Citrus Sinensis ID: 001960
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 991 | 2.2.26 [Sep-21-2011] | |||||||
| Q37145 | 1020 | Calcium-transporting ATPa | yes | no | 0.947 | 0.920 | 0.828 | 0.0 | |
| O81108 | 1014 | Calcium-transporting ATPa | no | no | 0.953 | 0.931 | 0.792 | 0.0 | |
| Q2QMX9 | 1020 | Calcium-transporting ATPa | yes | no | 0.947 | 0.920 | 0.793 | 0.0 | |
| O64806 | 1015 | Putative calcium-transpor | no | no | 0.953 | 0.931 | 0.781 | 0.0 | |
| Q6ATV4 | 1033 | Calcium-transporting ATPa | no | no | 0.892 | 0.855 | 0.725 | 0.0 | |
| Q9M2L4 | 1025 | Putative calcium-transpor | no | no | 0.935 | 0.904 | 0.637 | 0.0 | |
| O22218 | 1030 | Calcium-transporting ATPa | no | no | 0.937 | 0.901 | 0.638 | 0.0 | |
| Q2QY12 | 1039 | Probable calcium-transpor | no | no | 0.953 | 0.909 | 0.631 | 0.0 | |
| Q2RAS0 | 1017 | Probable calcium-transpor | no | no | 0.931 | 0.907 | 0.621 | 0.0 | |
| Q8RUN1 | 1043 | Calcium-transporting ATPa | no | no | 0.931 | 0.884 | 0.620 | 0.0 |
| >sp|Q37145|ACA1_ARATH Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 1591 bits (4119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 778/939 (82%), Positives = 850/939 (90%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEYT+PEEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLPEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGIN+FTESP+RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+FA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF SACLTGN
Sbjct: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTGN 840
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPP DLMKRSPVGRKGNFISNVMWRNILGQSLYQ
Sbjct: 841 APLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQL 939
+IIW LQT+GK +F LDGPD DL LNTLIFN FVFCQ+
Sbjct: 901 LVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIFVFCQV 939
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|O81108|ACA2_ARATH Calcium-transporting ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=ACA2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1538 bits (3981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 753/950 (79%), Positives = 851/950 (89%), Gaps = 5/950 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVKAK++SEE L++WR LCG VKN KRRFRFTANLSKR+EA A+RR+NQE
Sbjct: 1 MESYLNENF-DVKAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K R+AVLVS+AA QFI G++ S+YTVPE+V A+GF+IC DELGSIVE HD+KKLK HGG
Sbjct: 60 KLRIAVLVSKAAFQFISGVS-PSDYTVPEDVKAAGFEICADELGSIVESHDVKKLKFHGG 118
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+G+A KL S TDG+ST L++R+E++GINKF ES RGFWV+VWEAL DMTLMIL
Sbjct: 119 VDGLAGKLKASPTDGLSTEAAQLSQRQELFGINKFAESEMRGFWVFVWEALQDMTLMILG 178
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA VSL+VGIATEGWPKG+HDGLGI SILLVVFVTATSDY+QSLQF+DLD+EKKKITV
Sbjct: 179 VCAFVSLIVGIATEGWPKGSHDGLGIAASILLVVFVTATSDYRQSLQFRDLDKEKKKITV 238
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RNGFR+K+SIYDLLPGDIVHL +GDQVPADGLF+SGFSV+I+ESSLTGESEPV VNA
Sbjct: 239 QVTRNGFRQKLSIYDLLPGDIVHLAIGDQVPADGLFLSGFSVVIDESSLTGESEPVMVNA 298
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFL+SGTKVQ+GSCKM++TTVGMRTQWGKLMATL+EGGDDETPLQVKLNGVATIIGKI
Sbjct: 299 QNPFLMSGTKVQDGSCKMMITTVGMRTQWGKLMATLTEGGDDETPLQVKLNGVATIIGKI 358
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAVVTFAV+VQG+F RKL GTHW WSGD+ALE+LE+FAIAVTIVVVAVPEGLPLAV
Sbjct: 359 GLFFAVVTFAVLVQGMFMRKLSTGTHWVWSGDEALELLEYFAIAVTIVVVAVPEGLPLAV 418
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K+CIC +++V
Sbjct: 419 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCICMNVQDV 478
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
N KG+ + S IP SA KLL+QSIFNNTGGEVV+ + KTE+LGTPTETAILE GL LG
Sbjct: 479 AN-KGS-SLQSEIPESAVKLLIQSIFNNTGGEVVVNKHGKTELLGTPTETAILELGLSLG 536
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSNG 599
G FQ ER++ K++KVEPFNS KK+MGVVIELPEGG R H KGASEI+LAACDK +NS+G
Sbjct: 537 GKFQEERKSYKVIKVEPFNSTKKRMGVVIELPEGGRMRAHTKGASEIVLAACDKVVNSSG 596
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
EVVPL+E ++ +LN TI +FA+EALRTLCLA M+I FS D IP G+TC+GIVGIKD
Sbjct: 597 EVVPLDEESIKYLNVTINEFANEALRTLCLAYMDIEGGFSPDDAIPASGFTCVGIVGIKD 656
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGVKESV +CR AGITVRMVTGDNINTAKAIARECGILTD+GIAIEGP FREK+ EE
Sbjct: 657 PVRPGVKESVELCRRAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKNQEE 716
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
L +LIPKIQVMARSSPMDKHTLVK LRTT EVVAVTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 717 LLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAG 776
Query: 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVAL+VNFSSACLTG
Sbjct: 777 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALVVNFSSACLTG 836
Query: 840 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLY 899
+APLTAVQLLWVNMIMDTLGALALATEPPN +LMKR PVGR+GNFI+N MWRNILGQ++Y
Sbjct: 837 SAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRLPVGRRGNFITNAMWRNILGQAVY 896
Query: 900 QFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949
QF++IW LQ +GKA+F LDGPD L+LNTLIFN FVFCQ+ + + ++
Sbjct: 897 QFIVIWILQAKGKAMFGLDGPDSTLMLNTLIFNCFVFCQVFNEISSREME 946
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QMX9|ACA1_ORYSJ Calcium-transporting ATPase 1, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0586600 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1525 bits (3949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 745/939 (79%), Positives = 831/939 (88%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YL ENF VKAKN+SEEAL+RWRKLCG VKN KRRFRFTANL KR EA+AI+ +N E
Sbjct: 1 MESYLEENFGGVKAKNSSEEALRRWRKLCGVVKNPKRRFRFTANLDKRGEAQAIKHANHE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RVAVLVS+AALQFI GL+L SEY VPEEV A+GFQIC DELGSIVEGHD KKL HGG
Sbjct: 61 KLRVAVLVSKAALQFIQGLSLRSEYVVPEEVKAAGFQICADELGSIVEGHDSKKLITHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V GIA+KL+TS DG+ST+E + RR+++YG+NKFTES R FWV+VWEAL D TL+ILA
Sbjct: 121 VTGIADKLATSPADGLSTAEESIKRRQDVYGLNKFTESEVRSFWVFVWEALQDTTLIILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA VSLVVGIA EGWPKGAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD+EKKKI V
Sbjct: 181 VCAFVSLVVGIAMEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKIQV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RNGFR+++SIYDLLPGD+VHL +GDQVPADGLF+SGFS+LINESSLTGESEPV VN
Sbjct: 241 QVTRNGFRQRLSIYDLLPGDVVHLAIGDQVPADGLFISGFSLLINESSLTGESEPVVVNE 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFLLSGTKVQ+GSCKML+TTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 DNPFLLSGTKVQDGSCKMLITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TF V+ QGL ++K EG +WSGDDALE+LE FAIAVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFIVLSQGLISKKYHEGLLLSWSGDDALEMLEHFAIAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+KACIC IKEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACICGNIKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+N K S +P + K LL+SIFNNTGGEVVI + K +ILGTPTETA+LEF L LG
Sbjct: 481 NNPKNASDLCSELPETVVKTLLESIFNNTGGEVVIDQDGKYQILGTPTETALLEFALSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
G+F+A+R +KIVK+EPFNS KK+M VV++LP GG R HCKGASEI+LAACDKF++ G
Sbjct: 541 GNFKAKRDETKIVKMEPFNSTKKRMCVVLKLPGGGCRAHCKGASEIVLAACDKFMDETGA 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL++ + LN IE FA+EALRTLCL E+ FS + IP +GYTCIGIVGIKDP
Sbjct: 601 VVPLDKTTADKLNGIIESFANEALRTLCLGYREMEEGFSVEEQIPLQGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+ESVA CRSAGI VRMVTGDNINTAKAIARECGILT++G+AIEGPEFREKS +EL
Sbjct: 661 VRPGVRESVATCRSAGIMVRMVTGDNINTAKAIARECGILTEDGLAIEGPEFREKSLDEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPKIQVMARSSP+DKHTLVKHLRTT EVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 721 LKLIPKIQVMARSSPLDKHTLVKHLRTTFNEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIVTVAKWGRSVY+NIQKFVQFQLTVNVVAL+VNFSSAC TGN
Sbjct: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALLVNFSSACFTGN 840
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPPN DLMKR PVGR G FI+NVMWRNILGQS YQ
Sbjct: 841 APLTAVQLLWVNMIMDTLGALALATEPPNDDLMKREPVGRTGKFITNVMWRNILGQSFYQ 900
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQL 939
F+++WYLQT+GK++F LDGPD +++LNT+IFN+FVFCQ+
Sbjct: 901 FIVMWYLQTQGKSMFGLDGPDAEVVLNTIIFNSFVFCQV 939
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O64806|ACA7_ARATH Putative calcium-transporting ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=ACA7 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 1503 bits (3892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 743/951 (78%), Positives = 840/951 (88%), Gaps = 6/951 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLN NF DVKAK++SEE L++WR LC VKN KRRFRFTANLSKR+EA A+RR+NQE
Sbjct: 1 MESYLNSNF-DVKAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K R+AVLVS+AA QFI G++ S+Y VPEEV A+GF IC DELGSIVEGHD+KKLK HGG
Sbjct: 60 KLRIAVLVSKAAFQFISGVS-PSDYKVPEEVKAAGFDICADELGSIVEGHDVKKLKFHGG 118
Query: 121 VEGIAEKLSTSITDGISTSE-HLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
V+G++ KL G+ST E L++R+E++GINKF ES R FWV+VWEAL DMTLMIL
Sbjct: 119 VDGLSGKLKACPNAGLSTGEPEQLSKRQELFGINKFAESELRSFWVFVWEALQDMTLMIL 178
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
VCA VSL+VGIATEGWP+G+HDGLGIV SILLVVFVTATSDY+QSLQF+DLD+EKKKIT
Sbjct: 179 GVCAFVSLIVGIATEGWPQGSHDGLGIVASILLVVFVTATSDYRQSLQFRDLDKEKKKIT 238
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN 299
VQV RNGFR+K+SIYDLLPGD+VHL +GDQVPADGLF+SGFSV+I+ESSLTGESEPV V
Sbjct: 239 VQVTRNGFRQKMSIYDLLPGDVVHLAIGDQVPADGLFLSGFSVVIDESSLTGESEPVMVT 298
Query: 300 ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359
A NPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK
Sbjct: 299 AQNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 358
Query: 360 IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419
IGL FA+VTFAV+VQG+F RKL G HW WSGDDALE+LE+FAIAVTIVVVAVPEGLPLA
Sbjct: 359 IGLSFAIVTFAVLVQGMFMRKLSLGPHWWWSGDDALELLEYFAIAVTIVVVAVPEGLPLA 418
Query: 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479
VTLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K+CIC +++
Sbjct: 419 VTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCICMNVQD 478
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
V + + + S IP +A KLLLQ IFNNTGGEVV+ E KTEILGTPTETAILE GL L
Sbjct: 479 V--ASKSSSLQSDIPEAALKLLLQLIFNNTGGEVVVNERGKTEILGTPTETAILELGLSL 536
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSN 598
GG FQ ERQ++K++KVEPFNS KK+MGVVIELPEGG R H KGASEI+LAACDK +NS+
Sbjct: 537 GGKFQEERQSNKVIKVEPFNSTKKRMGVVIELPEGGRIRAHTKGASEIVLAACDKVINSS 596
Query: 599 GEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIK 658
GEVVPL++ ++ LN TI++FA+EALRTLCLA M+I + FSAD IP +G+TCIGIVGIK
Sbjct: 597 GEVVPLDDESIKFLNVTIDEFANEALRTLCLAYMDIESGFSADEGIPEKGFTCIGIVGIK 656
Query: 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718
DP+RPGV+ESV +CR AGI VRMVTGDNINTAKAIARECGILTD+GIAIEGP FREK+ E
Sbjct: 657 DPVRPGVRESVELCRRAGIMVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKNQE 716
Query: 719 ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778
E+ +LIPKIQVMARSSPMDKHTLVK LRTT EVVAVTGDGTNDAPALHEADIGLAMGIA
Sbjct: 717 EMLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIA 776
Query: 779 GTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 838
GTEVAKE ADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT
Sbjct: 777 GTEVAKEIADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 836
Query: 839 GNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSL 898
G+APLTAVQLLWVNMIMDTLGALALATEPPN +LMKR PVGR+GNFI+N MWRNILGQ++
Sbjct: 837 GSAPLTAVQLLWVNMIMDTLGALALATEPPNNELMKRMPVGRRGNFITNAMWRNILGQAV 896
Query: 899 YQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949
YQF+IIW LQ +GK++F L G D L+LNTLIFN FVFCQ+ + + ++
Sbjct: 897 YQFIIIWILQAKGKSMFGLVGSDSTLVLNTLIFNCFVFCQVFNEVSSREME 947
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q6ATV4|ACA2_ORYSJ Calcium-transporting ATPase 2, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os03g0616400 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1303 bits (3371), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/885 (72%), Positives = 749/885 (84%), Gaps = 1/885 (0%)
Query: 55 RRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKK 114
R S+ EK +VA L S+A L+F HG++L S Y VPE+V A+GFQI DEL SIVE D KK
Sbjct: 60 RASHHEKLQVAALPSKATLEFEHGVSLRSAYIVPEDVQAAGFQIDADELASIVESRDTKK 119
Query: 115 LKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDM 174
L VHG + GIA+KL TS+T+GI T + LLN+R++IYG+NKF E+ R FW +VWEAL D
Sbjct: 120 LTVHGQLNGIADKLGTSLTNGIVTDKDLLNQRQDIYGVNKFAETEIRSFWEFVWEALEDT 179
Query: 175 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDRE 234
TL+IL+ CA+ SLVVGI TEGWP+GAHDG+GIV SILLVV VT TS+Y+QSLQF+DLD+E
Sbjct: 180 TLIILSACAIFSLVVGITTEGWPQGAHDGVGIVASILLVVSVTGTSNYQQSLQFRDLDKE 239
Query: 235 KKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 294
K+KI VQV RNG R+++ I DLLPGD VHL +GDQVPADGLF+SGFSVL++ESSLTGESE
Sbjct: 240 KRKILVQVTRNGLRQRVLIDDLLPGDAVHLAVGDQVPADGLFISGFSVLVDESSLTGESE 299
Query: 295 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 354
PV VN NP+LLSGTKV +GSCKMLVT VGMRTQWGKLMA L++GGDDETPLQ +LNGVA
Sbjct: 300 PVFVNEDNPYLLSGTKVLDGSCKMLVTAVGMRTQWGKLMAVLTDGGDDETPLQTRLNGVA 359
Query: 355 TIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPE 414
IGKIGLFFAV+TF V+ QG+ +K +G +WSGDD LEIL+ FA+AVTIVVVAVPE
Sbjct: 360 NTIGKIGLFFAVLTFIVLSQGIIGQKYLDGLLLSWSGDDVLEILDHFAVAVTIVVVAVPE 419
Query: 415 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACIC 474
GLPLAVTLSLAFAMKKMMNDKALVR LAACETMGSAT ICSDKTGTLTTN MTV+KACIC
Sbjct: 420 GLPLAVTLSLAFAMKKMMNDKALVRQLAACETMGSATVICSDKTGTLTTNRMTVVKACIC 479
Query: 475 EEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 534
+V+N + TP S+ P A + LL+SIFNNT GEVV + K +ILGTPTETA+LE
Sbjct: 480 GNTIQVNNPQ-TPNMSSNFPEVAVETLLESIFNNTSGEVVTNQDGKYQILGTPTETALLE 538
Query: 535 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKF 594
F LLL GD + ++ SKIVKVEPFNS KK+M ++ELP GG+R HCKGASEI+LAACDKF
Sbjct: 539 FALLLDGDCKEKQLGSKIVKVEPFNSTKKRMSTILELPGGGYRAHCKGASEIVLAACDKF 598
Query: 595 LNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGI 654
++ G +VPL++ + LN+ I+ F+SEALRTLCLA E+ FS IP +GYTCIGI
Sbjct: 599 IDERGCIVPLDDKTSSKLNDIIKAFSSEALRTLCLAYREMEEGFSTQEQIPLQGYTCIGI 658
Query: 655 VGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFRE 714
VGIKDP+RPGV++SVA CRSAGI+VRM+TGDNI+TAKAIARECGILT +GIAIEG EFRE
Sbjct: 659 VGIKDPVRPGVRQSVATCRSAGISVRMITGDNIDTAKAIARECGILTKDGIAIEGAEFRE 718
Query: 715 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774
KS EEL LIPK+QV+ARSSP+DKHTLVKHLRT EVVAVTGDGTNDAPAL EADIGLA
Sbjct: 719 KSAEELHDLIPKMQVLARSSPLDKHTLVKHLRTAFNEVVAVTGDGTNDAPALREADIGLA 778
Query: 775 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 834
MGIAGTEVAKESADV+ILDDNFSTIVTVAKWGRSVY+NIQKFVQFQLTVNVVAL+VNF+S
Sbjct: 779 MGIAGTEVAKESADVVILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALLVNFTS 838
Query: 835 ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNIL 894
AC TG+APLTAVQLLWVNMIMDTLGALALATEPPN +LMK++PVGRKG FI+NVMWRNI+
Sbjct: 839 ACFTGDAPLTAVQLLWVNMIMDTLGALALATEPPNNNLMKKAPVGRKGKFITNVMWRNIV 898
Query: 895 GQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQL 939
GQSLYQF ++WYLQT+GK +F L+G D++LNT+IFNTFVFCQ+
Sbjct: 899 GQSLYQFAVMWYLQTQGKHLFGLEGYHADIVLNTIIFNTFVFCQV 943
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1202 bits (3111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/939 (63%), Positives = 731/939 (77%), Gaps = 12/939 (1%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
M N L + +V +KN S EA QRWR G VKNR RRFR +NL K E E R QE
Sbjct: 1 MSNLLKD--FEVASKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAENEKKRCQIQE 58
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RV V +AA QFI EY + +EV +GF + DEL S+V HD K L GG
Sbjct: 59 KIRVVFYVQKAAFQFIDA-GARPEYKLTDEVKKAGFYVEADELASMVRNHDTKSLTKIGG 117
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EGIA+K+S S+ +G+ +SE L+ R++IYG N++TE PAR F +VWEAL D+TL+IL
Sbjct: 118 PEGIAQKVSVSLAEGVRSSE--LHIREKIYGENRYTEKPARSFLTFVWEALQDITLIILM 175
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA+VS+ VG+ATEG+PKG +DG GI++SI+LVV VTA SDYKQSLQF+DLDREKKKI +
Sbjct: 176 VCAVVSIGVGVATEGFPKGMYDGTGILLSIILVVMVTAISDYKQSLQFRDLDREKKKIII 235
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+G R+++SI+DL+ GD+VHL +GDQVPADG+F+SG+++ I+ESSL+GESEP +VN
Sbjct: 236 QVTRDGSRQEVSIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNK 295
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
PFLLSGTKVQNGS KMLVTTVGMRT+WGKLM TLSEGG+DETPLQVKLNGVATIIGKI
Sbjct: 296 EKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMDTLSEGGEDETPLQVKLNGVATIIGKI 355
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GL FAV+TF V+ K G+ WS +DAL +L++FAIAVTI+VVAVPEGLPLAV
Sbjct: 356 GLGFAVLTFVVLCIRFVVEKATAGSITEWSSEDALTLLDYFAIAVTIIVVAVPEGLPLAV 415
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMK++M+D+ALVRHLAACETMGS+T IC+DKTGTLTTNHM V K ICE IKE
Sbjct: 416 TLSLAFAMKQLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICENIKE- 474
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F ++ +L+Q+IF NTG EVV + KT+ILG+PTE AILEFGLLLG
Sbjct: 475 ---RQEENFQLNLSEQVKNILIQAIFQNTGSEVVKDKEGKTQILGSPTERAILEFGLLLG 531
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GD +R+ KI+K+EPFNS KK+M V+ G R CKGASEI+L C+K ++SNGE
Sbjct: 532 GDVDTQRREHKILKIEPFNSDKKKMSVLTSHSGGKVRAFCKGASEIVLKMCEKVVDSNGE 591
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VPL+E + +++ IE FASEALRTLCL ++ D +P GYT + +VGIKDP
Sbjct: 592 SVPLSEEKIASISDVIEGFASEALRTLCLVYTDLDEAPRGD--LPNGGYTLVAVVGIKDP 649
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+E+V C++AGITVRMVTGDNI+TAKAIA+ECGILT G+AIEG +FR E+
Sbjct: 650 VRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGILTAGGVAIEGSDFRNLPPHEM 709
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
++PKIQVMARS P+DKHTLV +LR +GEVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 710 RAILPKIQVMARSLPLDKHTLVNNLR-KMGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 768
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKE+ADVII+DDNF+TIV VAKWGR+VYINIQKFVQFQLTVNVVALI+NF SAC+TG+
Sbjct: 769 EVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLTVNVVALIINFVSACITGS 828
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPPN LMKR P+GR +FI+ MWRNI+GQS+YQ
Sbjct: 829 APLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRQPIGRTASFITRAMWRNIIGQSIYQ 888
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQL 939
+++ L GK + L+GPD ++LNT+IFN+FVFCQ+
Sbjct: 889 LIVLGILNFAGKQILNLNGPDSTIVLNTIIFNSFVFCQV 927
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1199 bits (3101), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/940 (63%), Positives = 738/940 (78%), Gaps = 11/940 (1%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
M N L + +V+AKN S EA QRWR VKNR RRFR +L K + E + QE
Sbjct: 1 MSNLLRD--FEVEAKNPSLEARQRWRSSVSIVKNRTRRFRNIRDLDKLADYENKKHQIQE 58
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RVA V +AAL FI EY + +EV +GF I DEL S+V +D K L GG
Sbjct: 59 KIRVAFFVQKAALHFIDAAA-RPEYKLTDEVKKAGFSIEADELASMVRKNDTKSLAQKGG 117
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
VE +A+K+S S+++GI +SE + R++I+G N++TE PAR F ++VWEALHD+TL+IL
Sbjct: 118 VEELAKKVSVSLSEGIRSSE--VPIREKIFGENRYTEKPARSFLMFVWEALHDITLIILM 175
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA+VS+ VG+ATEG+P+G +DG GI++SILLVV VTA SDYKQSLQF+DLDREKKKI V
Sbjct: 176 VCAVVSIGVGVATEGFPRGMYDGTGILLSILLVVMVTAISDYKQSLQFRDLDREKKKIIV 235
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+G R++ISI+DL+ GD+VHL +GDQVPADG+F+SG+++ I+ESSL+GESEP +VN
Sbjct: 236 QVTRDGSRQEISIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNK 295
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
PFLLSGTKVQNGS KMLVTTVGMRT+WGKLM TL +GG+DETPLQVKLNGVATIIGKI
Sbjct: 296 EKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMETLVDGGEDETPLQVKLNGVATIIGKI 355
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GL FAV+TF V+ K G+ WS +DAL +L++FAI+VTI+VVAVPEGLPLAV
Sbjct: 356 GLSFAVLTFVVLCIRFVLDKATSGSFTNWSSEDALTLLDYFAISVTIIVVAVPEGLPLAV 415
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE- 479
TLSLAFAMKK+M+D+ALVRHLAACETMGS+T IC+DKTGTLTTNHM V K IC++++E
Sbjct: 416 TLSLAFAMKKLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICDKVQER 475
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
+ SK + S ++ LLQ IF NTG EVV + T+ILG+PTE AILEFGLLL
Sbjct: 476 QEGSKESFELELSEEVQST--LLQGIFQNTGSEVVKDKDGNTQILGSPTERAILEFGLLL 533
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNG 599
GGDF +R+ KI+K+EPFNS KK+M V+I LP GG R CKGASEI+L C+ ++SNG
Sbjct: 534 GGDFNTQRKEHKILKIEPFNSDKKKMSVLIALPGGGARAFCKGASEIVLKMCENVVDSNG 593
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
E VPL E + +++ IE FASEALRTLCL ++ S + +P GYT + +VGIKD
Sbjct: 594 ESVPLTEERITSISDIIEGFASEALRTLCLVYKDLDEAPSGE--LPDGGYTMVAVVGIKD 651
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGV+E+V C++AGITVRMVTGDNI+TAKAIA+ECGI T+ G+AIEG EFR+ S E
Sbjct: 652 PVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGIYTEGGLAIEGSEFRDLSPHE 711
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
+ +IPKIQVMARS P+DKHTLV +LR +GEVVAVTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 712 MRAIIPKIQVMARSLPLDKHTLVSNLR-KIGEVVAVTGDGTNDAPALHEADIGLAMGIAG 770
Query: 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
TEVAKE+ADVII+DDNF TIV VA+WGR+VYINIQKFVQFQLTVNVVALI+NF SAC+TG
Sbjct: 771 TEVAKENADVIIMDDNFKTIVNVARWGRAVYINIQKFVQFQLTVNVVALIINFVSACITG 830
Query: 840 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLY 899
+APLTAVQLLWVNMIMDTLGALALATEPPN LMKR+P+ R +FI+ MWRNI GQS+Y
Sbjct: 831 SAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRAPIARTASFITKTMWRNIAGQSVY 890
Query: 900 QFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQL 939
Q +++ L GK++ +LDGPD +LNT+IFN+FVFCQ+
Sbjct: 891 QLIVLGILNFAGKSLLKLDGPDSTAVLNTVIFNSFVFCQV 930
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into small vacuoles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QY12|ACA4_ORYSJ Probable calcium-transporting ATPase 4, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1189 bits (3076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/950 (63%), Positives = 730/950 (76%), Gaps = 5/950 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCG-FVKNRKRRFRFTANLSKRFEAEAIRRSNQ 59
++ YL ENF DV AKN SEEA +RWR+ G VKNR+RRFR+ +L +R +A RS Q
Sbjct: 4 LDRYLQENF-DVPAKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLERRSLDKAKVRSTQ 62
Query: 60 EKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHG 119
EK RVA+ V QAAL F G EY + ++ +G+ I PDEL I HD K LK+HG
Sbjct: 63 EKIRVALYVQQAALIFSDGAK-KKEYKLTGDIIKAGYAINPDELALITSKHDSKALKMHG 121
Query: 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
GV+GI+ K+ +S GI SE L+ R+ IYG+N++ E P+R FW++VW+AL DMTL+IL
Sbjct: 122 GVDGISIKVRSSFDHGIYASE--LDTRQNIYGVNRYAEKPSRSFWMFVWDALQDMTLIIL 179
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
VCAL+S+ VG+ATEGWPKG +DGLGI++SI LVV VTA SDYKQSLQFK+LD EKKKI
Sbjct: 180 MVCALLSVAVGLATEGWPKGMYDGLGIILSIFLVVMVTAVSDYKQSLQFKELDNEKKKIF 239
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN 299
+ V R+G R+KISIYDL+ GDIVHL +GDQVPADGL++ G+S+LI+ESSL+GES+PV V+
Sbjct: 240 IHVTRDGRRQKISIYDLVVGDIVHLSIGDQVPADGLYIHGYSLLIDESSLSGESDPVYVS 299
Query: 300 ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359
PF+L+GTKVQ+GS KM+VT VGMRT+WGKLM+TLSEGG+DETPLQVKLNGVATIIGK
Sbjct: 300 QDKPFILAGTKVQDGSAKMIVTAVGMRTEWGKLMSTLSEGGEDETPLQVKLNGVATIIGK 359
Query: 360 IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419
IGL FA++TF V++ K W DAL I+ +FA AVTI+VVAVPEGLPLA
Sbjct: 360 IGLVFAILTFLVLLVRFLIDKGMTVGLLKWYSTDALTIVNYFATAVTIIVVAVPEGLPLA 419
Query: 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479
VTLSLAFAMKK+MNDKALVRHL+ACETMGSA +IC+DKTGTLTTNHM V K I E K
Sbjct: 420 VTLSLAFAMKKLMNDKALVRHLSACETMGSAGTICTDKTGTLTTNHMVVDKIWISEVSKS 479
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
V ++ + S + +S LLLQ IF NT EVV + K +LGTPTE AILEFGL L
Sbjct: 480 VTSNTISGELNSVVSSSTLSLLLQGIFENTSAEVVKEKDGKQTVLGTPTERAILEFGLGL 539
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNG 599
GD AE +A VKVEPFNSVKK+M V+I LP G R CKGASEIIL CD ++ +G
Sbjct: 540 KGDHDAEYRACTKVKVEPFNSVKKKMAVLISLPNGTSRWFCKGASEIILQMCDMMVDGDG 599
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
+PL+EA ++ +TI FAS+ALRTLCLA E+ ++ +A PT G+T I I GIKD
Sbjct: 600 NAIPLSEAQRKNILDTINSFASDALRTLCLAYKEVDDDIDDNADSPTSGFTLIAIFGIKD 659
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGVK++V C SAGITVRMVTGDNINTAKAIA+ECGILT++G+AIEGPEF KS EE
Sbjct: 660 PVRPGVKDAVKTCMSAGITVRMVTGDNINTAKAIAKECGILTEDGVAIEGPEFHSKSTEE 719
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
+ LI IQVMARS P+DKHTLV +LR EVV+VTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 720 MRDLILNIQVMARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAG 779
Query: 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
TEVAKESADVI+LDDNF+TI+ VA+WGR+VYINIQKFVQFQLTVN+VAL++NF SAC+ G
Sbjct: 780 TEVAKESADVIVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACIIG 839
Query: 840 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLY 899
+APLTAVQLLWVNMIMDTLGALALATEPPN ++MKR PV + +FI+ MWRNI+GQSLY
Sbjct: 840 SAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRKGESFITKFMWRNIMGQSLY 899
Query: 900 QFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949
Q ++ L G+ + + G D I+NTLIFN+FVFCQ+ + + +Q
Sbjct: 900 QLFVLGALMFGGERLLNIKGADSKSIINTLIFNSFVFCQVFNEINSREMQ 949
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1176 bits (3042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/950 (62%), Positives = 720/950 (75%), Gaps = 27/950 (2%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCG-FVKNRKRRFRFTANLSKRFEAEAIRRSNQ 59
++ YL E+F DV AKN SEEA +RWR+ G VKNR+RRFR+ +L +R +A RS Q
Sbjct: 4 LDRYLQEHF-DVPAKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLDRRSLDKAKVRSTQ 62
Query: 60 EKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHG 119
EK RVA+ V QAAL F DEL I HD K LK+HG
Sbjct: 63 EKIRVALYVQQAALIF-----------------------SDDELALITSKHDSKALKMHG 99
Query: 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
GV+GI++K+ +S GI S+ L+ R+ IYG+N++ E P+R FW++VW+A DMTL+IL
Sbjct: 100 GVDGISKKVRSSFDHGICASD--LDTRQNIYGVNRYAEKPSRSFWMFVWDAFQDMTLIIL 157
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
VCAL+S+ VG+ATEGWPKG +DGLGI++SI LVV VTA SDYKQSLQFK+LD EKKKI
Sbjct: 158 MVCALLSVAVGLATEGWPKGMYDGLGIILSIFLVVMVTAVSDYKQSLQFKELDNEKKKIF 217
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN 299
+ V R+G R+KISIYDL+ GDIVHL +GDQVPADGL++ G+S+LI+ESSL+GES+PV V+
Sbjct: 218 IHVTRDGRRQKISIYDLVVGDIVHLSIGDQVPADGLYIHGYSLLIDESSLSGESDPVYVS 277
Query: 300 ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359
PF+L+GTKVQ+GS KM+VT VGMRT+WGKLM+TLSEGG+DETPLQVKLNGVAT+IGK
Sbjct: 278 QDKPFILAGTKVQDGSAKMIVTAVGMRTEWGKLMSTLSEGGEDETPLQVKLNGVATVIGK 337
Query: 360 IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419
IGL FA++TF V++ K W DAL I+ +FA AVTI+VVAVPEGLPLA
Sbjct: 338 IGLVFAILTFLVLLVRFLIDKGMTVGLLKWYSTDALTIVNYFATAVTIIVVAVPEGLPLA 397
Query: 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479
VTLSLAFAMKK+MNDKALVRHL+ACETMGSA +IC+DKTGTLTTN+M V K I E K
Sbjct: 398 VTLSLAFAMKKLMNDKALVRHLSACETMGSAGTICTDKTGTLTTNYMVVDKIWISEVSKS 457
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
V ++ + S + + LLLQ IF NT EVV + K +LGTPTE AILEFGL L
Sbjct: 458 VTSNTISGELNSVVSSRTLSLLLQGIFENTSAEVVKEKDGKQTVLGTPTERAILEFGLGL 517
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNG 599
G AE A VKVEPFNSVKK+M V+I LP G R CKGASEIIL CD ++ +G
Sbjct: 518 EGVHDAEYSACTKVKVEPFNSVKKKMAVLISLPSGTSRWFCKGASEIILQMCDMMVDGDG 577
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
+PL+EA ++ +TI FAS+ALRTLCLA E+ ++ +A PT G+T I I GIKD
Sbjct: 578 NAIPLSEAQRKNILDTINSFASDALRTLCLAYKEVDDDIDDNADSPTSGFTLIAIFGIKD 637
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGVK++V C SAGITVRMVTGDNINTAKAIA+ECGILT++G+AIEGPEF KS EE
Sbjct: 638 PVRPGVKDAVKTCMSAGITVRMVTGDNINTAKAIAKECGILTEDGVAIEGPEFHSKSPEE 697
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
+ LIP IQVMARS P+DKHTLV +LR EVV+VTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 698 MRDLIPNIQVMARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAG 757
Query: 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
TEVAKESADVI+LDDNF+TI+ VA+WGR+VYINIQKFVQFQLTVN+VAL++NF SAC+TG
Sbjct: 758 TEVAKESADVIVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITG 817
Query: 840 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLY 899
+APLTAVQLLWVNMIMDTLGALALATEPPN ++MKR PV + +FI+ VMWRNI+GQSLY
Sbjct: 818 SAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRKGESFITKVMWRNIMGQSLY 877
Query: 900 QFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949
Q ++ L G+++ + G D I+NTLIFN+FVFCQ+ + + +Q
Sbjct: 878 QLFVLGALMFGGESLLNIKGADSKSIINTLIFNSFVFCQVFNEINSREMQ 927
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q8RUN1|ACA3_ORYSJ Calcium-transporting ATPase 3, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os01g0939100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1140 bits (2949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/933 (62%), Positives = 714/933 (76%), Gaps = 10/933 (1%)
Query: 11 DVKAKNTSEEALQRWRKLCG-FVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVS 69
+V AKN SEEA +RWR G VKNR+RRFR +L KR +AE RR QEK RVA+ V
Sbjct: 16 EVPAKNPSEEAQRRWRDAVGTLVKNRRRRFRMVPDLDKRSQAETQRRKIQEKLRVALFVQ 75
Query: 70 QAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIAEKLS 129
+AALQFI + +E+ +PE GF + +EL SIV GHD K L+ H GV+GIA K++
Sbjct: 76 KAALQFIDAVR-KTEHPLPELARQCGFSVSAEELASIVRGHDTKSLRFHNGVDGIARKVA 134
Query: 130 TSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVV 189
S+ DG+ + + L R E+YG N++TE P R FW+++W+A DMTL++LA CA VS+ +
Sbjct: 135 VSLADGVKSDDAGL--RAEVYGANQYTEKPPRTFWMFLWDASQDMTLLLLAFCAAVSVAI 192
Query: 190 GIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRR 249
G+ATEGWP G +DG+GI+++ILLVV +TA SDYKQSLQF+DLD+EKKKI VQV R+G+R+
Sbjct: 193 GLATEGWPSGMYDGVGIMLTILLVVMITAASDYKQSLQFRDLDKEKKKIDVQVTRDGYRQ 252
Query: 250 KISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGT 309
K+SIYD++ GDIVHL +GDQVPADGLF+ G+S +++ES+L+GESEPV+V+ N FLL GT
Sbjct: 253 KVSIYDIVVGDIVHLSIGDQVPADGLFIDGYSFVVDESNLSGESEPVHVSTANRFLLGGT 312
Query: 310 KVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTF 369
KVQ+GS +MLVT VGMRT+WG LM TLS+GG+DETPLQVKLNGVATIIGKIGL FAV+TF
Sbjct: 313 KVQDGSARMLVTAVGMRTEWGNLMETLSQGGEDETPLQVKLNGVATIIGKIGLAFAVLTF 372
Query: 370 AV-MVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAM 428
V M + L + G W DAL +L FFA+AVTI+VVAVPEGLPLAVTLSLAFAM
Sbjct: 373 TVLMARFLLGKAGAPGGLLRWRMVDALAVLNFFAVAVTIIVVAVPEGLPLAVTLSLAFAM 432
Query: 429 KKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPA 488
KK+M ++ALVRHL+ACETMGSA+ IC+DKTGTLTTNHM V K + + N+KG
Sbjct: 433 KKLMQERALVRHLSACETMGSASCICTDKTGTLTTNHMVVEKIWASGAAQTMSNAKGFDQ 492
Query: 489 FGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQ 548
SS+ + +K+LL+ +F+ +G EVV G+ + I+GTPTETAILEFGL + + E
Sbjct: 493 LTSSMSETFAKVLLEGVFHCSGSEVVRGKDGRHTIMGTPTETAILEFGLAVEKRARIEHT 552
Query: 549 ASKIVKVEPFNSVKKQMGVVIELPEGGFR--VHCKGASEIILAACDKFLNSNGEVVPLNE 606
