEHLDGMV---------------------- 1027
Query: 980 TLVVELGPMEIRTFLLKF 997
E+ PME ++
Sbjct: 1028 --APEVCPMETAAYVSSH 1043
|
| >1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1 Length = 298 | Back alignment and structure |
|---|
| >3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} Length = 899 | Back alignment and structure |
|---|
| >2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A* Length = 923 | Back alignment and structure |
|---|
| >1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Length = 282 | Back alignment and structure |
|---|
| >1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6 Length = 159 | Back alignment and structure |
|---|
| >1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Length = 126 | Back alignment and structure |
|---|
| >1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1 Length = 84 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A* Length = 659 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 997 | |||
| 3bvx_A | 1045 | Alpha-mannosidase 2; family 38 glycoysl hydrolase, | 100.0 | |
| 2wyh_A | 923 | Alpha-mannosidase; hydrolase, glycosidase, glycosi | 100.0 | |
| 3lvt_A | 899 | Glycosyl hydrolase, family 38; PSI, MCSG, structur | 100.0 | |
| 1o7d_A | 298 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 100.0 | |
| 1o7d_D | 282 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 100.0 | |
| 1o7d_C | 159 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 99.96 | |
| 1o7d_E | 126 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 99.93 | |
| 1o7d_B | 84 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 99.88 | |
| 1k1x_A | 659 | 4-alpha-glucanotransferase; 2.40A {Thermococcus li | 99.8 | |
| 3p0b_A | 540 | TT1467 protein; glycoside hydrolase GH57, glycogen | 98.94 | |
| 3n98_A | 562 | Alpha-amylase, GH57 family; GH57 family member, br | 98.8 | |
| 2b5d_X | 528 | Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2. | 98.72 | |
| 3rxz_A | 300 | Polysaccharide deacetylase; structural genomics, P | 96.34 | |
| 3cl6_A | 308 | PUUE allantoinase; URIC acid, nitrogen fixation, h | 95.82 | |
| 3s6o_A | 321 | Polysaccharide deacetylase family protein; ssgcid, | 95.36 | |
| 3qbu_A | 326 | Putative uncharacterized protein; metallo enzyme, | 94.49 | |
| 2cc0_A | 195 | Acetyl-xylan esterase; hydrolase, carbohydrate est | 91.8 | |
| 2y8u_A | 230 | Chitin deacetylase; hydrolase; 1.99A {Emericella n | 89.74 | |
| 2j13_A | 247 | Polysaccharide deacetylase; family 4, peptidoglyca | 83.16 | |
| 2iw0_A | 254 | Chitin deacetylase; hydrolase, chitin DE-N-acetyla | 83.09 | |
| 1ny1_A | 240 | Probable polysaccharide deacetylase PDAA; structur | 80.97 | |
| 2vyo_A | 254 | ECU11_0510, chitooligosaccharide deacetylase; CE4 | 80.09 |
| >3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-161 Score=1521.82 Aligned_cols=894 Identities=26% Similarity=0.436 Sum_probs=753.6