+ +KVEPFNSVKK M VVI P G R KGASE++L+ C L+ G V L +
Sbjct: 553 GAGKLKVEPFNSVKKTMAVVIASPSAGGRPRAFLKGASEVVLSRCSLVLDGTGNVEKLTD 612
Query: 607 AAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVK 666
A + I+ FA EALRTLCLA ++ EGYT I + GIKDP+RPGV+
Sbjct: 613 AKAKRVASAIDAFACEALRTLCLAYQDVDGGGGDIP---GEGYTLIAVFGIKDPLRPGVR 669
Query: 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK 726
E+VA C +AGI VRMVTGDNINTAKAIARECGILTD+GIAIEGPEFR K +++ ++IPK
Sbjct: 670 EAVATCHAAGINVRMVTGDNINTAKAIARECGILTDDGIAIEGPEFRNKDPDQMREIIPK 729
Query: 727 IQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES 786
IQVMARS P+DKHTLV +LR EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKE+
Sbjct: 730 IQVMARSLPLDKHTLVTNLRGMFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKEN 789
Query: 787 ADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAV 846
ADVII+DDNFSTI+ VAKWGRSVYINIQKFVQFQLTVNVVAL+VNF SA TG+APLT V
Sbjct: 790 ADVIIMDDNFSTIINVAKWGRSVYINIQKFVQFQLTVNVVALMVNFISASFTGSAPLTIV 849
Query: 847 QLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWY 906
QLLWVN+IMDTLGALALATEPPN +MKR PVGR NFI+ VMWRNI+GQS+YQ +++
Sbjct: 850 QLLWVNLIMDTLGALALATEPPNDAMMKRPPVGRGDNFITKVMWRNIVGQSIYQLVVLGV 909
Query: 907 LQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQL 939
L RGK++ +++GP D +LNT +FNTFVFCQ+
Sbjct: 910 LLLRGKSLLQINGPQADSLLNTFVFNTFVFCQV 942
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 991 | ||||||
| 224127276 | 1020 | predicted protein [Populus trichocarpa] | 0.947 | 0.920 | 0.863 | 0.0 | |
| 289540885 | 1019 | calcium ATPase [Trifolium repens] | 0.946 | 0.920 | 0.846 | 0.0 | |
| 351720666 | 1019 | plasma membrane Ca2+-ATPase [Glycine max | 0.946 | 0.920 | 0.845 | 0.0 | |
| 297851218 | 1020 | autoinhibited Ca2+-ATPase 1 [Arabidopsis | 0.957 | 0.930 | 0.826 | 0.0 | |
| 225458828 | 1018 | PREDICTED: calcium-transporting ATPase 1 | 0.955 | 0.930 | 0.841 | 0.0 | |
| 356510560 | 1019 | PREDICTED: calcium-transporting ATPase 1 | 0.946 | 0.920 | 0.844 | 0.0 | |
| 225438996 | 1019 | PREDICTED: calcium-transporting ATPase 2 | 0.956 | 0.930 | 0.819 | 0.0 | |
| 30690083 | 1020 | autoinhibited Ca2+-ATPase 1 [Arabidopsis | 0.947 | 0.920 | 0.828 | 0.0 | |
| 516118 | 1020 | envelope Ca2+-ATPase [Arabidopsis thalia | 0.947 | 0.920 | 0.827 | 0.0 | |
| 509810 | 1020 | envelope Ca2+-ATPase [Arabidopsis thalia | 0.947 | 0.920 | 0.826 | 0.0 |
| >gi|224127276|ref|XP_002320033.1| predicted protein [Populus trichocarpa] gi|222860806|gb|EEE98348.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1637 bits (4239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 811/939 (86%), Positives = 877/939 (93%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
MENYLNENF DVKAKN+S+EALQRWRKLC VKNRKRRFRFTANLSKRFEAEAIRRSNQE
Sbjct: 1 MENYLNENFGDVKAKNSSDEALQRWRKLCWLVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RVAVLVS+AALQFIH LNLSS+Y VP+EV +GFQIC DELGSIVEGHD+KKLK+HG
Sbjct: 61 KLRVAVLVSKAALQFIHCLNLSSDYVVPKEVEEAGFQICADELGSIVEGHDVKKLKIHGE 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
VEGIAEKLSTSI DGISTSE L+N RKEIYGINKFTESP RGF V+VWEAL DMTLMIL
Sbjct: 121 VEGIAEKLSTSINDGISTSEDLVNGRKEIYGINKFTESPPRGFLVFVWEALQDMTLMILG 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCALVSL+VGIA EGWPKG+HDGLGIV SILLVVFVTATSDYKQSLQFKDLDREKKKITV
Sbjct: 181 VCALVSLIVGIAMEGWPKGSHDGLGIVASILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RN R+KISIYDLLPGDIVHL +GDQVPADGLFVSGFSVLINESSLTGESEPVNVNA
Sbjct: 241 QVTRNAVRQKISIYDLLPGDIVHLFIGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 ANPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAVVTFAV+VQGL RKL+EGTHW WSGDDA E+LEFFA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVVTFAVLVQGLCNRKLREGTHWIWSGDDAREMLEFFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGS+T+ICSDKTGTLTTNHMTV+KAC+ E +EV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSSTTICSDKTGTLTTNHMTVVKACVSGETREV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+S+ T +FGS+IP A +LL+SIFNNTGGEVV+ E K +ILGTPTETA+LEFGLLLG
Sbjct: 481 GSSESTTSFGSAIPDLAKSVLLESIFNNTGGEVVVNEERKVQILGTPTETALLEFGLLLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GD + +++ SKIVKVEPFNS KK+MGVVIELP GGFR HCKGASEI+LAACDK ++SNG
Sbjct: 541 GDSRQKQEKSKIVKVEPFNSTKKRMGVVIELPNGGFRAHCKGASEIVLAACDKVIDSNGV 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+EA++NHLN+TIE+FASE+LRTLCLA +EIGNE+S ++PIP++GYTCI IVGIKDP
Sbjct: 601 VVPLDEASINHLNDTIERFASESLRTLCLAYLEIGNEYSDESPIPSKGYTCIAIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAICRSAGI VRMVTGDN+ TAKAIARECGILTD+GIAIEGP FREKS+EEL
Sbjct: 661 VRPGVKESVAICRSAGIVVRMVTGDNLTTAKAIARECGILTDDGIAIEGPAFREKSEEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
+LIPKIQVMARSSP+DKH LV+HLRTT EVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 721 QELIPKIQVMARSSPLDKHALVRHLRTTFQEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN
Sbjct: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPPN DLMKRSPVGRKGNFISNVMWRNILGQSLYQ
Sbjct: 841 APLTAVQLLWVNMIMDTLGALALATEPPNDDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQL 939
F++IWYLQTRGKAVFR+DGPD DLILNTLIFN+FVFCQ+
Sbjct: 901 FVVIWYLQTRGKAVFRIDGPDSDLILNTLIFNSFVFCQV 939
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|289540885|gb|ADD09562.1| calcium ATPase [Trifolium repens] | Back alignment and taxonomy information |
|---|
Score = 1628 bits (4217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 795/939 (84%), Positives = 866/939 (92%), Gaps = 1/939 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLN+NF DVK KN+SEEALQRWRKLC VKNRKRRFRFTANLSKRFEAEAIRRSNQE
Sbjct: 1 MESYLNDNFGDVKPKNSSEEALQRWRKLCWVVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFIHGL LSSEY VPEEV A+GF+IC DE GSIV+G D+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFIHGLRLSSEYKVPEEVKAAGFEICADEAGSIVDGRDVKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
+EGI +KLS+S+ DGISTSE LLNRRKEIYGINKFTESPARGFWV+VWEAL D TLMILA
Sbjct: 121 IEGITDKLSSSVNDGISTSESLLNRRKEIYGINKFTESPARGFWVFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA VSL VGI EGWPKGA DG+GIV SILLVVFVTATSDY+QSLQFKDLD+EKKKITV
Sbjct: 181 VCAFVSLAVGIIMEGWPKGAQDGIGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKITV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RNG+R+KISIYDLLPGDIVHL +GDQVPADGLF+SGFSV INESSLTGESEPVNV+
Sbjct: 241 QVTRNGYRQKISIYDLLPGDIVHLNIGDQVPADGLFLSGFSVCINESSLTGESEPVNVSD 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
LNPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 LNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAVVTF+V+VQGLF+RKLQEG+ WTWSGDDA+E++EFFAIAVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVVTFSVLVQGLFSRKLQEGSQWTWSGDDAMELVEFFAIAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+KACIC +IKEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACICGKIKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
NS T F +P SA +LL+SIFNNTGGEVV E K EILG+PTETAILEFGL LG
Sbjct: 481 KNSTDTSDFSFDVPDSAIAILLESIFNNTGGEVVKNENGKIEILGSPTETAILEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDF ERQ SK+VKVEPFNS+KK+MGVV++LP+GG+R HCKGASEIILAACDKF++ NGE
Sbjct: 541 GDFHKERQVSKLVKVEPFNSIKKRMGVVLQLPDGGYRAHCKGASEIILAACDKFVDKNGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E ++ HLN+TIEKFA+EALRTLCLA ++I +EF +PIP +GYTCIGIVGIKDP
Sbjct: 601 VVPLDEDSIRHLNDTIEKFANEALRTLCLAYVDIHDEFLVGSPIPIDGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+ESVAICR+AGITVRMVTGDNINTAKAIARECGILTD GIAIEGPEFRE S+E+L
Sbjct: 661 VRPGVRESVAICRAAGITVRMVTGDNINTAKAIARECGILTD-GIAIEGPEFREMSEEKL 719
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
+IPKIQVMARSSPMDKHTLVK LRTT EVV+VTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 720 LDIIPKIQVMARSSPMDKHTLVKQLRTTFEEVVSVTGDGTNDAPALHEADIGLAMGIAGT 779
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF+SACLTGN
Sbjct: 780 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFTSACLTGN 839
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPPN +LMKR PVGRKGNFI+NVMWRNI GQS+YQ
Sbjct: 840 APLTAVQLLWVNMIMDTLGALALATEPPNDELMKRPPVGRKGNFITNVMWRNITGQSIYQ 899
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQL 939
F++IW LQTRGK F +DGPD DLILNTLIFN+FVF Q+
Sbjct: 900 FVVIWLLQTRGKTAFHIDGPDSDLILNTLIFNSFVFFQV 938
|
Source: Trifolium repens Species: Trifolium repens Genus: Trifolium Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351720666|ref|NP_001237184.1| plasma membrane Ca2+-ATPase [Glycine max] gi|11066056|gb|AAG28436.1|AF195029_1 plasma membrane Ca2+-ATPase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1617 bits (4186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 794/939 (84%), Positives = 859/939 (91%), Gaps = 1/939 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME YL+ENF DVK KN+SEEALQRWRK C VKN KRRFRFTANLSKRFEAEAIRRSNQE
Sbjct: 1 MEIYLSENFGDVKPKNSSEEALQRWRKACWLVKNHKRRFRFTANLSKRFEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAA+QFIHGLNLSSEYTVPEEV A+GF+IC DELGSIVEG D KKLK HGG
Sbjct: 61 KFRVAVLVSQAAIQFIHGLNLSSEYTVPEEVKAAGFEICADELGSIVEGRDSKKLKSHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+ I KL+TS+ DGISTSEHL+N+RKEIYG+NKF ESPARGFWVYVWE+L D TLMILA
Sbjct: 121 VDAITNKLNTSVDDGISTSEHLVNQRKEIYGVNKFAESPARGFWVYVWESLQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCALVSLVVGI EGWPKGA DG+GIV SILLVVFVTATSDY+QSLQFKDLD+EKKKITV
Sbjct: 181 VCALVSLVVGIIMEGWPKGAQDGIGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKITV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RN R+K+S+YDLLPGDIVHL +GDQVPADGLFVSGFSVLINESSLTGESEPVNV+
Sbjct: 241 QVTRNSCRQKLSMYDLLPGDIVHLNIGDQVPADGLFVSGFSVLINESSLTGESEPVNVSE 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
LNPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 LNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAVVTF+V+VQGLF+RKL+EG+ W WSGDDA++I+EFFAIAVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVVTFSVLVQGLFSRKLREGSQWMWSGDDAMQIVEFFAIAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+KA IC +IKEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKAYICGKIKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ SK F S I SA +LL+SIFNNTGGEVV + K EILG+PTETA+LEFGL LG
Sbjct: 481 NGSKVYSDFSSDIHDSALAILLESIFNNTGGEVVKNKDEKIEILGSPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDF ERQ SK+VKVEPFNS+KK+MGVV++LP+GGFR HCKGASEIILA+CDK ++S+GE
Sbjct: 541 GDFHKERQRSKLVKVEPFNSIKKRMGVVLQLPDGGFRAHCKGASEIILASCDKVVDSSGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VV LNE ++NHLN IE FA EALRTLCLA ++I +EFS IPT GYTCIGIVGIKDP
Sbjct: 601 VVALNEDSINHLNNMIETFAGEALRTLCLAYLDIHDEFSVGTAIPTRGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+ESVAICRSAGI VRMVTGDNINTAKAIARECGILTD GIAIEGPEFREKS+EEL
Sbjct: 661 VRPGVRESVAICRSAGIAVRMVTGDNINTAKAIARECGILTD-GIAIEGPEFREKSEEEL 719
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
+IPKIQVMARSSPMDKHTLVKHLRTT EVV+VTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 720 LDIIPKIQVMARSSPMDKHTLVKHLRTTFQEVVSVTGDGTNDAPALHEADIGLAMGIAGT 779
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIVTVAKWGRSVY+NIQKFVQFQLTVNVVALIVNFSSACLTGN
Sbjct: 780 EVAKESADVIILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALIVNFSSACLTGN 839
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPPN +LMKR PVGRKGNFISNVMWRNILGQS+YQ
Sbjct: 840 APLTAVQLLWVNMIMDTLGALALATEPPNEELMKRPPVGRKGNFISNVMWRNILGQSIYQ 899
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQL 939
F++IW+LQTRGK F LDGPD DLILNTLIFN FVFCQ+
Sbjct: 900 FVVIWFLQTRGKVTFHLDGPDSDLILNTLIFNAFVFCQV 938
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297851218|ref|XP_002893490.1| autoinhibited Ca2+-ATPase 1 [Arabidopsis lyrata subsp. lyrata] gi|297339332|gb|EFH69749.1| autoinhibited Ca2+-ATPase 1 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1600 bits (4143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 784/949 (82%), Positives = 854/949 (89%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEY VPEEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYIVPEEVRQAGFEICPDELGSIVEGHDVKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGINKFTESP RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINKFTESPTRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDYKQSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYKQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+GD+ + +LE+FA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDASHWIWTGDELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ S F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NVSDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPEG FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPEGHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPLNE + HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLNEESTGHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF SACLTGN
Sbjct: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTGN 840
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPP DLMKRSPVGRKGNFISNVMWRNILGQSLYQ
Sbjct: 841 APLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949
+IIW LQT+GK +F LDGPD DL LNTLIFN FVFCQ+ + + ++
Sbjct: 901 LVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIFVFCQVFNEISSREME 949
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225458828|ref|XP_002285297.1| PREDICTED: calcium-transporting ATPase 1, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1600 bits (4143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 799/949 (84%), Positives = 879/949 (92%), Gaps = 2/949 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLN+NF VK KN+SEEALQRWRKLC VKN KRRFRFTANLSKRFEA+AIRRSNQE
Sbjct: 1 MESYLNDNFGGVKPKNSSEEALQRWRKLCWVVKNPKRRFRFTANLSKRFEAQAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFIHGL SS+Y PEEV A+GFQIC DELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFIHGL--SSDYVAPEEVTAAGFQICADELGSIVEGHDLKKLKIHGG 118
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+GIAEKLSTS T+GI ++ LLN+RKEIYGINKFTE+ GFWV+VWEALHDMTLMILA
Sbjct: 119 VQGIAEKLSTSTTNGIPMADDLLNKRKEIYGINKFTETKVPGFWVFVWEALHDMTLMILA 178
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA VSL+VGI EGWPKGAHDGLGIV SILLVVFVTA SDY+QSLQFKDLD EKKKITV
Sbjct: 179 VCAFVSLLVGIIMEGWPKGAHDGLGIVASILLVVFVTAISDYRQSLQFKDLDTEKKKITV 238
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+G R+KISIYDL+PGDIVHL +GDQVPADGLFV GFS+LINESSLTGESEPV+VN+
Sbjct: 239 QVTRDGQRQKISIYDLVPGDIVHLSIGDQVPADGLFVLGFSLLINESSLTGESEPVHVNS 298
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK+
Sbjct: 299 ENPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKL 358
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFA VTFAV+VQGLF+RKL+EG+HW+WSGDDALE+LEFFA+AVTIVVVAVPEGLPLAV
Sbjct: 359 GLFFAAVTFAVLVQGLFSRKLREGSHWSWSGDDALEMLEFFAVAVTIVVVAVPEGLPLAV 418
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMM+DKALVRHLAACETMGSATSICSDKTGTLTTNHMTV+K CIC +IKEV
Sbjct: 419 TLSLAFAMKKMMHDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVVKVCICGKIKEV 478
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+S+ T +F S IP A ++LLQSIFNNTGGE+V + NKTEILGTPTE A+LEFGLLLG
Sbjct: 479 SSSEETSSFCSGIPDFAVRILLQSIFNNTGGEIVTNKDNKTEILGTPTEAALLEFGLLLG 538
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQAERQASK+VKVEPFNS KK+MGVV+E+PEGGFR H KGASEI+LA+CDK ++SNG+
Sbjct: 539 GDFQAERQASKLVKVEPFNSAKKRMGVVLEIPEGGFRAHSKGASEIVLASCDKVIDSNGD 598
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPLNEA+ NHL +TIE+FASEALRTLCLA ME+G+EFSA++P+P++GYTCIGIVGIKDP
Sbjct: 599 VVPLNEASFNHLKDTIERFASEALRTLCLAYMELGSEFSAESPLPSKGYTCIGIVGIKDP 658
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAICRSAGI+VRMVTGDNINTAKAIARECGILTD GIAIEGP FREKS+EEL
Sbjct: 659 VRPGVKESVAICRSAGISVRMVTGDNINTAKAIARECGILTDEGIAIEGPVFREKSEEEL 718
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPKIQVMARSSP+DKH LVKHLRT L EVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 719 QKLIPKIQVMARSSPLDKHILVKHLRTALEEVVAVTGDGTNDAPALHEADIGLAMGIAGT 778
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVII+DDNFSTIVTV KWGRS+YINIQKFVQFQLTVN+VALIVNFSSACLTGN
Sbjct: 779 EVAKESADVIIMDDNFSTIVTVGKWGRSIYINIQKFVQFQLTVNIVALIVNFSSACLTGN 838
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPPN +LMKRSPVGRK NFISNVMWRNI+GQSLYQ
Sbjct: 839 APLTAVQLLWVNMIMDTLGALALATEPPNDELMKRSPVGRKENFISNVMWRNIIGQSLYQ 898
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949
F+IIW+LQTRGKA F LDGPD DLILNT+IFN+FVFCQ+ + + L+
Sbjct: 899 FVIIWFLQTRGKAFFHLDGPDSDLILNTIIFNSFVFCQVFNEINSRELE 947
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356510560|ref|XP_003524005.1| PREDICTED: calcium-transporting ATPase 1, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1600 bits (4142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 793/939 (84%), Positives = 859/939 (91%), Gaps = 1/939 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YL+ENF DVK KN+SEEALQRWRK C VKN KRRFRFTANLSKRFEAEAIRRSNQE
Sbjct: 1 MESYLSENFGDVKPKNSSEEALQRWRKACWLVKNHKRRFRFTANLSKRFEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFIHGLNLS+EYTVPEEV +GF+IC DELGSIVEG D+KKLK HGG
Sbjct: 61 KFRVAVLVSQAALQFIHGLNLSTEYTVPEEVKTAGFEICADELGSIVEGRDLKKLKSHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+ I KL+TS+ DGISTS+HLLN+RKEIYG+NKF ESPARGFWV+VWEAL D TLMILA
Sbjct: 121 VDAITSKLNTSVDDGISTSQHLLNQRKEIYGVNKFAESPARGFWVFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCALVSLVVGI EGWPKGA DG+GIV SILLVVFVTATSDY+QSLQFKDLD+EKKKITV
Sbjct: 181 VCALVSLVVGIIMEGWPKGAQDGIGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKITV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RN R+K+SIYDLLPGDIVHL +GDQVPADG FVSGFSVLINESSLTGESEPVNV+
Sbjct: 241 QVTRNSCRQKLSIYDLLPGDIVHLNIGDQVPADGFFVSGFSVLINESSLTGESEPVNVSE 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
LNPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 LNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAVVTF+V+VQGLF+RKL+EG+ WTWSGDDA++I+EFFA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVVTFSVLVQGLFSRKLREGSQWTWSGDDAMQIVEFFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K CIC +IKEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKVCICGKIKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ SK + F S I SA +LL+SIFNNTGGEVV + K EILG+PTETA+LE GL LG
Sbjct: 481 NGSKVSSDFSSDIHDSALAVLLESIFNNTGGEVVKNKDEKIEILGSPTETALLELGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDF ERQ SK+VKVEPFNS KK+MGVV++LP+GGFR HCKGASEIILAACDK ++S+GE
Sbjct: 541 GDFLKERQRSKLVKVEPFNSTKKRMGVVLQLPDGGFRAHCKGASEIILAACDKVVDSSGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPLNE ++NHLN IE FA EALRTLCLA ++I +EFS PIPT GYT I IVGIKDP
Sbjct: 601 VVPLNEDSINHLNNMIETFAGEALRTLCLAYLDIDDEFSVGTPIPTRGYTFIAIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+ESVAICRSAGI VRMVTGDNINTAKAIARECGILTD GIAIEGPEFREKS+ EL
Sbjct: 661 VRPGVRESVAICRSAGIAVRMVTGDNINTAKAIARECGILTD-GIAIEGPEFREKSEVEL 719
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
+IPKIQVMARSSPMDKHTLVKHLRTT EVV+VTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 720 LDIIPKIQVMARSSPMDKHTLVKHLRTTFQEVVSVTGDGTNDAPALHEADIGLAMGIAGT 779
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN
Sbjct: 780 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 839
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPPN +LMKR PVGRKGNFISNVMWRNILGQS+YQ
Sbjct: 840 APLTAVQLLWVNMIMDTLGALALATEPPNDELMKRPPVGRKGNFISNVMWRNILGQSIYQ 899
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQL 939
F++IW+LQTRGK F LDGPD DLILNTLIFN+FVFCQ+
Sbjct: 900 FVVIWFLQTRGKVTFHLDGPDSDLILNTLIFNSFVFCQV 938
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225438996|ref|XP_002284429.1| PREDICTED: calcium-transporting ATPase 2, plasma membrane-type isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1595 bits (4131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 778/949 (81%), Positives = 858/949 (90%), Gaps = 1/949 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YL+ENFS VK K++S+E LQRWR LC VKN KRRFRFTANLSKR EA A+RR+NQE
Sbjct: 1 MESYLDENFSGVKPKHSSDEVLQRWRNLCSVVKNPKRRFRFTANLSKRGEAAAMRRTNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K R+AVLVS+AALQFI G+ +S +Y VPEE+ A+GFQIC DELGSIVEGHD+KKLK+HGG
Sbjct: 61 KLRIAVLVSKAALQFIQGVPVS-DYVVPEEIKAAGFQICADELGSIVEGHDVKKLKIHGG 119
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+GIAEKLSTS T G++ LLN R+EIYGINKFTE+ ARGF V+VWEALHDMTL+ILA
Sbjct: 120 VDGIAEKLSTSTTYGLTADNKLLNHRQEIYGINKFTETQARGFLVFVWEALHDMTLIILA 179
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCALVSL+VGIA EGWP GAHDGLGIV SILLVV VTATSDY+QSLQF+DLD+EKKKI++
Sbjct: 180 VCALVSLIVGIAMEGWPVGAHDGLGIVASILLVVLVTATSDYRQSLQFRDLDKEKKKISI 239
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RNG+R K+SIYDLLPGDIVHL +GDQVPADGLFVSGF V I+ESSLTGESEPV V+A
Sbjct: 240 QVTRNGYRHKMSIYDLLPGDIVHLSIGDQVPADGLFVSGFCVSIDESSLTGESEPVMVSA 299
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFLLSGTKVQ+GSCKM++TTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVAT IGKI
Sbjct: 300 ENPFLLSGTKVQDGSCKMMITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATFIGKI 359
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GL FAVVTFAV+VQGLF RKL EGTHW+WSGDDALE+LEFFAIAVTIVVVAVPEGLPLAV
Sbjct: 360 GLVFAVVTFAVLVQGLFNRKLGEGTHWSWSGDDALEMLEFFAIAVTIVVVAVPEGLPLAV 419
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT ICSDKTGTLTTNHMTV+K+CIC +K+V
Sbjct: 420 TLSLAFAMKKMMNDKALVRHLAACETMGSATCICSDKTGTLTTNHMTVVKSCICMNVKDV 479
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
D +F S IP S KLLLQSIFNN+GGEVVI + K EILG+PT+ A+LEFGL LG
Sbjct: 480 DRQSNASSFCSEIPDSTVKLLLQSIFNNSGGEVVINKEGKLEILGSPTDAALLEFGLFLG 539
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ ERQA K++KVEPFNS KK+MGVV+ELPEGG R H KGASEIILAACDK ++SNGE
Sbjct: 540 GDFQGERQAPKLIKVEPFNSTKKRMGVVLELPEGGLRAHTKGASEIILAACDKMIDSNGE 599
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+EA+++HL TI +FASEALRTLCLA ME+ N FS + PIP GYTCIGIVGIKDP
Sbjct: 600 VVPLDEASIDHLKATINQFASEALRTLCLAYMELENGFSPNDPIPLSGYTCIGIVGIKDP 659
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD+GIAIEGP+FREKS+EEL
Sbjct: 660 VRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPDFREKSEEEL 719
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPKIQVMARSSP+DKHTLVKHLRTT GEVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 720 FKLIPKIQVMARSSPLDKHTLVKHLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 779
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTI TVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN
Sbjct: 780 EVAKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 839
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPP DLMKR+PVGR+GNFISNVMWRNILGQSLYQ
Sbjct: 840 APLTAVQLLWVNMIMDTLGALALATEPPTDDLMKRAPVGRRGNFISNVMWRNILGQSLYQ 899
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949
FL+IWYLQ GKA+F+L+GPD DLILNTLIFN+FVFCQ+ + + ++
Sbjct: 900 FLVIWYLQVEGKAIFQLNGPDSDLILNTLIFNSFVFCQVFNEISSREME 948
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30690083|ref|NP_849716.1| autoinhibited Ca2+-ATPase 1 [Arabidopsis thaliana] gi|30316378|sp|Q37145.3|ACA1_ARATH RecName: Full=Calcium-transporting ATPase 1, chloroplastic; AltName: Full=Ca(2+)-ATPase isoform 1; AltName: Full=Plastid envelope ATPase 1; Flags: Precursor gi|12320888|gb|AAG50579.1|AC079280_10 envelope Ca2+-ATPase [Arabidopsis thaliana] gi|332192757|gb|AEE30878.1| autoinhibited Ca2+-ATPase 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1591 bits (4119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 778/939 (82%), Positives = 850/939 (90%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEYT+PEEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLPEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGIN+FTESP+RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+FA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF SACLTGN
Sbjct: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTGN 840
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPP DLMKRSPVGRKGNFISNVMWRNILGQSLYQ
Sbjct: 841 APLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQL 939
+IIW LQT+GK +F LDGPD DL LNTLIFN FVFCQ+
Sbjct: 901 LVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIFVFCQV 939
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|516118|gb|AAD10212.1| envelope Ca2+-ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1588 bits (4112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 777/939 (82%), Positives = 849/939 (90%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEYT+PEEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLPEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGIN+FTESP+RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+FA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIV VAKWGRSVYINIQKFVQFQLTVNVVALIVNF SACLTGN
Sbjct: 781 EVAKESADVIILDDNFSTIVIVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTGN 840
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPP DLMKRSPVGRKGNFISNVMWRNILGQSLYQ
Sbjct: 841 APLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQL 939
+IIW LQT+GK +F LDGPD DL LNTLIFN FVFCQ+
Sbjct: 901 LVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIFVFCQV 939
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|509810|gb|AAD10211.1| envelope Ca2+-ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1585 bits (4103), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 776/939 (82%), Positives = 848/939 (90%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEYT+ EEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLSEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGIN+FTESP+RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+FA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIV VAKWGRSVYINIQKFVQFQLTVNVVALIVNF SACLTGN
Sbjct: 781 EVAKESADVIILDDNFSTIVIVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTGN 840
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPP DLMKRSPVGRKGNFISNVMWRNILGQSLYQ
Sbjct: 841 APLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQL 939
+IIW LQT+GK +F LDGPD DL LNTLIFN FVFCQ+
Sbjct: 901 LVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIFVFCQV 939
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 991 | ||||||
| TAIR|locus:2029794 | 1020 | ACA1 "autoinhibited Ca2+-ATPas | 0.957 | 0.930 | 0.809 | 0.0 | |
| TAIR|locus:2120096 | 1014 | ACA2 "calcium ATPase 2" [Arabi | 0.953 | 0.931 | 0.781 | 0.0 | |
| TAIR|locus:2059201 | 1015 | ACA7 "auto-regulated Ca2+-ATPa | 0.953 | 0.931 | 0.771 | 0.0 | |
| TAIR|locus:2082528 | 1025 | ACA11 "autoinhibited Ca2+-ATPa | 0.945 | 0.914 | 0.621 | 2.3e-309 | |
| TAIR|locus:2062673 | 1030 | ACA4 ""autoinhibited Ca(2+)-AT | 0.947 | 0.911 | 0.623 | 3.7e-309 | |
| TAIR|locus:2175579 | 1074 | ACA8 ""autoinhibited Ca2+ -ATP | 0.918 | 0.847 | 0.482 | 8.2e-218 | |
| TAIR|locus:2123924 | 1069 | ACA10 "autoinhibited Ca(2+)-AT | 0.930 | 0.862 | 0.471 | 1.3e-217 | |
| TAIR|locus:2094726 | 1086 | ACA9 "autoinhibited Ca(2+)-ATP | 0.928 | 0.847 | 0.470 | 4e-209 | |
| TAIR|locus:2087363 | 1033 | AT3G63380 [Arabidopsis thalian | 0.891 | 0.854 | 0.444 | 8.1e-195 | |
| DICTYBASE|DDB_G0289473 | 1077 | DDB_G0289473 "Ca2+-ATPase" [Di | 0.441 | 0.406 | 0.487 | 3.2e-186 |
| TAIR|locus:2029794 ACA1 "autoinhibited Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3961 (1399.4 bits), Expect = 0., P = 0.
Identities = 768/949 (80%), Positives = 843/949 (88%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEYT+PEEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLPEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGIN+FTESP+RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+F PEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF SACLTGN
Sbjct: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTGN 840
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPP DLMKRSPVGRKGNFISNVMWRNILGQSLYQ
Sbjct: 841 APLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949
+IIW LQT+GK +F LDGPD DL LNTLIFN FVFCQ+ + + ++
Sbjct: 901 LVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIFVFCQVFNEISSREME 949
|
|
| TAIR|locus:2120096 ACA2 "calcium ATPase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3846 (1358.9 bits), Expect = 0., P = 0.
Identities = 742/950 (78%), Positives = 840/950 (88%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVKAK++SEE L++WR LCG VKN KRRFRFTANLSKR+EA A+RR+NQE
Sbjct: 1 MESYLNENF-DVKAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K R+AVLVS+AA QFI G++ S+YTVPE+V A+GF+IC DELGSIVE HD+KKLK HGG
Sbjct: 60 KLRIAVLVSKAAFQFISGVS-PSDYTVPEDVKAAGFEICADELGSIVESHDVKKLKFHGG 118
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+G+A KL S TDG+ST L++R+E++GINKF ES RGFWV+VWEAL DMTLMIL
Sbjct: 119 VDGLAGKLKASPTDGLSTEAAQLSQRQELFGINKFAESEMRGFWVFVWEALQDMTLMILG 178
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA VSL+VGIATEGWPKG+HDGLGI SILLVVFVTATSDY+QSLQF+DLD+EKKKITV
Sbjct: 179 VCAFVSLIVGIATEGWPKGSHDGLGIAASILLVVFVTATSDYRQSLQFRDLDKEKKKITV 238
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RNGFR+K+SIYDLLPGDIVHL +GDQVPADGLF+SGFSV+I+ESSLTGESEPV VNA
Sbjct: 239 QVTRNGFRQKLSIYDLLPGDIVHLAIGDQVPADGLFLSGFSVVIDESSLTGESEPVMVNA 298
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFL+SGTKVQ+GSCKM++TTVGMRTQWGKLMATL+EGGDDETPLQVKLNGVATIIGKI
Sbjct: 299 QNPFLMSGTKVQDGSCKMMITTVGMRTQWGKLMATLTEGGDDETPLQVKLNGVATIIGKI 358
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXPEGLPLAV 420
GLFFAVVTFAV+VQG+F RKL GTHW WSGD+ALE+LE+F PEGLPLAV
Sbjct: 359 GLFFAVVTFAVLVQGMFMRKLSTGTHWVWSGDEALELLEYFAIAVTIVVVAVPEGLPLAV 418
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K+CIC +++V
Sbjct: 419 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCICMNVQDV 478
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
N KG+ + S IP SA KLL+QSIFNNTGGEVV+ + KTE+LGTPTETAILE GL LG
Sbjct: 479 AN-KGS-SLQSEIPESAVKLLIQSIFNNTGGEVVVNKHGKTELLGTPTETAILELGLSLG 536
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSNG 599
G FQ ER++ K++KVEPFNS KK+MGVVIELPEGG R H KGASEI+LAACDK +NS+G
Sbjct: 537 GKFQEERKSYKVIKVEPFNSTKKRMGVVIELPEGGRMRAHTKGASEIVLAACDKVVNSSG 596
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
EVVPL+E ++ +LN TI +FA+EALRTLCLA M+I FS D IP G+TC+GIVGIKD
Sbjct: 597 EVVPLDEESIKYLNVTINEFANEALRTLCLAYMDIEGGFSPDDAIPASGFTCVGIVGIKD 656
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGVKESV +CR AGITVRMVTGDNINTAKAIARECGILTD+GIAIEGP FREK+ EE
Sbjct: 657 PVRPGVKESVELCRRAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKNQEE 716
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
L +LIPKIQVMARSSPMDKHTLVK LRTT EVVAVTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 717 LLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAG 776
Query: 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVAL+VNFSSACLTG
Sbjct: 777 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALVVNFSSACLTG 836
Query: 840 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLY 899
+APLTAVQLLWVNMIMDTLGALALATEPPN +LMKR PVGR+GNFI+N MWRNILGQ++Y
Sbjct: 837 SAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRLPVGRRGNFITNAMWRNILGQAVY 896
Query: 900 QFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949
QF++IW LQ +GKA+F LDGPD L+LNTLIFN FVFCQ+ + + ++
Sbjct: 897 QFIVIWILQAKGKAMFGLDGPDSTLMLNTLIFNCFVFCQVFNEISSREME 946
|
|
| TAIR|locus:2059201 ACA7 "auto-regulated Ca2+-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3766 (1330.8 bits), Expect = 0., P = 0.
Identities = 734/951 (77%), Positives = 830/951 (87%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLN NF DVKAK++SEE L++WR LC VKN KRRFRFTANLSKR+EA A+RR+NQE
Sbjct: 1 MESYLNSNF-DVKAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K R+AVLVS+AA QFI G++ S+Y VPEEV A+GF IC DELGSIVEGHD+KKLK HGG
Sbjct: 60 KLRIAVLVSKAAFQFISGVS-PSDYKVPEEVKAAGFDICADELGSIVEGHDVKKLKFHGG 118
Query: 121 VEGIAEKLSTSITDGISTSE-HLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
V+G++ KL G+ST E L++R+E++GINKF ES R FWV+VWEAL DMTLMIL
Sbjct: 119 VDGLSGKLKACPNAGLSTGEPEQLSKRQELFGINKFAESELRSFWVFVWEALQDMTLMIL 178
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
VCA VSL+VGIATEGWP+G+HDGLGIV SILLVVFVTATSDY+QSLQF+DLD+EKKKIT
Sbjct: 179 GVCAFVSLIVGIATEGWPQGSHDGLGIVASILLVVFVTATSDYRQSLQFRDLDKEKKKIT 238
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN 299
VQV RNGFR+K+SIYDLLPGD+VHL +GDQVPADGLF+SGFSV+I+ESSLTGESEPV V
Sbjct: 239 VQVTRNGFRQKMSIYDLLPGDVVHLAIGDQVPADGLFLSGFSVVIDESSLTGESEPVMVT 298
Query: 300 ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359
A NPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK
Sbjct: 299 AQNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 358
Query: 360 IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXPEGLPLA 419
IGL FA+VTFAV+VQG+F RKL G HW WSGDDALE+LE+F PEGLPLA
Sbjct: 359 IGLSFAIVTFAVLVQGMFMRKLSLGPHWWWSGDDALELLEYFAIAVTIVVVAVPEGLPLA 418
Query: 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479
VTLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K+CIC +++
Sbjct: 419 VTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCICMNVQD 478
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
V SK + + S IP +A KLLLQ IFNNTGGEVV+ E KTEILGTPTETAILE GL L
Sbjct: 479 VA-SKSS-SLQSDIPEAALKLLLQLIFNNTGGEVVVNERGKTEILGTPTETAILELGLSL 536
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSN 598
GG FQ ERQ++K++KVEPFNS KK+MGVVIELPEGG R H KGASEI+LAACDK +NS+
Sbjct: 537 GGKFQEERQSNKVIKVEPFNSTKKRMGVVIELPEGGRIRAHTKGASEIVLAACDKVINSS 596
Query: 599 GEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIK 658
GEVVPL++ ++ LN TI++FA+EALRTLCLA M+I + FSAD IP +G+TCIGIVGIK
Sbjct: 597 GEVVPLDDESIKFLNVTIDEFANEALRTLCLAYMDIESGFSADEGIPEKGFTCIGIVGIK 656
Query: 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718
DP+RPGV+ESV +CR AGI VRMVTGDNINTAKAIARECGILTD+GIAIEGP FREK+ E
Sbjct: 657 DPVRPGVRESVELCRRAGIMVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKNQE 716
Query: 719 ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778
E+ +LIPKIQVMARSSPMDKHTLVK LRTT EVVAVTGDGTNDAPALHEADIGLAMGIA
Sbjct: 717 EMLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIA 776
Query: 779 GTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 838
GTEVAKE ADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT
Sbjct: 777 GTEVAKEIADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 836
Query: 839 GNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSL 898
G+APLTAVQLLWVNMIMDTLGALALATEPPN +LMKR PVGR+GNFI+N MWRNILGQ++
Sbjct: 837 GSAPLTAVQLLWVNMIMDTLGALALATEPPNNELMKRMPVGRRGNFITNAMWRNILGQAV 896
Query: 899 YQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949
YQF+IIW LQ +GK++F L G D L+LNTLIFN FVFCQ+ + + ++
Sbjct: 897 YQFIIIWILQAKGKSMFGLVGSDSTLVLNTLIFNCFVFCQVFNEVSSREME 947
|
|
| TAIR|locus:2082528 ACA11 "autoinhibited Ca2+-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2968 (1049.8 bits), Expect = 2.3e-309, P = 2.3e-309
Identities = 590/949 (62%), Positives = 724/949 (76%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
M N L + F +V +KN S EA QRWR G VKNR RRFR +NL K E E R QE
Sbjct: 1 MSNLLKD-F-EVASKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAENEKKRCQIQE 58
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RV V +AA QFI EY + +EV +GF + DEL S+V HD K L GG
Sbjct: 59 KIRVVFYVQKAAFQFIDA-GARPEYKLTDEVKKAGFYVEADELASMVRNHDTKSLTKIGG 117
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EGIA+K+S S+ +G+ +SE L+ R++IYG N++TE PAR F +VWEAL D+TL+IL
Sbjct: 118 PEGIAQKVSVSLAEGVRSSE--LHIREKIYGENRYTEKPARSFLTFVWEALQDITLIILM 175
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA+VS+ VG+ATEG+PKG +DG GI++SI+LVV VTA SDYKQSLQF+DLDREKKKI +
Sbjct: 176 VCAVVSIGVGVATEGFPKGMYDGTGILLSIILVVMVTAISDYKQSLQFRDLDREKKKIII 235
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+G R+++SI+DL+ GD+VHL +GDQVPADG+F+SG+++ I+ESSL+GESEP +VN
Sbjct: 236 QVTRDGSRQEVSIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNK 295
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
PFLLSGTKVQNGS KMLVTTVGMRT+WGKLM TLSEGG+DETPLQVKLNGVATIIGKI
Sbjct: 296 EKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMDTLSEGGEDETPLQVKLNGVATIIGKI 355
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXPEGLPLAV 420
GL FAV+TF V+ K G+ WS +DAL +L++F PEGLPLAV
Sbjct: 356 GLGFAVLTFVVLCIRFVVEKATAGSITEWSSEDALTLLDYFAIAVTIIVVAVPEGLPLAV 415
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMK++M+D+ALVRHLAACETMGS+T IC+DKTGTLTTNHM V K ICE IKE
Sbjct: 416 TLSLAFAMKQLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICENIKER 475
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
F ++ +L+Q+IF NTG EVV + KT+ILG+PTE AILEFGLLLG
Sbjct: 476 QEEN----FQLNLSEQVKNILIQAIFQNTGSEVVKDKEGKTQILGSPTERAILEFGLLLG 531
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GD +R+ KI+K+EPFNS KK+M V+ G R CKGASEI+L C+K ++SNGE
Sbjct: 532 GDVDTQRREHKILKIEPFNSDKKKMSVLTSHSGGKVRAFCKGASEIVLKMCEKVVDSNGE 591
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VPL+E + +++ IE FASEALRTLCL ++ D +P GYT + +VGIKDP
Sbjct: 592 SVPLSEEKIASISDVIEGFASEALRTLCLVYTDLDEAPRGD--LPNGGYTLVAVVGIKDP 649
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+E+V C++AGITVRMVTGDNI+TAKAIA+ECGILT G+AIEG +FR E+
Sbjct: 650 VRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGILTAGGVAIEGSDFRNLPPHEM 709
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
++PKIQVMARS P+DKHTLV +LR +GEVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 710 RAILPKIQVMARSLPLDKHTLVNNLRK-MGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 768
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN 840
EVAKE+ADVII+DDNF+TIV VAKWGR+VYINIQKFVQFQLTVNVVALI+NF SAC+TG+
Sbjct: 769 EVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLTVNVVALIINFVSACITGS 828
Query: 841 APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900
APLTAVQLLWVNMIMDTLGALALATEPPN LMKR P+GR +FI+ MWRNI+GQS+YQ
Sbjct: 829 APLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRQPIGRTASFITRAMWRNIIGQSIYQ 888
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949
+++ L GK + L+GPD ++LNT+IFN+FVFCQ+ + + ++
Sbjct: 889 LIVLGILNFAGKQILNLNGPDSTIVLNTIIFNSFVFCQVFNEVNSREIE 937
|
|
| TAIR|locus:2062673 ACA4 ""autoinhibited Ca(2+)-ATPase, isoform 4"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2966 (1049.1 bits), Expect = 3.7e-309, P = 3.7e-309
Identities = 592/950 (62%), Positives = 731/950 (76%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
M N L + F +V+AKN S EA QRWR VKNR RRFR +L K + E + QE
Sbjct: 1 MSNLLRD-F-EVEAKNPSLEARQRWRSSVSIVKNRTRRFRNIRDLDKLADYENKKHQIQE 58
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RVA V +AAL FI EY + +EV +GF I DEL S+V +D K L GG
Sbjct: 59 KIRVAFFVQKAALHFIDAA-ARPEYKLTDEVKKAGFSIEADELASMVRKNDTKSLAQKGG 117
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
VE +A+K+S S+++GI +SE + R++I+G N++TE PAR F ++VWEALHD+TL+IL
Sbjct: 118 VEELAKKVSVSLSEGIRSSEVPI--REKIFGENRYTEKPARSFLMFVWEALHDITLIILM 175
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA+VS+ VG+ATEG+P+G +DG GI++SILLVV VTA SDYKQSLQF+DLDREKKKI V
Sbjct: 176 VCAVVSIGVGVATEGFPRGMYDGTGILLSILLVVMVTAISDYKQSLQFRDLDREKKKIIV 235
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+G R++ISI+DL+ GD+VHL +GDQVPADG+F+SG+++ I+ESSL+GESEP +VN
Sbjct: 236 QVTRDGSRQEISIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNK 295
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
PFLLSGTKVQNGS KMLVTTVGMRT+WGKLM TL +GG+DETPLQVKLNGVATIIGKI
Sbjct: 296 EKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMETLVDGGEDETPLQVKLNGVATIIGKI 355
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXPEGLPLAV 420
GL FAV+TF V+ K G+ WS +DAL +L++F PEGLPLAV
Sbjct: 356 GLSFAVLTFVVLCIRFVLDKATSGSFTNWSSEDALTLLDYFAISVTIIVVAVPEGLPLAV 415
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE- 479
TLSLAFAMKK+M+D+ALVRHLAACETMGS+T IC+DKTGTLTTNHM V K IC++++E
Sbjct: 416 TLSLAFAMKKLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICDKVQER 475
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
+ SK +F + LLQ IF NTG EVV + T+ILG+PTE AILEFGLLL
Sbjct: 476 QEGSK--ESFELELSEEVQSTLLQGIFQNTGSEVVKDKDGNTQILGSPTERAILEFGLLL 533
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNG 599
GGDF +R+ KI+K+EPFNS KK+M V+I LP GG R CKGASEI+L C+ ++SNG
Sbjct: 534 GGDFNTQRKEHKILKIEPFNSDKKKMSVLIALPGGGARAFCKGASEIVLKMCENVVDSNG 593
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
E VPL E + +++ IE FASEALRTLCL ++ S + +P GYT + +VGIKD
Sbjct: 594 ESVPLTEERITSISDIIEGFASEALRTLCLVYKDLDEAPSGE--LPDGGYTMVAVVGIKD 651
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGV+E+V C++AGITVRMVTGDNI+TAKAIA+ECGI T+ G+AIEG EFR+ S E
Sbjct: 652 PVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGIYTEGGLAIEGSEFRDLSPHE 711
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
+ +IPKIQVMARS P+DKHTLV +LR +GEVVAVTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 712 MRAIIPKIQVMARSLPLDKHTLVSNLRK-IGEVVAVTGDGTNDAPALHEADIGLAMGIAG 770
Query: 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
TEVAKE+ADVII+DDNF TIV VA+WGR+VYINIQKFVQFQLTVNVVALI+NF SAC+TG
Sbjct: 771 TEVAKENADVIIMDDNFKTIVNVARWGRAVYINIQKFVQFQLTVNVVALIINFVSACITG 830
Query: 840 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLY 899
+APLTAVQLLWVNMIMDTLGALALATEPPN LMKR+P+ R +FI+ MWRNI GQS+Y
Sbjct: 831 SAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRAPIARTASFITKTMWRNIAGQSVY 890
Query: 900 QFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949
Q +++ L GK++ +LDGPD +LNT+IFN+FVFCQ+ + + ++
Sbjct: 891 QLIVLGILNFAGKSLLKLDGPDSTAVLNTVIFNSFVFCQVFNEINSREIE 940
|
|
| TAIR|locus:2175579 ACA8 ""autoinhibited Ca2+ -ATPase, isoform 8"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2104 (745.7 bits), Expect = 8.2e-218, P = 8.2e-218
Identities = 459/952 (48%), Positives = 617/952 (64%)
Query: 12 VKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQA 71
+ +KN S E LQ+WRK V N RRFR+T +L K E +R +K R A
Sbjct: 34 IPSKNASIERLQQWRK-AALVLNASRRFRYTLDLKKEQETREMR----QKIRSHAHALLA 88
Query: 72 ALQFIH-GLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIAEKLST 130
A +F+ G E T A F I P++L + + H+ L+ +GG +G+A L T
Sbjct: 89 ANRFMDMGRESGVEKTTGPATPAGDFGITPEQLVIMSKDHNSGALEQYGGTQGLANLLKT 148
Query: 131 SITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVG 190
+ GIS + L +RK IYG N + +GF ++W+A HD+TL+IL V A+ SL +G
Sbjct: 149 NPEKGISGDDDDLLKRKTIYGSNTYPRKKGKGFLRFLWDACHDLTLIILMVAAVASLALG 208
Query: 191 IATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRK 250
I TEG +G +DG I +++LV+ VTA SDYKQSLQF++L+ EK+ I ++V R G R +
Sbjct: 209 IKTEGIKEGWYDGGSIAFAVILVIVVTAVSDYKQSLQFQNLNDEKRNIHLEVLRGGRRVE 268
Query: 251 ISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA-LNPFLLSGT 309
ISIYD++ GD++ L +G+QVPADG+ +SG S+ ++ESS+TGES+ VN +A +PFL+SG
Sbjct: 269 ISIYDIVVGDVIPLNIGNQVPADGVLISGHSLALDESSMTGESKIVNKDANKDPFLMSGC 328
Query: 310 KVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTF 369
KV +G+ MLVT VG+ T+WG LMA++SE +ETPLQV+LNGVAT IG IGL A
Sbjct: 329 KVADGNGSMLVTGVGVNTEWGLLMASISEDNGEETPLQVRLNGVATFIGSIGLAVAAAVL 388
Query: 370 AVMVQGLFTRKLQE---GTHW----TWSGDDALEILEFFXXXXXXXXXXXPEGLPLAVTL 422
+++ FT ++ G + T G ++++ PEGLPLAVTL
Sbjct: 389 VILLTRYFTGHTKDNNGGPQFVKGKTKVGHVIDDVVKVLTVAVTIVVVAVPEGLPLAVTL 448
Query: 423 SLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDN 482
+LA++M+KMM DKALVR L+ACETMGSAT+ICSDKTGTLT N MTV+++ K+ D
Sbjct: 449 TLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVESYAGG--KKTDT 506
Query: 483 SKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN-KTEILGTPTETAILEFGLLLGG 541
+ +PA+ + L+++ I NT G + + EG E G+PTE AIL +G+ LG
Sbjct: 507 EQ--------LPATITSLVVEGISQNTTGSIFVPEGGGDLEYSGSPTEKAILGWGVKLGM 558
Query: 542 DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEV 601
+F+ R S I+ PFNS KK+ GV ++ +G VH KGASEI+LA+C +++ +G V
Sbjct: 559 NFETARSQSSILHAFPFNSEKKRGGVAVKTADGEVHVHWKGASEIVLASCRSYIDEDGNV 618
Query: 602 VPLNEAAVNHLNETIEKFASEALRTLCLAC-------MEIGNEFSADAPIPTEGYTCIGI 654
P+ + + I A LR + LA + G E S +P + + I
Sbjct: 619 APMTDDKASFFKNGINDMAGRTLRCVALAFRTYEAEKVPTGEELSKWV-LPEDDLILLAI 677
Query: 655 VGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG-----IAIEG 709
VGIKDP RPGVK+SV +C++AG+ VRMVTGDN+ TA+AIA ECGIL+ + IEG
Sbjct: 678 VGIKDPCRPGVKDSVVLCQNAGVKVRMVTGDNVQTARAIALECGILSSDADLSEPTLIEG 737
Query: 710 PEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 769
FRE +D E K+ KI VM RSSP DK LV+ LR G VVAVTGDGTNDAPALHEA
Sbjct: 738 KSFREMTDAERDKISDKISVMGRSSPNDKLLLVQSLRRQ-GHVVAVTGDGTNDAPALHEA 796
Query: 770 DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALI 829
DIGLAMGIAGTEVAKES+D+IILDDNF+++V V +WGRSVY NIQKF+QFQLTVNV AL+
Sbjct: 797 DIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALV 856
Query: 830 VNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVM 889
+N +A +G+ PLTAVQLLWVN+IMDTLGALALATEPP LM R PVGRK I+N+M
Sbjct: 857 INVVAAISSGDVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMGRPPVGRKEPLITNIM 916
Query: 890 WRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPD---LILNTLIFNTFVFCQ 938
WRN+L Q++YQ ++ L RG ++ L+ + + NT+IFN FV CQ
Sbjct: 917 WRNLLIQAIYQVSVLLTLNFRGISILGLEHEVHEHATRVKNTIIFNAFVLCQ 968
|
|
| TAIR|locus:2123924 ACA10 "autoinhibited Ca(2+)-ATPase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2102 (745.0 bits), Expect = 1.3e-217, P = 1.3e-217
Identities = 453/960 (47%), Positives = 623/960 (64%)
Query: 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEA-EAIR--RSNQE 60
Y + F KN E L+RWR+ V N RRFR+T +L + + + +R R++ +
Sbjct: 26 YEDSPFDIASTKNAPVERLRRWRQ-AALVLNASRRFRYTLDLKREEDKKQMLRKMRAHAQ 84
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
R A L AA + + G+ +S P F I +++ SI +I L+ GG
Sbjct: 85 AIRAAHLFKAAASR-VTGI--ASPLPTP---GGGDFGIGQEQIVSISRDQNIGALQELGG 138
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V G+++ L T++ GI + + +RK +G N + + R FW +VWEA D+TL+IL
Sbjct: 139 VRGLSDLLKTNLEKGIHGDDDDILKRKSAFGSNTYPQKKGRSFWRFVWEASQDLTLIILI 198
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
V A+ SL +GI TEG KG +DG+ I ++LLV+ VTATSDY+QSLQF++L+ EK+ I +
Sbjct: 199 VAAVASLALGIKTEGIEKGWYDGISIAFAVLLVIVVTATSDYRQSLQFQNLNEEKRNIRL 258
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
+V R+G R +ISIYD++ GD++ L +GDQVPADG+ V+G S+ ++ESS+TGES+ V N+
Sbjct: 259 EVTRDGRRVEISIYDIVVGDVIPLNIGDQVPADGVLVAGHSLAVDESSMTGESKIVQKNS 318
Query: 301 L-NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359
+PFL+SG KV +G+ MLVT VG+ T+WG LMA++SE ETPLQV+LNGVAT IG
Sbjct: 319 TKHPFLMSGCKVADGNGTMLVTGVGVNTEWGLLMASVSEDNGGETPLQVRLNGVATFIGI 378
Query: 360 IGLFFAVVTFAVMVQGLFT--RKLQEGTHWTWSGDDALE-----ILEFFXXXXXXXXXXX 412
+GL A V V+V FT K ++G G E ++E F
Sbjct: 379 VGLTVAGVVLFVLVVRYFTGHTKNEQGGPQFIGGKTKFEHVLDDLVEIFTVAVTIVVVAV 438
Query: 413 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKAC 472
PEGLPLAVTL+LA++M+KMM DKALVR L+ACETMGSAT+ICSDKTGTLT N MTV++ C
Sbjct: 439 PEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVE-C 497
Query: 473 ICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAI 532
++++D+ P S +P++ + +L++ I +NT G V E + ++ G+PTE AI
Sbjct: 498 YAG-LQKMDS----PDSSSKLPSAFTSILVEGIAHNTTGSVFRSESGEIQVSGSPTERAI 552
Query: 533 LEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACD 592
L + + LG DF A + S V+ PFNS KK+ GV ++ P+ +H KGA+EI+L +C
Sbjct: 553 LNWAIKLGMDFDALKSESSAVQFFPFNSEKKRGGVAVKSPDSSVHIHWKGAAEIVLGSCT 612
Query: 593 KFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEI-GNEFSADAP------IP 645
+++ + V ++E + L + I+ A+ +LR + +A ++ D +P
Sbjct: 613 HYMDESESFVDMSEDKMGGLKDAIDDMAARSLRCVAIAFRTFEADKIPTDEEQLSRWELP 672
Query: 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI 705
+ + IVGIKDP RPGVK SV +C+ AG+ VRMVTGDNI TAKAIA ECGIL +
Sbjct: 673 EDDLILLAIVGIKDPCRPGVKNSVLLCQQAGVKVRMVTGDNIQTAKAIALECGILASDSD 732
Query: 706 A-----IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGT 760
A IEG FR S+EE ++ +I VM RSSP DK LV+ L+ G VVAVTGDGT
Sbjct: 733 ASEPNLIEGKVFRSYSEEERDRICEEISVMGRSSPNDKLLLVQSLKRR-GHVVAVTGDGT 791
Query: 761 NDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQ 820
NDAPALHEADIGLAMGI GTEVAKE +D+IILDDNF ++V V +WGRSVY NIQKF+QFQ
Sbjct: 792 NDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNFESVVKVVRWGRSVYANIQKFIQFQ 851
Query: 821 LTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGR 880
LTVNV AL++N +A G PLTAVQLLWVN+IMDTLGALALATEPP LM R+PVGR
Sbjct: 852 LTVNVAALVINVVAAISAGEVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMDRAPVGR 911
Query: 881 KGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDG-PDPDLILNTLIFNTFVFCQL 939
+ I+N+MWRN+ Q++YQ ++ L RG ++ L P+ + + NT+IFN FV CQ+
Sbjct: 912 REPLITNIMWRNLFIQAMYQVTVLLILNFRGISILHLKSKPNAERVKNTVIFNAFVICQV 971
|
|
| TAIR|locus:2094726 ACA9 "autoinhibited Ca(2+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2022 (716.8 bits), Expect = 4.0e-209, P = 4.0e-209
Identities = 451/959 (47%), Positives = 616/959 (64%)
Query: 6 NENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVA 65
++ F KN S E+L+RWR+ V N RRFR+T +L+K + RR R
Sbjct: 42 DDPFDIDNTKNASVESLRRWRQ-AALVLNASRRFRYTLDLNKEEHYDNRRRM----IRAH 96
Query: 66 VLVSQAALQFIHGLNLSSEYTVPEEVAASG-FQICPDELGSIVEGHDIKKLKVHGGVEGI 124
V +AAL F + A++G F I ++L S+ ++ L+ +GGV+G+
Sbjct: 97 AQVIRAALLFKLAGEQQIAFGSSTPAASTGNFDIDLEKLVSMTRNQNMSNLQQYGGVKGV 156
Query: 125 AEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCAL 184
AEKL +++ GI+ E + RK +G N + + + F++++WEA D+TL+IL + A+
Sbjct: 157 AEKLKSNMEQGINEDEKEVIDRKNAFGSNTYPKKKGKNFFMFLWEAWQDLTLIILIIAAV 216
Query: 185 VSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR 244
SL +GI TEG +G DG I ++LLV+ VTA SDY+QSLQF++L+ EK+ I ++V R
Sbjct: 217 TSLALGIKTEGLKEGWLDGGSIAFAVLLVIVVTAVSDYRQSLQFQNLNDEKRNIQLEVMR 276
Query: 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF 304
G KISIYD++ GD++ L +GDQVPADG+ +SG S+ I+ESS+TGES+ V+ + +PF
Sbjct: 277 GGRTVKISIYDVVVGDVIPLRIGDQVPADGVLISGHSLAIDESSMTGESKIVHKDQKSPF 336
Query: 305 LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFF 364
L+SG KV +G MLVT VG+ T+WG LMA++SE +ETPLQV+LNG+AT IG +GL
Sbjct: 337 LMSGCKVADGVGNMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGLATFIGIVGLSV 396
Query: 365 AVVTFAVMVQGLFTRKLQE---GTHW---TWSGDDALE-ILEFFXXXXXXXXXXXPEGLP 417
A+V ++ FT Q+ T + T S D ++ ++ F PEGLP
Sbjct: 397 ALVVLVALLVRYFTGTTQDTNGATQFIKGTTSISDIVDDCVKIFTIAVTIVVVAVPEGLP 456
Query: 418 LAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477
LAVTL+LA++M+KMM DKALVR L+ACETMGSAT+ICSDKTGTLT N MTV++
Sbjct: 457 LAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVETYAGGSK 516
Query: 478 KEV-DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIG-EGNKTEILGTPTETAILEF 535
+V DN G P + L+ + + NT G + +G + EI G+PTE AIL +
Sbjct: 517 MDVADNPSGLH------PKLVA-LISEGVAQNTTGNIFHPKDGGEVEISGSPTEKAILSW 569
Query: 536 GLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFL 595
LG F R S I+ PFNS KK+ GV + + +H KGA+EI+LA C +++
Sbjct: 570 AYKLGMKFDTIRSESAIIHAFPFNSEKKRGGVAVLRGDSEVFIHWKGAAEIVLACCTQYM 629
Query: 596 NSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLAC--MEIGN----EFSADA-PIPTEG 648
+SNG + + E+ I+ A +LR + +AC E+ + D +P +
Sbjct: 630 DSNGTLQSI-ESQKEFFRVAIDSMAKNSLRCVAIACRTQELNQVPKEQEDLDKWALPEDE 688
Query: 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA-- 706
+ IVGIKDP RPGV+E+V IC SAG+ VRMVTGDN+ TAKAIA ECGIL+ + A
Sbjct: 689 LILLAIVGIKDPCRPGVREAVRICTSAGVKVRMVTGDNLQTAKAIALECGILSSDTEAVE 748
Query: 707 ---IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDA 763
IEG FRE S++E ++ KI VM RSSP DK LV+ LR G+VVAVTGDGTNDA
Sbjct: 749 PTIIEGKVFRELSEKEREQVAKKITVMGRSSPNDKLLLVQALRKN-GDVVAVTGDGTNDA 807
Query: 764 PALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTV 823
PALHEADIGL+MGI+GTEVAKES+D+IILDDNF+++V V +WGRSVY NIQKF+QFQLTV
Sbjct: 808 PALHEADIGLSMGISGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTV 867
Query: 824 NVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGN 883
NV ALI+N +A +G+ PL AVQLLWVN+IMDTLGALALATEPP LM R+PVGR+
Sbjct: 868 NVAALIINVVAAMSSGDVPLKAVQLLWVNLIMDTLGALALATEPPTDHLMHRTPVGRREP 927
Query: 884 FISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDL---ILNTLIFNTFVFCQL 939
I+N+MWRN+L QS YQ ++ L G ++ L+ + + NT+IFN FV CQ+
Sbjct: 928 LITNIMWRNLLVQSFYQVAVLLVLNFAGLSILGLNHENHAHAVEVKNTMIFNAFVMCQI 986
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| TAIR|locus:2087363 AT3G63380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1887 (669.3 bits), Expect = 8.1e-195, P = 8.1e-195
Identities = 411/925 (44%), Positives = 590/925 (63%)
Query: 35 RKRRFRFTANLSKRFEAEAIR-----RSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPE 89
R+ RF + A S R ++ R + + ++ +S AL+ G ++S +P
Sbjct: 26 RRWRFAYAAIYSMRAMLSLVKEIVPARIDPKTSDASLSLSYTALESGEGAKINS---MPL 82
Query: 90 EVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEI 149
+ I ++L I++G D+ ++ GGVEG+A L T+ T GI +E ++RR+++
Sbjct: 83 SYVPA---IDQEQLVEIMKGKDLPGIQALGGVEGVAASLRTNPTKGIHGNEQEVSRRRDL 139
Query: 150 YGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMS 209
+G N + + P +G +V+EA D+T++IL VCA+ SL GI G +G ++G I ++
Sbjct: 140 FGSNTYHKPPPKGLLFFVYEAFKDLTILILLVCAIFSLGFGIKEHGIKEGWYEGGSIFVA 199
Query: 210 ILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQ 269
+ LV+ V+A S+++Q QF L + I V+V R+ R+ ISI+D++ GD+V L +GDQ
Sbjct: 200 VFLVIVVSALSNFRQERQFDKLSKISNNIKVEVLRDSRRQHISIFDVVVGDVVFLKIGDQ 259
Query: 270 VPADGLFVSGFSVLINESSLTGESEPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVGMRTQ 328
+PADGLF+ G S+ ++ESS+TGES+ + V+ NPFL SGTK+ +G +MLV +VGM T
Sbjct: 260 IPADGLFLEGHSLQVDESSMTGESDHLEVDHKDNPFLFSGTKIVDGFAQMLVVSVGMSTT 319
Query: 329 WGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWT 388
WG+ M+++++ + TPLQV+L+ + + IGKIGL A + V++ FT ++
Sbjct: 320 WGQTMSSINQDSSERTPLQVRLDTLTSTIGKIGLTVAALVLVVLLVRYFTGNTEKEGKRE 379
Query: 389 WSGD----DAL--EILEFFXXXXXXXXXXXPEGLPLAVTLSLAFAMKKMMNDKALVRHLA 442
++G D + ++ PEGLPLAVTL+LA++MK+MM+D+A+VR L+
Sbjct: 380 YNGSKTPVDTVVNSVVRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMSDQAMVRKLS 439
Query: 443 ACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLL 502
ACETMGSAT IC+DKTGTLT N M V K + +E D++K I LL
Sbjct: 440 ACETMGSATVICTDKTGTLTLNEMKVTKFWLGQESIHEDSTK-------MISPDVLDLLY 492
Query: 503 QSIFNNTGGEVVIGEGNKT-EILGTPTETAILEFGLL-LGGDFQAERQASKIVKVEPFNS 560
Q NT G V + + T E G+PTE A+L + +L LG D ++ +Q ++++VE F+S
Sbjct: 493 QGTGLNTTGSVCVSDSGSTPEFSGSPTEKALLSWTVLNLGMDMESVKQKHEVLRVETFSS 552
Query: 561 VKKQMGVVIELP-EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKF 619
KK+ GV++ + VH KGA+E++LA C + S G V ++ A + + I+
Sbjct: 553 AKKRSGVLVRRKSDNTVHVHWKGAAEMVLAMCSHYYTSTGSVDLMDSTAKSRIQAIIQGM 612
Query: 620 ASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITV 679
A+ +LR + A N D+ + +G T +GIVG+KDP RPGV ++V C+ AG+T+
Sbjct: 613 AASSLRCIAFAHKIASN----DSVLEEDGLTLMGIVGLKDPCRPGVSKAVETCKLAGVTI 668
Query: 680 RMVTGDNINTAKAIARECGILTDNG-----IAIEGPEFREKSDEELSKLIPKIQVMARSS 734
+M+TGDN+ TAKAIA ECGIL N +EG +FR +DEE + + KI+VMARSS
Sbjct: 669 KMITGDNVFTAKAIAFECGILDHNDKDEEDAVVEGVQFRNYTDEERMQKVDKIRVMARSS 728
Query: 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDD 794
P DK +VK LR G VVAVTGDGTNDAPAL EADIGL+MGI GTEVAKES+D++ILDD
Sbjct: 729 PSDKLLMVKCLRLK-GHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDD 787
Query: 795 NFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMI 854
NF+++ TV KWGR VY NIQKF+QFQLTVNV AL++NF +A G PLTAVQLLWVN+I
Sbjct: 788 NFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFIAAISAGEVPLTAVQLLWVNLI 847
Query: 855 MDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAV 914
MDTLGALALATE P +L+KR PVGR I+NVMWRN+L QSLYQ ++ LQ +G ++
Sbjct: 848 MDTLGALALATERPTNELLKRKPVGRTEALITNVMWRNLLVQSLYQIAVLLILQFKGMSI 907
Query: 915 FRLDGPDPDLILNTLIFNTFVFCQL 939
F + D TLIFNTFV CQ+
Sbjct: 908 FSVRKEVKD----TLIFNTFVLCQV 928
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| DICTYBASE|DDB_G0289473 DDB_G0289473 "Ca2+-ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1027 (366.6 bits), Expect = 3.2e-186, Sum P(2) = 3.2e-186
Identities = 222/455 (48%), Positives = 301/455 (66%)
Query: 500 LLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEF-GLLLGGDFQAERQASK--IVKVE 556
LL + I N+ + + +G+ TE A+LE+ + ++ R+ +K +VKV
Sbjct: 454 LLAEGISLNSTAYIEKHTDRLNDHIGSKTECALLEWLETMPNQSYETVRKENKDRVVKVY 513
Query: 557 PFNSVKKQMGVVIELPE---GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLN 613
PF+S KK V++ + GG ++ KGA+EI+L C ++ NGE ++ L
Sbjct: 514 PFSSEKKMSAVLMNQNQNISGGLIIYVKGAAEIVLNNCTNIVDKNGESTQMSRDEKMLLQ 573
Query: 614 ETIEKFASEALRTLCLACMEIGNEFSAD--APIPTEGYTCIGIVGIKDPMRPGVKESVAI 671
+ IE FASE LRTL LA EI NE S++ A + G T +G+VGIKDP+R V +V
Sbjct: 574 KDIEIFASEGLRTLVLAYKEINNEPSSEDEAKVIYTGLTFLGLVGIKDPVRKEVPRAVKR 633
Query: 672 CRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMA 731
C+ AGI VRM+TGDNI TAK IARECGIL D G+AIEGP+FR +D++L +IP +QV+A
Sbjct: 634 CQGAGIFVRMLTGDNILTAKNIARECGILKDGGVAIEGPQFRLLTDDQLDTIIPHLQVIA 693
Query: 732 RSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVII 791
R SP DK LV LR LGEVVAVTGDG NDAP L EAD+G +MGIAGTEVAKE++D+++
Sbjct: 694 RCSPTDKFRLVHRLRE-LGEVVAVTGDGVNDAPQLKEADVGFSMGIAGTEVAKEASDIVL 752
Query: 792 LDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWV 851
LDDNF++I WGR+VY +I+KF+QFQLTVN+VA+++ F + G +PL VQLLWV
Sbjct: 753 LDDNFNSIAKAVIWGRNVYDSIRKFIQFQLTVNIVAVLIAFVGSITNGESPLRPVQLLWV 812
Query: 852 NMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRG 911
N+IMDTLGALAL+TEPP+ +L R P GR + I+ MWRNI+GQS+YQ ++ +
Sbjct: 813 NLIMDTLGALALSTEPPSEELFNRRPYGRFDSLITYRMWRNIIGQSIYQIAFLFSIMYSA 872
Query: 912 KAVFRL-DGPDPD-------LILNTLIFNTFVFCQ 938
++ L D P D + +T+IFNTFVFCQ
Sbjct: 873 ASMVELFDLPRVDQWTTNDKTVYHTIIFNTFVFCQ 907
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q6ATV4 | ACA2_ORYSJ | 3, ., 6, ., 3, ., 8 | 0.7254 | 0.8920 | 0.8557 | no | no |
| Q2QMX9 | ACA1_ORYSJ | 3, ., 6, ., 3, ., 8 | 0.7933 | 0.9475 | 0.9205 | yes | no |
| O81108 | ACA2_ARATH | 3, ., 6, ., 3, ., 8 | 0.7926 | 0.9535 | 0.9319 | no | no |
| Q37145 | ACA1_ARATH | 3, ., 6, ., 3, ., 8 | 0.8285 | 0.9475 | 0.9205 | yes | no |
| O64806 | ACA7_ARATH | 3, ., 6, ., 3, ., 8 | 0.7812 | 0.9535 | 0.9310 | no | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_Genewise1_v1.C_LG_XIV0616 | hypothetical protein (1020 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 991 | |||
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 0.0 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-136 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-129 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-121 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-102 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 7e-70 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 1e-67 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 4e-62 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 2e-56 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 7e-56 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 7e-52 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 7e-52 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 4e-42 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 2e-31 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 7e-31 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 8e-28 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-27 | |
| pfam00689 | 175 | pfam00689, Cation_ATPase_C, Cation transporting AT | 4e-27 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 2e-26 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 7e-26 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 2e-24 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 5e-24 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 7e-22 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 3e-21 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 7e-21 | |
| pfam12515 | 47 | pfam12515, CaATP_NAI, Ca2+-ATPase N terminal autoi | 3e-20 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 3e-17 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 3e-16 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 4e-16 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 3e-14 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 4e-12 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 1e-11 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 9e-10 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 2e-08 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 5e-08 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 3e-07 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 8e-07 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 4e-05 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 4e-05 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 8e-05 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 8e-05 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 2e-04 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 2e-04 | |
| COG0561 | 264 | COG0561, Cof, Predicted hydrolases of the HAD supe | 5e-04 | |
| COG4069 | 367 | COG4069, COG4069, Uncharacterized protein conserve | 0.002 | |
| TIGR01487 | 215 | TIGR01487, Pglycolate_arch, phosphoglycolate phosp | 0.003 | |
| pfam12710 | 122 | pfam12710, HAD, haloacid dehalogenase-like hydrola | 0.004 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 1063 bits (2750), Expect = 0.0
Identities = 438/857 (51%), Positives = 583/857 (68%), Gaps = 27/857 (3%)
Query: 101 DELGSIVEG--HDIKKLKVH-----GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGIN 153
++G + DI K + GG EGIA KL T + +G+ S L RR+++YG N
Sbjct: 18 FDVGVSILTDLTDIFKRAMPLYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKN 77
Query: 154 KFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGI-----ATEGWPKGAHDGLGIVM 208
+ E P + F VW AL D TL++L+V A+VSLV+G+ G +G+ I++
Sbjct: 78 ELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILV 137
Query: 209 SILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGD 268
S++LVV VTA +DYK+ LQF+ L+REK + V R G ++ISI+D++ GDIV L GD
Sbjct: 138 SVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGD 197
Query: 269 QVPADGLFVSGFSVLINESSLTGESEPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVGMRT 327
VPADG+F+SG S+ I+ESS+TGES+P+ + +PFLLSGT V GS +MLVT VG+ +
Sbjct: 198 VVPADGVFISGLSLEIDESSITGESDPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNS 257
Query: 328 QWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHW 387
GKLM L + G+D TPLQ KL+ +A +IGK G+ AV+ F V+ R ++
Sbjct: 258 FGGKLMMELRQAGEDSTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRD 317
Query: 388 TWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETM 447
T +DA L+ F IAVTIVVVAVPEGLPLAVT++LA++MKKMM D LVRHLAACETM
Sbjct: 318 T--EEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETM 375
Query: 448 GSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFN 507
GSAT+ICSDKTGTLT N M+V++ I E+ V + ++P +L++ I
Sbjct: 376 GSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRD------VLRNVPKHVRNILVEGISL 429
Query: 508 NTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGV 567
N+ E V+ G K +G+ TE A+L+FGLLL D+Q R K+VK+ PFNS +K M V
Sbjct: 430 NSSSEEVVDRGGKRAFIGSKTECALLDFGLLLLRDYQEVRAEEKVVKIYPFNSERKFMSV 489
Query: 568 VIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTL 627
V++ G +R KGASEI+L C K L+SNGE P+++ + + IE AS+ALRT+
Sbjct: 490 VVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCADVIEPLASDALRTI 549
Query: 628 CLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNI 687
CLA + E P +G T IG+VGIKDP+RPGV+E+V C+ AGITVRMVTGDNI
Sbjct: 550 CLAYRDFAPEEFPRKDYPNKGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNI 609
Query: 688 NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747
+TAKAIAR CGILT G+A+EG EFR EE+ ++PK++V+ARSSP+DK LV L+
Sbjct: 610 DTAKAIARNCGILTFGGLAMEGKEFRSLVYEEMDPILPKLRVLARSSPLDKQLLVLMLK- 668
Query: 748 TLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGR 807
+GEVVAVTGDGTNDAPAL AD+G +MGI+GTEVAKE++D+I+LDDNF++IV KWGR
Sbjct: 669 DMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGR 728
Query: 808 SVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEP 867
+VY NI+KF+QFQLTVNVVA+I+ F +C++ +PLTAVQLLWVN+IMDTL ALALATEP
Sbjct: 729 NVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEP 788
Query: 868 PNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPD-----P 922
P L+ R P+GR IS MW+NILGQ+ YQ ++ + L G ++F + GPD
Sbjct: 789 PTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQ 848
Query: 923 DLILNTLIFNTFVFCQL 939
LNT++FNTFV QL
Sbjct: 849 QGELNTIVFNTFVLLQL 865
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 614 bits (1585), Expect = 0.0
Identities = 302/839 (35%), Positives = 431/839 (51%), Gaps = 62/839 (7%)
Query: 124 IAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCA 183
+ +L TS T G+S E + RR + YG N+ E R D +++L V A
Sbjct: 33 LLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAA 90
Query: 184 LVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVA 243
L+S VG W D + I++ +++ + +Y+ + L ++ +V
Sbjct: 91 LLSAFVGD----WVDAGVDAIVILLVVVINALLGFVQEYRAEKALEAL-KKMSSPKAKVL 145
Query: 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL-- 301
R+G +I +L+PGDIV L GD VPAD + + ++ES+LTGES PV AL
Sbjct: 146 RDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQALPL 205
Query: 302 -----------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKL 350
+ L SGT V +G K +V G T++GK+ L + +TPLQ KL
Sbjct: 206 TKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKL 265
Query: 351 NGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVV 410
N + + + L + F V GLF G+ LE A+ + V
Sbjct: 266 NKLGKFLLVLALVLGALVFVV---GLFRG-----------GNGLLESFLT---ALALAVA 308
Query: 411 AVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLK 470
AVPEGLP VT++LA ++M D A+VR L A ET+GS ICSDKTGTLT N MTV K
Sbjct: 309 AVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKK 368
Query: 471 ACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTET 530
I K++D+ + + LL + N+ V E N G PTE
Sbjct: 369 IYINGGGKDIDDKDLKD------SPALLRFLLAAALCNS----VTPEKNGWYQAGDPTEG 418
Query: 531 AILEFGLLLGG--DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIIL 588
A++EF LG D I+ PF+S +K+M V+++ EG + + KGA E+IL
Sbjct: 419 ALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVIL 478
Query: 589 AACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIG-NEFSADAPIPTE 647
C S GE+ PL E + L E +++ ASE LR L +A ++ E +
Sbjct: 479 ERCK----SIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIES 534
Query: 648 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGI 705
+G+ GI+DP R VKE++ R AGI V M+TGD++ TA AIA+ECGI + + +
Sbjct: 535 DLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESAL 594
Query: 706 AIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPA 765
I+G E SDEEL++L+ ++ V AR SP K +V+ L+ G VVA+TGDG NDAPA
Sbjct: 595 VIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQK-SGHVVAMTGDGVNDAPA 653
Query: 766 LHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNV 825
L AD+G+AMG GT+ AKE+AD+++LDDNF+TIV GR VY+NI+KF+ + L+ NV
Sbjct: 654 LKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNV 713
Query: 826 VA-LIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNF 884
L + S PLT +QLLW+N++ D+L ALAL E P D+MKR P G +
Sbjct: 714 GEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGL 773
Query: 885 ISN-VMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLI---LNTLIFNTFVFCQL 939
+ + WR IL L ++ F + DL L T F V QL
Sbjct: 774 FNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQL 832
|
Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 430 bits (1108), Expect = e-136
Identities = 263/850 (30%), Positives = 429/850 (50%), Gaps = 94/850 (11%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWV-YVWEALHDMTLMIL 179
VE KL T + +G+++S+ +RR +G N+F W ++ + + + +++L
Sbjct: 9 VEETCSKLQTDLQNGLNSSQEASHRRA-FHGWNEFDVEEDESLWKKFLSQFVKNPLILLL 67
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
A++S+ +G D + I ++IL+VV V +Y+ + L++
Sbjct: 68 IASAVISVFMG--------NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPP-E 118
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVN-- 297
+ R G + L+PGD+V L +GD+VPAD V + I+ES+LTGE+ PV+
Sbjct: 119 CHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKV 178
Query: 298 ---VNALNPFLLS--------GTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPL 346
+ A L+ GT V+ G K +V G T++G + + +TPL
Sbjct: 179 TAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPL 238
Query: 347 QVKLNGVATIIGKIGLFFAVVTFAV----MVQGLFTRKLQEGTHWTWSGDDALEILEFFA 402
Q ++ +G ++V+F V + G F +G W LE F
Sbjct: 239 QKSMD-------LLGKQLSLVSFGVIGVICLVGWF-----QGKDW----------LEMFT 276
Query: 403 IAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLT 462
I+V++ V A+PEGLP+ VT++LA + +M +A+VR L + ET+GS ICSDKTGTLT
Sbjct: 277 ISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLT 336
Query: 463 TNHMTVLKACICEEIKEVDNSKGTPAFGSSI-----------PASASKLLLQSIFNNTGG 511
NHMTV K + + + N+ FG I A + L ++ NN
Sbjct: 337 KNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNA-- 394
Query: 512 EVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIEL 571
+LG PT+ A++E + G R+ V PF+S +K M V
Sbjct: 395 ---KFRNEADTLLGNPTDVALIELLMKFG--LDDLRETYIRVAEVPFSSERKWMAVKCVH 449
Query: 572 PEGGFR-VHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLA 630
+ KGA E +L C + +G+ + L + + + E + AS LR + A
Sbjct: 450 RQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFA 509
Query: 631 CMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTA 690
+ T +G+VGI DP RPGVKE+V + G+ + M+TGD+ TA
Sbjct: 510 SGPEKGQL-----------TFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETA 558
Query: 691 KAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG 750
+IAR G+ + ++ G + D++LS+++PK+ V AR+SP K +VK L+ G
Sbjct: 559 VSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQK-RG 617
Query: 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVY 810
+VVA+TGDG NDAPAL ADIG+AMG GT+VAKE+AD+I+ DD+F+TI++ + G+ ++
Sbjct: 618 DVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIF 677
Query: 811 INIQKFVQFQLTVNVVAL-IVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPN 869
NI+ F+ FQL+ +V AL ++ ++ N PL A+Q+LW+N++MD A +L EP +
Sbjct: 678 NNIKNFITFQLSTSVAALSLIALATLMGFPN-PLNAMQILWINILMDGPPAQSLGVEPVD 736
Query: 870 GDLMKRSPVGRKGNFISNVMWRNILGQS---LYQFLIIWYLQTRGKAVFRLDGPDPDLIL 926
D+M++ P R ++ + + IL + + L ++ + + + D
Sbjct: 737 KDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQDGVITARD-------- 788
Query: 927 NTLIFNTFVF 936
T+ F FVF
Sbjct: 789 TTMTFTCFVF 798
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 412 bits (1061), Expect = e-129
Identities = 256/793 (32%), Positives = 374/793 (47%), Gaps = 101/793 (12%)
Query: 167 VWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIV--MSILLVVFVTATSDYKQ 224
V E D+ + IL + A VS V+ EG V ILL++ A Q
Sbjct: 1 VLEQFEDLLVRILLLAACVSFVLAWFEEG----EETVTAFVEPFVILLILVANAIVGVWQ 56
Query: 225 SL-------QFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFV 277
K+ + E K V R+G I DL+PGDIV L +GD+VPAD +
Sbjct: 57 ERNAEKAIEALKEYESEHAK----VLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVL 112
Query: 278 SGFSVLINESSLTGESEPVNV--------NALNP----FLLSGTKVQNGSCKMLVTTVGM 325
S ++ +++S LTGES VN A+N L SGT V G + +V GM
Sbjct: 113 SLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGM 172
Query: 326 RTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGT 385
T+ GK+ + ++TPLQ KL+ ++ K+ ++ + + + L G
Sbjct: 173 STEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGW 232