Q ss_pred ecCCCCccCCceEEEEEeccccCCCchhhHHhhhccCCccchhhhHHHHHHHHHHHHHcCCCCcEEEechHHHHHHHhhc
Q 001910 30 YNTGAGVVAGKLNVHLVAHSHDDVGWLKTVDQYYVGSNNSIQSACVENVLDSVVEALRRDPNRKFVFAEMAFFHRWWVGQ 109 (997)
Q Consensus 30 ~~~~~~~~~~~~~VhlvpHSH~D~gWl~t~~ey~~g~~~~~~~~~v~~il~~vl~~L~~~p~~kF~~~e~~~~~~w~~~~ 109 (997)
|+.+.+....+++||+|||||+|+|||||+++||. ..++++|++|+++|+++|++||+|+|++||++||+++
T Consensus 70 ~~~~~~~~~~~~~V~lV~HsH~D~gWl~t~~e~~~--------~~~~~~~~~vl~~L~~~p~~~F~~~e~~~l~~w~~e~ 141 (1045)
T 3bvx_A 70 YDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQ--------HDTKHILSNALRHLHDNPEMKFIWAEISYFARFYHDL 141 (1045)
T ss_dssp CCGGGSBTTBCEEEEEEEEEECCSSSSSCHHHHHH--------HTHHHHHHHHHHHHHHCTTCCEEECCHHHHHHHHHHS
T ss_pred hhccccCCCCceEEEEEecCCCCccccchHHHhhh--------HHHHHHHHHHHHHHHHCCCcEEEEecHHHHHHHHHHC
Confidence 44433444458999999999999999999999997 6899999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHcCCeEEEceeeeeecccCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCChhhHHHHhhhcC
Q 001910 110 SPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGVELG 189 (997)
Q Consensus 110 ~p~~~~~vk~lV~~GrlE~v~GgWv~~Dea~~~~es~I~ql~~G~~~l~~~fG~~p~v~w~iD~FGhs~~~p~ll~~~~G 189 (997)
+|+.+++||+||++|||||+||||||+|||++||||+||||++||+|++++||+.|++||+|||||||+++|+||+ +||
T Consensus 142 ~Pe~~~~vk~lV~~Grle~~gG~Wv~~De~~~~~EslirQl~~G~~~~~~~FG~~~~~~W~pD~FG~s~~lPqil~-~~G 220 (1045)
T 3bvx_A 142 GENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIAPFGHSPTMPYILQ-KSG 220 (1045)
T ss_dssp CHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCSSSBCTHHHHHHH-TTT
T ss_pred CHHHHHHHHHHHhCCCEEEECCccccccccCCCHHHHHHHHHHHHHHHHHHhCCCCceEEcCCCCCccHHHHHHHH-HcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred CcEEEEeccChHHHHhhhccCCeeEEEecCCCCCCCCceEEeecCC-CCCCC------C----CCCcccCCC---CCCcc
Q 001910 190 FDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPV-HYSPP------S----GFHFELTDD---FDPVQ 255 (997)
Q Consensus 190 ~~~~~~~Ri~~~~~~~~~~~~~~eF~W~g~d~~~~gs~I~t~~~~~-~Y~~p------~----~f~f~~~~~---~~p~~ 255 (997)
|++++|+|++|++++.|+..+.+||+|+|+++...|++||||++|. +|+.| . +|+|+...+ .|||.
T Consensus 221 i~~~~~~R~~~~~~~~~~~~k~~eF~W~~~w~~~dGs~Ilt~~~p~~~Y~~~~~~gp~~~~c~~fdf~~l~~~~~~~~~~ 300 (1045)
T 3bvx_A 221 FKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSFGLSCPWK 300 (1045)
T ss_dssp CCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEECCSSCSSGGGTSSSCHHHHGGGCGGGSSTTSCCCTTS
T ss_pred CCeEEEecccccccccccccCCceEEEeCCCCCCCCCeEEEEeccccccCcccccCCCccccccccccccccccccCccc
Confidence 9999999999999999999999999999765555599999999994 57532 1 366665433 57887
Q ss_pred CCC-CCCcccHHHHHHHHHHHHHHhccccCCCeEEEeecCCCCccchHHH---HHHHHHHHHHHhcCC--ceeEEEcChh
Q 001910 256 DNP-LLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESW---FKQMDKLIHYVNKGG--RVNALYSTPS 329 (997)