Query: 386 HWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACE 445
+ +F IAV + V A+PEGLP +T LA +KM A+VR L + E
Sbjct: 233 --------IQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVE 284
Query: 446 TMGSATSICSDKTGTLTTNHMTVLKACICE----EIKE--VDNSKGTPAFGS----SIPA 495
T+G T ICSDKTGTLTTN M+V K + + E V + P G A
Sbjct: 285 TLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVA 344
Query: 496 SASKLLL-------------QSIFNNTGGEVVIGEGNKTEILGTPTETAIL-------EF 535
L FN G E +G TE A+
Sbjct: 345 GGQDAGLEELATIAALCNDSSLDFNERKGVY--------EKVGEATEAALKVLVEKMGLP 396
Query: 536 GLLLGGDFQAERQ----------ASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASE 585
G + K+ +E F+ +K M V+ + P G ++ KGA E
Sbjct: 397 ATKNGVSSKRRPALGCNSVWNDKFKKLATLE-FSRDRKSMSVLCK-PSTGNKLFVKGAPE 454
Query: 586 IILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFAS-EALRTLCLACMEIGNEFSADAPI 644
+L C LN +G VPL + N + I++ + +ALR L LA +I + D
Sbjct: 455 GVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLS 514
Query: 645 PTEGY-------TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC 697
+ T IG+VG+ DP RP V +++ CR+AGI V M+TGDN TA+AI R
Sbjct: 515 DPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRI 574
Query: 698 GILTDN----GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVV 753
GI + + + G EF E + + +R P K LV+ L+ GE+V
Sbjct: 575 GIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQE-QGEIV 633
Query: 754 AVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813
A+TGDG NDAPAL +ADIG+AMG +GTEVAKE++D+++ DDNF+TIV + GR++Y N+
Sbjct: 634 AMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNM 692
Query: 814 QKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLM 873
++F+++ ++ N+ ++ F +A L L VQLLWVN++ D L A AL PP+ D+M
Sbjct: 693 KQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIM 752
Query: 874 KRSPVGRKGNFIS 886
+ P I+
Sbjct: 753 WKPPRRPDEPLIT 765
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 379 bits (976), Expect = e-121
Identities = 199/668 (29%), Positives = 303/668 (45%), Gaps = 140/668 (20%)
Query: 206 IVMSILLVVFVT-ATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHL 264
+++ +LLVV D +SL DR V RNG ++I DL+PGD+V +
Sbjct: 6 VLVFVLLVVKQKLKAEDILRSLS----DRLVNTRPATVLRNG-WKEIPAKDLVPGDVVLV 60
Query: 265 CMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF---------LLSGTKVQNGS 315
G+ VPADG+ +SG S ++ES+LTGES PV AL + +GT V G+
Sbjct: 61 KSGETVPADGVLLSG-SCFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGT 119
Query: 316 CKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQG 375
++VT G+ T G++ + G + TPLQ K + + I + L + + +
Sbjct: 120 LIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIFILFLLLLALAVFLYLFI 179
Query: 376 LFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDK 435
D I + A+ ++V+ VP LP AVT++LA ++
Sbjct: 180 RGW--------------DPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKG 225
Query: 436 ALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPA 495
LVR+L A E +G +CSDKTGTLT N MT+ I + +
Sbjct: 226 ILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDG-----GKEDNSSSL------ 274
Query: 496 SASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKV 555
V + N + G P E A+L+ L+G + KI+ V
Sbjct: 275 ------------------VACDNN--YLSGDPMEKALLKSAELVGKAD-KGNKEYKILDV 313
Query: 556 EPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNET 615
PF+SV K+M V++E P+G + KGA E IL C N+ E
Sbjct: 314 FPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERC------------------NNYEEK 355
Query: 616 IEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSA 675
+ A + LR L A + + +G++ +DP+RP KE++ ++A
Sbjct: 356 YLELARQGLRVLAFA----------SKELEDD-LEFLGLITFEDPLRPDAKETIEELKAA 404
Query: 676 GITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735
GI V M+TGDN+ TAKAIA+E GI V AR SP
Sbjct: 405 GIKVVMITGDNVLTAKAIAKELGID----------------------------VFARVSP 436
Query: 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
K +V+ L+ G +VA+TGDG NDAPAL +AD+G+AMG AK +AD+++LDD+
Sbjct: 437 EQKLQIVEALQ-KKGHIVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDD 489
Query: 796 FSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIM 855
S IV K GR ++ NI+ + + + N++ + + + +++
Sbjct: 490 LSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIV--------------IILLL 535
Query: 856 DTLGALAL 863
L ALAL
Sbjct: 536 PMLAALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 342 bits (878), Expect = e-102
Identities = 255/821 (31%), Positives = 400/821 (48%), Gaps = 96/821 (11%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIY---GINKFTESPARGFWVYVWEALHDMTLM 177
++ + K T ++ G+S + R EI G N T P WV L M
Sbjct: 22 LDELERKYGTDLSKGLSAA-----RAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSM 76
Query: 178 ILAVCALVSLVV-GI--ATEGWPKGAHDGLGIVMSILLVVFVTAT-SDYKQSLQFKDLDR 233
+L + A++ + GI +TE P+ + LG+V+S VV +T S Y+++ K ++
Sbjct: 77 LLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLS--AVVIITGCFSYYQEAKSSKIMES 134
Query: 234 EKKKITVQ--VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTG 291
K + Q V R+G + I+ ++ GD+V + GD++PAD +S ++ SSLTG
Sbjct: 135 FKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVDNSSLTG 194
Query: 292 ESEP-------VNVNAL---NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG-G 340
ESEP + N L N S V+ G+ + +V G RT G++ A+L+ G
Sbjct: 195 ESEPQTRSPEFTHENPLETRNIAFFSTNCVE-GTARGIVVNTGDRTVMGRI-ASLASGLE 252
Query: 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEF 400
+ +TP+ +++ II + +F V F + L G W LE + F
Sbjct: 253 NGKTPIAIEIEHFIHIITGVAVFLGVSFFIL--------SLILGYTW-------LEAVIF 297
Query: 401 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGT 460
+ I+V VPEGL VT+ L K+M LV++L A ET+GS ++ICSDKTGT
Sbjct: 298 L---IGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGT 354
Query: 461 LTTNHMTVLKACICEEIKEVDNSKGTP--AFGSSIPASASKLLLQSIFNNTGGEVVIGEG 518
LT N MTV +I E D ++ +F S + + + N G+
Sbjct: 355 LTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNR--AVFKAGQE 412
Query: 519 N----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEG 574
N K + G +E+A+L+ L G R+ + V PFNS K + E +
Sbjct: 413 NVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDP 472
Query: 575 GFRVHC---KGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLAC 631
H KGA E IL C L +G+ PL+E + R L
Sbjct: 473 RDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCH 531
Query: 632 MEI-------GNEFSADA-PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVT 683
+ + G +F D PT+ +G++ + DP R V ++V CRSAGI V MVT
Sbjct: 532 LYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVT 591
Query: 684 GDNINTAKAIARECGILTDNG-----IA-------------------IEGPEFREKSDEE 719
GD+ TAKAIA+ GI+++ IA + G + ++ + E+
Sbjct: 592 GDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQ 651
Query: 720 LSKLI---PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776
L +++ +I V AR+SP K +V+ + G +VAVTGDG ND+PAL +ADIG+AMG
Sbjct: 652 LDEILKYHTEI-VFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMG 709
Query: 777 IAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSAC 836
IAG++V+K++AD+I+LDDNF++IVT + GR ++ N++K + + LT N+ +
Sbjct: 710 IAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFII 769
Query: 837 LTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSP 877
PL + +L +++ D + A++LA E D+MKR P
Sbjct: 770 ANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQP 810
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 249 bits (638), Expect = 7e-70
Identities = 203/769 (26%), Positives = 336/769 (43%), Gaps = 108/769 (14%)
Query: 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLM 177
G E + KL T G++ E + R +G N+ E + A ++ +
Sbjct: 17 QMGKETLLRKLGVHET-GLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIY 73
Query: 178 ILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKK 237
ILA+ VS + D L + I L+V + + Q + + K
Sbjct: 74 ILAMLMGVSYLT------------DDLEATVIIALMVLASGLLGFIQESRAERAAYALKN 121
Query: 238 I---TVQVAR------NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESS 288
+ T V R NG ++ I L+PGD++ L GD +PAD +S + IN+S+
Sbjct: 122 MVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSA 181
Query: 289 LTGESEPV-------NVNALNPF-----LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL 336
LTGES PV GT V +G + +V G T +G L
Sbjct: 182 LTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAA 241
Query: 337 SEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALE 396
+E T + V+ ++ + L V M+ GL W
Sbjct: 242 TERRGQ-TAFDKGVKSVSKLLIRFMLVMVPVVL--MINGL--------MKGDW------- 283
Query: 397 ILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSD 456
LE F A+ + V PE LP+ V+ +LA M K +V+ L+A + G+ +C+D
Sbjct: 284 -LEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTD 342
Query: 457 KTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNN---TGGEV 513
KTGTLT + + E K +D+S G + ++L + N+ TG +
Sbjct: 343 KTGTLTQDKI--------ELEKHIDSS-GETS---------ERVLKMAWLNSYFQTGWKN 384
Query: 514 VIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQ-ASKIVKVE--PFNSVKKQMGVVIE 570
V+ + A+L D A RQ AS+ KV+ PF+ ++++ VV+E
Sbjct: 385 VL-------------DHAVLAKL-----DESAARQTASRWKKVDEIPFDFDRRRLSVVVE 426
Query: 571 LPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLA 630
R+ CKGA E +L C G VV L+E+ + L + + + +R + +A
Sbjct: 427 NRAEVTRLICKGAVEEMLTVCTH-KRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVA 485
Query: 631 CMEI---GNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNI 687
+ +F+ E G +G DP + KE++A GI V+++TGDN
Sbjct: 486 TKTLKVGEADFTK---TDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNE 542
Query: 688 NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747
I +E GI D + G + E SDEEL++ + K + AR +PM K ++ L+
Sbjct: 543 IVTARICQEVGI--DANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKK 600
Query: 748 TLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGR 807
G V GDG NDAPAL +AD+G+++ A ++AKE++D+I+L+ + + GR
Sbjct: 601 A-GHTVGFLGDGINDAPALRKADVGISVDTA-ADIAKEASDIILLEKSLMVLEEGVIEGR 658
Query: 808 SVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMD 856
+ + NI K+++ + N + ++ P+ ++ LL N++ D
Sbjct: 659 NTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD 707
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 241 bits (616), Expect = 1e-67
Identities = 191/723 (26%), Positives = 320/723 (44%), Gaps = 125/723 (17%)
Query: 135 GISTSEHLLNRRKEIYGINKFTE---SPARGFWVYVWEALHDMTLMILAVCALVSLVVGI 191
G++++E +R YG N+ E SP F + W L + + A+++ I
Sbjct: 1 GLTSAE--AKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWV----MEAAAIIA----I 50
Query: 192 ATEGWPKGAHDGLGIVMSILL---VVFV------TATSDYKQSLQFKDLDREKKKITVQV 242
A E W D + I+ +LL + F+ A KQSL K +V
Sbjct: 51 ALENWV----DFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPK----------ARV 96
Query: 243 ARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA-L 301
R+G ++I +L+PGD+V L +GD VPAD G + +++++LTGES PV
Sbjct: 97 LRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGD 156
Query: 302 NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIG 361
+ SG+ V+ G + +VT GM T +GK A + LQ I+ KIG
Sbjct: 157 IAY--SGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQK-------ILSKIG 207
Query: 362 LF---FAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418
LF V + + LF + G+ E L+F A+ ++V +P +P
Sbjct: 208 LFLIVLIGVLVLIELVVLFFGR----------GESFREGLQF---ALVLLVGGIPIAMPA 254
Query: 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478
+++++A ++ KA+V L A E + +CSDKTGTLT N +++ +
Sbjct: 255 VLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGF 314
Query: 479 EVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLL 538
+ D+ A S E +TA+L G
Sbjct: 315 DKDDVLLYAALASRE-----------------------EDQD------AIDTAVL--GSA 343
Query: 539 LGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHC-KGASEIILAACDKFLNS 597
D + R K+++ PF+ V K+ +E PE G R KGA ++IL CD
Sbjct: 344 K--DLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCD----- 396
Query: 598 NGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGI 657
+ E + E +++ AS R L +A D + +G++ +
Sbjct: 397 --NKKEIEEK----VEEKVDELASRGYRALGVA--------RTDEE---GRWHFLGLLPL 439
Query: 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREK 715
DP R KE++ R G+ V+MVTGD++ AK AR G+ T+ + + R+
Sbjct: 440 FDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDD 499
Query: 716 SDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 775
L +++ A P K+ +V+ L+ G +V +TGDG NDAPAL +AD+G+A
Sbjct: 500 LPSGLGEMVEDADGFAEVFPEHKYEIVEILQ-KRGHLVGMTGDGVNDAPALKKADVGIA- 557
Query: 776 GIAG-TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 834
+AG T+ A+ +AD+++ + S IV R ++ ++ +V +++ + ++ F
Sbjct: 558 -VAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAET-IRIVFFFGL 615
Query: 835 ACL 837
L
Sbjct: 616 LIL 618
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 227 bits (581), Expect = 4e-62
Identities = 199/754 (26%), Positives = 339/754 (44%), Gaps = 106/754 (14%)
Query: 133 TDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIA 192
+G++ +E + +E +G N+ +WV++W + ++L + +S A
Sbjct: 65 PEGLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISY----A 118
Query: 193 TEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKI--TVQVARNG---- 246
TE L + +S LL A S K D K + T V R
Sbjct: 119 TEDLFAAGVIALMVAISTLLNFIQEARST-------KAADALKAMVSNTATVLRVINDKG 171
Query: 247 --FRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPV-------N 297
+I I L+PGDI+ L GD +PAD + + + ++SLTGES PV
Sbjct: 172 ENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQ 231
Query: 298 VNALNPF-----LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNG 352
NP GT V +G+ + +V G T +G+L +SE + Q ++
Sbjct: 232 PEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISR 291
Query: 353 VATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAV 412
V+ ++ + F V+ V++ +T+ G W E A+++ V
Sbjct: 292 VSWLLIR---FMLVMAPVVLLINGYTK----GDWW-----------EAALFALSVAVGLT 333
Query: 413 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKAC 472
PE LP+ VT +LA K+ K +V+ L A + G+ +C+DKTGTLT + + VL
Sbjct: 334 PEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKI-VL--- 389
Query: 473 ICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNN----TGGEVVIGEGNKTEILGTPT 528
T G + S+ +L S + N TG L
Sbjct: 390 ----------ENHTDISGKT-----SERVLHSAWLNSHYQTG-------------LKNLL 421
Query: 529 ETAILEFGLLLGGDFQAERQ-ASKIVKVE--PFNSVKKQMGVVIELPEGGFRVHCKGASE 585
+TA+LE G D ++ R AS+ K++ PF+ +++M VV+ ++ CKGA E
Sbjct: 422 DTAVLE-----GVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALE 476
Query: 586 IILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIP 645
IL C + + NGE+VPL++ + + + + LR + +A +
Sbjct: 477 EILNVCSQ-VRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRAD 535
Query: 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI 705
G + DP + ++ +++G+TV+++TGD+ A + E G+ D G
Sbjct: 536 ESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGL--DAGE 593
Query: 706 AIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPA 765
+ G + SD+EL+ L + + AR +PM K +V L+ G VV GDG NDAPA
Sbjct: 594 VLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKRE-GHVVGFMGDGINDAPA 652
Query: 766 LHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTV-- 823
L ADIG+++ ++A+E+AD+I+L+ + + GR + N+ K+++ +
Sbjct: 653 LRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNF 711
Query: 824 -NVVALIVNFSSACLTGNAPLTAVQLLWVNMIMD 856
NV +++V +SA L P+ + LL N++ D
Sbjct: 712 GNVFSVLV--ASAFLP-FLPMLPLHLLIQNLLYD 742
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 210 bits (537), Expect = 2e-56
Identities = 207/782 (26%), Positives = 346/782 (44%), Gaps = 127/782 (16%)
Query: 127 KLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVS 186
L+T G++ + R + YG N+ V + +A ++ + +L V A +S
Sbjct: 38 NLNTH-RQGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAIS 94
Query: 187 LVVGIATEGW---PKGAHDGLGIVMSILLVVFVTATSDYKQSLQ-------FKDLDREKK 236
T+ W +G L V+ IL +V ++ + Q + K + R
Sbjct: 95 FF----TDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVR--T 148
Query: 237 KITVQ----VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGE 292
TV RR+I + +L+PGDIVHL GD +PAD + + I+++ LTGE
Sbjct: 149 TATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGE 208
Query: 293 SEPV----------------------NVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWG 330
+ PV ++ L GT V +G+ +V G RT +G
Sbjct: 209 ALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFG 268
Query: 331 KLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWS 390
L ++ G +T +N V+ ++ I +V +++ G T W
Sbjct: 269 SLAKSIV-GTRAQTAFDRGVNSVSWLL--IRFMLVMVPVVLLINGF--------TKGDWL 317
Query: 391 GDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSA 450
+AL FA+AV V PE LP+ V+ +LA M K +V+ L A + G+
Sbjct: 318 --EAL----LFALAVA--VGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAM 369
Query: 451 TSICSDKTGTLTTN-----HMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSI 505
+C+DKTGTLT + H + E + ++ A+ +S S K L+
Sbjct: 370 DVLCTDKTGTLTQDRIILEHHLDVSGRKDERVLQL-------AWLNSFHQSGMKNLM--- 419
Query: 506 FNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQM 565
+ A++ F + K+ ++ PF+ V++++
Sbjct: 420 -----------------------DQAVVAFAEGNP-EIVKPAGYRKVDEL-PFDFVRRRL 454
Query: 566 GVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALR 625
VV+E +G + CKGA E +LA + V PL+EA L E + ++ R
Sbjct: 455 SVVVEDAQGQHLLICKGAVEEMLAVATH-VRDGDTVRPLDEARRERLLALAEAYNADGFR 513
Query: 626 TLCLACMEIGNEFSADAPIPTE---GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMV 682
L +A EI + A T G + DP + ++A R G+ V+++
Sbjct: 514 VLLVATREIPGG-ESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVL 572
Query: 683 TGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741
TGDN I TAK I RE G+ + G + G E D L++ + + V A+ +P+ K +
Sbjct: 573 TGDNPIVTAK-ICREVGL--EPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRV 629
Query: 742 VKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVT 801
+K L+ G V GDG NDAPAL +AD+G+++ +G ++AKESAD+I+L+ + +
Sbjct: 630 LKALQAN-GHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEE 687
Query: 802 -VAKWGRSVYINIQKFVQFQLTV-----NVVALIVNFSSACLTGNAPLTAVQLLWVNMIM 855
V K GR + NI K++ +T NV +++V +SA + P+ A+ LL N++
Sbjct: 688 GVIK-GRETFGNIIKYL--NMTASSNFGNVFSVLV--ASAFIPF-LPMLAIHLLLQNLMY 741
Query: 856 DT 857
D
Sbjct: 742 DI 743
|
Length = 903 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 192 bits (490), Expect = 7e-56
Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 20/237 (8%)
Query: 210 ILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQ 269
+L+ + A +Y+ K L + V R+G +I +L+ GDIV L GD+
Sbjct: 6 VLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLKPGDR 65
Query: 270 VPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQW 329
VPADG + G S+ ++ES+LTGES PV + + +GT V +G K++VT G T+
Sbjct: 66 VPADGRIIEG-SLEVDESALTGESLPVEKSR-GDTVFAGTVVLSGELKVIVTATGEDTEL 123
Query: 330 GKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTW 389
GK+ + E +TPLQ L+ +A I+ I L A++ F + +
Sbjct: 124 GKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLI--------------WFFR 169
Query: 390 SGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACET 446
GD LE A+ ++V A PE LPLAV L+LA ++ LV++L+A ET
Sbjct: 170 GGD----FLEALLRALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 191 bits (488), Expect = 7e-52
Identities = 158/675 (23%), Positives = 276/675 (40%), Gaps = 141/675 (20%)
Query: 174 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVV-FVTATSDYKQSLQFKDLD 232
LM LA + + +G+ EG +++ + L+ + + + S L
Sbjct: 2 DLLMALA--TIAAYAMGLVLEGA---------LLLFLFLLGETLEERAKGRASDALSALL 50
Query: 233 REKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGE 292
+ +G ++ + +L GDIV + G+++P DG+ +SG S ++ES+LTGE
Sbjct: 51 ALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGES-EVDESALTGE 109
Query: 293 SEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNG 352
S PV + + +GT +GS + VT +G + +++ + E + P+Q +
Sbjct: 110 SMPVEKKEGDE-VFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQSSKAPIQRLADR 168
Query: 353 VATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAV 412
+A+ L A++TF V AL A+ ++VVA
Sbjct: 169 IASYYVPAVLAIALLTFVVW--------------LALGALGALYR------ALAVLVVAC 208
Query: 413 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKAC 472
P L LA +++ A+ L++ A E + ++ DKTGTLTT T
Sbjct: 209 PCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPT----- 263
Query: 473 ICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAI 532
+ +++ + A A+ L S + L AI
Sbjct: 264 ----VVDIEPLDDASISEEELLALAAALEQSS----------------SHPLAR----AI 299
Query: 533 LEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACD 592
+ +K +E + E+P G G E+ +
Sbjct: 300 VR--------------YAKKRGLELPKQEDVE-----EVPGKGVEATVDGGEEVRIGNPR 340
Query: 593 KFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCI 652
+ A+ + LNE + + + + + E +
Sbjct: 341 FLELAIEP----ISASPDLLNEGESQGKT-------VVFVAVDGEL-------------L 376
Query: 653 GIVGIKDPMRPGVKESVA-ICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
G++ ++D +RP KE++A + R+ GI + M+TGDN + A+A+A E GI
Sbjct: 377 GVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID----------- 425
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
+V A P DK +VK L+ G VVA+ GDG NDAPAL AD+
Sbjct: 426 ----------------EVHAELLPEDKLAIVKELQEE-GGVVAMVGDGINDAPALAAADV 468
Query: 772 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVN 831
G+AMG AG++VA E+AD+++L+D+ S++ T R I++ + + L N+VA+ +
Sbjct: 469 GIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLA 527
Query: 832 FSSACLTGNAPLTAV 846
G PL +
Sbjct: 528 -----AGGLLPLWLL 537
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 197 bits (503), Expect = 7e-52
Identities = 119/349 (34%), Positives = 178/349 (51%), Gaps = 31/349 (8%)
Query: 557 PFNSVKKQMGVVIELPEG-GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNE 614
PF+S K+M + E G + ++ KGA E I+ C +G ++ PL + +
Sbjct: 532 PFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIA 591
Query: 615 TIEKFASEALRTLCLACMEIGNEFSADAPIPTE---------GYTCIGIVGIKDPMRPGV 665
+E A+E LR L A + D + E +G++GI DP R
Sbjct: 592 NMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNES 651
Query: 666 KESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA----------IEGPEFREK 715
+V C AGI V M+TGD TAKAIA+E GI+ N I + G +F
Sbjct: 652 AGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDAL 711
Query: 716 SDEELSKLIPKIQVMARSSPMDKHTLVK--HLRTTLGEVVAVTGDGTNDAPALHEADIGL 773
SDEE+ L V+AR +P K +++ H R A+TGDG ND+P+L A++G+
Sbjct: 712 SDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAF---CAMTGDGVNDSPSLKMANVGI 768
Query: 774 AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNV---VALIV 830
AMGI G++VAK+++D+++ DDNF++I+ + GR ++ NI KFV L NV + LI+
Sbjct: 769 AMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLII 828
Query: 831 NFSSACLTGNA--PLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSP 877
+ G + PL+ V++LW MI A+ L E DLM R P
Sbjct: 829 GLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLP 877
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 167 bits (424), Expect = 4e-42
Identities = 195/904 (21%), Positives = 328/904 (36%), Gaps = 213/904 (23%)
Query: 129 STSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVW-EALHDMTLMILAVCALVSL 187
++G++T + +RK YG N+ E P F + E LH V + S+
Sbjct: 133 CAGHSNGLTTGDI--AQRKAKYGKNEI-EIPVPSFLELLKEEVLHP-----FYVFQVFSV 184
Query: 188 VVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGF 247
++ + E + SI L V+ KQ + +D+ K +V V RNG
Sbjct: 185 ILWLLDEYYYYSLCIVFMSSTSISLSVY----QIRKQMQRLRDM--VHKPQSVIVIRNGK 238
Query: 248 RRKISIYDLLPGDIVHLCMGDQ--VPADGLFVSGFSVLINESSLTGESEPVNVNAL---- 301
I+ +L+PGDIV + ++ +P D + +SG S ++NES LTGES PV +
Sbjct: 239 WVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVPVLKFPIPDNG 297
Query: 302 -------------NPFLLSGTKV-------QNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341
L GTK+ + C +V G T G+L+ ++
Sbjct: 298 DDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYP-- 355
Query: 342 DETPLQVKLNGVATIIGKIGLFFAVVTFA-VMVQGLFTRKLQEGTHWTWSGDDALEILEF 400
P K + A++ F +++ + D + +
Sbjct: 356 --KPRVFKFYKDSFKFILFLAVLALIGFIYTIIELI---------------KDGRPLGKI 398
Query: 401 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAAC------ETMGSATSIC 454
++ I+ + VP LP +++ + ++ L + C G C
Sbjct: 399 ILRSLDIITIVVPPALPAELSIGINNSLA------RLKKKGIFCTSPFRINFAGKIDVCC 452
Query: 455 SDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVV 514
DKTGTLT + + + +E K S P+ K L T +
Sbjct: 453 FDKTGTLTEDGLDLRGVQGLSGNQEFL--KIVTEDSSLKPSITHKALA------TCHSLT 504
Query: 515 IGEGNKTEILGTPTETAILEFGLLLGGDFQAERQAS------------------KIVKVE 556
EG ++G P + + E G + + +++ I++
Sbjct: 505 KLEGK---LVGDPLDKKMFEA---TGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRF 558
Query: 557 PFNSVKKQMGVVIELPEGGFRV-HCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNET 615
F+S ++M V++ + KGA E I + C E VP + E
Sbjct: 559 QFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP------ETVPSDYQ------EV 606
Query: 616 IEKFASEALRTLCLACMEIGN-EFSADAPIPTEGYTC----IGIVGIKDPMRPGVKESVA 670
++ + E R L LA E+ + + +G + ++P++P KE +
Sbjct: 607 LKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIK 666
Query: 671 ICRSAGITVRMVTGDNINTAKAIARECG-------------------------------- 698
+ A I M+TGDN TA +ARECG
Sbjct: 667 ELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSI 726
Query: 699 ---------------------ILTDNGIAIEGPEFR---EKSDEELSKLIPKIQVMARSS 734
+ + +A+ G F S E L +L+ V AR +
Sbjct: 727 PFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMA 786
Query: 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDD 794
P K TLV+ L+ L V + GDG ND AL +AD+G+++ A VA A
Sbjct: 787 PDQKETLVELLQ-KLDYTVGMCGDGANDCGALKQADVGISLSEAEASVA---APFTSKLA 842
Query: 795 NFSTIVTVAKWGRSVYIN-IQKF--------VQFQLTVNVVALI-VNFSSACLTGNAPLT 844
+ S + V + GR + Q F +QF +V+++ LI N
Sbjct: 843 SISCVPNVIREGRCALVTSFQMFKYMALYSLIQF-YSVSILYLIGSNLGD---------- 891
Query: 845 AVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLII 904
Q L +++++ AL ++ P L K P SN+ IL L QF++
Sbjct: 892 -GQFLTIDLLLIFPVALLMSRNKPLKKLSKERPP-------SNLFSVYILTSVLIQFVLH 943
Query: 905 WYLQ 908
Q
Sbjct: 944 ILSQ 947
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 131 bits (330), Expect = 2e-31
Identities = 147/621 (23%), Positives = 260/621 (41%), Gaps = 116/621 (18%)
Query: 208 MSILLVVFVTATSDYKQSLQFKDLDREKKK-ITVQVARNGFRRKISIYDLLPGDIVHLCM 266
+++L F A ++ + Q L KK + +G K+ L GDIV +
Sbjct: 75 ITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEA 134
Query: 267 GDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF--LLSGTKVQNGSCKMLVTTVG 324
GD +P DG + G + ++ES++TGES PV + F + GT++ + + T
Sbjct: 135 GDVIPCDGEVIEGVAS-VDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANP 193
Query: 325 MRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEG 384
T +++A + +TP ++ L ++ + L F +VT + +
Sbjct: 194 GETFLDRMIALVEGAQRRKTPNEIALT---ILLIALTLVFLLVTATLWPFAAY------- 243
Query: 385 THWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAAC 444
G +A+ + A+ V ++ + GL A+ ++ M +++ + A
Sbjct: 244 ------GGNAISVTVLVALLVCLIPTTI-GGLLSAIGIA---GMDRVLGFNVIATSGRAV 293
Query: 445 ETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQS 504
E G ++ DKTGT+T + S+ PA G A L S
Sbjct: 294 EACGDVDTLLLDKTGTITLGNRLA--------------SEFIPAQGVDEKTLADAAQLAS 339
Query: 505 IFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ 564
+ ++T P +I+ LG + + S F + +
Sbjct: 340 LADDT-----------------PEGKSIVILAKQLG--IREDDVQSLHATFVEFTAQTRM 380
Query: 565 MGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEAL 624
G+ ++ R+ KGA + I + + +NG +P + L++ +++ A +
Sbjct: 381 SGINLD----NGRMIRKGAVDAI----KRHVEANGGHIPTD------LDQAVDQVARQGG 426
Query: 625 RTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTG 684
L + N G++ +KD ++ G+KE A R GI M+TG
Sbjct: 427 TPLVVC---EDNRI-------------YGVIYLKDIVKGGIKERFAQLRKMGIKTIMITG 470
Query: 685 DNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 744
DN TA AIA E G+ D+ IA PE DK L++
Sbjct: 471 DNRLTAAAIAAEAGV--DDFIAEATPE-------------------------DKIALIRQ 503
Query: 745 LRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804
+ G++VA+TGDGTNDAPAL +AD+G+AM +GT+ AKE+A+++ LD + + ++ V
Sbjct: 504 EQAE-GKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVH 561
Query: 805 WGRSVYINIQKFVQFQLTVNV 825
G+ + I F + +V
Sbjct: 562 IGKQLLITRGALTTFSIANDV 582
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 7e-31
Identities = 64/180 (35%), Positives = 98/180 (54%), Gaps = 29/180 (16%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
+G++ + D +RP KE++A ++ GI V M+TGDN TA+AIA+E GI
Sbjct: 529 VGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI------------ 576
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
DE V A P DK +V+ L+ G VA+ GDG NDAPAL AD+
Sbjct: 577 -----DE----------VRAELLPEDKAEIVRELQAE-GRKVAMVGDGINDAPALAAADV 620
Query: 772 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVN 831
G+AMG +GT+VA E+ADV+++ D+ S + R+ I++ + + N +A+ +
Sbjct: 621 GIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLA 679
|
Length = 713 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 8e-28
Identities = 150/565 (26%), Positives = 239/565 (42%), Gaps = 125/565 (22%)
Query: 255 DLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF--LLSGTKVQ 312
+L GDIV + G+ +P+DG + G ++ES++TGES PV + F + GT+V
Sbjct: 122 ELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVL 180
Query: 313 NGSCKMLVTTVGMRTQWGKLMATLSEGGDDE-TPLQVKLN---GVATIIGKIGLFFAVVT 368
+ K+ +T T + M L EG + + TP ++ L T+I AV T
Sbjct: 181 SDWLKIRITANPGETFLDR-MIALVEGAERQKTPNEIALTILLSGLTLI----FLLAVAT 235
Query: 369 FAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAM 428
+SG A + A+ V ++ + GL A+ ++ M
Sbjct: 236 LYPFAI--------------YSGGGAASVTVLVALLVCLIPTTI-GGLLSAIGIA---GM 277
Query: 429 KKMMNDKALVRHLAACETMGSATSICSDKTGTLTT-NHMTVLKACICEEIKEVDNSKGTP 487
++ + A E G ++ DKTGT+T N S+ P
Sbjct: 278 DRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQA---------------SEFIP 322
Query: 488 AFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAER 547
G S A L S+ + T P +I+E LG + + +
Sbjct: 323 VPGVSEEELADAAQLASLADET-----------------PEGRSIVELAKKLGIELREDD 365
Query: 548 QASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEA 607
S V PF + + G ++LP G R KGA + I +++ G +P
Sbjct: 366 LQSHAEFV-PFTAQTRMSG--VDLPGG--REIRKGAVDAIR----RYVRERGGHIP---- 412
Query: 608 AVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPT-EGYTCIGIVGIKDPMRPGVK 666
E L A E+ P+ E +G++ +KD ++PG+K
Sbjct: 413 --------------EDLDA---AVDEVSR--LGGTPLVVVENGRILGVIYLKDIVKPGIK 453
Query: 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK 726
E A R GI M+TGDN TA AIA E G+ D+
Sbjct: 454 ERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV-----------------DD-------- 488
Query: 727 IQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES 786
+A ++P DK L++ + G +VA+TGDGTNDAPAL +AD+G+AM +GT+ AKE+
Sbjct: 489 --FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEA 544
Query: 787 ADVIILDDNFSTIVTVAKWGRSVYI 811
A+++ LD N + ++ V + G+ + I
Sbjct: 545 ANMVDLDSNPTKLIEVVEIGKQLLI 569
|
Length = 681 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 1e-27
Identities = 96/392 (24%), Positives = 156/392 (39%), Gaps = 82/392 (20%)
Query: 125 AEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCAL 184
AE + TSI +G+ T + +R KE G N+ + + + M+L +
Sbjct: 16 AEFIGTSIPEGL-THDEAQHRLKE-VGENRLEADSGIDAKAMLLHQVCNAMCMVL----I 69
Query: 185 VSLVVGIATEGWPKGAHDGLGIVMSILLV-VFVTATSDYKQSLQFKDLDREKKKITVQVA 243
++ + A W +G G++ +I+ + + + +YK L + V
Sbjct: 70 IAAAISFAMHDWIEG-----GVISAIIALNILIGFIQEYKAEKTMDSL-KNLASPMAHVI 123
Query: 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNP 303
RNG I +DL+PGDI L GD +PAD + + +E+ LTGES PV +A
Sbjct: 124 RNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHAT 183
Query: 304 F--------------LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGG-------DD 342
F S + V G K + + ++ G + A L G D
Sbjct: 184 FGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKD 243
Query: 343 E----------------------------TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQ 374
+ TPL KL+ +A I+ I + FA++ VM
Sbjct: 244 DPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAII---VMAA 300
Query: 375 GLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMND 434
F D + + +AI + I + +PE L +++++A M
Sbjct: 301 HKF---------------DVDKEVAIYAICLAISI--IPESLIAVLSITMAMGAANMSKR 343
Query: 435 KALVRHLAACETMGSATSICSDKTGTLTTNHM 466
+VR L A E +G+ ICSDKTGT+T M
Sbjct: 344 NVIVRKLDALEALGAVNDICSDKTGTITQGKM 375
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|216063 pfam00689, Cation_ATPase_C, Cation transporting ATPase, C-terminus | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 4e-27
Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 842 PLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQF 901
PLT +Q+LW+N++ D L ALAL EPP DLMKR P K S + R IL Q L
Sbjct: 3 PLTPIQILWINLVTDGLPALALGFEPPEPDLMKRPPRKPKEPLFSRKLLRRILLQGLLIA 62
Query: 902 LIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQL 939
++ + G + T+ FNT V QL
Sbjct: 63 IVTLLVFF---LGLLGFGISESGLAQTMAFNTLVLSQL 97
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices. Length = 175 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 2e-26
Identities = 139/621 (22%), Positives = 224/621 (36%), Gaps = 167/621 (26%)
Query: 431 MMNDK----ALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI------------- 473
M ++K A VR E +G I SDKTGTLT N M K I
Sbjct: 336 MYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIK 395
Query: 474 ------------CEEIKEVDNSKGTPAF--------GSSIPASASKLLLQS--------- 504
E V++ T + A +
Sbjct: 396 DGIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVP 455
Query: 505 IFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDF--------------QAERQAS 550
FN+ G E + + +P E A+++ +G F E +
Sbjct: 456 EFNDDGPEEITYQAA------SPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEY 509
Query: 551 KIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVN 610
+I+ V FNS +K+M V++ P+G ++ CKGA +I K L+S G V NE
Sbjct: 510 EILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIF----KRLSSGGNQV--NEETKE 563
Query: 611 HLNETIEKFASEALRTLCLACMEIG-NEF---------------------SADAPIPTEG 648
HL E +ASE LRTLC+A E+ E+ A +
Sbjct: 564 HL----ENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKD 619
Query: 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG---- 704
+G I+D ++ GV E++ + R AGI + ++TGD + TA I C +L+ N
Sbjct: 620 LILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIV 679
Query: 705 IAIEGPEFREKSDEELSK------------------------------LIPKIQVM---- 730
I + + + + L +++
Sbjct: 680 ITSDSLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQL 739
Query: 731 ---------ARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 781
R SP K +V+ ++ + G+ GDG ND + EAD+G+ GI+G E
Sbjct: 740 ALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGV--GISGKE 797
Query: 782 --VAKESADVIILDDNFSTIVTVAKW-GRSVYINIQKFVQFQLTVNVVALIVNF---SSA 835
A ++D I F + + GR Y I K + + N++ I+ F
Sbjct: 798 GMQAVMASDFAI--GQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYN 855
Query: 836 CLTGNAPLTAVQLLWVNMIMDTLGALALAT--EPPNGDLMKRSP----VGRKGNFISNVM 889
+G ++ N+ L ++L + + L R P G+KG S
Sbjct: 856 GFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFS--- 912
Query: 890 WRNILG---QSLYQFLIIWYL 907
+ G +YQ L+I++
Sbjct: 913 TKTFWGWMLDGIYQSLVIFFF 933
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 7e-26
Identities = 62/177 (35%), Positives = 94/177 (53%), Gaps = 29/177 (16%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
G++ + D ++P KE + + GI M+TGDN TAKA+A+E GI
Sbjct: 406 AGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIEN---------- 455
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
V A P DK L+K L+ G+VVA+ GDG NDAPAL +AD+
Sbjct: 456 -----------------VRAEVLPDDKAALIKKLQ-EKGKVVAMVGDGINDAPALAQADV 497
Query: 772 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVAL 828
G+A+G AGT+VA E+ADV++L ++ + + T R I++ + + NV+A+
Sbjct: 498 GIAIG-AGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAI 553
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 2e-24
Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 34/199 (17%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGIT-VRMVTGDNINTAKAIARECGILTDNGIAIEGP 710
+G + + D RP E++A ++ GI V M+TGD A+ +ARE GI
Sbjct: 354 LGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID---------- 403
Query: 711 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770
+V A P DK +VK LR VA+ GDG NDAPAL AD
Sbjct: 404 -----------------EVHAELLPEDKLEIVKELREK-YGPVAMVGDGINDAPALAAAD 445
Query: 771 IGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIV 830
+G+AMG +G++VA E+ADV++L+D+ S + + R +++ V L + ++ +++
Sbjct: 446 VGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILL 505
Query: 831 NFSSACLTGNAPLTAVQLL 849
L G PL L
Sbjct: 506 A-----LFGVLPLWLAVLG 519
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 5e-24
Identities = 75/306 (24%), Positives = 127/306 (41%), Gaps = 43/306 (14%)
Query: 174 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTA-----------TSDY 222
TL+ LA + + + +P + + +L+
Sbjct: 150 DTLVALA--TIGAYAYSLYATLFP------VYFEEAAMLIFLFLLGRYLEARAKGRARRA 201
Query: 223 KQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSV 282
++L LD K TV V +G ++ + ++ GDIV + G+++P DG+ VSG S
Sbjct: 202 IRAL----LDLAPKTATV-VRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS- 255
Query: 283 LINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDD 342
++ES LTGES PV + +GT +GS + VT VG T +++ + E
Sbjct: 256 SVDESMLTGESLPVEKKP-GDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSS 314
Query: 343 ETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFA 402
+ P+Q + VA+ + L A +TFA+ W G E
Sbjct: 315 KAPIQRLADRVASYFVPVVLVIAALTFAL---------------WPLFGGGDWE--TALY 357
Query: 403 IAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLT 462
A+ ++V+A P L LA ++ + + L++ A E + ++ DKTGTLT
Sbjct: 358 RALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLT 417
Query: 463 TNHMTV 468
V
Sbjct: 418 EGKPEV 423
|
Length = 713 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 90.4 bits (225), Expect = 7e-22
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 505 IFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ 564
N E N EI+G PTE+A+L F LG D + R V PFNS +K+
Sbjct: 1 ALCNDAKFGENEEKNGGEIIGDPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKR 60
Query: 565 MGVVIELP-EGGFRVHCKGASEIILAACDKF 594
M V +L + G+R+ KGA E IL C
Sbjct: 61 MSTVHKLEDDDGYRLFVKGAPERILERCSTI 91
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 99.1 bits (248), Expect = 3e-21
Identities = 59/144 (40%), Positives = 84/144 (58%), Gaps = 31/144 (21%)
Query: 653 GIVGIKDPMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
G++ +KD ++PG+KE A R GI TV M+TGDN TA AIA E G+
Sbjct: 438 GVIYLKDIVKPGIKERFAELRKMGIKTV-MITGDNPLTAAAIAAEAGV------------ 484
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
D+ L A ++P DK L++ + G +VA+TGDGTNDAPAL +AD+
Sbjct: 485 -----DDFL----------AEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADV 528
Query: 772 GLAMGIAGTEVAKESADVIILDDN 795
G+AM +GT+ AKE+ +++ LD N
Sbjct: 529 GVAMN-SGTQAAKEAGNMVDLDSN 551
|
Length = 679 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 97.4 bits (243), Expect = 7e-21
Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 40/298 (13%)
Query: 175 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATS--DYKQSLQFKDLD 232
LM LA AL ++ +G EG ++LL++F + +Y + L
Sbjct: 3 LLMALA--ALGAVAIGEYLEG-------------ALLLLLFSIGETLEEYASGRARRALK 47
Query: 233 REKKKI--TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLT 290
+ T +V R G ++++ +L GD+V + G++VP DG+ +SG S ++ES+LT
Sbjct: 48 ALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTST-VDESALT 106
Query: 291 GESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKL 350
GES PV + + +G +G ++VT + + K++ + E + Q +
Sbjct: 107 GESVPVEKAPGDE-VFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFI 165
Query: 351 NGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVV 410
+ A + L A+ + V GL R W + A+ ++VV
Sbjct: 166 DRFARYYTPVVLAIALAIWLVP--GLLKR-------WPFW----------VYRALVLLVV 206
Query: 411 AVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTV 468
A P L ++ + A+ L++ AA E + ++ DKTGTLTT V
Sbjct: 207 ASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKV 264
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|204949 pfam12515, CaATP_NAI, Ca2+-ATPase N terminal autoinhibitory domain | Back alignment and domain information |
|---|
Score = 84.7 bits (210), Expect = 3e-20
Identities = 30/48 (62%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEA 51
YL++ F D+ AKN+SEEAL+RWR+ G VKN +RRFR+TA+L+KR EA
Sbjct: 1 YLDDPF-DIPAKNSSEEALRRWRQAVGLVKNARRRFRYTADLAKRCEA 47
|
This domain family is found in eukaryotes, and is approximately 50 amino acids in length. The family is found in association with pfam00689, pfam00122, pfam00702, pfam00690. There is a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important. This family is the N terminal autoinhibitory domain of an endosomal Ca2+-ATPase. Length = 47 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 86.2 bits (214), Expect = 3e-17
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 20/227 (8%)
Query: 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF 304
+G ++ + L PGDIV + G+++P DG + G S ++ES +TGES PV +P
Sbjct: 99 DGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGESE-VDESLVTGESLPVPKKVGDP- 156
Query: 305 LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFF 364
+++GT GS + T G T +++ + + + P+Q + VA + +
Sbjct: 157 VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAI 216
Query: 365 AVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSL 424
A++TF + W G D + LE AVT++++A P L LA +
Sbjct: 217 ALITFVI---------------WLILGADFVFALEV---AVTVLIIACPCALGLATPTVI 258
Query: 425 AFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKA 471
A A + L++ A E + ++ DKTGTLT TV
Sbjct: 259 AVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDV 305
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 83.2 bits (205), Expect = 3e-16
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 32/193 (16%)
Query: 636 NEFSADAPIP---TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKA 692
S P E +G++ +KD ++ G+ E R GI M TGDN TA
Sbjct: 414 KGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAAT 473
Query: 693 IARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEV 752
IA+E G+ + +A P DK +++ + G +
Sbjct: 474 IAKEAGV---------------------------DRFVAECKPEDKINVIREEQAK-GHI 505
Query: 753 VAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYIN 812
VA+TGDGTNDAPAL EA++GLAM +GT AKE+A++I LD N + ++ V G+ + +
Sbjct: 506 VAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMT 564
Query: 813 IQKFVQFQLTVNV 825
F + ++
Sbjct: 565 RGSLTTFSIANDI 577
|
Length = 673 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 83.1 bits (206), Expect = 4e-16
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 43/219 (19%)
Query: 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA 706
+G++ ++D +R +++++ ++ GI M+TGDN A AIA E GI
Sbjct: 555 RNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI------- 607
Query: 707 IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766
+FR A P DK V L +A+ GDG NDAPA+
Sbjct: 608 ----DFR-----------------AGLLPEDKVKAVTELNQH--APLAMVGDGINDAPAM 644
Query: 767 HEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVV 826
A IG+AMG +GT+VA E+AD + + + + + R+ + NI++ + L + +
Sbjct: 645 KAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAI 703
Query: 827 ALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALAT 865
L+ + +TG LW+ ++ D+ GA AL T
Sbjct: 704 FLVT--TLLGITG---------LWLAVLADS-GATALVT 730
|
Length = 741 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 3e-14
Identities = 48/131 (36%), Positives = 67/131 (51%), Gaps = 29/131 (22%)
Query: 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKS 716
I+DP+R ++ AG + M+TGDN TA AIA+E GI
Sbjct: 647 IRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGI----------------- 689
Query: 717 DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776
+V+A P K +K L++ G VA+ GDG NDAPAL +AD+G+AMG
Sbjct: 690 ----------DEVIAGVLPDGKAEAIKRLQSQ-GRQVAMVGDGINDAPALAQADVGIAMG 738
Query: 777 IAGTEVAKESA 787
G++VA E+A
Sbjct: 739 -GGSDVAIETA 748
|
Length = 834 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 62.2 bits (152), Expect = 4e-12
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLM 177
VE + +L T + G++ +E R E YG N+ E + W D ++
Sbjct: 3 TLSVEEVLARLGTDLEKGLTEAE--AEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVI 60
Query: 178 ILAVCALVS 186
IL + A+VS
Sbjct: 61 ILLIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 68.8 bits (168), Expect = 1e-11
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 31/184 (16%)
Query: 542 DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEV 601
D ERQ ++ + F+S +K+M V++ P+ +V KGA + + D+ LN N V
Sbjct: 595 DIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMN--V 652
Query: 602 VPLNEAAVNHLNETIEKFASEALRTLCLACMEIGN----------EFSADAPIPTEGY-- 649
+ EA HL+ ++S LRTL + E+ + E ++ A I
Sbjct: 653 IRATEA---HLH----TYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLR 705
Query: 650 ----------TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGI 699
T +G I+D ++ GV E++ R+AGI V ++TGD TA +I +
Sbjct: 706 KVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKL 765
Query: 700 LTDN 703
LT+
Sbjct: 766 LTNK 769
|
Length = 1178 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 58.8 bits (142), Expect = 9e-10
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 17/119 (14%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
+G++ + DP+ PG +E++ + AGI + ++TGDN TA AIAR G+ A
Sbjct: 86 LGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDALVSADLYGL 145
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770
+ K PKI +A ++ L EV+ V GDG ND PA A
Sbjct: 146 VG------VGKPDPKIFELA----------LEELGVKPEEVLMV-GDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 2e-08
Identities = 117/486 (24%), Positives = 186/486 (38%), Gaps = 79/486 (16%)
Query: 239 TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNV 298
T +V + + + + D+ PG ++ L GD+VP DG G ++E+ LTGE P
Sbjct: 324 TARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG-EAWLDEAMLTGEPIP-QQ 381
Query: 299 NALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358
+ +GT VQ+GS + VG T +++ + + Q + +
Sbjct: 382 KGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQA-------QSSKPEIGQLAD 434
Query: 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418
KI F V + L W + G A +I+ IA T++++A P L L
Sbjct: 435 KISAVFVPVVVVI--------ALVSAAIWYFFG-PAPQIVYTLVIATTVLIIACPCALGL 485
Query: 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478
A +S+ + + LVR A + + ++ DKTGTLT V+ +
Sbjct: 486 ATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGVD 545
Query: 479 EVDNSKGTPAF--GSSIP---ASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAIL 533
E + A GSS P A K ++ G + G G E G
Sbjct: 546 EAQALRLAAALEQGSSHPLARAILDKAGDMTLPQVNGFRTLRGLGVSGEAEGHA------ 599
Query: 534 EFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDK 593
LLLG Q +E + + +GA+ ++LA
Sbjct: 600 ---LLLGNQALLNEQQVDTKALEAEITAQAS----------------QGATPVLLAV--- 637
Query: 594 FLNSNGEVV-------PLNEAAVNHLNETIEKFASEALRTLCLACMEIG-NEFSADAPIP 645
+G+ PL +V L ++ R + M G N +A+A I
Sbjct: 638 ----DGKAAALLAIRDPLRSDSVAAL----QRLHKAGYRLV----MLTGDNPTTANA-IA 684
Query: 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR-ECGILTDNG 704
E I G+ + G E++ +S G V MV GD IN A A+A+ + GI G
Sbjct: 685 KEAGIDEVIAGV---LPDGKAEAIKRLQSQGRQVAMV-GDGINDAPALAQADVGIAMGGG 740
Query: 705 --IAIE 708
+AIE
Sbjct: 741 SDVAIE 746
|
Length = 834 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 56.6 bits (136), Expect = 5e-08
Identities = 58/260 (22%), Positives = 119/260 (45%), Gaps = 24/260 (9%)
Query: 206 IVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQ-VARNGFRRKISIYDLLPGDIVHL 264
++++++ F A ++ + Q L + + ++ + + ++G I DL G IV +
Sbjct: 72 LLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRV 131
Query: 265 CMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF--LLSGTKVQNGSCKMLVTT 322
G+Q+P DG + G + ++ES++TGES PV + F ++ GT V + ++ +T+
Sbjct: 132 ATGEQIPNDGKVIKGLAT-VDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITS 190
Query: 323 VGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQ 382
+ K++ + +TP ++ L T++ + + F VV + F
Sbjct: 191 EPGHSFLDKMIGLVEGATRKKTPNEIAL---FTLLMTLTIIFLVVILTMYPLAKF----- 242
Query: 383 EGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLA 442
++ L I A+AV ++ + GL A+ ++ M ++ L +
Sbjct: 243 --LNFN------LSIAMLIALAVCLIPTTI-GGLLSAIGIA---GMDRVTQFNILAKSGR 290
Query: 443 ACETMGSATSICSDKTGTLT 462
+ ET G + DKTGT+T
Sbjct: 291 SVETCGDVNVLILDKTGTIT 310
|
Length = 673 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 3e-07
Identities = 25/53 (47%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPV 296
R+G R +++I DL PGD++ + G ++PADG +S F+ +ES+LTGES PV
Sbjct: 249 RDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFASF-DESALTGESIPV 300
|
Length = 741 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 8e-07
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
+E + E+L T + G+S+ E RR E YG N+ + H+ + IL
Sbjct: 9 LEEVLERLQTDLEKGLSSEE--AARRLERYGPNELPPPKKTSPLLRFLRQFHNPLIYILL 66
Query: 181 VCALVSLV 188
A++S +
Sbjct: 67 AAAVLSAL 74
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 4e-05
Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 2/114 (1%)
Query: 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSK 722
PGVKE++ + GI + + T + + E G+ I +E
Sbjct: 27 PGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLF 86
Query: 723 LIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL-HEADIGLAM 775
L + + +P +K L EV+ V GD ND +G+A+
Sbjct: 87 LGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMV-GDSLNDIEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 4e-05
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 718 EELSKLIPKIQVMARSSP---------MDK----HTLVKHLRTTLGEVVAVTGDGTNDAP 764
+EL +L + + S P + K L KHL L EV+A GDG ND
Sbjct: 158 KELKELFGSLITITSSGPGYLEIMPKGVSKGTALKALAKHLGIDLEEVIAF-GDGENDIE 216
Query: 765 ALHEADIGLAMGIAGTEVAKESADVIILDDN 795
L A +G+AMG A + K +AD + +N
Sbjct: 217 MLELAGLGVAMGNA-SPEVKAAADYVTGSNN 246
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 46.3 bits (111), Expect = 8e-05
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGF-SVLINESSLTGESEPV 296
G ++ +L GDIV + G+ +PADG + G SV +ES++TGES PV
Sbjct: 112 PGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVASV--DESAITGESAPV 162
|
Length = 679 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 8e-05
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 741 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
L + L +L +V+A GDG ND L A G+AMG A E K AD + +N
Sbjct: 196 LAEALGISLEDVIAF-GDGMNDIEMLEAAGYGVAMGNA-DEELKALADYVTDSNN 248
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 2e-04
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 713 REKSDEELSKL--IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770
R+ S +L++ IP +V A + P K +++ L+ E V + G+G ND AL EAD
Sbjct: 55 RKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKR-YEKVVMVGNGANDILALREAD 113
Query: 771 IG-LAMGIAGT-EVAKESADVIILD 793
+G + G E +ADV++ +
Sbjct: 114 LGICTIQQEGVPERLLLTADVVLKE 138
|
Length = 152 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 2e-04
Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718
+ PG +E VA ++AG V +++G + IA GI D +A E E D
Sbjct: 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGI--DYVVANE----LEIDDG 129
Query: 719 ELSKLIPKIQVMARSSPMDKHTLVKHLR---TTLGEVVAVTGDGTNDAPALHEADIGLA 774
+L+ + L + L E VA GD ND P L A + +A
Sbjct: 130 KLTGRVVGPICDGEGK---AKALRELAAELGIPLEETVAY-GDSANDLPMLEAAGLPIA 184
|
Length = 212 |
| >gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 5e-04
Identities = 24/51 (47%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 741 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVII 791
L K L L EV+A GD TND L A +G+AMG A E KE AD +
Sbjct: 197 LAKLLGIKLEEVIAF-GDSTNDIEMLEVAGLGVAMGNA-DEELKELADYVT 245
|
Length = 264 |
| >gnl|CDD|226555 COG4069, COG4069, Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.002
Identities = 41/197 (20%), Positives = 66/197 (33%), Gaps = 36/197 (18%)
Query: 598 NGEVVPLNEAAVNHLNETIEKFASEALRTL--CLACMEIGNEFSADAPIPTEGYTCIGIV 655
+GE++P N AA H + E + R EI N+ I
Sbjct: 114 DGELIPWNRAARPHAEKLSELLGLKISRPPLPVRNNGEICNQ--------IGKRVVRRIS 165
Query: 656 GIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI--AIEGPEFR 713
GV I +V G I KA + E ++ +NG IEG +
Sbjct: 166 --------GVFPGENI---------LVNG--IVVGKATSSEVELVAENGFLTDIEGGRIK 206
Query: 714 EKSDEELSKLIP-----KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHE 768
E E+L ++ K + RS K + +V+ + +
Sbjct: 207 EHGIEKLHRVDLARAVVKTGALRRSPDEPKKVKSRKENAHAVKVILIDHAAERSYELIEG 266
Query: 769 ADIGLAMGIAGTEVAKE 785
A + + +G TEVA +
Sbjct: 267 AGLVVTVGDDTTEVAGD 283
|
Length = 367 |
| >gnl|CDD|213628 TIGR01487, Pglycolate_arch, phosphoglycolate phosphatase, TA0175-type | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.003
Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 27/118 (22%)
Query: 677 ITVRMVTGDNINTAKAIARECGI-LTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735
V M G +++ + I +E G+ L +G AI
Sbjct: 108 SLVIMREGKDVDEVREIIKERGLNLVASGFAI----------------------HIMKKG 145
Query: 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 790
+DK V+ L+ LG E VA GD ND +A+ A + KE AD +
Sbjct: 146 VDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVANA-DDQLKEIADYV 202
|
This group of Archaeal sequences, now known to be phosphoglycolate phosphatases, is most closely related to the sucrose-phosphate phosphatases from plants and cyanobacteria (TIGR01485). Together, these two models comprise a subfamily model (TIGR01482). TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Length = 215 |
| >gnl|CDD|221729 pfam12710, HAD, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 38.0 bits (88), Expect = 0.004
Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 14/88 (15%)
Query: 681 MVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP--KIQVMARSSPMDK 738
+V+G + +A+ GI N + E E KL K + R +
Sbjct: 46 IVSGSPEPLVRPVAKALGIDDVNVVGTE-LENVLVDGRLTGKLDGEGKAAALKRLA---- 100
Query: 739 HTLVKHLRTTLGEVVAVTGDGTNDAPAL 766
+ VVAV GD +D PAL
Sbjct: 101 ------QKIGRYPVVAV-GDSISDLPAL 121
|
Length = 122 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 991 | |||
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.89 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.7 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.64 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.54 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.53 | |
| PF12515 | 47 | CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory d | 99.46 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.14 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.09 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.04 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.04 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.01 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.0 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.0 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.98 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.98 | |
| PLN02887 | 580 | hydrolase family protein | 98.96 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 98.93 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.93 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.93 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.85 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.84 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.84 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.78 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.76 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.69 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.69 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.66 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.61 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.58 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.52 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.49 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.42 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.37 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.36 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.24 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.22 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.2 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.09 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.05 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.05 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.04 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.03 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.02 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.01 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.01 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.97 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.95 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.89 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.87 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.86 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.81 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.71 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.64 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.6 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.59 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.5 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.43 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.43 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.36 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.33 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.31 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.28 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.18 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.16 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.16 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.15 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.12 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.1 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.09 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.08 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.07 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.06 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.87 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.87 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.82 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.77 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.67 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.55 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.53 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.5 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 96.43 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.43 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.43 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.38 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.34 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.29 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.25 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.22 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.15 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 96.11 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.07 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.07 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 96.01 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.94 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.88 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.82 | |
| PLN02940 | 382 | riboflavin kinase | 95.79 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.73 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 95.7 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 95.38 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 95.36 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.32 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 95.2 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 95.18 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 95.12 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 95.1 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 95.06 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 94.96 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.78 | |
| PLN02811 | 220 | hydrolase | 94.57 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.47 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 94.41 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 94.08 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 93.86 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 93.74 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 93.7 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 93.56 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 93.27 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 93.0 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 92.89 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 92.86 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 92.83 | |
| PLN03017 | 366 | trehalose-phosphatase | 92.82 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 92.78 | |
| PLN02423 | 245 | phosphomannomutase | 91.75 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 91.63 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 91.55 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 91.45 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 89.69 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 89.35 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 89.2 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 88.97 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 88.95 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 88.44 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 87.83 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 87.77 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 85.32 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 85.2 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 84.27 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 83.26 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 82.86 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 81.65 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 81.52 | |
| PLN02151 | 354 | trehalose-phosphatase | 80.84 |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-211 Score=1769.61 Aligned_cols=950 Identities=59% Similarity=0.903 Sum_probs=890.2
Q ss_pred cccccCCCCCCCCCcHHHHHHHHHhhcccccccccchhhhccchhhhHHHHHhhhhhhhHHHHhhhhhhhhhhcccCCCC
Q 001960 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSS 83 (991)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~f~~~~~l~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 83 (991)
++.++|. .+.+|++.++++|||.|. .+++++|||||..++++..+....|+ +.|+...+.+|+..|.++. +.+
T Consensus 2 ~~~~~~~-~~~~n~~~~~~~~~~~a~-~~~~~~~~~~~~~~l~~~~~~~~~r~----~~r~~~~~~~a~~~~~~~~-~~~ 74 (1034)
T KOG0204|consen 2 LLDKDFV-VSMKNSSIEALQRWRLAY-IVLEASRRFRFGASLKKLRELMEPRR----KIRSAVLVSKAAALFIDAG-SRT 74 (1034)
T ss_pred Ccccccc-cccccchhhhhhhhhhhh-hhcccchhhccccCHHHHHHHHHHHh----hhhhhhcccchhhhhhccc-ccc
Confidence 3456676 788899999999999887 99999999999999998887655555 8899999999999998873 222
Q ss_pred ccccccccccCCcccChhhhhhhhccCChHHHHhhCCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccH
Q 001960 84 EYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGF 163 (991)
Q Consensus 84 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f 163 (991)
++.+ +++++++.+++++++.+.|.++||++|+|+.|+||+..||+.+++++.+|++.||+|.+|++++++|
T Consensus 75 e~~~---------~i~~e~l~~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~F 145 (1034)
T KOG0204|consen 75 EYTL---------GIGAEELVKIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGF 145 (1034)
T ss_pred cccc---------ccCHHHHHHHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccH
Confidence 2222 7888999999999999999999999999999999999999998888999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEE
Q 001960 164 WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVA 243 (991)
Q Consensus 164 ~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~ 243 (991)
|+++||+++|.++++|++||++|+++++++++++++|||+++|++++++|++++|++||+|++||++|++++.+.+++|+
T Consensus 146 l~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~Vi 225 (1034)
T KOG0204|consen 146 LRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVI 225 (1034)
T ss_pred HHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccC-CCCeEEeccEEecCeEEEEEEE
Q 001960 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA-LNPFLLSGTKVQNGSCKMLVTT 322 (991)
Q Consensus 244 R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~-~~~~l~sGt~v~~g~~~~~V~~ 322 (991)
|||++++|++.|||||||+.|+.||+|||||++++|++|.||||+|||||++++|+. .+|||+|||++.+|+|+|+||+
T Consensus 226 R~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTa 305 (1034)
T KOG0204|consen 226 RGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTA 305 (1034)
T ss_pred ECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEE
Confidence 999999999999999999999999999999999999999999999999999999986 8999999999999999999999
Q ss_pred EeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCc--cccCCcChHHHHHH
Q 001960 323 VGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTH--WTWSGDDALEILEF 400 (991)
Q Consensus 323 ~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 400 (991)
+|+||+||++|..+.....++||||.+++++|..|+++++.+|++++++++++|+......+.. +.|.......++++
T Consensus 306 VGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~ 385 (1034)
T KOG0204|consen 306 VGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKF 385 (1034)
T ss_pred eeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHH
Confidence 9999999999999999998999999999999999999999999999999999999877654443 55665557789999
Q ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeee
Q 001960 401 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480 (991)
Q Consensus 401 ~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~ 480 (991)
|.++++++|+|+|||||||||+++|++++||++|++|||+++|||+||++++||+|||||||+|+|+|++.|++++.+..
T Consensus 386 f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~ 465 (1034)
T KOG0204|consen 386 FIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKV 465 (1034)
T ss_pred hhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887764
Q ss_pred cCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCC--ceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecC
Q 001960 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN--KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPF 558 (991)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~--~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF 558 (991)
+... ...+++...+++.++++.|++..+..++.+ ++++.|||||+||+.|+..+|+++++.|++.++++++||
T Consensus 466 ~~~~-----~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~F 540 (1034)
T KOG0204|consen 466 NSPK-----SSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPF 540 (1034)
T ss_pred cCcc-----cccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEecc
Confidence 3321 156889999999999999999999987765 889999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEEeCCCe-EEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCC
Q 001960 559 NSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (991)
Q Consensus 559 ~s~~k~msviv~~~~~~-~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~ 637 (991)
||.||+|+++++.++++ | +|||||+|+|+++|+++++++|+..+++++.++.+++.|+.||++||||+|+|||++...
T Consensus 541 NS~kK~~gvvi~~~~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~ 619 (1034)
T KOG0204|consen 541 NSVKKRMGVVIKLPDGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAG 619 (1034)
T ss_pred CcccceeeEEEEcCCCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccC
Confidence 99999999999988877 6 999999999999999999999999999999999999999999999999999999996543
Q ss_pred ----CC-CCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeeeCc
Q 001960 638 ----FS-ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGP 710 (991)
Q Consensus 638 ----~~-~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~--~vi~g~ 710 (991)
++ ++++.++.+++++|++||+||+||||+++|+.|++|||+|.|+||||..||++||.+|||.++++ .+++|+
T Consensus 620 ~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~ 699 (1034)
T KOG0204|consen 620 PDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGK 699 (1034)
T ss_pred CCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecch
Confidence 22 22357789999999999999999999999999999999999999999999999999999999887 999999
Q ss_pred ccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEE
Q 001960 711 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 790 (991)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~v 790 (991)
+|++++++++++++|+++|+||++|.||+.+|+.|+++ |++|+++|||+||+|||++||||+|||++|||+|||+||||
T Consensus 700 eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~-g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDII 778 (1034)
T KOG0204|consen 700 EFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQ-GEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDII 778 (1034)
T ss_pred hhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhc-CcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeE
Confidence 99999999999999999999999999999999999988 99999999999999999999999999999999999999999
Q ss_pred eccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHhccCCCCc
Q 001960 791 ILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNG 870 (991)
Q Consensus 791 l~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~ 870 (991)
|+||||++|+++++|||++|+||+||+||||++|+++++++|++++..+.+||+++||||+|+|||+|++||||||||++
T Consensus 779 i~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~ 858 (1034)
T KOG0204|consen 779 ILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTD 858 (1034)
T ss_pred EEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCC--cccchhHHHHHHHHHHHHHHHHhhccc
Q 001960 871 DLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPD--PDLILNTLIFNTFVFCQLQRDGKDKRL 948 (991)
Q Consensus 871 ~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~t~~f~~~v~~q~~n~~~~r~~ 948 (991)
++|+|+|++|++|||++.||++|++|++||++++|.++|.|..+|+.+++. .+..++|++||+||+||+||+||+|++
T Consensus 859 ~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki 938 (1034)
T KOG0204|consen 859 ELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKI 938 (1034)
T ss_pred HHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcch
Confidence 999999999999999999999999999999999999999999999877764 367889999999999999999999999
Q ss_pred cccchhhhhhcccccccccccCccccceeeeecCccceeeec
Q 001960 949 QGYTEELCLCSCAHLHRSFSNNNHRAPGYICKYNSSQFATVV 990 (991)
Q Consensus 949 ~~~~~~l~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 990 (991)
++. ..|...++|+.|+.++--...+||+
T Consensus 939 ~~~--------------NvFkgi~~N~~F~~ii~~T~v~Qvi 966 (1034)
T KOG0204|consen 939 DER--------------NVFKGIFRNRLFCVIITITVVSQVI 966 (1034)
T ss_pred hHH--------------hHHHHHhcCceEEEEeeeeeehhhh
Confidence 854 4567777888888887776666653
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-148 Score=1262.20 Aligned_cols=836 Identities=33% Similarity=0.502 Sum_probs=712.5
Q ss_pred CCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCC
Q 001960 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (991)
Q Consensus 119 ~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~ 198 (991)
..+++.+..|.|+++.||+.++ +.+|++.||.|+++...+.|+|+.+++||.++...+|+++|++|+++..
T Consensus 7 ~~v~e~~~~f~t~~~~GLt~~e--v~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~------- 77 (972)
T KOG0202|consen 7 KSVSEVLAEFGTDLEEGLTSDE--VTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLAD------- 77 (972)
T ss_pred CcHHHHHHHhCcCcccCCCHHH--HHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHh-------
Confidence 4588999999999999999987 9999999999999999999999999999999999999999999999874
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEe
Q 001960 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (991)
Q Consensus 199 ~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~ 278 (991)
|-|+++|.+++++++.+..+++|+.+++.+.|.+. .+..++|+|+|+.+.++++||||||||.|+.||+||||.++++
T Consensus 78 -~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l-~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 78 -FDEPFVITLIIVINVTVGFVQEYNAEKALEALKEL-VPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhc-CCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 45788899999999999999999999999999874 5569999999999999999999999999999999999999999
Q ss_pred ecceEEecccCCCCCcceecc-------------CCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCCh
Q 001960 279 GFSVLINESSLTGESEPVNVN-------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETP 345 (991)
Q Consensus 279 g~~l~VDeS~LTGES~pv~k~-------------~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~ 345 (991)
..++.||||+|||||.|+.|. ...+++|+||.|..|.++++|++||.+|++|++...+.+.++++||
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 999999999999999999993 2356899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Q 001960 346 LQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLA 425 (991)
Q Consensus 346 lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~ 425 (991)
||+++|.+...+..+..++++.+++.- ++++.. -.++ +.+...+..+|.+++++.|+++|||||..+|++++
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~n-ig~f~~-p~~~------g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLA 307 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLN-IGHFLD-PVHG------GSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLA 307 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhh-hhhhcc-cccc------ccchhchhhhhhHHHHHHHHhccCCCcchhhhhHH
Confidence 999999999998866554444433321 122210 0111 11223577899999999999999999999999999
Q ss_pred HHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeec------CCCCCC----------CC
Q 001960 426 FAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVD------NSKGTP----------AF 489 (991)
Q Consensus 426 ~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~------~~~~~~----------~~ 489 (991)
.+.+||+|++++||++.++|+||.+++||+|||||||+|+|++.++|+.+...... .....+ ..
T Consensus 308 LG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~ 387 (972)
T KOG0202|consen 308 LGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEK 387 (972)
T ss_pred HhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCcccc
Confidence 99999999999999999999999999999999999999999999999876543211 000000 01
Q ss_pred CCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHH---------------HhhhcceEE
Q 001960 490 GSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQA---------------ERQASKIVK 554 (991)
Q Consensus 490 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~---------------~~~~~~il~ 554 (991)
......+.+.-+.+..+.|+.+.+..++.+.++..|.|+|.||..++.+.|+.-.. ..+.++.+.
T Consensus 388 ~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~ 467 (972)
T KOG0202|consen 388 DKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIA 467 (972)
T ss_pred ccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhhee
Confidence 11223344445556666777777776654566669999999999999998875432 122345668
Q ss_pred EecCCCCCceEEEEEEeCCC--eEEEEEcCchHHHHHhccccccCCC-eeecCCHHHHHHHHHHHHHHHHcccceeeeeE
Q 001960 555 VEPFNSVKKQMGVVIELPEG--GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNETIEKFASEALRTLCLAC 631 (991)
Q Consensus 555 ~~pF~s~~k~msviv~~~~~--~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~ 631 (991)
++||+|+||+|||.+..+.+ ++.+|+|||+|.|+++|+.++..+| ...||++..|+.+.+...+|+++|||||++|+
T Consensus 468 elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~ 547 (972)
T KOG0202|consen 468 ELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALAS 547 (972)
T ss_pred EeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEc
Confidence 99999999999999986544 4899999999999999988887776 55999999999999999999999999999999
Q ss_pred EecCCC--------CCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC
Q 001960 632 MEIGNE--------FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN 703 (991)
Q Consensus 632 ~~l~~~--------~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~ 703 (991)
++.+.. ...++...|.||+|+|++|+.||||++++++|+.|+++||+|+|+|||+..||.+||+++|+...+
T Consensus 548 ~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ 627 (972)
T KOG0202|consen 548 KDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSED 627 (972)
T ss_pred cCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCC
Confidence 977631 122345678999999999999999999999999999999999999999999999999999998776
Q ss_pred c----eeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCC
Q 001960 704 G----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779 (991)
Q Consensus 704 ~----~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g 779 (991)
. .+++|++|+.++++++++...+..+|+|++|.+|.++|+.||++ |++|+|+|||+||+||||.||||||||++|
T Consensus 628 ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~-geivAMTGDGVNDApALK~AdIGIAMG~~G 706 (972)
T KOG0202|consen 628 EDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSR-GEVVAMTGDGVNDAPALKKADIGIAMGISG 706 (972)
T ss_pred ccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhc-CCEEEecCCCccchhhhhhcccceeecCCc
Confidence 6 78999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred cHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHH
Q 001960 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLG 859 (991)
Q Consensus 780 ~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~ 859 (991)
||+||++||+|+.||||++|+.++++||.+|+||++|+.|++..|+.++...++++.+..+.||+|+|+||+|++||.+|
T Consensus 707 TdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~P 786 (972)
T KOG0202|consen 707 TDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPP 786 (972)
T ss_pred cHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHH---HHHhc-ccccccC-------------CCC-
Q 001960 860 ALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWY---LQTRG-KAVFRLD-------------GPD- 921 (991)
Q Consensus 860 ~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---l~~~~-~~~~~~~-------------~~~- 921 (991)
|.+|+.|||++++|+|||+++++++++.+.+..++..++|..+.... ..|.+ ....... +.+
T Consensus 787 A~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c 866 (972)
T KOG0202|consen 787 ATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRC 866 (972)
T ss_pred hhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccch
Confidence 99999999999999999999999999999988888888776543222 22221 0000000 000
Q ss_pred ---cccchhHHHHHHHHHHHHHHHHhhccccccchhhhhhcccccccccccCccccceeeeecCccceee
Q 001960 922 ---PDLILNTLIFNTFVFCQLQRDGKDKRLQGYTEELCLCSCAHLHRSFSNNNHRAPGYICKYNSSQFAT 988 (991)
Q Consensus 922 ---~~~~~~t~~f~~~v~~q~~n~~~~r~~~~~~~~l~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 988 (991)
......||.|..||+...||.+|||+...+ .|.+.+|.|.||..+...|..+.