Q Consensus 256 ~~~-~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~~~~a~~~---~~~~~~li~~~N~~~--~~~i~~sT~~ 329 (997)
++| .++++|++++++.|++++++++..|+++++|+|+|+||+|+++..| |+||+++|+++|+.+ .++++|||++
T Consensus 301 ~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~t~~~l~~~G~d~~~~~~~~~~~~~~n~~~li~~in~~~~~~~~v~~sT~~ 380 (1045)
T 3bvx_A 301 VPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQFGTLQ 380 (1045)
T ss_dssp CCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHHHHHHHHHHHHHHHCGGGCEEEEECCHH
T ss_pred CCcccccHHHHHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchhhhHHHHHHHHHHHHHHhhCCCCCceEEECCHH
Confidence 665 3567899999999999999999999999999999999999998765 999999999999753 5899999999
Q ss_pred hHHHHHHhcC----CCCCCccCCCccccccCCCcceeeeecccchhhHHHHhhhHHHHHHHHHHhhCC---CCCCCchHH
Q 001910 330 LYTEAKNAAN----GPWPLKTDDYFPYADRRNAYWTGFFTSRPALKGYVRVLSGFYLASRQLEFLAGK---KSPGPTTSA 402 (997)
Q Consensus 330 ~Yf~~v~~~~----~~~p~~~gDf~py~~~~~~yWtG~yTSrp~~K~~~R~~e~~L~~ae~l~~l~~~---~~~~~~~~~ 402 (997)
+||+++++.. ..||+++||||||+++.++||+|||||||.+|+++|++|++|++||+|++++.. .++...+++
T Consensus 381 ~yf~~l~~~~~~~~~~lp~~~Ge~~~~~~~~~~yw~G~yTSr~~~K~~nR~~e~~L~~aE~l~ala~~~~~~~~~~~L~~ 460 (1045)
T 3bvx_A 381 EYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRAAEMLSAWHSWDGMARIEERLEQ 460 (1045)
T ss_dssp HHHHHHHHHHHTTSCCCCEEESCBCSCEEETTEECCGGGTSSHHHHHHHHHHHHHHHHHHHHHHTSCCCGGGCHHHHHHH
T ss_pred HHHHHHHhhcccccccCcccCCcccccccCCcccccceecccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHH
Confidence 9999998753 369999999999999999999999999999999999999999999999998754 345567889
Q ss_pred HHHHHHhhccccCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCCCCC---CCcccccccccccCCC
Q 001910 403 LGDALGIAQHHDAVTGTAKQHTTNDYAKRLAIGASEAEVVVSSSLSCLASRKSGHQCTKPA---STFSQCPLLNISYCPP 479 (997)
Q Consensus 403 l~~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~---~~~~~~~~ln~s~~~~ 479 (997)
+|++|+++||||+||||++++|++||.+||.+|.+.++.++..+++.|+..... .+..++ ..+..|.+++.+.|+.
T Consensus 461 ~wk~lll~QhHD~i~Gts~~~V~~d~~~rl~~a~~~~~~l~~~al~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (1045)
T 3bvx_A 461 ARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSI-YSPDFSFSYFTLDDSRWPGSGVEDS 539 (1045)
T ss_dssp HHHHHHHHTBTTTTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCTTT-CCCCTTSCSEEEECSSSSCTTTCCC
T ss_pred HHHHHhccccccCCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-ccccccccccchhhhcccccccccc
Confidence 999999999999999999999999999999999999999999999999853211 111111 1223455567777775
Q ss_pred CCCCCC-CCC---eEEEEEEcCCCcceeEEEEEEEcCCcEEEEcCCCCeeeEEEeeccccccccchhhhhhccCCCCCCC
Q 001910 480 TEKGIP-EGK---NLVVAAYNPLGWNRTDIIRIPVNDANLIVKDPLGNAINVQYVNLDNVTSNLRKFYTEAYLGQSSKRV 555 (997)
Q Consensus 480 ~~~~~~-~~~---~~~v~v~Npl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (997)
... +. .++ ...|+|||||+|+|+++|+|+|+.+.+.|+|.+|++|++|+++.+.....+....+ ......