T Consensus 867 ~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~s--------------lf~~~~~~N~~l~~ai~~S~~~~ 922 (972)
T KOG0202|consen 867 AVFEDMCPLTMALTVLVFIEMFNALNCLSENKS--------------LFTMPPWSNRWLLWAIALSFVLH 922 (972)
T ss_pred hhhcccccceEEEeehhHHHHHHHhhcccCCcc--------------eEEecccccHHHHHHHHHHHHhh
Confidence 001235999999999999999999998765 23445555666555555444433
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-141 Score=1333.58 Aligned_cols=848 Identities=51% Similarity=0.813 Sum_probs=745.5
Q ss_pred ccCCcccChhhhhhhhcc-CChHHHHhhCCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHH
Q 001960 92 AASGFQICPDELGSIVEG-HDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEA 170 (991)
Q Consensus 92 ~~~g~~~~~~~~~~~~~~-~~~~~l~~~~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~ 170 (991)
...||.+...++.+..+. ++.+.|..+||++++++.|+++...||+.+++++++|+++||+|+++.++++++|+.++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~ 93 (941)
T TIGR01517 14 FTDGFDVGVSILTDLTDIFKRAPIYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAA 93 (941)
T ss_pred cCCCCCCCHHHHHHhcCchhhHHHHHHhCCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHH
Confidence 457899999999998865 4677888999999999999999999999333349999999999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHHHHhhhc-----ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeC
Q 001960 171 LHDMTLMILAVCALVSLVVGIA-----TEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN 245 (991)
Q Consensus 171 ~~~~~~~illi~ai~s~~~~~~-----~~~~~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~ 245 (991)
|+++++++|++++++++++++. .++..+.|++++.++++++++++++++++|+++++++++++..++.+++|+||
T Consensus 94 f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRd 173 (941)
T TIGR01517 94 LSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRG 173 (941)
T ss_pred HhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 9999999999999999998753 23334689999999999999999999999999999999987666779999999
Q ss_pred CeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccCC-CCeEEeccEEecCeEEEEEEEEe
Q 001960 246 GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVG 324 (991)
Q Consensus 246 G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~~-~~~l~sGt~v~~g~~~~~V~~~G 324 (991)
|++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+.|..+ ++++|+||.|.+|.++++|++||
T Consensus 174 G~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG 253 (941)
T TIGR01517 174 GQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVG 253 (941)
T ss_pred CEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeC
Confidence 99999999999999999999999999999999997799999999999999999754 46899999999999999999999
Q ss_pred ccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHH
Q 001960 325 MRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIA 404 (991)
Q Consensus 325 ~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (991)
.+|++||+++++.+++ +++|+|++++++++++.++++.++++++++++..++......+.. ........+...+..+
T Consensus 254 ~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a 330 (941)
T TIGR01517 254 VNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGR--DTEEDAQTFLDHFIIA 330 (941)
T ss_pred CCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc--ccchhhHHHHHHHHHH
Confidence 9999999999988765 568999999999999999988888888877655433221111000 0000112567788999
Q ss_pred HHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCC
Q 001960 405 VTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSK 484 (991)
Q Consensus 405 i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ 484 (991)
+++++++||||||+++|++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|++++..+..++.++.
T Consensus 331 l~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~- 409 (941)
T TIGR01517 331 VTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDV- 409 (941)
T ss_pred HHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999876654432211
Q ss_pred CCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCce
Q 001960 485 GTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ 564 (991)
Q Consensus 485 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~ 564 (991)
....++...+++..++++|+......++.+..+..|||+|.|+++++.+.|.+....+..+++++.+||+|++|+
T Consensus 410 -----~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ 484 (941)
T TIGR01517 410 -----LRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKF 484 (941)
T ss_pred -----cccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCe
Confidence 111223445556666666665443322233445689999999999999888877777777888999999999999
Q ss_pred EEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCC
Q 001960 565 MGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPI 644 (991)
Q Consensus 565 msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~ 644 (991)
|+++++.+++.+++++|||||.++++|+.+++.+|...++++ .++.+.+.+++++++|+|++++|||+++.+.....+.
T Consensus 485 msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~ 563 (941)
T TIGR01517 485 MSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDY 563 (941)
T ss_pred EEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccc
Confidence 999999877779999999999999999988777888888887 6788999999999999999999999986543322334
Q ss_pred CCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 001960 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (991)
Q Consensus 645 ~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~ 724 (991)
.|++++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|++|||.+++..+++|++++.++++++++.+
T Consensus 564 ~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i 643 (941)
T TIGR01517 564 PNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPIL 643 (941)
T ss_pred cccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHh
Confidence 57899999999999999999999999999999999999999999999999999999877899999999999999999999
Q ss_pred cccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 725 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 725 ~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
+++.||||++|+||.++|+.+|++ |++|+|||||+||+|||++||||||||++|+|+|+++||+++++|+|++|+++++
T Consensus 644 ~~~~Vfar~sPe~K~~iV~~lq~~-g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~ 722 (941)
T TIGR01517 644 PKLRVLARSSPLDKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVK 722 (941)
T ss_pred ccCeEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHH
Confidence 999999999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCC
Q 001960 805 WGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNF 884 (991)
Q Consensus 805 ~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~ 884 (991)
+||++|+||+|+++|++++|+..+++.+++.++.++.|++++|++|+|+++|.+|+++|++|+|++++|++||+++++++
T Consensus 723 ~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~l 802 (941)
T TIGR01517 723 WGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPL 802 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCC-----CcccchhHHHHHHHHHHHHHHHHhhccccc
Q 001960 885 ISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGP-----DPDLILNTLIFNTFVFCQLQRDGKDKRLQG 950 (991)
Q Consensus 885 ~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~t~~f~~~v~~q~~n~~~~r~~~~ 950 (991)
+++.||++|+.++++++++.+++++.+..+++..+. +.....+|++|++|+++|+||.+|+|+...
T Consensus 803 i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~ 873 (941)
T TIGR01517 803 ISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYE 873 (941)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCc
Confidence 999999999999999999888877766656544331 123457899999999999999999998653
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-135 Score=1270.77 Aligned_cols=801 Identities=28% Similarity=0.406 Sum_probs=682.3
Q ss_pred CCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCC
Q 001960 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (991)
Q Consensus 119 ~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~ 198 (991)
..++++++.|+++...||++++ +++|+++||+|+++.++.+++|+.+++||+++++++|+++++++++.+
T Consensus 10 ~~~~~v~~~l~t~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~-------- 79 (1053)
T TIGR01523 10 DIADEAAEFIGTSIPEGLTHDE--AQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH-------- 79 (1053)
T ss_pred CCHHHHHHHhCcCcccCCCHHH--HHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh--------
Confidence 4578899999999989999987 999999999999999999999999999999999999999999999875
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEe
Q 001960 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (991)
Q Consensus 199 ~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~ 278 (991)
.|+|++.|++.+++..+++.+++|+.+++.++|.+. .+.+++|+|||++++|+++||||||||.|++||+|||||+|++
T Consensus 80 ~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l-~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~ 158 (1053)
T TIGR01523 80 DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNL-ASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIE 158 (1053)
T ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEE
Confidence 588999999999999999999999999999999875 4558999999999999999999999999999999999999999
Q ss_pred ecceEEecccCCCCCcceeccCC--------------CCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCC---
Q 001960 279 GFSVLINESSLTGESEPVNVNAL--------------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD--- 341 (991)
Q Consensus 279 g~~l~VDeS~LTGES~pv~k~~~--------------~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~--- 341 (991)
+++|.||||+|||||.|+.|... .+++|+||.|.+|.++++|++||.+|++|+|.+++.+.+.
T Consensus 159 ~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~ 238 (1053)
T TIGR01523 159 TKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQ 238 (1053)
T ss_pred eCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhccc
Confidence 98999999999999999999521 3578999999999999999999999999999998864321
Q ss_pred --------------------------------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccc
Q 001960 342 --------------------------------DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTW 389 (991)
Q Consensus 342 --------------------------------~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~ 389 (991)
.+||+|+++++++.++..++++++++++++....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~-------------- 304 (1053)
T TIGR01523 239 RPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFD-------------- 304 (1053)
T ss_pred cccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------------
Confidence 2499999999999998887777776665532100
Q ss_pred CCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEE
Q 001960 390 SGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVL 469 (991)
Q Consensus 390 ~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~ 469 (991)
.+...+..+++++++++|+|||+.++++++.+++||+++|++||+++++|+||++++||+|||||||+|+|+|+
T Consensus 305 ------~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~ 378 (1053)
T TIGR01523 305 ------VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIAR 378 (1053)
T ss_pred ------hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEE
Confidence 11245667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcC-eeeeecCC--CCCCC------------------------C-------------CCCCChhHHHHHHHHHHhcC
Q 001960 470 KACICE-EIKEVDNS--KGTPA------------------------F-------------GSSIPASASKLLLQSIFNNT 509 (991)
Q Consensus 470 ~~~~~~-~~~~~~~~--~~~~~------------------------~-------------~~~~~~~~~~~l~~~i~~~~ 509 (991)
++|..+ ..+..+.. ...+. . .....++....+.....+|+
T Consensus 379 ~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn 458 (1053)
T TIGR01523 379 QIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALAN 458 (1053)
T ss_pred EEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhcc
Confidence 999764 22221110 00000 0 00001112233455556666
Q ss_pred CCceeec-CCCceeecCChhhHHHHHHHHHcCCChH------HH-------------------hhhcceEEEecCCCCCc
Q 001960 510 GGEVVIG-EGNKTEILGTPTETAILEFGLLLGGDFQ------AE-------------------RQASKIVKVEPFNSVKK 563 (991)
Q Consensus 510 ~~~~~~~-~~~~~~~~g~p~e~All~~a~~~g~~~~------~~-------------------~~~~~il~~~pF~s~~k 563 (991)
.+.+..+ +++.+...|||+|.||+.++.+.|.+.. .. +..+++++.+||+|+||
T Consensus 459 ~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK 538 (1053)
T TIGR01523 459 IATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIK 538 (1053)
T ss_pred CCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCC
Confidence 6665432 2234456899999999999988887421 11 23468999999999999
Q ss_pred eEEEEEEeCCC-eEEEEEcCchHHHHHhccccccCCC-eeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCC--
Q 001960 564 QMGVVIELPEG-GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS-- 639 (991)
Q Consensus 564 ~msviv~~~~~-~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~-- 639 (991)
||+++++.+++ .+++|+|||||.|+++|+.+...+| ...+++++.++.+.+.+++|+++|+||+++|||.++.+..
T Consensus 539 ~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~ 618 (1053)
T TIGR01523 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNND 618 (1053)
T ss_pred eEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccc
Confidence 99999987644 5889999999999999998765555 5678999999999999999999999999999999865311
Q ss_pred -------CCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----------
Q 001960 640 -------ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---------- 702 (991)
Q Consensus 640 -------~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~---------- 702 (991)
...+..|+|++|+|+++++||+||+++++|+.|+++||+|+|+|||++.||.++|+++||..+
T Consensus 619 ~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~ 698 (1053)
T TIGR01523 619 DQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIM 698 (1053)
T ss_pred hhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccc
Confidence 012346889999999999999999999999999999999999999999999999999999754
Q ss_pred CceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHH
Q 001960 703 NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (991)
Q Consensus 703 ~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ 782 (991)
...+++|++++.++++++++...+..||||++|+||.++|+.+|++ |++|+|+|||+||+|||++||||||||++|+|+
T Consensus 699 ~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v 777 (1053)
T TIGR01523 699 DSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV 777 (1053)
T ss_pred cceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhc-CCeeEEeCCCcchHHHHHhCCccEecCCCccHH
Confidence 3479999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---C--CCChhHHHHHHHHHHHhH
Q 001960 783 AKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT---G--NAPLTAVQLLWVNMIMDT 857 (991)
Q Consensus 783 ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~---~--~~pl~~~qll~~nli~d~ 857 (991)
||++||+++++|||++|+++++|||++|+||+|+++|.+++|+..+++.+++.++. | +.||+++|+||+|+++|.
T Consensus 778 ak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~ 857 (1053)
T TIGR01523 778 AKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSC 857 (1053)
T ss_pred HHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888887774 3 379999999999999999
Q ss_pred HHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHH---hcc--cccccC-----CC--Ccccc
Q 001960 858 LGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQT---RGK--AVFRLD-----GP--DPDLI 925 (991)
Q Consensus 858 l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~---~~~--~~~~~~-----~~--~~~~~ 925 (991)
+|+++|++|||++++|+|||+.++++++++.+++.++.+++++++..+..++ ++. ...... +. .....
T Consensus 858 ~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (1053)
T TIGR01523 858 FPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFK 937 (1053)
T ss_pred HHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhh
Confidence 9999999999999999999999999999999999898888888766554332 211 000000 00 01234
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccccc
Q 001960 926 LNTLIFNTFVFCQLQRDGKDKRLQGY 951 (991)
Q Consensus 926 ~~t~~f~~~v~~q~~n~~~~r~~~~~ 951 (991)
.+|+.|.+++++|++|.+|||+.+.+
T Consensus 938 a~t~~f~~l~~~~~~~~~~~r~~~~~ 963 (1053)
T TIGR01523 938 ARSAAFATMTFCALILAVEVKDFDNS 963 (1053)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCchh
Confidence 68999999999999999999986544
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-131 Score=1242.23 Aligned_cols=808 Identities=29% Similarity=0.406 Sum_probs=676.3
Q ss_pred CCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhccc----
Q 001960 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATE---- 194 (991)
Q Consensus 119 ~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~---- 194 (991)
..++++++.|+++...||++++ +++|+++||+|+++.++++++|+.++++|+++++++++++++++++.....+
T Consensus 20 ~~~~~~~~~l~t~~~~GLs~~e--~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~ 97 (997)
T TIGR01106 20 LSLDELERKYGTDLSKGLSAAR--AAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEE 97 (997)
T ss_pred CCHHHHHHHhCcCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCC
Confidence 4688999999999999999987 9999999999999998999999999999999999999999999876533221
Q ss_pred -CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeeccc
Q 001960 195 -GWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPAD 273 (991)
Q Consensus 195 -~~~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaD 273 (991)
.....|++++.+++.+++..+++.+.+++.++..+++.+ ..+.+++|+|||++++|+++||||||+|.|++||+||||
T Consensus 98 ~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~-~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD 176 (997)
T TIGR01106 98 EPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKN-MVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPAD 176 (997)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeee
Confidence 112467887755444444444444444444444455544 345689999999999999999999999999999999999
Q ss_pred EEEEeecceEEecccCCCCCcceeccCCC---------CeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCC
Q 001960 274 GLFVSGFSVLINESSLTGESEPVNVNALN---------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDET 344 (991)
Q Consensus 274 gill~g~~l~VDeS~LTGES~pv~k~~~~---------~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t 344 (991)
|++++|+++.||||+|||||.|+.|..++ +++|+||.|.+|.+.++|++||.+|+.|++.+++.+.+.+++
T Consensus 177 ~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 256 (997)
T TIGR01106 177 LRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKT 256 (997)
T ss_pred EEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCCC
Confidence 99999988999999999999999996543 479999999999999999999999999999999988888889
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Q 001960 345 PLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSL 424 (991)
Q Consensus 345 ~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l 424 (991)
|+|++++++++.+..+++++++++++++... +. .+...+..++++++++||||||+++++++
T Consensus 257 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----------~~~~~~~~~i~v~v~~iP~~L~~~v~i~l 318 (997)
T TIGR01106 257 PIAIEIEHFIHIITGVAVFLGVSFFILSLIL--------GY----------TWLEAVIFLIGIIVANVPEGLLATVTVCL 318 (997)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------cC----------CHHHHHHHHHHHHhhcCCccchHHHHHHH
Confidence 9999999999999888877776666544211 00 24466778899999999999999999999
Q ss_pred HHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHH
Q 001960 425 AFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQS 504 (991)
Q Consensus 425 ~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 504 (991)
+.++++|.++|++||+++++|+||++++||||||||||+|+|+|.+++..+..+..+.................+.+...
T Consensus 319 ~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 398 (997)
T TIGR01106 319 TLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRI 398 (997)
T ss_pred HHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998876654321100000001111233445566
Q ss_pred HHhcCCCceeecCCC----ceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeC---CCeEE
Q 001960 505 IFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP---EGGFR 577 (991)
Q Consensus 505 i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~---~~~~~ 577 (991)
++.|+++....+.++ +....|||+|.||++++...+.+....+..+++++.+||+|+||||+++++.. ++.++
T Consensus 399 ~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~ 478 (997)
T TIGR01106 399 AGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHL 478 (997)
T ss_pred HHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEE
Confidence 777776665433222 23457999999999999877666667778899999999999999999988643 24688
Q ss_pred EEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCC--------CCCCCCCCc
Q 001960 578 VHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA--------DAPIPTEGY 649 (991)
Q Consensus 578 ~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~--------~~~~~e~~l 649 (991)
+++|||||.|+++|++++ .+|+..+++++.++.+.+.+++|+++|+||+++|||.++.+... +.+..|+|+
T Consensus 479 ~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L 557 (997)
T TIGR01106 479 LVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNL 557 (997)
T ss_pred EEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCc
Confidence 999999999999999876 57888899999999999999999999999999999998653111 112337899
Q ss_pred EEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC------------------------ce
Q 001960 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN------------------------GI 705 (991)
Q Consensus 650 ~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~------------------------~~ 705 (991)
+|+|+++++||+||+++++|++|+++||+++|+|||+..||.++|+++|+..++ ..
T Consensus 558 ~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 637 (997)
T TIGR01106 558 CFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKAC 637 (997)
T ss_pred EEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccce
Confidence 999999999999999999999999999999999999999999999999997542 26
Q ss_pred eeeCcccccCCHHHHhhhccccc--eEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHH
Q 001960 706 AIEGPEFREKSDEELSKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVA 783 (991)
Q Consensus 706 vi~g~~~~~~~~~~~~~~~~~~~--v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~a 783 (991)
+++|++++.++++++++.++++. ||||++|+||.++|+.+|++ |++|+|+|||+||+|||++||||||||++|+|+|
T Consensus 638 vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~va 716 (997)
T TIGR01106 638 VVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVS 716 (997)
T ss_pred EEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHhhCCcceecCCcccHHH
Confidence 99999999999999999998764 99999999999999999998 9999999999999999999999999998899999
Q ss_pred HhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHh
Q 001960 784 KESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALAL 863 (991)
Q Consensus 784 k~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal 863 (991)
|++||++++||||++|+++++|||++|.||+|+++|++++|+..+++.++++++..++||+++|+||+|+++|++|+++|
T Consensus 717 k~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al 796 (997)
T TIGR01106 717 KQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISL 796 (997)
T ss_pred HHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccccccCCCCC-CCCCcCHHHHHHHH-HHHHHHHHHHHHHHHh-----cc---ccccc---------CCC-Cc-
Q 001960 864 ATEPPNGDLMKRSPVGR-KGNFISNVMWRNIL-GQSLYQFLIIWYLQTR-----GK---AVFRL---------DGP-DP- 922 (991)
Q Consensus 864 ~~e~~~~~l~~~~P~~~-~~~~~~~~~~~~i~-~~~~~~~~~~~~l~~~-----~~---~~~~~---------~~~-~~- 922 (991)
++|||++++|+|||+.+ .++++++.+|..++ ..++++++..++.++. |. ..+++ ++. +.
T Consensus 797 ~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (997)
T TIGR01106 797 AYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSY 876 (997)
T ss_pred hcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccccccccccccccccccccc
Confidence 99999999999999974 67999998876543 3466665554443321 11 11221 000 00
Q ss_pred ------------ccchhHHHHHHHHHHHHHHHHhhcccc
Q 001960 923 ------------DLILNTLIFNTFVFCQLQRDGKDKRLQ 949 (991)
Q Consensus 923 ------------~~~~~t~~f~~~v~~q~~n~~~~r~~~ 949 (991)
....+|++|++|++||+||.+|||+..
T Consensus 877 ~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~ 915 (997)
T TIGR01106 877 GQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRR 915 (997)
T ss_pred ccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCc
Confidence 014689999999999999999999854
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-132 Score=1237.94 Aligned_cols=789 Identities=37% Similarity=0.539 Sum_probs=692.1
Q ss_pred HHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcch
Q 001960 123 GIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHD 202 (991)
Q Consensus 123 ~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~~~d 202 (991)
.+...+.++...||+.++ +.+|+..||.|+++..+..++|+.++.+|+++++++|+++++++..++....+. .+
T Consensus 32 ~~~~~~~~~~~~GLs~~e--~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~~ 105 (917)
T COG0474 32 ELLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG----VD 105 (917)
T ss_pred hHHHhhcCCcccCCCHHH--HHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC----cc
Confidence 566778889999999966 999999999999999999999999999999999999999999999987542110 34
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecce
Q 001960 203 GLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSV 282 (991)
Q Consensus 203 ~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l 282 (991)
...|...+++..++...++|+.++..+++.+.. +.+++|+|||++++|+++||||||||.|++||+||||++|++++++
T Consensus 106 ~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~-~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l 184 (917)
T COG0474 106 AIVILLVVVINALLGFVQEYRAEKALEALKKMS-SPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL 184 (917)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCc
Confidence 455666677777788888999888888888754 6689999999999999999999999999999999999999999988
Q ss_pred EEecccCCCCCcceecc-------------CCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHH
Q 001960 283 LINESSLTGESEPVNVN-------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVK 349 (991)
Q Consensus 283 ~VDeS~LTGES~pv~k~-------------~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~ 349 (991)
+||||+|||||.|+.|. ..++++|+||.|.+|.+.++|++||.+|+.|++...+.......||+|++
T Consensus 185 ~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~ 264 (917)
T COG0474 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRK 264 (917)
T ss_pred eEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHH
Confidence 99999999999999995 34688999999999999999999999999999999999886677999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Q 001960 350 LNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMK 429 (991)
Q Consensus 350 l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~ 429 (991)
++++...+..++++++++++++.. +.. + . .+...+..++++++.++|+|||+.++++++.++.
T Consensus 265 l~~~~~~l~~~~l~~~~~~~~~~~---~~~----~-------~---~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~ 327 (917)
T COG0474 265 LNKLGKFLLVLALVLGALVFVVGL---FRG----G-------N---GLLESFLTALALAVAAVPEGLPAVVTIALALGAQ 327 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---Hhc----C-------c---cHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 999999999888888777776642 110 0 0 1567899999999999999999999999999999
Q ss_pred HHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcC
Q 001960 430 KMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNT 509 (991)
Q Consensus 430 ~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 509 (991)
+|.+++++||+++++|+||++++||||||||||+|+|+|++++..+...+.+ ..... ..+....+...+++||
T Consensus 328 ~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~------~~~~~-~~~~~~~~l~~~~lc~ 400 (917)
T COG0474 328 RMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID------DKDLK-DSPALLRFLLAAALCN 400 (917)
T ss_pred HHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc------ccccc-cchHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999985110000 00011 1122223445666777
Q ss_pred CCceeecCCCceeecCChhhHHHHHHHHHcCC--ChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHH
Q 001960 510 GGEVVIGEGNKTEILGTPTETAILEFGLLLGG--DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEII 587 (991)
Q Consensus 510 ~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~--~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~i 587 (991)
+.....+ + ++..|||+|.||++++.+.|. +....+..+++++.+||+|+|||||++++.+++++.+++|||||.|
T Consensus 401 ~~~~~~~-~--~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~i 477 (917)
T COG0474 401 SVTPEKN-G--WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVI 477 (917)
T ss_pred ccccccc-C--ceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHH
Confidence 7666544 3 677999999999999999998 7777788889999999999999999999977777999999999999
Q ss_pred HHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCC-CCCCCCcEEEEEeeccCCCcccHH
Q 001960 588 LAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADA-PIPTEGYTCIGIVGIKDPMRPGVK 666 (991)
Q Consensus 588 l~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~-~~~e~~l~~lG~~~i~D~lr~~v~ 666 (991)
+++|+++ +...+++++.++.+++..++|+++|||++++|||.++..+.... +..|+|++|+|+++|+||||++++
T Consensus 478 l~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~ 553 (917)
T COG0474 478 LERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVK 553 (917)
T ss_pred HHHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHH
Confidence 9999976 67778999999999999999999999999999997766533221 568899999999999999999999
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHH
Q 001960 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 744 (991)
Q Consensus 667 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~--~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~ 744 (991)
++|+.|++|||++||+||||+.||.+||++||+..+. ..+++|.+++.++++++.+.+.++.||||++|+||.++|+.
T Consensus 554 ~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~ 633 (917)
T COG0474 554 EAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEA 633 (917)
T ss_pred HHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHH
Confidence 9999999999999999999999999999999998876 45999999999999999999999999999999999999999
Q ss_pred HHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 745 LRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVN 824 (991)
Q Consensus 745 l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n 824 (991)
+|++ |++|+|||||+||+||||+||||||||++|+|+||++||+++.+|+|..++.+++|||++|.|++|+++|.+++|
T Consensus 634 lq~~-g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n 712 (917)
T COG0474 634 LQKS-GHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKN 712 (917)
T ss_pred HHhC-CCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-CChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHH
Q 001960 825 VVALIVNFSSACLTGN-APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLI 903 (991)
Q Consensus 825 ~~~i~~~~~~~~~~~~-~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~ 903 (991)
+..+++.+++.+++.+ .||+++|+||+|+++|.+|+++|+.++|+.+.|++||++++++++++..+..++.+..++.++
T Consensus 713 ~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i 792 (917)
T COG0474 713 VGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAI 792 (917)
T ss_pred HHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHH
Confidence 9999999988888776 899999999999999999999999999999999999999999999999888877777777777
Q ss_pred HHHHHHhcccccccC---CCCc-ccchhHHHHHHHHHHHHHHHHhhccccc
Q 001960 904 IWYLQTRGKAVFRLD---GPDP-DLILNTLIFNTFVFCQLQRDGKDKRLQG 950 (991)
Q Consensus 904 ~~~l~~~~~~~~~~~---~~~~-~~~~~t~~f~~~v~~q~~n~~~~r~~~~ 950 (991)
++++.|....+.... +... .....|+.|++++++|+++.+++|....
T Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~ 843 (917)
T COG0474 793 LFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGR 843 (917)
T ss_pred HHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 665554433322211 1111 4457899999999999999999998743
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-131 Score=1228.42 Aligned_cols=779 Identities=32% Similarity=0.516 Sum_probs=681.3
Q ss_pred CCHHHHHHHhCCCcCCCCC-hhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHH-hhHHHHHHHHHHHHHHHhhhcccCC
Q 001960 119 GGVEGIAEKLSTSITDGIS-TSEHLLNRRKEIYGINKFTESPARGFWVYVWEAL-HDMTLMILAVCALVSLVVGIATEGW 196 (991)
Q Consensus 119 ~~v~~~~~~l~~~~~~Gl~-~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~-~~~~~~illi~ai~s~~~~~~~~~~ 196 (991)
..++++++.|+++...||+ +++ +++|+++||+|+++.++.+++|+.++++| +++++++++++++++++++
T Consensus 7 ~~~~~v~~~l~t~~~~GLs~~~e--v~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g------ 78 (884)
T TIGR01522 7 LSVEETCSKLQTDLQNGLNSSQE--ASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG------ 78 (884)
T ss_pred CCHHHHHHHhCcCcccCCCcHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc------
Confidence 3688999999999999999 655 99999999999999998999999999999 9999999999999999876
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEE
Q 001960 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLF 276 (991)
Q Consensus 197 ~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgil 276 (991)
.|.|++.|++.++++++++.+.+|+.++..++|.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++
T Consensus 79 --~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l-~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~i 155 (884)
T TIGR01522 79 --NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKL-VPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRI 155 (884)
T ss_pred --chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEE
Confidence 578888888888888899999999999999888874 45689999999999999999999999999999999999999
Q ss_pred EeecceEEecccCCCCCcceeccCC-------------CCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCC
Q 001960 277 VSGFSVLINESSLTGESEPVNVNAL-------------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDE 343 (991)
Q Consensus 277 l~g~~l~VDeS~LTGES~pv~k~~~-------------~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~ 343 (991)
++|+++.||||+|||||.|+.|.++ ++++|+||.|.+|+++++|++||.+|++|+|.+++.+.+..+
T Consensus 156 i~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~k 235 (884)
T TIGR01522 156 VEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPK 235 (884)
T ss_pred EEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCC
Confidence 9998789999999999999999754 258999999999999999999999999999999999888888
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHH
Q 001960 344 TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLS 423 (991)
Q Consensus 344 t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~ 423 (991)
+|+|+.+++++.+++.++++++++++++. ++. +. .+...+..++++++++||||||+++|++
T Consensus 236 t~lq~~l~~l~~~~~~~~~~~~~~~~~~~---~~~-----~~----------~~~~~~~~~v~llv~aiP~~Lp~~vt~~ 297 (884)
T TIGR01522 236 TPLQKSMDLLGKQLSLVSFGVIGVICLVG---WFQ-----GK----------DWLEMFTISVSLAVAAIPEGLPIIVTVT 297 (884)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHh-----cC----------CHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 99999999999998877665544433332 111 00 2457788899999999999999999999
Q ss_pred HHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeee-ecCCCCC---------CCCCCCC
Q 001960 424 LAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE-VDNSKGT---------PAFGSSI 493 (991)
Q Consensus 424 l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~-~~~~~~~---------~~~~~~~ 493 (991)
++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+. .+..... .......
T Consensus 298 l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (884)
T TIGR01522 298 LALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFY 377 (884)
T ss_pred HHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCccccccccccccc
Confidence 99999999999999999999999999999999999999999999999987654321 1000000 0000011
Q ss_pred ChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeC-
Q 001960 494 PASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP- 572 (991)
Q Consensus 494 ~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~- 572 (991)
++...++ +...+.|+++..... + .+..|||+|.|+++++.+.|.+ ..+..++.++.+||+|+||||+++++.+
T Consensus 378 ~~~~~~~-l~~~~l~~~~~~~~~-~--~~~~g~p~e~All~~~~~~~~~--~~~~~~~~~~~~pF~s~~k~m~v~~~~~~ 451 (884)
T TIGR01522 378 TVAVSRI-LEAGNLCNNAKFRNE-A--DTLLGNPTDVALIELLMKFGLD--DLRETYIRVAEVPFSSERKWMAVKCVHRQ 451 (884)
T ss_pred CHHHHHH-HHHHhhhCCCeecCC-C--CCcCCChHHHHHHHHHHHcCcH--hHHhhCcEEeEeCCCCCCCeEEEEEEEcC
Confidence 1222333 344445555544322 1 1346899999999999887753 3445678899999999999999998763
Q ss_pred CCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEE
Q 001960 573 EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCI 652 (991)
Q Consensus 573 ~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~l 652 (991)
++++++++|||||.|+.+|++++..+|...+++++.++.+.+.+++++++|+|++++||+++ +++++|+
T Consensus 452 ~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~-----------~~~l~~l 520 (884)
T TIGR01522 452 DRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE-----------KGQLTFL 520 (884)
T ss_pred CCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC-----------CCCeEEE
Confidence 56788999999999999999998878888899999899999999999999999999999864 3579999
Q ss_pred EEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEec
Q 001960 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR 732 (991)
Q Consensus 653 G~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 732 (991)
|+++++||+|||++++|++|+++|++++|+|||+..||.++|+++||......+++|++++.++++++++.+++..||||
T Consensus 521 Gli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar 600 (884)
T TIGR01522 521 GLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFAR 600 (884)
T ss_pred EEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEE
Confidence 99999999999999999999999999999999999999999999999877778899999999999999999999999999
Q ss_pred cChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHH
Q 001960 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYIN 812 (991)
Q Consensus 733 ~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~ 812 (991)
++|+||..+|+.+|++ |++|+|+|||.||+|||++||||||||.+|+++++++||+++++|||+.+++++++||++|+|
T Consensus 601 ~~P~~K~~iv~~lq~~-g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~n 679 (884)
T TIGR01522 601 ASPEHKMKIVKALQKR-GDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNN 679 (884)
T ss_pred CCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 999999999999999999999999999789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHH
Q 001960 813 IQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRN 892 (991)
Q Consensus 813 i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~ 892 (991)
|+|+++|+++.|+..+++.+++.++..+.||+++|+||+|+++|.+|+++|++|||++++|+|||++++++++++.||+.
T Consensus 680 i~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~ 759 (884)
T TIGR01522 680 IKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKK 759 (884)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHH
Confidence 99999999999999999888888888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCcccchhHHHHHHHHHHHHHHHHhhcccc
Q 001960 893 ILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949 (991)
Q Consensus 893 i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~n~~~~r~~~ 949 (991)
++.++++++++.+++++.. +.. + ......+|++|++|++||+||.+|||+..
T Consensus 760 ~~~~g~~~~~~~~~~~~~~--~~~--~-~~~~~~~t~~f~~~v~~q~~~~~~~r~~~ 811 (884)
T TIGR01522 760 ILVSAIIIVVGTLFVFVRE--MQD--G-VITARDTTMTFTCFVFFDMFNALACRSQT 811 (884)
T ss_pred HHHHHHHHHHHHHHHHHHH--HcC--C-cchhhHHHHHHHHHHHHHHHHHHHHccCC
Confidence 9999999987766554421 111 1 11235689999999999999999999853
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-127 Score=1187.03 Aligned_cols=766 Identities=25% Similarity=0.378 Sum_probs=652.0
Q ss_pred CHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhccc---CC
Q 001960 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATE---GW 196 (991)
Q Consensus 120 ~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~---~~ 196 (991)
..+.+.+.|+++. .||++++ +++|+++||+|+++.++.+++|+.++++|+++++++|+++++++++.+.+.. +.
T Consensus 31 ~~~~v~~~l~~~~-~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~ 107 (903)
T PRK15122 31 SLEETLANLNTHR-QGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGE 107 (903)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCc
Confidence 5677888899984 7999987 9999999999999999999999999999999999999999999999875421 22
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCC------eEEEeecCCcccCcEEEeCCCCee
Q 001960 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNG------FRRKISIYDLLPGDIVHLCMGDQV 270 (991)
Q Consensus 197 ~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G------~~~~I~~~dLvvGDIV~l~~Gd~V 270 (991)
...|.+++.|++.+++..++..+.+++.+++.++|.+.. +.+++|+||| ++++|+++||||||+|.|++||+|
T Consensus 108 ~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~-~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~I 186 (903)
T PRK15122 108 ETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMV-RTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMI 186 (903)
T ss_pred cccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEE
Confidence 246899998888888888889999999999999988754 4589999994 799999999999999999999999
Q ss_pred cccEEEEeecceEEecccCCCCCcceeccC----------------------CCCeEEeccEEecCeEEEEEEEEeccch
Q 001960 271 PADGLFVSGFSVLINESSLTGESEPVNVNA----------------------LNPFLLSGTKVQNGSCKMLVTTVGMRTQ 328 (991)
Q Consensus 271 PaDgill~g~~l~VDeS~LTGES~pv~k~~----------------------~~~~l~sGt~v~~g~~~~~V~~~G~~T~ 328 (991)
||||++++|+++.||||+|||||.|+.|.. .++.+|+||.|.+|+++++|++||.+|+
T Consensus 187 PaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~ 266 (903)
T PRK15122 187 PADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTY 266 (903)
T ss_pred eeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccH
Confidence 999999999889999999999999999964 1267999999999999999999999999
Q ss_pred hhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHH
Q 001960 329 WGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIV 408 (991)
Q Consensus 329 ~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~il 408 (991)
+|+|.+++.+ ...++|+|+++++++..+..+++.++.+++++.. +. .+ .+.+.+..+++++
T Consensus 267 ~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~---~~----~~-----------~~~~~l~~aisl~ 327 (903)
T PRK15122 267 FGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLING---FT----KG-----------DWLEALLFALAVA 327 (903)
T ss_pred hhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh---hc----cC-----------CHHHHHHHHHHHH
Confidence 9999999887 5566999999999999887776655544433211 11 00 2456788899999
Q ss_pred HHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCC
Q 001960 409 VVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPA 488 (991)
Q Consensus 409 v~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~ 488 (991)
+++||||||++++++++.++.+|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..
T Consensus 328 V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~----------- 396 (903)
T PRK15122 328 VGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR----------- 396 (903)
T ss_pred HHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC-----------
Confidence 999999999999999999999999999999999999999999999999999999999999987632210
Q ss_pred CCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEE
Q 001960 489 FGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVV 568 (991)
Q Consensus 489 ~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msvi 568 (991)
..++.++ .+ +.|+.. + ...+||+|.|+++++.+.+.+ ..+..++.++.+||+|.+|+|+++
T Consensus 397 ----~~~~~l~---~a-~l~s~~-----~----~~~~~p~e~All~~a~~~~~~--~~~~~~~~~~~~pF~s~~k~ms~v 457 (903)
T PRK15122 397 ----KDERVLQ---LA-WLNSFH-----Q----SGMKNLMDQAVVAFAEGNPEI--VKPAGYRKVDELPFDFVRRRLSVV 457 (903)
T ss_pred ----ChHHHHH---HH-HHhCCC-----C----CCCCChHHHHHHHHHHHcCch--hhhhcCceEEEeeeCCCcCEEEEE
Confidence 0112222 22 222210 0 126899999999999876643 223467788999999999999999
Q ss_pred EEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCC--CCCCCC
Q 001960 569 IELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA--DAPIPT 646 (991)
Q Consensus 569 v~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~--~~~~~e 646 (991)
++..++++++++|||||.++++|+++. .+|...+++++.++++.+.+++++++|+|++++|||+++.++.. ..+..|
T Consensus 458 ~~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e 536 (903)
T PRK15122 458 VEDAQGQHLLICKGAVEEMLAVATHVR-DGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADE 536 (903)
T ss_pred EEcCCCcEEEEECCcHHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccc
Confidence 987677788999999999999999765 46777889999999999999999999999999999988654211 112357
Q ss_pred CCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccc
Q 001960 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK 726 (991)
Q Consensus 647 ~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~ 726 (991)
+|++|+|+++++||+||+++++|++|+++||+++|+||||+.||.++|+++||.. +.+++|++++.++++++.+.+++
T Consensus 537 ~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~ 614 (903)
T PRK15122 537 RDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEE 614 (903)
T ss_pred cCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhh
Confidence 7999999999999999999999999999999999999999999999999999953 46899999999999999999999
Q ss_pred cceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHH
Q 001960 727 IQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 806 (991)
Q Consensus 727 ~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~g 806 (991)
+.||||++|+||.++|+.||++ |++|+|+|||+||+|||++|||||||| +|+|+||++||+|++||||++|++++++|
T Consensus 615 ~~VfAr~sPe~K~~iV~~Lq~~-G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~g 692 (903)
T PRK15122 615 RTVFAKLTPLQKSRVLKALQAN-GHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKG 692 (903)
T ss_pred CCEEEEeCHHHHHHHHHHHHhC-CCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHH
Confidence 9999999999999999999999 999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCCcC
Q 001960 807 RSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFIS 886 (991)
Q Consensus 807 R~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~ 886 (991)
|++|+||+|+++|+++.|+..++..+++.++..+.|++++|+||+|+++|+ |+++|++|||++++| |||+++++++++
T Consensus 693 R~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~~~ 770 (903)
T PRK15122 693 RETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKNIG 770 (903)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhhhH
Confidence 999999999999999999998887777777766789999999999999995 999999999999999 999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccchhHHHHHHHHHHHHHHHHhhcccc
Q 001960 887 NVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949 (991)
Q Consensus 887 ~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~n~~~~r~~~ 949 (991)
+.|+...+..+++.+.. |++.++ .+...........+|..|.+++++|+||.+|+|+.+
T Consensus 771 ~~~~~~g~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~t~~f~~l~~~q~~~~~~~R~~~ 829 (903)
T PRK15122 771 RFMLWIGPTSSIFDITT-FALMWF---VFAANSVEMQALFQSGWFIEGLLSQTLVVHMLRTQK 829 (903)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHH---HhccCcHhhhhhhHHHHHHHHHHHHHHHHHhhCcCC
Confidence 98876333333333222 222221 111111010113568889999999999999999865
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-126 Score=1176.71 Aligned_cols=759 Identities=23% Similarity=0.353 Sum_probs=640.9
Q ss_pred CHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCC
Q 001960 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKG 199 (991)
Q Consensus 120 ~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~ 199 (991)
..+.+.+.|+++. .||++++ +++|+++||+|+++.++++++|+.++++|+++++++++++++++++.+ .