T Consensus 540 ~~~-i~~~~~~~~~~~vvvfN~L~~~r~~~V~v~v~~~~~~V~D~~G~~v~~Qi~~~~~~~~~~~~~~~-----~~~~~~ 613 (1045)
T 3bvx_A 540 RTT-IILGEDILPSKHVVMHNTLPHWREQLVDFYVSSPFVSVTDLANNPVEAQVSPVWSWHHDTLTKTI-----HPQGST 613 (1045)
T ss_dssp CCE-ECCBTTTBSEEEEEEEECSSSCEEEEEEEEESCSCEEEEETTCCEECEEEEEEEEEEEETTTTEE-----EEEEEE
T ss_pred ccc-ccccccccCCceEEEEcCCCcceeeEEEEEeccCceEEEcCCCCEEeEEEeeccccccccccccc-----cccCCC
Confidence 421 10 122 56899999999999999999999999999999999999999987643221100000 000012
Q ss_pred CcEEEEEEEeeCCCceEEEEEEecCCccc-cccccc----------ccc-CCCCCCceEecCCeE------EEEEEcCCC
Q 001910 556 PRYWLLFQVTVPPLGWNTYFISRAAGKVK-RRKGFF----------LAA-DSPQDKTVEVGPGNL------KMSFSRTTG 617 (997)
Q Consensus 556 ~~~~l~f~~~vP~lG~~~y~i~~~~~~~~-~~~~~~----------~~~-~~~~~~~~~ieN~~~------~v~~d~~~G 617 (997)
..|+|+|.++||||||++|.|........ ...+.+ ... .....+...|||++| +|+||+ +|
T Consensus 614 ~~~~L~f~a~vP~lG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~leN~~~~~~~~~~v~fd~-~G 692 (1045)
T 3bvx_A 614 TKYRIIFKARVPPMGLATYVLTISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSE-QG 692 (1045)
T ss_dssp EEEEEEEEEEECTTEEEEEEEEECSSCCTTEEECEEEEECSSCCCCCCTTCSSCCEEECCCCEEEECTTSCEEEECT-TS
T ss_pred CcEEEEEEeccCCceeEEEEEEecCCccccccccceeecccccccccccccccCCCceeecccccccccccEEEECC-CC
Confidence 45789999999999999999987654322 100011 000 001334578999999 999995 99
Q ss_pred cEEEEEecCCceeeeeeeEEEEeecccCCCCCCcceEccCCCc-ccccCCCccEEEEecCceEEEEEEecceEEEEEEEe
Q 001910 618 QLKRMYNSRTGVDVPIQQSFLWYGSMVDTQSSGAYIFRPNGAQ-PNVVSRSVPIKIIRGPMVDEVHQQFNSWIYQVTRLY 696 (997)
Q Consensus 618 ~l~si~dk~~g~~~~~~~~f~~Y~~~~~~~~sgAY~F~P~~~~-~~~~~~~~~i~i~~Gpl~~~v~~~~~~~i~q~vrLy 696 (997)
.|++|+||++|+++.+.++|.+|.+...++.||||+|+|++.+ +... ....+.+++||++++|++.+ .+++|++||
T Consensus 693 ~L~si~dk~~g~e~~~~~~f~~Y~~~~~~~~sgaY~F~P~~~~~~~~~-~~~~~~v~~Gpl~~ev~~~~-~~i~q~irL- 769 (1045)
T 3bvx_A 693 LLKSIQLTQDSPHVPVHFKFLKYGVRSHGDRSGAYLFLPNGPASPVEL-GQPVVLVTKGKLESSVSVGL-PSVVHQTIM- 769 (1045)
T ss_dssp CEEEEECSTTSCCEEEEEEEEEECBCSSSCCCCSSCCCBSSSCEECCC-CSCCEEEEECSSCEEEEEEE-TTEEEEEEE-
T ss_pred cEEEEEEcCCCeEEEEeeEEEEEecccCCCCCcceEecCCCCCccccc-CCceEEEEeCCeEEEEEEEE-eeEEEEEEE-
Confidence 9999999999999999999999986544679999999999886 3333 35678889999999999999 679999999
Q ss_pred ecCCceeEEEEECCeeccCCCCcEEEEEEEeeccCCcEEEEccCCccccccccccccccccCCCCCcccceEeeceeEEE
Q 001910 697 IDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFI 776 (997)
Q Consensus 697 ~~~~~ie~e~~v~~ip~~d~~~~e~~~rf~t~i~s~~~fytDsnG~~~ikR~~~~r~~w~~~~~~pv~~NyYP~~s~~~I 776 (997)
++++||++++|+. .+..|||++++|+|+|++++.||||+|||++++|+++. .+|+++|||||+++|+|
T Consensus 770 -~~~~ieie~~Vd~---~~~~~~el~~rf~t~i~s~~~fyTD~nG~~~ikR~~~~--------~~p~~~NyYPv~s~~~i 837 (1045)
T 3bvx_A 770 -RGGAPEIRNLVDI---GSLDNTEIVMRLETHIDSGDIFYTDLNGLQFIKRRRLD--------KLPLQANYYPIPSGMFI 837 (1045)
T ss_dssp -SSSSCEEEEEECC---TTCTTEEEEEEEEECCCCTTEEEEEETTTEEEEEECCT--------TSCGGGGCEEESSEEEE
T ss_pred -CCeeEEEEEEEec---CCCCCeEEEEEeecccCCCCeEEEecCCceeEEcCCCC--------CCCcccceEEeeeeEEE
Confidence 7889999999953 34458999999999999999999999999999999874 37899999999999999
Q ss_pred eeCCceEEEEeCCCceeeeccCcEEEEEEec--------CCCCccccccccccCCCCceEeeeEEEeccccCccch----
Q 001910 777 TDKKSEFSVLVDRATGGASIKDGQVEIMLHR--------GVGEALDESVCVRDNCEGLTVRGNYYLSVNQLGAGAR---- 844 (997)
Q Consensus 777 ~D~~~~ltvltdr~~G~~s~~~G~ielmL~R--------Gvge~l~e~~~~~~~~~gl~~~g~~~l~l~~~~~~~~---- 844 (997)
+|++.||||++||++||+|+++|+||||||| ||||+|+|+ ++++|+|||+|++...+..
T Consensus 838 ~D~~~~ltvl~drs~G~sSl~~G~lElmlhRrl~~DD~rGvge~l~d~---------~~~~~~~~l~l~~~~~~~~~~~~ 908 (1045)
T 3bvx_A 838 EDANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGVLDN---------KPVLHIYRLVLEKVNNCVRPSKL 908 (1045)
T ss_dssp ECSSEEEEEEESSCEEEECCSTTEEEEEEEEEBCSCCSSSCCSCBCCC---------CCEEEEEEEEEEECTTSCCCCTT
T ss_pred EcCCeeEEEEecCCccccccCCCeEEEEEeeeeccCCcccccccccCC---------ceeeeEEEEEEeccccccccccc
Confidence 9999999999999999999999999999999 999999986 4789999999987764331
Q ss_pred --------hcccchhhhcccceeeeeccccccccccccCccccCccCCCCCCcceEEEeeecCCCc-----EEEEEecc-
Q 001910 845 --------WRRTTGQEVYSPLLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLEELDDGS-----VLLRLAHL- 910 (997)
Q Consensus 845 --------~~r~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~s~l~~~~~lp~nv~lltl~~~~~~~-----illRl~~~- 910 (997)
..|..++++++||+++++.... + .....+|+++.. +|||||||+||++++++. +|||| |.
T Consensus 909 ~~~~~~s~~~~~~~~~l~~p~~~~~~~~~~--~-~~~~~~~~~l~~--~lP~~vhlltL~~~~~~~~~~~~~ll~L-~~~ 982 (1045)
T 3bvx_A 909 HPAGYLTSAAHKASQSLLDPLDKFIFAENE--W-IGAQGQFGGDHP--SAREDLDVSVMRRLTKSSAKTQRVGYVL-HRT 982 (1045)
T ss_dssp CSEECCCHHHHHHHHHHHSCCEEEEECSSC--C-TTBCSEECTTSC--CCCTTEEEEEEEECSCTTCSEEEEEEEE-EEC
T ss_pred ccccccCHHHHHHHHHHhCCcceeeccCcc--c-ccccccCCcccc--cCCCCEEEEEeEecCCCCccCceEEEEE-eee
Confidence 2456788999999998875322 1 224566777754 899999999999999887 99999 66
Q ss_pred -cccCCCCCcceeeEeehhhhcCcCccceeeecccccccchhhccceeeeeeCCCCCcCCCCCCCCCCCCCceEEecCCc
Q 001910 911 -YEEGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVEGESGKTHSPVRGGPLDASTLVVELGPME 989 (997)
Q Consensus 911 -~~~~~~~~~s~~~~v~l~~lf~~~~v~~~~E~sLt~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~v~l~P~e 989 (997)
|+++++.. +++++|||.+||.. +.+++||||||++.++++. +...|+|+|||
T Consensus 983 ~~~~~~~~~-s~~~~~~l~~lf~~--i~~~~etsL~~~~~~~~~~------------------------~~~~v~l~Pme 1035 (1045)
T 3bvx_A 983 NLMQCGTPE-EHTQKLDVCHLLPN--VARCERTTLTFLQNLEHLD------------------------GMVAPEVCPME 1035 (1045)
T ss_dssp CCCCCSCCC-CCCCCCCGGGSSSS--EEEEEEECTTSCSEEEECG------------------------GGCCCCCCTTC
T ss_pred ccccCcCcc-cCcccccHHHHhcC--cceEEEecccCCccccccC------------------------CCcceEEcCce
Confidence 88988766 78999999999998 9999999999999876531 13479999999
Q ss_pred eeEEEEEC
Q 001910 990 IRTFLLKF 997 (997)
Q Consensus 990 IrTf~i~~ 997 (997)
||||+|+|
T Consensus 1036 irTf~i~~ 1043 (1045)
T 3bvx_A 1036 TAAYVSSH 1043 (1045)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEe
Confidence 99999985
|
| >2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A* | Back alignment and structure |
|---|
| >3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} | Back alignment and structure |
|---|
| >1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1 | Back alignment and structure |
|---|
| >1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 | Back alignment and structure |
|---|
| >1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6 | Back alignment and structure |
|---|
| >1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 | Back alignment and structure |
|---|
| >1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1 | Back alignment and structure |