T Consensus 53 ~~~~v~~~l~~~~-~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~--------~ 121 (902)
T PRK10517 53 PEEELWKTFDTHP-EGLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE--------D 121 (902)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------c
Confidence 5788888999987 6999887 999999999999999999999999999999999999999999998875 5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeC------CeEEEeecCCcccCcEEEeCCCCeeccc
Q 001960 200 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN------GFRRKISIYDLLPGDIVHLCMGDQVPAD 273 (991)
Q Consensus 200 ~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~------G~~~~I~~~dLvvGDIV~l~~Gd~VPaD 273 (991)
|++++.|++.+++..+++.+.+++.++..++|.+.. +.+++|+|| |++++|+++||||||+|.|++||+||||
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~-~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMV-SNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 788888887778888888888888888888888754 458999999 7899999999999999999999999999
Q ss_pred EEEEeecceEEecccCCCCCcceeccCCC------------CeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCC
Q 001960 274 GLFVSGFSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341 (991)
Q Consensus 274 gill~g~~l~VDeS~LTGES~pv~k~~~~------------~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~ 341 (991)
|++++|+++.||||+|||||.|+.|..++ +.+|+||.|.+|+++++|++||.+|++|+|.+.+.+...
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999988999999999999999997542 479999999999999999999999999999999998888
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHH
Q 001960 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVT 421 (991)
Q Consensus 342 ~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~ 421 (991)
+++|+|+.++++++++..++++++.++++++.. . .+ .+...+..++++++++||||||++++
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~---~----~~-----------~~~~~l~~alsv~V~~~Pe~LP~~vt 342 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLINGY---T----KG-----------DWWEAALFALSVAVGLTPEMLPMIVT 342 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHH---h----cC-----------CHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 889999999999999888777766665544211 1 00 24567888999999999999999999
Q ss_pred HHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHH
Q 001960 422 LSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLL 501 (991)
Q Consensus 422 ~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 501 (991)
++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++... . .+ ..+++
T Consensus 343 ~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~------~----------~~--~~~ll 404 (902)
T PRK10517 343 STLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS------G----------KT--SERVL 404 (902)
T ss_pred HHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCC------C----------CC--HHHHH
Confidence 999999999999999999999999999999999999999999999998763110 0 00 11222
Q ss_pred HHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEc
Q 001960 502 LQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCK 581 (991)
Q Consensus 502 ~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~K 581 (991)
...+.|+.. . ...+||+|.|+++++...+ .......++.++.+||+|++|+|+++++.+++.+.+++|
T Consensus 405 -~~a~l~~~~--~-------~~~~~p~d~All~~a~~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~K 472 (902)
T PRK10517 405 -HSAWLNSHY--Q-------TGLKNLLDTAVLEGVDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICK 472 (902)
T ss_pred -HHHHhcCCc--C-------CCCCCHHHHHHHHHHHhcc--hhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEe
Confidence 222333221 1 1168999999999986543 122345677889999999999999999877777889999
Q ss_pred CchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCC
Q 001960 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPM 661 (991)
Q Consensus 582 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~l 661 (991)
||||.++++|+++. .+|...+++++.++.+.+..++++++|+|++++|||+++.+........|+|++|+|+++++||+
T Consensus 473 Ga~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~ 551 (902)
T PRK10517 473 GALEEILNVCSQVR-HNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPP 551 (902)
T ss_pred CchHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcc
Confidence 99999999999875 45667889999888999999999999999999999988654322112236899999999999999
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHH
Q 001960 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (991)
Q Consensus 662 r~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~ 741 (991)
||+++++|++|+++||+|+|+||||+.||.++|+++||. ++.+++|++++.++++++++.++++.||||++|+||.++
T Consensus 552 R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~--~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~I 629 (902)
T PRK10517 552 KETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD--AGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERI 629 (902)
T ss_pred hhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--ccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHH
Confidence 999999999999999999999999999999999999995 347999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 742 VKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQL 821 (991)
Q Consensus 742 v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l 821 (991)
|+.+|++ |++|+|+|||+||+|||++|||||||| +|+|+||++||+|+++|||..|++++++||++|+||+|+++|.+
T Consensus 630 V~~Lq~~-G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~l 707 (902)
T PRK10517 630 VTLLKRE-GHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTA 707 (902)
T ss_pred HHHHHHC-CCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHH
Q 001960 822 TVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQF 901 (991)
Q Consensus 822 ~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~ 901 (991)
+.|+..++..+++.++..+.||++.|+||+|+++| +|+++|++|||++++|++||+. +...+.+.| +..+++.+
T Consensus 708 s~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r~-~~~~~~~~~----~~~g~~~~ 781 (902)
T PRK10517 708 SSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQRW-NPADLGRFM----VFFGPISS 781 (902)
T ss_pred HhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCCC-CHHHHHHHH----HHHHHHHH
Confidence 99999988888877776568999999999999999 7899999999999999999972 222333333 33333333
Q ss_pred HHHHHHHHhcccccccCCCCcccchhHHHHHHHHHHHHHHHHhhcccc
Q 001960 902 LIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949 (991)
Q Consensus 902 ~~~~~l~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~n~~~~r~~~ 949 (991)
++.+..++.....++..........+|..|.+++++|+||.+|+|+..
T Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~ 829 (902)
T PRK10517 782 IFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRR 829 (902)
T ss_pred HHHHHHHHHHHHHccccchhhHhHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 222221111111122111100012455669999999999999999865
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-126 Score=1185.56 Aligned_cols=772 Identities=32% Similarity=0.454 Sum_probs=657.8
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHhhhcccCC--CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEe
Q 001960 167 VWEALHDMTLMILAVCALVSLVVGIATEGW--PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR 244 (991)
Q Consensus 167 ~~~~~~~~~~~illi~ai~s~~~~~~~~~~--~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R 244 (991)
+++||+++++++|++++++|++++...++. ...|++++.|++.+++...++.+.+++.++..++|.+ ..+.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~-~~~~~~~ViR 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKE-YESEHAKVLR 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCceEEEE
Confidence 478999999999999999999998765333 2579999999999999999999999999999999887 4566899999
Q ss_pred CCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccCC------------CCeEEeccEEe
Q 001960 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL------------NPFLLSGTKVQ 312 (991)
Q Consensus 245 ~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~~------------~~~l~sGt~v~ 312 (991)
||++++|+++||||||+|.|++||+|||||++++|++|.||||+|||||.|+.|.++ ++++|+||.+.
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEe
Confidence 999999999999999999999999999999999998899999999999999999643 27899999999
Q ss_pred cCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCc
Q 001960 313 NGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGD 392 (991)
Q Consensus 313 ~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (991)
+|+++++|++||.+|+.|+|.+++.+++.++||+|+++++++..+..+.+++++++++++...+... ..+ ..
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~--~~~------~~ 231 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDP--ALG------GG 231 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--ccc------ch
Confidence 9999999999999999999999999888889999999999999998887777766665543221100 000 01
Q ss_pred ChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEE
Q 001960 393 DALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKAC 472 (991)
Q Consensus 393 ~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~ 472 (991)
....+...+..++++++++|||+||+++++++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++
T Consensus 232 ~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~ 311 (917)
T TIGR01116 232 WIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVV 311 (917)
T ss_pred hHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEE
Confidence 11245566778899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EcCee------eeecCCCCCCCC---C-----CCCChhHHHHHHHHHHhcCCCceeecCC-CceeecCChhhHHHHHHHH
Q 001960 473 ICEEI------KEVDNSKGTPAF---G-----SSIPASASKLLLQSIFNNTGGEVVIGEG-NKTEILGTPTETAILEFGL 537 (991)
Q Consensus 473 ~~~~~------~~~~~~~~~~~~---~-----~~~~~~~~~~l~~~i~~~~~~~~~~~~~-~~~~~~g~p~e~All~~a~ 537 (991)
..+.. +...+....+.. . ........+.+....+.|+++....+++ +.....|||+|.||++++.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~ 391 (917)
T TIGR01116 312 ALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVE 391 (917)
T ss_pred ecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHH
Confidence 86532 111111000000 0 0001223444556677787776654322 2334579999999999999
Q ss_pred HcCCChHH----------------HhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCee
Q 001960 538 LLGGDFQA----------------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEV 601 (991)
Q Consensus 538 ~~g~~~~~----------------~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~ 601 (991)
+.|.+... .++.+++++.+||+|+||||+++++.+ +++.+|+|||||.|+++|++++..+|..
T Consensus 392 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~~~~~~~KGApe~il~~c~~~~~~~g~~ 470 (917)
T TIGR01116 392 KMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-TGNKLFVKGAPEGVLERCTHILNGDGRA 470 (917)
T ss_pred HcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC-CcEEEEEcCChHHHHHhccceecCCCCe
Confidence 88876542 245677999999999999999999864 6688999999999999999988877888
Q ss_pred ecCCHHHHHHHHHHHHHHHH-cccceeeeeEEecCCCCC-------CCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHH
Q 001960 602 VPLNEAAVNHLNETIEKFAS-EALRTLCLACMEIGNEFS-------ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICR 673 (991)
Q Consensus 602 ~~l~~~~~~~~~~~~~~~a~-~glR~l~~A~~~l~~~~~-------~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~ 673 (991)
.|++++.++++.+.+++|++ +|+||+++|||.++.+.. ...+.+|+|++|+|+++++||+|++++++|++|+
T Consensus 471 ~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~ 550 (917)
T TIGR01116 471 VPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCR 550 (917)
T ss_pred eeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHH
Confidence 99999999999999999999 999999999999865311 1123568899999999999999999999999999
Q ss_pred HCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----eeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhc
Q 001960 674 SAGITVRMVTGDNINTAKAIARECGILTDNG----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL 749 (991)
Q Consensus 674 ~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~----~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~ 749 (991)
++||+++|+|||+..||.++|+++|+..++. .+++|++++.++++++.+..++..||||++|+||.++|+.+|+.
T Consensus 551 ~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~- 629 (917)
T TIGR01116 551 TAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQ- 629 (917)
T ss_pred HCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhc-
Confidence 9999999999999999999999999986543 57899999999999999999999999999999999999999988
Q ss_pred CCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 750 GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALI 829 (991)
Q Consensus 750 g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~ 829 (991)
|++|+|+|||.||+|||++|||||||| +|++++|++||+++.+|||.+|+++++|||++|.|++|+++|.+++|+..++
T Consensus 630 g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~ 708 (917)
T TIGR01116 630 GEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVV 708 (917)
T ss_pred CCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 830 VNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQT 909 (991)
Q Consensus 830 ~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 909 (991)
+.+++.++..+.||+++|++|+|+++|.+|+++|+++||++++|++||+.++++++++.+|+.|+.++++|+++.+..++
T Consensus 709 ~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ 788 (917)
T TIGR01116 709 CIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFV 788 (917)
T ss_pred HHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888778999999999999999999999999999999999999999999999999999999999999977444332
Q ss_pred hccc---ccc--------cC---CC-----CcccchhHHHHHHHHHHHHHHHHhhccccc
Q 001960 910 RGKA---VFR--------LD---GP-----DPDLILNTLIFNTFVFCQLQRDGKDKRLQG 950 (991)
Q Consensus 910 ~~~~---~~~--------~~---~~-----~~~~~~~t~~f~~~v~~q~~n~~~~r~~~~ 950 (991)
+... +.+ .+ +. +.....+|++|++|++||+||.+|||+.+.
T Consensus 789 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~ 848 (917)
T TIGR01116 789 WWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQ 848 (917)
T ss_pred HHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 2111 111 01 00 012456899999999999999999998643
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-125 Score=1166.53 Aligned_cols=759 Identities=25% Similarity=0.341 Sum_probs=643.5
Q ss_pred CCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCC
Q 001960 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (991)
Q Consensus 119 ~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~ 198 (991)
.+++++.+.|+++. .||++++ +++|+++||+|+++.++.+++|+.++++|+++++++++++++++++.+
T Consensus 18 ~~~~~~~~~l~~~~-~GLs~~e--v~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~-------- 86 (867)
T TIGR01524 18 MGKETLLRKLGVHE-TGLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD-------- 86 (867)
T ss_pred CCHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh--------
Confidence 36888999999986 6999987 999999999999999888999999999999999999999999998774
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEe------CCeEEEeecCCcccCcEEEeCCCCeecc
Q 001960 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR------NGFRRKISIYDLLPGDIVHLCMGDQVPA 272 (991)
Q Consensus 199 ~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R------~G~~~~I~~~dLvvGDIV~l~~Gd~VPa 272 (991)
.|++++.|++.+++..+++.+.+++.+++.++|.+.. +.+++|+| ||++++|+++||||||+|.|++||+|||
T Consensus 87 ~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~-~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPa 165 (867)
T TIGR01524 87 DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMV-KNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPA 165 (867)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcc
Confidence 5788888888888888888888888888888887754 45899999 9999999999999999999999999999
Q ss_pred cEEEEeecceEEecccCCCCCcceeccCCC------------CeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCC
Q 001960 273 DGLFVSGFSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGG 340 (991)
Q Consensus 273 Dgill~g~~l~VDeS~LTGES~pv~k~~~~------------~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~ 340 (991)
||++++|+++.||||+|||||.|+.|..++ +.+|+||.|.+|.++++|++||.+|++|||.+++.+ .
T Consensus 166 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~ 244 (867)
T TIGR01524 166 DARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-R 244 (867)
T ss_pred cEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-C
Confidence 999999988999999999999999997543 479999999999999999999999999999999988 6
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHH
Q 001960 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420 (991)
Q Consensus 341 ~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav 420 (991)
.+++|+|++++++++++..+++++++++++++.. . .+ .+...+..++++++++||||||+++
T Consensus 245 ~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~---~----~~-----------~~~~~~~~al~l~v~~iP~~Lp~~v 306 (867)
T TIGR01524 245 RGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL---M----KG-----------DWLEAFLFALAVAVGLTPEMLPMIV 306 (867)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHH---h----cC-----------CHHHHHHHHHHHHHHhCcchHHHHH
Confidence 6679999999999999988887777666554321 0 00 2456788899999999999999999
Q ss_pred HHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHH
Q 001960 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKL 500 (991)
Q Consensus 421 ~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (991)
+++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++..... ...++
T Consensus 307 t~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~------------------~~~~~ 368 (867)
T TIGR01524 307 SSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE------------------TSERV 368 (867)
T ss_pred HHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC------------------CHHHH
Confidence 999999999999999999999999999999999999999999999999986421110 01122
Q ss_pred HHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEE
Q 001960 501 LLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHC 580 (991)
Q Consensus 501 l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~ 580 (991)
+ ...+.|+.. . ...+||+|.|+++++.... ....+..++.++.+||+|++|+|+++++.+++.+++++
T Consensus 369 l-~~a~l~~~~--~-------~~~~~p~~~Al~~~~~~~~--~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~ 436 (867)
T TIGR01524 369 L-KMAWLNSYF--Q-------TGWKNVLDHAVLAKLDESA--ARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLIC 436 (867)
T ss_pred H-HHHHHhCCC--C-------CCCCChHHHHHHHHHHhhc--hhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEE
Confidence 2 222223221 1 1257999999999986532 22334567888999999999999999887666688999
Q ss_pred cCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCC
Q 001960 581 KGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660 (991)
Q Consensus 581 KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~ 660 (991)
||+||.++++|+++. .+|...+++++.++.+.+.+++++++|+|++++|||+++.+.....+..|++++++|+++++||
T Consensus 437 KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp 515 (867)
T TIGR01524 437 KGAVEEMLTVCTHKR-FGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDP 515 (867)
T ss_pred eCcHHHHHHhchhhh-cCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCC
Confidence 999999999999764 4677778999888899999999999999999999998865432111223678999999999999
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHH
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~ 740 (991)
+||+++++|++|+++||+++|+|||++.||.++|+++||.. +.+++|.+++.++++++.+.++++.||||++|+||.+
T Consensus 516 ~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~ 593 (867)
T TIGR01524 516 PKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSR 593 (867)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHH
Confidence 99999999999999999999999999999999999999964 3689999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 741 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQ 820 (991)
Q Consensus 741 ~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~ 820 (991)
+|+.+|++ |++|+|+|||+||+|||++|||||||| +|+|+||++||+|+++|||+.|++++++||++|+||+|+++|+
T Consensus 594 iV~~lq~~-G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ 671 (867)
T TIGR01524 594 IIGLLKKA-GHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMT 671 (867)
T ss_pred HHHHHHhC-CCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHH
Q 001960 821 LTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900 (991)
Q Consensus 821 l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~ 900 (991)
++.|+..++..+++.++..+.||++.|+||+|+++| +|+++|++|||++++|++||+ ++++.+.+. ++..+++.
T Consensus 672 ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~-~~~~~~~~~----~~~~g~~~ 745 (867)
T TIGR01524 672 ASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQ-WEQKGMGRF----MLCIGPVS 745 (867)
T ss_pred HhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCC-CChhhHHHH----HHHHHHHH
Confidence 999999888888777776668999999999999999 799999999999999987776 656544333 33344443
Q ss_pred HHHHHHHHHhcccccccCCCCcccchhHHHHHHHHHHHHHHHHhhcccc
Q 001960 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949 (991)
Q Consensus 901 ~~~~~~l~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~n~~~~r~~~ 949 (991)
+++.+..++.....+...+.......+|..|.+++++|++|.+|+|+..
T Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~R~~~ 794 (867)
T TIGR01524 746 SIFDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLVVHMIRTEK 794 (867)
T ss_pred HHHHHHHHHHHHHHhcccchhhhhHHHHHHHHHHHHHHHHHHHhhCcCC
Confidence 3322221111111111111111123478899999999999999999865
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-117 Score=1081.59 Aligned_cols=721 Identities=24% Similarity=0.354 Sum_probs=609.1
Q ss_pred CCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHH
Q 001960 135 GISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVV 214 (991)
Q Consensus 135 Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~~~d~~~i~~~lllvi 214 (991)
||++++ +++|+++||+|+++. +.+++|+.++++|+++++++++++++++++++ .|++++.+++.+++..
T Consensus 1 GLs~~e--a~~r~~~~G~N~~~~-~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~ 69 (755)
T TIGR01647 1 GLTSAE--AKKRLAKYGPNELPE-KKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNA 69 (755)
T ss_pred CcCHHH--HHHHHHhcCCCCCCC-CCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHH
Confidence 788877 999999999999987 45567899999999999999999999999876 4788888877777778
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCc
Q 001960 215 FVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 294 (991)
Q Consensus 215 ~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~ 294 (991)
.++.+.+++.++..++|.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.
T Consensus 70 ~i~~~qe~~a~~~~~~L~~~-~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 70 TIGFIEENKAGNAVEALKQS-LAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCcc
Confidence 88888888888888888764 45689999999999999999999999999999999999999999878999999999999
Q ss_pred ceeccCCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 295 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQ 374 (991)
Q Consensus 295 pv~k~~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~ 374 (991)
|+.|..++ .+|+||.|.+|+++++|++||.+|++|+|.+++.+++.+++|+|+.+++++.++.++.+++++++++++..
T Consensus 149 PV~K~~~~-~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~ 227 (755)
T TIGR01647 149 PVTKKTGD-IAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFF 227 (755)
T ss_pred ceEeccCC-eeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998655 69999999999999999999999999999999998888889999999999999988877777666655432
Q ss_pred HHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEE
Q 001960 375 GLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSIC 454 (991)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~ 454 (991)
. . + . .+...+..++++++++|||+||+++|++++.++++|.|+|++||+++++|+||++|+||
T Consensus 228 ~--~-----~-------~---~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~ 290 (755)
T TIGR01647 228 G--R-----G-------E---SFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILC 290 (755)
T ss_pred H--c-----C-------C---CHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEE
Confidence 0 0 0 0 25567888999999999999999999999999999999999999999999999999999
Q ss_pred eCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHH
Q 001960 455 SDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 534 (991)
Q Consensus 455 ~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~ 534 (991)
||||||||+|+|+|.+++..+..+ ++ .+++..+. .|+. ..++||+|.|+++
T Consensus 291 ~DKTGTLT~~~~~v~~~~~~~~~~---------------~~--~~~l~~a~-~~~~-----------~~~~~pi~~Ai~~ 341 (755)
T TIGR01647 291 SDKTGTLTLNKLSIDEILPFFNGF---------------DK--DDVLLYAA-LASR-----------EEDQDAIDTAVLG 341 (755)
T ss_pred ecCCCccccCceEEEEEEecCCCC---------------CH--HHHHHHHH-HhCC-----------CCCCChHHHHHHH
Confidence 999999999999999987643210 11 12222222 2221 1267999999999
Q ss_pred HHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCC-CeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHH
Q 001960 535 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLN 613 (991)
Q Consensus 535 ~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~ 613 (991)
++.+.+ ..+..+++++.+||++.+|+|+++++.++ ++.+.++||+||.+++.|+.. ++.++++.
T Consensus 342 ~~~~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~ 406 (755)
T TIGR01647 342 SAKDLK----EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVE 406 (755)
T ss_pred HHHHhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHHH
Confidence 886543 23456788899999999999999988654 667788999999999999742 23456688
Q ss_pred HHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Q 001960 614 ETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAI 693 (991)
Q Consensus 614 ~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~i 693 (991)
+.+++++++|+|++++|||+ .|++++++|+++++||+|||++++|++|+++||+++|+|||++.||.++
T Consensus 407 ~~~~~~~~~G~rvl~vA~~~-----------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~I 475 (755)
T TIGR01647 407 EKVDELASRGYRALGVARTD-----------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKET 475 (755)
T ss_pred HHHHHHHhCCCEEEEEEEEc-----------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 88999999999999999972 1468999999999999999999999999999999999999999999999
Q ss_pred HHHcCCccC---CceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCC
Q 001960 694 ARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (991)
Q Consensus 694 a~~~gi~~~---~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Ad 770 (991)
|+++||... ...+.+|.+.+.++++++.+.+.++.+|||++|+||.++|+.+|++ |++|+|+|||+||+|||++||
T Consensus 476 A~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~-G~~VamvGDGvNDapAL~~Ad 554 (755)
T TIGR01647 476 ARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKR-GHLVGMTGDGVNDAPALKKAD 554 (755)
T ss_pred HHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhc-CCEEEEEcCCcccHHHHHhCC
Confidence 999999652 1234456666788899999999999999999999999999999999 999999999999999999999
Q ss_pred eeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHH
Q 001960 771 IGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLW 850 (991)
Q Consensus 771 vgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~ 850 (991)
|||||| +|+|+||++||+++++|||.+|++++++||++|+||+|+++|+++.|+..+++.+++.++.+ .||+|+|++|
T Consensus 555 VGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~ 632 (755)
T TIGR01647 555 VGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVI 632 (755)
T ss_pred eeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHH
Confidence 999999 89999999999999999999999999999999999999999999999998877776665544 4699999999
Q ss_pred HHHHHhHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccc---ccccCCC-Ccccch
Q 001960 851 VNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKA---VFRLDGP-DPDLIL 926 (991)
Q Consensus 851 ~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~---~~~~~~~-~~~~~~ 926 (991)
+|+++|. +++++++|++++. ++|. ...++ .++..++..+++.++..+.++++... ++...+. ......
T Consensus 633 ~~l~~d~-~~~~l~~~~~~~~---~~p~---~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (755)
T TIGR01647 633 IAILNDG-TIMTIAYDNVKPS---KLPQ---RWNLR-EVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNL 704 (755)
T ss_pred HHHHHhH-hHhhccCCCCCCC---CCCC---ccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhh
Confidence 9999996 6999999998753 3443 33333 66666667777777655544432211 1111111 112357
Q ss_pred hHHHHHHHHHHHHHHHHhhcccccc
Q 001960 927 NTLIFNTFVFCQLQRDGKDKRLQGY 951 (991)
Q Consensus 927 ~t~~f~~~v~~q~~n~~~~r~~~~~ 951 (991)
+|+.|.++++.|.|+.+++|+-...
T Consensus 705 ~t~~f~~~~~~~~~~~~~~r~~~~~ 729 (755)
T TIGR01647 705 QSLIYLQVSISGQATIFVTRTHGFF 729 (755)
T ss_pred HHHHHHHHHHHHHHHHheeccCCCC
Confidence 8999999999999999999976543
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-119 Score=1015.18 Aligned_cols=847 Identities=30% Similarity=0.419 Sum_probs=713.5
Q ss_pred hhCCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcc---
Q 001960 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIAT--- 193 (991)
Q Consensus 117 ~~~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~--- 193 (991)
+...++++++.+.++..+||+..+ +.+++.+-|+|.+++|+..+-|..+.+|+++...++++++|+++++.....
T Consensus 40 H~~~~~eL~~r~~t~~~~Glt~~~--A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~ 117 (1019)
T KOG0203|consen 40 HKLSVDELCERYGTSVSQGLTSQE--AAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQAST 117 (1019)
T ss_pred ccCCHHHHHHHhcCChhhcccHHH--HHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhccc
Confidence 456799999999999999999987 899999999999999999999999999999999999999999887644321
Q ss_pred cC--CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---hcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCC
Q 001960 194 EG--WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR---EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGD 268 (991)
Q Consensus 194 ~~--~~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~---~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd 268 (991)
+. .....|-+. .+..+++++.+..|.|+.+-.+..+ ...+..++|+|||+.+.+..+||||||+|.++-||
T Consensus 118 ~~~~~~~nly~gi----iL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~Gd 193 (1019)
T KOG0203|consen 118 EDDPSDDNLYLGI----VLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGD 193 (1019)
T ss_pred CCCCCCcceEEEE----EEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCC
Confidence 11 122333332 2334445555556666555444332 34577999999999999999999999999999999
Q ss_pred eecccEEEEeecceEEecccCCCCCcceeccC---------CCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCC
Q 001960 269 QVPADGLFVSGFSVLINESSLTGESEPVNVNA---------LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 339 (991)
Q Consensus 269 ~VPaDgill~g~~l~VDeS~LTGES~pv~k~~---------~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~ 339 (991)
+||||.+++++..|++|+|+|||||+|.++++ ..++-|.+|.+++|.+.++|++||.+|.+|+|..+...-
T Consensus 194 rVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~ 273 (1019)
T KOG0203|consen 194 RVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGL 273 (1019)
T ss_pred cccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccC
Confidence 99999999999999999999999999998852 245779999999999999999999999999999998887
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHH
Q 001960 340 GDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419 (991)
Q Consensus 340 ~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~la 419 (991)
+..++|++..++++..++..+++.+++..|++.++. +. .++.++...+.++++.+|+||+..
T Consensus 274 ~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~--------gy----------~~l~avv~~i~iivAnvPeGL~~t 335 (1019)
T KOG0203|consen 274 EDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL--------GY----------EWLRAVVFLIGIIVANVPEGLLAT 335 (1019)
T ss_pred CCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh--------cc----------hhHHHhhhhheeEEecCcCCccce
Confidence 888899999999999998888777777666543211 11 456777778999999999999999
Q ss_pred HHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHH
Q 001960 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASK 499 (991)
Q Consensus 420 v~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (991)
+|.+++...+||.+++++||++.+.|+||+.++||+|||||||+|+|+|.++|.++...+.+.............+....
T Consensus 336 vTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~ 415 (1019)
T KOG0203|consen 336 VTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFI 415 (1019)
T ss_pred ehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHH
Confidence 99999999999999999999999999999999999999999999999999999988776544321111112222345556
Q ss_pred HHHHHHHhcCCCceeecCCC----ceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCC--
Q 001960 500 LLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE-- 573 (991)
Q Consensus 500 ~l~~~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~-- 573 (991)
.+......|+.+.....+.+ +....|++.|.||++++...-.+....|+..+.+..+||||.+|+.-.+.+..+
T Consensus 416 ~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~ 495 (1019)
T KOG0203|consen 416 ALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPS 495 (1019)
T ss_pred HHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCC
Confidence 67778888888887766554 335589999999999998766666788888999999999999999888777544
Q ss_pred -CeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCC--------CCCCCC
Q 001960 574 -GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF--------SADAPI 644 (991)
Q Consensus 574 -~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~--------~~~~~~ 644 (991)
.++.+.+|||||.++++|+.++ .+|+..|++++.++.+.+...++...|-||++|+++.++++. .+..+.
T Consensus 496 ~~~~~l~mKGape~il~~CSTi~-i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~ 574 (1019)
T KOG0203|consen 496 DPRFLLVMKGAPERILDRCSTIL-INGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNF 574 (1019)
T ss_pred CccceeeecCChHHHHhhcccee-ecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCC
Confidence 4677889999999999999875 578889999999999999999999999999999999987551 122355
Q ss_pred CCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--------------------
Q 001960 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG-------------------- 704 (991)
Q Consensus 645 ~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~-------------------- 704 (991)
+..++.|+|++.+-||+|+.+|+++..||+|||+|+|+|||++.||+++|++.||..++.
T Consensus 575 p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~ 654 (1019)
T KOG0203|consen 575 PTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSR 654 (1019)
T ss_pred cchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCcc
Confidence 678999999999999999999999999999999999999999999999999999875432
Q ss_pred ----eeeeCcccccCCHHHHhhhccccc--eEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCC
Q 001960 705 ----IAIEGPEFREKSDEELSKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778 (991)
Q Consensus 705 ----~vi~g~~~~~~~~~~~~~~~~~~~--v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~ 778 (991)
.|++|.++..++++++++++.... ||||.||+||+.||+..|++ |.+|+++|||+||+||||.||||||||++
T Consensus 655 ~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~-GaiVaVTGDGVNDsPALKKADIGVAMGia 733 (1019)
T KOG0203|consen 655 DAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIA 733 (1019)
T ss_pred ccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhc-CcEEEEeCCCcCCChhhcccccceeeccc
Confidence 689999999999999999995443 99999999999999999999 99999999999999999999999999999
Q ss_pred CcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHH
Q 001960 779 GTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTL 858 (991)
Q Consensus 779 g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l 858 (991)
|+|++|++||++++||||++|+..+++||.+|+|++|.|.|.++.|+..+.+.+++.+++.+.|+.++++|.+.+..|+.
T Consensus 734 GSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmv 813 (1019)
T KOG0203|consen 734 GSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIV 813 (1019)
T ss_pred cchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccc
Confidence 99999999999999999999999999999999999999999999999999999998999999999999999999999999
Q ss_pred HHHHhccCCCCccccccCCCC-CCCCCcCHHHHHHHHH-HHHHHHHHHHHHHHhc---ccc-----cccC----------
Q 001960 859 GALALATEPPNGDLMKRSPVG-RKGNFISNVMWRNILG-QSLYQFLIIWYLQTRG---KAV-----FRLD---------- 918 (991)
Q Consensus 859 ~~lal~~e~~~~~l~~~~P~~-~~~~~~~~~~~~~i~~-~~~~~~~~~~~l~~~~---~~~-----~~~~---------- 918 (991)
||++||+|+|+.++|+|+|+. +++.|+|.+....-.+ .+++|++..|+-+|.. ..+ +++.
T Consensus 814 PAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~D 893 (1019)
T KOG0203|consen 814 PAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVND 893 (1019)
T ss_pred hhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhh
Confidence 999999999999999999996 8889999887654444 3677776655544321 111 1111
Q ss_pred -----CC--C------cccchhHHHHHHHHHHHHHHHHhhcccc------ccc-------------hhhhhhcccccccc
Q 001960 919 -----GP--D------PDLILNTLIFNTFVFCQLQRDGKDKRLQ------GYT-------------EELCLCSCAHLHRS 966 (991)
Q Consensus 919 -----~~--~------~~~~~~t~~f~~~v~~q~~n~~~~r~~~------~~~-------------~~l~~~~~~~~~~~ 966 (991)
|. + -+...+|..|.+.|++|+++.+-|.+-+ ++- ..+.++|++++...
T Consensus 894 l~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~ 973 (1019)
T KOG0203|consen 894 LTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYA 973 (1019)
T ss_pred hhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHH
Confidence 00 0 0123579999999999999999994322 221 23357888999999
Q ss_pred cccCccccceeeeecCccceeee
Q 001960 967 FSNNNHRAPGYICKYNSSQFATV 989 (991)
Q Consensus 967 ~~~~~~~n~~~~~~~~~~~~~~~ 989 (991)
|+++|++..||++.+|++.+.-|
T Consensus 974 l~~~pl~~~~wl~a~P~~ilIfv 996 (1019)
T KOG0203|consen 974 LGMYPLKFQWWLVAFPFGILIFV 996 (1019)
T ss_pred hccCCCCcEEEEecccceeeeee
Confidence 99999999999999999987654
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-114 Score=1098.17 Aligned_cols=752 Identities=23% Similarity=0.311 Sum_probs=600.8
Q ss_pred CCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHH
Q 001960 133 TDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILL 212 (991)
Q Consensus 133 ~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~~~d~~~i~~~lll 212 (991)
..||+.++ +++|++.||+|+++.+ .++||+++++++.+|++++++++.++++.- +.|++++.+++.+++
T Consensus 137 ~~GLs~~e--~~~r~~~yG~N~i~~~-~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~--------~~~~~~~~i~~i~~~ 205 (1054)
T TIGR01657 137 SNGLTTGD--IAQRKAKYGKNEIEIP-VPSFLELLKEEVLHPFYVFQVFSVILWLLD--------EYYYYSLCIVFMSST 205 (1054)
T ss_pred ccCCCHHH--HHHHHHhcCCCeeecC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhh--------hhHHHHHHHHHHHHH
Confidence 46999887 9999999999999875 589999999999999998887775555432 257788777666555
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeC--CCCeecccEEEEeecceEEecccCC
Q 001960 213 VVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLC--MGDQVPADGLFVSGFSVLINESSLT 290 (991)
Q Consensus 213 vi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~--~Gd~VPaDgill~g~~l~VDeS~LT 290 (991)
...++...+++..++.+++. .++..++|+|||++++|+++||||||+|.|+ +||+|||||+|++|+ |.||||+||
T Consensus 206 ~~~~~~~~~~k~~~~L~~~~--~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LT 282 (1054)
T TIGR01657 206 SISLSVYQIRKQMQRLRDMV--HKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLT 282 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHhh--cCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEeccccc
Confidence 55555544444444333332 2456899999999999999999999999999 999999999999995 899999999
Q ss_pred CCCcceeccCC-----------------CCeEEeccEEec-------CeEEEEEEEEeccchhhHHHhhhcCCCCCCChh
Q 001960 291 GESEPVNVNAL-----------------NPFLLSGTKVQN-------GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPL 346 (991)
Q Consensus 291 GES~pv~k~~~-----------------~~~l~sGt~v~~-------g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~l 346 (991)
|||.|+.|.+. ++++|+||.|.+ |.+.++|++||.+|..|++.+++..++...+++
T Consensus 283 GES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~ 362 (1054)
T TIGR01657 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKF 362 (1054)
T ss_pred CCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCch
Confidence 99999999631 347999999985 789999999999999999999998888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Q 001960 347 QVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAF 426 (991)
Q Consensus 347 q~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~ 426 (991)
++...++...+..+ +++.+++++...+.. + ..+...+..++++++++||++||+++++++++
T Consensus 363 ~~~~~~~~~~l~~~----a~i~~i~~~~~~~~~----~----------~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~ 424 (1054)
T TIGR01657 363 YKDSFKFILFLAVL----ALIGFIYTIIELIKD----G----------RPLGKIILRSLDIITIVVPPALPAELSIGINN 424 (1054)
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHHHc----C----------CcHHHHHHHHHHHHHhhcCchHHHHHHHHHHH
Confidence 88877766544333 333332222111110 1 13567788899999999999999999999999
Q ss_pred HHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHH
Q 001960 427 AMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIF 506 (991)
Q Consensus 427 ~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 506 (991)
++.||+|+|++||+++++|++|++|++|||||||||+|+|+|.+++..+......... .. ........+...++
T Consensus 425 ~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~a 498 (1054)
T TIGR01657 425 SLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIV--TE----DSSLKPSITHKALA 498 (1054)
T ss_pred HHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCcccccccc--cc----ccccCchHHHHHHH
Confidence 9999999999999999999999999999999999999999999998754321100000 00 00012223445667
Q ss_pred hcCCCceeecCCCceeecCChhhHHHHHHHHHc-CC--C--hHH----------HhhhcceEEEecCCCCCceEEEEEEe
Q 001960 507 NNTGGEVVIGEGNKTEILGTPTETAILEFGLLL-GG--D--FQA----------ERQASKIVKVEPFNSVKKQMGVVIEL 571 (991)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~-g~--~--~~~----------~~~~~~il~~~pF~s~~k~msviv~~ 571 (991)
.||+..... + ...|||+|.|+++++... .. + ... ....+++++.+||+|++|||||+++.
T Consensus 499 ~C~~~~~~~---~--~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~ 573 (1054)
T TIGR01657 499 TCHSLTKLE---G--KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVST 573 (1054)
T ss_pred hCCeeEEEC---C--EEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEE
Confidence 787764432 2 568999999999986311 10 0 000 02467899999999999999999997
Q ss_pred CC-CeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCC-----CCCCCCC
Q 001960 572 PE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SADAPIP 645 (991)
Q Consensus 572 ~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~-----~~~~~~~ 645 (991)
++ +++++++|||||.|+++|+.. ..++.+.+.+++|+++|+||+++|||++++.. ..+++..