|---|
| >1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A* | Back alignment and structure |
|---|
| >3p0b_A TT1467 protein; glycoside hydrolase GH57, glycogen branching, transferase; 1.35A {Thermus thermophilus} PDB: 1ufa_A | Back alignment and structure |
|---|
| >3n98_A Alpha-amylase, GH57 family; GH57 family member, branching enzyme, transferase; HET: BGC PG4; 1.87A {Thermococcus kodakarensis} PDB: 3n92_A* 3n8t_A* | Back alignment and structure |
|---|
| >2b5d_X Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2.20A {Thermotoga maritima} SCOP: a.8.3.3 c.6.2.4 | Back alignment and structure |
|---|
| >3rxz_A Polysaccharide deacetylase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, carbohydrate esterase family 4; 2.01A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
| >3cl6_A PUUE allantoinase; URIC acid, nitrogen fixation, hydrolase; 1.58A {Pseudomonas fluorescens} PDB: 3cl7_A 3cl8_A 1z7a_A | Back alignment and structure |
|---|
| >3s6o_A Polysaccharide deacetylase family protein; ssgcid, NIH, structural genomics, seattle structural genomic for infectious disease; 1.85A {Burkholderia pseudomallei} SCOP: c.6.2.6 | Back alignment and structure |
|---|
| >3qbu_A Putative uncharacterized protein; metallo enzyme, peptidoglycan, TIM barrel, deacetylase, HYDR; 2.57A {Helicobacter pylori} | Back alignment and structure |
|---|
| >2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3 | Back alignment and structure |
|---|
| >2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans} | Back alignment and structure |
|---|
| >2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3 | Back alignment and structure |
|---|
| >2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3 | Back alignment and structure |
|---|
| >1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1 | Back alignment and structure |
|---|
| >2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 997 | ||||
| g1o7d.2 | 490 | b.30.5.6 (C:488-585,D:603-875,E:885-1007) Lysosoma | 1e-138 | |
| d3bvua2 | 522 | b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II { | 1e-120 | |
| g1o7d.3 | 330 | c.6.2.1 (A:51-342,B:347-384) Lysosomal alpha-manno | 1e-116 | |
| d3bvua3 | 381 | c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fru | 1e-108 | |
| d1k1xa3 | 310 | c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-te | 5e-44 | |
| d3bvua1 | 111 | a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fr | 4e-27 | |
| g1o7d.1 | 95 | a.8.3.1 (B:385-422,C:431-487) Lysosomal alpha-mann | 2e-24 |
| >d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 522 | Back information, alignment and structure |
|---|
| >d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 381 | Back information, alignment and structure |
|---|
| >d1k1xa3 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Length = 310 | Back information, alignment and structure |
|---|
| >d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 111 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 997 | |||
| d3bvua3 | 381 | Golgi alpha-mannosidase II {Fruit fly (Drosophila | 100.0 | |
| g1o7d.2 | 490 | Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax | 100.0 | |
| g1o7d.3 | 330 | Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax | 100.0 | |
| d3bvua2 | 522 | Golgi alpha-mannosidase II {Fruit fly (Drosophila | 100.0 | |
| d1k1xa3 | 310 | 4-alpha-glucanotransferase, N-terminal domain {Arc | 99.97 | |
| d3bvua1 | 111 | Golgi alpha-mannosidase II {Fruit fly (Drosophila | 99.93 | |
| g1o7d.1 | 95 | Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax | 99.92 | |
| d2b5dx2 | 404 | Alpha-amylase AmyC {Thermotoga maritima [TaxId: 23 | 98.35 | |
| d1ufaa2 | 412 | Hypothetical protein TT1467, N-terminal domain {Th | 97.83 | |
| d1z7aa1 | 301 | Hypothetical protein PA1517 {Pseudomonas aeruginos | 95.38 | |
| d2cc0a1 | 192 | Acetyl-xylan esterase {Streptomyces lividans [TaxI | 89.12 | |
| d2c1ia1 | 196 | Peptidoglycan GlcNAc deacetylase C-terminal domain | 88.74 | |
| d2j13a1 | 235 | Putative polysaccharide deacetylase BA0424 {Bacill | 84.62 | |
| d1ny1a_ | 235 | Probable polysaccharide deacetylase PdaA {Bacillus | 84.38 |
| >d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycoside hydrolase/deacetylase family: alpha-mannosidase domain: Golgi alpha-mannosidase II species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=1e-80 Score=691.63 Aligned_cols=320 Identities=31% Similarity=0.599 Sum_probs=296.9
Q ss_pred eeeecCCCCccCCceEEEEEeccccCCCchhhHHhhhccCCccchhhhHHHHHHHHHHHHHcCCCCcEEEechHHHHHHH
Q 001910 27 YVKYNTGAGVVAGKLNVHLVAHSHDDVGWLKTVDQYYVGSNNSIQSACVENVLDSVVEALRRDPNRKFVFAEMAFFHRWW 106 (997)
Q Consensus 27 ~~~~~~~~~~~~~~~~VhlvpHSH~D~gWl~t~~ey~~g~~~~~~~~~v~~il~~vl~~L~~~p~~kF~~~e~~~~~~w~ 106 (997)
.+.|+.+.....+|++||||||||+|+||+||+++|+. ..+++||++||+.|+++|++||+|+|++||.+||
T Consensus 37 ~~~~~~~~~~~~~kl~VhlV~HsH~D~gWl~t~~e~~~--------~~~~~il~~~l~~l~~~p~~~F~~~~~~~~~~w~ 108 (381)
T d3bvua3 37 NIKYDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQ--------HDTKHILSNALRHLHDNPEMKFIWAEISYFARFY 108 (381)
T ss_dssp CCCCCGGGCBTTBCEEEEEEEEEECCSSSSSCHHHHHH--------HTHHHHHHHHHHHHHHCTTCCEEECCHHHHHHHH
T ss_pred ceeechhhcCcCCCcEEEEeCCCCCChhhcCcHHHHHH--------HHHHHHHHHHHHHHHHCCCCEEEEechHHHHHHH
Confidence 34488888888899999999999999999999999997 6789999999999999999999999999999999
Q ss_pred hhcChHHHHHHHHHHHcCCeEEEceeeeeecccCCChHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCChhhHHHHhh
Q 001910 107 VGQSPEIQEQVRKLVDASQLEFVNGGWCMHDEATTHYVDMIDQTTLGHHYIKQHFNKTPKAGWQIDPFGHSAVQAYLLGV 186 (997)
Q Consensus 107 ~~~~p~~~~~vk~lV~~GrlE~v~GgWv~~Dea~~~~es~I~ql~~G~~~l~~~fG~~p~v~w~iD~FGhs~~~p~ll~~ 186 (997)
++++|+.+++||+||++|||||+||||||+||+++|+|++||||++||+|++++||+.|++||+|||||||++||+||+
T Consensus 109 ~~~~pe~~~~vk~lV~~GrlEivgg~wv~~De~~~~~es~Irql~~G~~~l~~~fG~~p~~~w~~D~FGhs~~lp~il~- 187 (381)
T d3bvua3 109 HDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIAPFGHSPTMPYILQ- 187 (381)
T ss_dssp TTSCHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECSSSSBCTHHHHHHH-
T ss_pred HHcCHHHHHHHHHHHHCCCEEEeCCeeecccccCCCHHHHHHHHHHHHHHHHHHcCCCCceEEeeCCCCccHHHHHHHH-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hcCCcEEEEeccChHHHHhhhccCCeeEEEecCCCCCCCCceEEeecCCC-CCCCC----------CCCcccCC---CCC
Q 001910 187 ELGFDSVHFARIDYQDRAKRKEDKSLEVIWRGSKTFGSSSQIFTNAFPVH-YSPPS----------GFHFELTD---DFD 252 (997)
Q Consensus 187 ~~G~~~~~~~Ri~~~~~~~~~~~~~~eF~W~g~d~~~~gs~I~t~~~~~~-Y~~p~----------~f~f~~~~---~~~ 252 (997)
++||++++++|++|++++.++..+.+||+|++.+....|++||||++|.+ |+.|+ +|+|.+.. .+|
T Consensus 188 ~~Gi~~~~~~R~~~~~~~~~~~~k~lef~w~~~W~~~~~s~ilth~~~~~~Y~~p~~~~~d~~~~~~f~f~~~~~~~~~~ 267 (381)
T d3bvua3 188 KSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSFGLSC 267 (381)
T ss_dssp TTTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEECCSSCSSGGGTSSSCHHHHGGGCGGGSSTTSCCC
T ss_pred hcCCCeEEEEecchhhhcccccccccceeecccccCCCCCceeEecccccccCCcccCCCCcccccccccccccccCCCC
Confidence 99999999999999999999999999999999988777999999999875 77765 35555542 357
Q ss_pred CccCCC-CCCcccHHHHHHHHHHHHHHhccccCCCeEEEeecCCCCccchHHH---HHHHHHHHHHHhcC--CceeEEEc
Q 001910 253 PVQDNP-LLDGYNVEQWVNDFIDAALTQANVTRDNHIMWTMGDDFQYQYAESW---FKQMDKLIHYVNKG--GRVNALYS 326 (997)
Q Consensus 253 p~~~~~-~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~~~~a~~~---~~~~~~li~~~N~~--~~~~i~~s 326 (997)
|+..++ .++++|++++++.|++++++++..|+|++||+|+|+||+|.++..| |+||++||+++|+. ..++++||
T Consensus 268 p~~~~~~~i~~~nv~~r~~~~~~~~~~~a~~~~tn~vL~p~G~Df~y~~a~~w~~~~~n~~kli~~iN~~~~~~v~i~~S 347 (381)
T d3bvua3 268 PWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQFG 347 (381)
T ss_dssp TTSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHHHHHHHHHHHHHHHCGGGCEEEEEC
T ss_pred CcccCCcccchhHHHHHHHHHHHHHHHHhhccCCCeEEEccccCCCCCccchHHHHHHhHHHHHHHHHhCCCCCeEEEEC
Confidence 776654 5899999999999999999999999999999999999999999877 99999999999975 36899999
Q ss_pred ChhhHHHHHHhc----CCCCCCccCCCcccccc
Q 001910 327 TPSLYTEAKNAA----NGPWPLKTDDYFPYADR 355 (997)
Q Consensus 327 T~~~Yf~~v~~~----~~~~p~~~gDf~py~~~ 355 (997)
||++||++|++. +.+||+++||||||||+
T Consensus 348 T~~~Yf~al~~~~~~~~~~~P~~~gDFfpYad~ 380 (381)
T d3bvua3 348 TLQEYFDAVHQAERAGQAEFPTLSGDFFTYADR 380 (381)
T ss_dssp CHHHHHHHHHHHHHTTSCCCCEEESCBCSCBSS
T ss_pred CHHHHHHHHHHHHhhcCCCCCCcCCCCcCCCCC
Confidence 999999999864 57899999999999986
|
| >d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1k1xa3 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
| >d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d2b5dx2 c.6.2.4 (X:1-404) Alpha-amylase AmyC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1ufaa2 c.6.2.4 (A:1-412) Hypothetical protein TT1467, N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1z7aa1 c.6.2.6 (A:4-304) Hypothetical protein PA1517 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d2cc0a1 c.6.2.3 (A:1-192) Acetyl-xylan esterase {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
| >d2c1ia1 c.6.2.3 (A:268-463) Peptidoglycan GlcNAc deacetylase C-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d2j13a1 c.6.2.3 (A:1-235) Putative polysaccharide deacetylase BA0424 {Bacillus anthracis [TaxId: 1392]} | Back information, alignment and structure |
|---|
| >d1ny1a_ c.6.2.3 (A:) Probable polysaccharide deacetylase PdaA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|