T Consensus 574 ~~~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~ 641 (1054)
T TIGR01657 574 NDERSPDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAV 641 (1054)
T ss_pred cCCCeEEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHH
Confidence 64 567899999999999999841 11345778899999999999999999987421 1123567
Q ss_pred CCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc---------------------
Q 001960 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--------------------- 704 (991)
Q Consensus 646 e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~--------------------- 704 (991)
|+|++|+|+++++||+||+++++|++|+++||+++|+||||+.||.++|++|||.+++.
T Consensus 642 E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~ 721 (1054)
T TIGR01657 642 ESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFE 721 (1054)
T ss_pred hcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEE
Confidence 89999999999999999999999999999999999999999999999999999975431
Q ss_pred --------------------------------eeeeCccccc---CCHHHHhhhccccceEeccChhhHHHHHHHHHhhc
Q 001960 705 --------------------------------IAIEGPEFRE---KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL 749 (991)
Q Consensus 705 --------------------------------~vi~g~~~~~---~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~ 749 (991)
.+++|++++. +.++++.+++.++.||||++|+||.++|+.+|+.
T Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~- 800 (1054)
T TIGR01657 722 VIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKL- 800 (1054)
T ss_pred ecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhC-
Confidence 4677777654 4567888999999999999999999999999998
Q ss_pred CCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 750 GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALI 829 (991)
Q Consensus 750 g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~ 829 (991)
|++|+|||||+||+||||+|||||||| . .|+ ..+||+++.+|+|++|+++|++||+++.|++++++|.+.++++..+
T Consensus 801 g~~V~m~GDG~ND~~ALK~AdVGIam~-~-~da-s~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~ 877 (1054)
T TIGR01657 801 DYTVGMCGDGANDCGALKQADVGISLS-E-AEA-SVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFY 877 (1054)
T ss_pred CCeEEEEeCChHHHHHHHhcCcceeec-c-ccc-eeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 3 354 4899999999999999999999999999999999999999988755
Q ss_pred HHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 830 VNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQT 909 (991)
Q Consensus 830 ~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 909 (991)
..++ ++....||+++|+||+|++++++++++|+.++|.+++|++|| .++++++.++..+++|+++++++.++.++
T Consensus 878 ~~~~--l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P---~~~l~~~~~~~si~~q~~i~~~~~~~~~~ 952 (1054)
T TIGR01657 878 SVSI--LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERP---PSNLFSVYILTSVLIQFVLHILSQVYLVF 952 (1054)
T ss_pred HHHH--HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCC---CccccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4443 233459999999999999999999999999999999999999 47899999999999999999988777665
Q ss_pred hccc--ccc------cCCCCcccchhHHHHHHHHHHHHHHHHhhcccc
Q 001960 910 RGKA--VFR------LDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949 (991)
Q Consensus 910 ~~~~--~~~------~~~~~~~~~~~t~~f~~~v~~q~~n~~~~r~~~ 949 (991)
.... ++. .++.......+|++| .++.+|.++.++++...
T Consensus 953 ~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g 999 (1054)
T TIGR01657 953 ELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKG 999 (1054)
T ss_pred HHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCC
Confidence 4322 321 111111223579999 66666777778887653
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-109 Score=1053.01 Aligned_cols=765 Identities=24% Similarity=0.326 Sum_probs=612.3
Q ss_pred cCCCcCCCCCCccH---HHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 150 YGINKFTESPARGF---WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSL 226 (991)
Q Consensus 150 ~G~N~~~~~~~~~f---~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~~~d~~~i~~~lllvi~v~~~~~~~~~~ 226 (991)
|.+|.+...++..+ ++.+|+||+++.+++|++++++++++.++.. +..+.++|+++++++++++++.|+.
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~-------~~~t~~~pL~~v~~~~~~~~~~ed~ 73 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPT-------YRGTSIVPLAFVLIVTAIKEAIEDI 73 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC-------CccHhHHhHHHHHHHHHHHHHHHHH
Confidence 56799887776665 5899999999999999999999999887542 2345677899999999999999999
Q ss_pred HHHHhhhhcCCcEEEEEeC-CeEEEeecCCcccCcEEEeCCCCeecccEEEEeecc----eEEecccCCCCCcceeccCC
Q 001960 227 QFKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVNAL 301 (991)
Q Consensus 227 ~~~~l~~~~~~~~v~V~R~-G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~----l~VDeS~LTGES~pv~k~~~ 301 (991)
++++.+++.++..++|+|+ |++++|+|+||+|||+|.|++||+|||||+++++++ |+||||+|||||+|+.|...
T Consensus 74 ~r~~~d~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~ 153 (1057)
T TIGR01652 74 RRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQAL 153 (1057)
T ss_pred HHHHhHHHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecc
Confidence 9999999999999999997 899999999999999999999999999999999765 89999999999999988421
Q ss_pred -----------------------------------------------CCeEEeccEEec-CeEEEEEEEEeccchhhHHH
Q 001960 302 -----------------------------------------------NPFLLSGTKVQN-GSCKMLVTTVGMRTQWGKLM 333 (991)
Q Consensus 302 -----------------------------------------------~~~l~sGt~v~~-g~~~~~V~~~G~~T~~g~i~ 333 (991)
++++++||.+.+ |++.|+|++||.+|++ +
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~---~ 230 (1057)
T TIGR01652 154 EETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKL---M 230 (1057)
T ss_pred hhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhh---h
Confidence 256889999999 9999999999999955 4
Q ss_pred hhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccC-----CcChHHHHHHHHHHHHHH
Q 001960 334 ATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWS-----GDDALEILEFFAIAVTIV 408 (991)
Q Consensus 334 ~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~il 408 (991)
.+....+.++|++++++|++..++..+.++++++++++. .++........|+.. ......++..|..++.++
T Consensus 231 ~n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~---~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~ 307 (1057)
T TIGR01652 231 RNATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGA---GIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILF 307 (1057)
T ss_pred hcCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHH---HheecccCCCccceecCcccccchhHHHHHHHHHHHHH
Confidence 455666778899999999998877766665555444432 111110011122211 011123445667788999
Q ss_pred HHHcCCchHHHHHHHHHHHH------HHHhcc----ccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeee
Q 001960 409 VVAVPEGLPLAVTLSLAFAM------KKMMND----KALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478 (991)
Q Consensus 409 v~~vP~~L~lav~~~l~~~~------~~~~~~----~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 478 (991)
+.++|++|+..++++.+.++ .+|.++ +++||+++++|+||++++||+|||||||+|+|+++++++++..|
T Consensus 308 ~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y 387 (1057)
T TIGR01652 308 SSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSY 387 (1057)
T ss_pred hhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEe
Confidence 99999999999999999988 788865 49999999999999999999999999999999999999998877
Q ss_pred eecCCC-------CCC-----C----CC-----------------CCCChhHHHHHHHHHHhcCCCceeecCC--C-cee
Q 001960 479 EVDNSK-------GTP-----A----FG-----------------SSIPASASKLLLQSIFNNTGGEVVIGEG--N-KTE 522 (991)
Q Consensus 479 ~~~~~~-------~~~-----~----~~-----------------~~~~~~~~~~l~~~i~~~~~~~~~~~~~--~-~~~ 522 (991)
+.+... ... + .. .....+....+..+++.||++....+++ + ..+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y 467 (1057)
T TIGR01652 388 GDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITY 467 (1057)
T ss_pred cCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEE
Confidence 522110 000 0 00 0000112234556788888877664222 2 224
Q ss_pred ecCChhhHHHHHHHHHcCCChHHH--------------hhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHH
Q 001960 523 ILGTPTETAILEFGLLLGGDFQAE--------------RQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIIL 588 (991)
Q Consensus 523 ~~g~p~e~All~~a~~~g~~~~~~--------------~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il 588 (991)
..+||+|.||+++|...|+.+... ...+++++++||+|+||||||+++.+++++.+++|||||.|+
T Consensus 468 ~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il 547 (1057)
T TIGR01652 468 QAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIF 547 (1057)
T ss_pred EccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHH
Confidence 479999999999999998765421 246889999999999999999999888889999999999999
Q ss_pred HhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCC--------------CC--------CCCCC
Q 001960 589 AACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS--------------AD--------APIPT 646 (991)
Q Consensus 589 ~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~--------------~~--------~~~~e 646 (991)
++|++ .+++.++.+.+.+++|+.+|+||+++|||.++++.. .+ .+.+|
T Consensus 548 ~~~~~----------~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE 617 (1057)
T TIGR01652 548 KRLSS----------GGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIE 617 (1057)
T ss_pred HHhhc----------cchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 99974 123456778899999999999999999999875310 00 13468
Q ss_pred CCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----------------------
Q 001960 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG---------------------- 704 (991)
Q Consensus 647 ~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~---------------------- 704 (991)
+|++|+|+++++|||||||+++|+.|++|||++||+|||+.+||.++|++|||.+++.
T Consensus 618 ~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~ 697 (1057)
T TIGR01652 618 KDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKF 697 (1057)
T ss_pred hcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999986542
Q ss_pred -------------------eeeeCcccccCCHH----HHhhhcccc--ceEeccChhhHHHHHHHHHhhcCCEEEEeCCC
Q 001960 705 -------------------IAIEGPEFREKSDE----ELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDG 759 (991)
Q Consensus 705 -------------------~vi~g~~~~~~~~~----~~~~~~~~~--~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG 759 (991)
++++|++++.+.++ ++.+++.++ .||||++|+||+++|+.+|+..|++|+|||||
T Consensus 698 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG 777 (1057)
T TIGR01652 698 GLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDG 777 (1057)
T ss_pred HHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 36777777654433 344455444 49999999999999999998668999999999
Q ss_pred CCChHhhhhCCeeEEecCCCcH--HHHhhcCEEeccCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 760 TNDAPALHEADIGLAMGIAGTE--VAKESADVIILDDNFSTIVTVA-KWGRSVYINIQKFVQFQLTVNVVALIVNFSSAC 836 (991)
Q Consensus 760 ~ND~~al~~Advgiamg~~g~~--~ak~~ad~vl~~~~~~~i~~~i-~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~ 836 (991)
+||+|||++||||| |+.|+| .|+++||+++.+ |..+.+++ .|||++|.|+++++.|.+++|++.+++.+++.+
T Consensus 778 ~ND~~mlk~AdVGI--gi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~ 853 (1057)
T TIGR01652 778 ANDVSMIQEADVGV--GISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSF 853 (1057)
T ss_pred CccHHHHhhcCeee--EecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 557788 489999999986 99999986 899999999999999999999999999999888
Q ss_pred hcC---CCChhHHHHHHHHHHHhHHHHHHhcc--CCCCccccccCCC----CCCCCCcCHHHHHHHHHHHHHHHHHHHHH
Q 001960 837 LTG---NAPLTAVQLLWVNMIMDTLGALALAT--EPPNGDLMKRSPV----GRKGNFISNVMWRNILGQSLYQFLIIWYL 907 (991)
Q Consensus 837 ~~~---~~pl~~~qll~~nli~d~l~~lal~~--e~~~~~l~~~~P~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 907 (991)
+++ .+|+++++++|+|+++|++|++++|. +++++++|.++|+ +++.++++...+..|+..++||+++++++
T Consensus 854 ~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~ 933 (1057)
T TIGR01652 854 YNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFF 933 (1057)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 655 45889999999999999999999985 6778899999997 67788899888878888999999998776
Q ss_pred HHhccc---ccccCCCC-cccchhHHHHHHHHHHHHHHH
Q 001960 908 QTRGKA---VFRLDGPD-PDLILNTLIFNTFVFCQLQRD 942 (991)
Q Consensus 908 ~~~~~~---~~~~~~~~-~~~~~~t~~f~~~v~~q~~n~ 942 (991)
.+.... .+ .+|.. ......+++|.+.++...+..
T Consensus 934 ~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~ 971 (1057)
T TIGR01652 934 PMFAYILGDFV-SSGSLDDFSSVGVIVFTALVVIVNLKI 971 (1057)
T ss_pred HHHHHcCCccc-cCCcccchhhHHHHHHHHHHHHHHHHH
Confidence 543221 11 12321 123456777777766554433
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-103 Score=984.09 Aligned_cols=736 Identities=21% Similarity=0.291 Sum_probs=587.8
Q ss_pred HhcCCCcCCCCCCccH--H-HHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 001960 148 EIYGINKFTESPARGF--W-VYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQ 224 (991)
Q Consensus 148 ~~~G~N~~~~~~~~~f--~-~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~~~d~~~i~~~lllvi~v~~~~~~~~ 224 (991)
..|..|.+...++..+ . +.+|+||++..|+||++++++++++.++.. ...+.++|+++++++++++++.+
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~-------~~~t~~~PL~~vl~v~~ike~~E 157 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF-------GRGASILPLAFVLLVTAVKDAYE 157 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC-------CcchHHHHHHHHHHHHHHHHHHH
Confidence 3699999987765432 2 779999999999999999999999987642 23456789999999999999999
Q ss_pred HHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecc----eEEecccCCCCCcceeccC
Q 001960 225 SLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVNA 300 (991)
Q Consensus 225 ~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~----l~VDeS~LTGES~pv~k~~ 300 (991)
+.++++.+++.|+..++|+|+|.+++++|+||+|||+|.|++||+|||||+++++++ |+||||+|||||+|+.|..
T Consensus 158 d~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~ 237 (1178)
T PLN03190 158 DWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYA 237 (1178)
T ss_pred HHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecc
Confidence 999999999999999999999999999999999999999999999999999999554 8999999999999998831
Q ss_pred --------------------------------------------CCCeEEeccEEecC-eEEEEEEEEeccchhhHHHhh
Q 001960 301 --------------------------------------------LNPFLLSGTKVQNG-SCKMLVTTVGMRTQWGKLMAT 335 (991)
Q Consensus 301 --------------------------------------------~~~~l~sGt~v~~g-~~~~~V~~~G~~T~~g~i~~~ 335 (991)
.++++++||.+.+. ++.|+|++||.+| |++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K~~~N 314 (1178)
T PLN03190 238 KQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRET---KAMLN 314 (1178)
T ss_pred cchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhh---hHhhc
Confidence 13467778888774 7999999999999 67777
Q ss_pred hcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcc--ccCCc---------C--h----HHHH
Q 001960 336 LSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHW--TWSGD---------D--A----LEIL 398 (991)
Q Consensus 336 ~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~--~~~~~---------~--~----~~~~ 398 (991)
...+..+.|++++++|++..++..+.+++++++.++.. .+... .....| .|... . . ...+
T Consensus 315 ~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~--~~~~~-~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (1178)
T PLN03190 315 NSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAA--VWLRR-HRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIF 391 (1178)
T ss_pred CCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHH--hhhcc-ccccccccccccccccccccccccccchhhHHHH
Confidence 77777889999999999988877666665555443321 11111 011111 11100 0 0 1112
Q ss_pred HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccc----------cccccchhhhccCCeEEEEeCccCccccCceEE
Q 001960 399 EFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDK----------ALVRHLAACETMGSATSICSDKTGTLTTNHMTV 468 (991)
Q Consensus 399 ~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~----------ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v 468 (991)
..|...+.++...+|++|++.+.+.....+..|.+|. +.||+.+.+|+||+|++||+|||||||+|+|++
T Consensus 392 ~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~f 471 (1178)
T PLN03190 392 FTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEF 471 (1178)
T ss_pred HHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEE
Confidence 2333445666689999999999999977777776654 789999999999999999999999999999999
Q ss_pred EEEEEcCeeeeecCCC-------------C---CCCCC------------CCCC-h--hHHHHHHHHHHhcCCCceeecC
Q 001960 469 LKACICEEIKEVDNSK-------------G---TPAFG------------SSIP-A--SASKLLLQSIFNNTGGEVVIGE 517 (991)
Q Consensus 469 ~~~~~~~~~~~~~~~~-------------~---~~~~~------------~~~~-~--~~~~~l~~~i~~~~~~~~~~~~ 517 (991)
+++++++..|+..... . .+... .... + .....+..+++.||++.+...+
T Consensus 472 k~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~ 551 (1178)
T PLN03190 472 QCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVD 551 (1178)
T ss_pred EEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccC
Confidence 9999988776421100 0 00000 0000 0 1123456788889988764221
Q ss_pred C--C----ce-eecCChhhHHHHHHHHHcCC------------ChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEE
Q 001960 518 G--N----KT-EILGTPTETAILEFGLLLGG------------DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRV 578 (991)
Q Consensus 518 ~--~----~~-~~~g~p~e~All~~a~~~g~------------~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~ 578 (991)
+ + .. +.++||+|.||+++|.+.|+ +....+..+++++++||+|+||||||+++.+++.+.+
T Consensus 552 ~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l 631 (1178)
T PLN03190 552 DTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKV 631 (1178)
T ss_pred CCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEE
Confidence 1 1 12 44569999999999999997 3334556899999999999999999999988888999
Q ss_pred EEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCC------------------
Q 001960 579 HCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA------------------ 640 (991)
Q Consensus 579 ~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~------------------ 640 (991)
++|||||.|+++|++.. +++.++.+.+.+++|+++|+|||++|||+++++..+
T Consensus 632 ~~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~ 702 (1178)
T PLN03190 632 FVKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAA 702 (1178)
T ss_pred EEecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHH
Confidence 99999999999997542 223456788899999999999999999999753110
Q ss_pred ----CCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc------------
Q 001960 641 ----DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG------------ 704 (991)
Q Consensus 641 ----~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~------------ 704 (991)
..+.+|+|++++|+++++||+|++++++|++|+++||++||+|||+.+||.+||++|||.+++.
T Consensus 703 ~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~ 782 (1178)
T PLN03190 703 LLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKES 782 (1178)
T ss_pred HHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhh
Confidence 0134689999999999999999999999999999999999999999999999999999975431
Q ss_pred -------------------------------------eeeeCcccccCCH----HHHhhhcccc--ceEeccChhhHHHH
Q 001960 705 -------------------------------------IAIEGPEFREKSD----EELSKLIPKI--QVMARSSPMDKHTL 741 (991)
Q Consensus 705 -------------------------------------~vi~g~~~~~~~~----~~~~~~~~~~--~v~ar~sP~~K~~~ 741 (991)
++++|+++..+.+ +++.++..++ .||||++|.||+++
T Consensus 783 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~I 862 (1178)
T PLN03190 783 CRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGI 862 (1178)
T ss_pred HHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHH
Confidence 4566666665544 3455555444 47999999999999
Q ss_pred HHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcH--HHHhhcCEEeccCCchHHHHH-HHHHHHHHHHHHHHHH
Q 001960 742 VKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE--VAKESADVIILDDNFSTIVTV-AKWGRSVYINIQKFVQ 818 (991)
Q Consensus 742 v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~--~ak~~ad~vl~~~~~~~i~~~-i~~gR~~~~~i~k~i~ 818 (991)
|+.+|++.+++|+|||||+||+|||++||||| |++|+| .|+.+||+++.+ |..+.++ +.|||+.|.|+.+.++
T Consensus 863 V~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~ 938 (1178)
T PLN03190 863 VALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMIL 938 (1178)
T ss_pred HHHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchhh--hHHHHHHHHHhCHHHHHHHHHHHH
Confidence 99999874589999999999999999999999 778999 599999999988 9999998 5799999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCC---ChhHHHHHHHHHHHhHHHHHHhcc--CCCCccccccCCC----CCCCCCcCHHH
Q 001960 819 FQLTVNVVALIVNFSSACLTGNA---PLTAVQLLWVNMIMDTLGALALAT--EPPNGDLMKRSPV----GRKGNFISNVM 889 (991)
Q Consensus 819 ~~l~~n~~~i~~~~~~~~~~~~~---pl~~~qll~~nli~d~l~~lal~~--e~~~~~l~~~~P~----~~~~~~~~~~~ 889 (991)
|.||+|++..+++|+++++++++ .++++.+.++|++++.+|.+++|. ++-+++.+.+.|. +++...++...
T Consensus 939 y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~ 1018 (1178)
T PLN03190 939 YNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKL 1018 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHH
Confidence 99999999999999999887765 468999999999999999999974 3334455555563 56677888888
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 001960 890 WRNILGQSLYQFLIIWYLQT 909 (991)
Q Consensus 890 ~~~i~~~~~~~~~~~~~l~~ 909 (991)
+..|++.++||++++|++.+
T Consensus 1019 F~~w~~~~i~qs~iiff~~~ 1038 (1178)
T PLN03190 1019 FWLTMIDTLWQSAVVFFVPL 1038 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 87888899999999887654
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-91 Score=828.14 Aligned_cols=547 Identities=24% Similarity=0.357 Sum_probs=440.6
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhhccc--CC-CCCcchhHHHHHHHHHHHHHHHHHH----HHHHHHHHHhhhhcCCcEEE
Q 001960 169 EALHDMTLMILAVCALVSLVVGIATE--GW-PKGAHDGLGIVMSILLVVFVTATSD----YKQSLQFKDLDREKKKITVQ 241 (991)
Q Consensus 169 ~~~~~~~~~illi~ai~s~~~~~~~~--~~-~~~~~d~~~i~~~lllvi~v~~~~~----~~~~~~~~~l~~~~~~~~v~ 241 (991)
.++++|..++++++++++++++.+.+ +. +..+++++.|++.+++.++++.+.+ ++.+++.+.|.+..++.+++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 35678999999999999999887633 11 1123556667666667766766664 33334445555544443565
Q ss_pred -EEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccCC---CCeEEeccEEecCeEE
Q 001960 242 -VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL---NPFLLSGTKVQNGSCK 317 (991)
Q Consensus 242 -V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~~---~~~l~sGt~v~~g~~~ 317 (991)
|.|||++++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.|+.|..+ ++ +|+||.|.+|+++
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~-V~aGT~v~~G~~~ 185 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDN-VIGGTSVASDWLE 185 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCe-eecCceeecceEE
Confidence 6799999999999999999999999999999999999975 9999999999999999876 55 9999999999999
Q ss_pred EEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHH
Q 001960 318 MLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEI 397 (991)
Q Consensus 318 ~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (991)
++|+++|.+|++|||.+++++++.++||+|..+..+...+.. .++++++++..+.. +. .+
T Consensus 186 i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i-----i~l~~~~~~~~~~~----------~~-----~~ 245 (673)
T PRK14010 186 VEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI-----IFLVVILTMYPLAK----------FL-----NF 245 (673)
T ss_pred EEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH-----HHHHHHHHHHHHHh----------hc-----cH
Confidence 999999999999999999999998899999776655433221 11222221110000 00 12
Q ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCee
Q 001960 398 LEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (991)
Q Consensus 398 ~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (991)
...+...+++++.+|||+||.+++++++.++++|.|+|+++|+++++|+||++|+||||||||||+|++.++++...+.
T Consensus 246 ~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~- 324 (673)
T PRK14010 246 NLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS- 324 (673)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC-
Confidence 2345677888888999999999999999999999999999999999999999999999999999997777666432111
Q ss_pred eeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEec
Q 001960 478 KEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEP 557 (991)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~p 557 (991)
....+++ .....|+.. +.||+++|+++++.+.+.+.... ..+.+|
T Consensus 325 -----------------~~~~~ll-~~a~~~~~~------------s~~P~~~AIv~~a~~~~~~~~~~-----~~~~~p 369 (673)
T PRK14010 325 -----------------SSFERLV-KAAYESSIA------------DDTPEGRSIVKLAYKQHIDLPQE-----VGEYIP 369 (673)
T ss_pred -----------------ccHHHHH-HHHHHhcCC------------CCChHHHHHHHHHHHcCCCchhh-----hcceec
Confidence 0112222 222223211 45999999999998777653321 123589
Q ss_pred CCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCC
Q 001960 558 FNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (991)
Q Consensus 558 F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~ 637 (991)
|++++|+|++.++ +. .+.||+++.+++.|+. +|...+. .+.+..++++++|+|+++++
T Consensus 370 F~~~~k~~gv~~~---g~--~i~kGa~~~il~~~~~----~g~~~~~------~~~~~~~~~a~~G~~~l~v~------- 427 (673)
T PRK14010 370 FTAETRMSGVKFT---TR--EVYKGAPNSMVKRVKE----AGGHIPV------DLDALVKGVSKKGGTPLVVL------- 427 (673)
T ss_pred cccccceeEEEEC---CE--EEEECCHHHHHHHhhh----cCCCCch------HHHHHHHHHHhCCCeEEEEE-------
Confidence 9999999998743 22 4569999999999984 2222221 25566778999999999875
Q ss_pred CCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCH
Q 001960 638 FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSD 717 (991)
Q Consensus 638 ~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~ 717 (991)
.|++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||..
T Consensus 428 ---------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~---------------- 482 (673)
T PRK14010 428 ---------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR---------------- 482 (673)
T ss_pred ---------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce----------------
Confidence 3578999999999999999999999999999999999999999999999999964
Q ss_pred HHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCch
Q 001960 718 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFS 797 (991)
Q Consensus 718 ~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~ 797 (991)
++||++|+||.++|+.+|++ |++|+|+|||+||+|||++|||||||| +|+|+||++||+|++||||.
T Consensus 483 -----------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls 549 (673)
T PRK14010 483 -----------FVAECKPEDKINVIREEQAK-GHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPT 549 (673)
T ss_pred -----------EEcCCCHHHHHHHHHHHHhC-CCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHH
Confidence 99999999999999999999 999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 798 TIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 833 (991)
Q Consensus 798 ~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~ 833 (991)
+|++++++||++|.|+++++.|.+..|+..++..+.
T Consensus 550 ~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~ 585 (673)
T PRK14010 550 KLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILP 585 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHH
Confidence 999999999999999999999999999987665554
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-90 Score=819.99 Aligned_cols=544 Identities=25% Similarity=0.349 Sum_probs=440.8
Q ss_pred HHHHhhHHHHHHHHHHHHHHHhhhcccC--CCCCcchhHHHHHHHH----HHHHHHHHHHHHHHHHHHHhhhhcCCcEEE
Q 001960 168 WEALHDMTLMILAVCALVSLVVGIATEG--WPKGAHDGLGIVMSIL----LVVFVTATSDYKQSLQFKDLDREKKKITVQ 241 (991)
Q Consensus 168 ~~~~~~~~~~illi~ai~s~~~~~~~~~--~~~~~~d~~~i~~~ll----lvi~v~~~~~~~~~~~~~~l~~~~~~~~v~ 241 (991)
..||++|..+++++++++++++++.... ....|.+++.+.+.++ +..++.+..+++.+++.+.|.+..++..++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 3478899999999999999998864320 0112223333333333 333444556666667777777655555799
Q ss_pred EEeCCe-EEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccCCC--CeEEeccEEecCeEEE
Q 001960 242 VARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALN--PFLLSGTKVQNGSCKM 318 (991)
Q Consensus 242 V~R~G~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~~~--~~l~sGt~v~~g~~~~ 318 (991)
|+|||+ +++|++++|+|||+|.+++||+|||||++++|. ..||||+|||||.|+.|..++ +.+|+||.|.+|++++
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~-a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV-ASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-EEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999988 899999999999999999999999999999997 599999999999999998653 3499999999999999
Q ss_pred EEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHH
Q 001960 319 LVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEIL 398 (991)
Q Consensus 319 ~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (991)
+|+++|.+|++|||.+++++++.++||+|..++.+...+..+.+++++..+. ..++. + . .
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~---~~~~~-----g-------~---~-- 246 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPP---FAAYS-----G-------G---A-- 246 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHH---HHHHh-----C-------c---h--
Confidence 9999999999999999999998889999988887765554332222111111 11110 0 0 1
Q ss_pred HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeee
Q 001960 399 EFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478 (991)
Q Consensus 399 ~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 478 (991)
..+..++++++++|||+|+.+.++....++++|.++|+++|+++++|+||++|+||||||||||+|+|++++++..+..
T Consensus 247 ~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~- 325 (679)
T PRK01122 247 LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV- 325 (679)
T ss_pred HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC-
Confidence 1467789999999999999999999999999999999999999999999999999999999999999999987643211
Q ss_pred eecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHH-cCCChHHHhhhcceEEEec
Q 001960 479 EVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLL-LGGDFQAERQASKIVKVEP 557 (991)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~-~g~~~~~~~~~~~il~~~p 557 (991)
++ +.+....+.++.+ +.||..+|+++++.+ .+.+.. +..++..+.+|
T Consensus 326 ---------------~~---~~ll~~a~~~s~~------------s~hP~~~AIv~~a~~~~~~~~~--~~~~~~~~~~p 373 (679)
T PRK01122 326 ---------------TE---EELADAAQLSSLA------------DETPEGRSIVVLAKQRFNLRER--DLQSLHATFVP 373 (679)
T ss_pred ---------------CH---HHHHHHHHHhcCC------------CCCchHHHHHHHHHhhcCCCch--hhccccceeEe
Confidence 11 1122333333221 348999999999976 343321 22355678899
Q ss_pred CCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCC
Q 001960 558 FNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (991)
Q Consensus 558 F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~ 637 (991)
|++.+|+|++.+. + +.+.||++|.+++.|+. +|... .+++.+.+++++++|+|++++|+
T Consensus 374 F~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~----~g~~~------~~~~~~~~~~~a~~G~~~l~va~------ 432 (679)
T PRK01122 374 FSAQTRMSGVDLD---G--REIRKGAVDAIRRYVES----NGGHF------PAELDAAVDEVARKGGTPLVVAE------ 432 (679)
T ss_pred ecCcCceEEEEEC---C--EEEEECCHHHHHHHHHh----cCCcC------hHHHHHHHHHHHhCCCcEEEEEE------
Confidence 9999998887542 2 47899999999999963 22221 14567778899999999999983
Q ss_pred CCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCH
Q 001960 638 FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSD 717 (991)
Q Consensus 638 ~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~ 717 (991)
|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||..
T Consensus 433 ----------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~---------------- 486 (679)
T PRK01122 433 ----------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD---------------- 486 (679)
T ss_pred ----------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE----------------
Confidence 578999999999999999999999999999999999999999999999999964
Q ss_pred HHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCch
Q 001960 718 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFS 797 (991)
Q Consensus 718 ~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~ 797 (991)
++||++|+||.++|+.+|++ |++|+|+|||+||+|||++|||||||| +|+|+||++||+|++||||.
T Consensus 487 -----------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s 553 (679)
T PRK01122 487 -----------FLAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPT 553 (679)
T ss_pred -----------EEccCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHH
Confidence 99999999999999999999 999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 798 TIVTVAKWGRSVYINIQKFVQFQLTVNVV 826 (991)
Q Consensus 798 ~i~~~i~~gR~~~~~i~k~i~~~l~~n~~ 826 (991)
+|++++++||+..-.--..-.|++. |-+
T Consensus 554 ~Iv~av~~GR~~~~tr~~~~~f~~~-n~~ 581 (679)
T PRK01122 554 KLIEVVEIGKQLLMTRGALTTFSIA-NDV 581 (679)
T ss_pred HHHHHHHHHHHHHhhhHhhhhhhHH-HHH
Confidence 9999999999999777777888876 544
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-94 Score=873.05 Aligned_cols=737 Identities=24% Similarity=0.340 Sum_probs=591.9
Q ss_pred HHHhcCCCcCCCCCCcc--HH-HHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 001960 146 RKEIYGINKFTESPARG--FW-VYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDY 222 (991)
Q Consensus 146 r~~~~G~N~~~~~~~~~--f~-~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~~~d~~~i~~~lllvi~v~~~~~~ 222 (991)
+...|-.|.+.+.++.. |+ +.+|+||++..|++|+++++++.++ +.+ +...+.++|+++|+.+++++|.
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~-------~~~~~~~~pl~~vl~~t~iKd~ 99 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSP-------FNPYTTLVPLLFVLGITAIKDA 99 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccc-------cCccceeeceeeeehHHHHHHH
Confidence 44589999998877644 33 7899999999999999999999998 542 2233456799999999999999
Q ss_pred HHHHHHHHhhhhcCCcEEEEEeCCe-EEEeecCCcccCcEEEeCCCCeecccEEEEeecc----eEEecccCCCCCccee
Q 001960 223 KQSLQFKDLDREKKKITVQVARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVN 297 (991)
Q Consensus 223 ~~~~~~~~l~~~~~~~~v~V~R~G~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~----l~VDeS~LTGES~pv~ 297 (991)
.|+.++++.|++.|+.++.|+|++. +.+..|++|+|||+|.+..++.+|||.+|++++. |+|++++|+||++.+.
T Consensus 100 ~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~ 179 (1151)
T KOG0206|consen 100 IEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKV 179 (1151)
T ss_pred HhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccce
Confidence 9999999999999999999999644 8999999999999999999999999999999875 9999999999999987
Q ss_pred cc----------------------------------------------CCCCeEEeccEEecC-eEEEEEEEEeccchhh
Q 001960 298 VN----------------------------------------------ALNPFLLSGTKVQNG-SCKMLVTTVGMRTQWG 330 (991)
Q Consensus 298 k~----------------------------------------------~~~~~l~sGt~v~~g-~~~~~V~~~G~~T~~g 330 (991)
|. ..++.+++|+++.+. .+.+.|+.+|.+|
T Consensus 180 k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dt--- 256 (1151)
T KOG0206|consen 180 KQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDT--- 256 (1151)
T ss_pred eeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcc---
Confidence 71 012357889999885 5899999999999
Q ss_pred HHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCC--CccccCCcC-hHHHHHHHHHHHHH
Q 001960 331 KLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEG--THWTWSGDD-ALEILEFFAIAVTI 407 (991)
Q Consensus 331 ~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~i~i 407 (991)
|++.+...++.+++++++.+|.....+..+.++++++..+.. .......... ..|+....+ .......|..++.+
T Consensus 257 K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il 334 (1151)
T KOG0206|consen 257 KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGF--AIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIIL 334 (1151)
T ss_pred hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhh--heeeeecccccCchhhhcCchHHHHHHHHHHHHHhh
Confidence 677777788899999999999876655544444333332221 1111111111 112222221 22345556777888
Q ss_pred HHHHcCCchHHHHHHHHHHHHHH------Hh----ccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCee
Q 001960 408 VVVAVPEGLPLAVTLSLAFAMKK------MM----NDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (991)
Q Consensus 408 lv~~vP~~L~lav~~~l~~~~~~------~~----~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (991)
+...+|.+|...+.+.-...+.- |. ...+.+|+.+..|+||++++|++|||||||+|.|++.+|.+.|..
T Consensus 335 ~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~ 414 (1151)
T KOG0206|consen 335 YQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTS 414 (1151)
T ss_pred hhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcc
Confidence 88999999999888877666532 33 347889999999999999999999999999999999999999887
Q ss_pred eeecCCCC-------C---------------CC------CCCCCChhHHHHHHHHHHhcCCCceeecCC--CceeecCCh
Q 001960 478 KEVDNSKG-------T---------------PA------FGSSIPASASKLLLQSIFNNTGGEVVIGEG--NKTEILGTP 527 (991)
Q Consensus 478 ~~~~~~~~-------~---------------~~------~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~--~~~~~~g~p 527 (991)
|+...... . ++ ..+....+....+..+++.||+...+.+++ ...+.+.||
T Consensus 415 yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SP 494 (1151)
T KOG0206|consen 415 YGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESP 494 (1151)
T ss_pred cccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCC
Confidence 76332110 0 00 000012233445667889999888777333 235668999
Q ss_pred hhHHHHHHHHHcCCChHHH------------hhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccc
Q 001960 528 TETAILEFGLLLGGDFQAE------------RQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFL 595 (991)
Q Consensus 528 ~e~All~~a~~~g~~~~~~------------~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~ 595 (991)
+|.|+++.|++.|+.+..+ ...++++++.||+|.|||||||++.|++++.+|||||+.+|++++..
T Consensus 495 DE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~-- 572 (1151)
T KOG0206|consen 495 DEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSK-- 572 (1151)
T ss_pred cHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhh--
Confidence 9999999999999876432 34899999999999999999999999999999999999999999874
Q ss_pred cCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCC---------------C-------CCCCCCCCCcEEEE
Q 001960 596 NSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF---------------S-------ADAPIPTEGYTCIG 653 (991)
Q Consensus 596 ~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~---------------~-------~~~~~~e~~l~~lG 653 (991)
-.+..++...+++++||.+||||||+|||+++++. . +..+.+|+||+++|
T Consensus 573 --------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLG 644 (1151)
T KOG0206|consen 573 --------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLG 644 (1151)
T ss_pred --------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhc
Confidence 22445667788999999999999999999998761 0 11256799999999
Q ss_pred EeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc-----------------------------
Q 001960 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------------- 704 (991)
Q Consensus 654 ~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~----------------------------- 704 (991)
.+++||+||+||+++|+.|++||||+||+|||+.+||.+||.+|++..++.
T Consensus 645 ATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~ 724 (1151)
T KOG0206|consen 645 ATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRK 724 (1151)
T ss_pred ceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999986532
Q ss_pred ------------------eeeeCcccccCCHHHHh----hhc--cccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCC
Q 001960 705 ------------------IAIEGPEFREKSDEELS----KLI--PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGT 760 (991)
Q Consensus 705 ------------------~vi~g~~~~~~~~~~~~----~~~--~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ 760 (991)
++|+|+.+....+.+.+ ++. ++..+|||++|.||+.+|+..++..+.++++||||+
T Consensus 725 ~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGA 804 (1151)
T KOG0206|consen 725 FTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGA 804 (1151)
T ss_pred hhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCC
Confidence 34445444332222122 222 566799999999999999999877789999999999
Q ss_pred CChHhhhhCCeeEEecCCCcHH--HHhhcCEEeccCCchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001960 761 NDAPALHEADIGLAMGIAGTEV--AKESADVIILDDNFSTIVTV-AKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACL 837 (991)
Q Consensus 761 ND~~al~~Advgiamg~~g~~~--ak~~ad~vl~~~~~~~i~~~-i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~ 837 (991)
||++|+++||||| ||+|.|+ |..+||+.+.+ |.-+.++ +.|||+.|.|+.+++.|.+|+|+...++.|++.++
T Consensus 805 NDVsMIQ~AhVGV--GIsG~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~ 880 (1151)
T KOG0206|consen 805 NDVSMIQEAHVGV--GISGQEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFF 880 (1151)
T ss_pred ccchheeeCCcCe--eeccchhhhhhhcccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999 6677776 88999999998 7777776 79999999999999999999999999999999987
Q ss_pred cC---CCChhHHHHHHHHHHHhHHHHHHhcc--CCCCccccccCCC----CCCCCCcCHHHHHHHHHHHHHHHHHHHHHH
Q 001960 838 TG---NAPLTAVQLLWVNMIMDTLGALALAT--EPPNGDLMKRSPV----GRKGNFISNVMWRNILGQSLYQFLIIWYLQ 908 (991)
Q Consensus 838 ~~---~~pl~~~qll~~nli~d~l~~lal~~--e~~~~~l~~~~P~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 908 (991)
+| +..++.+++.++|++++.+|.+++|. .+.+++.+.+.|. +++..++++..++.|+..++||++++|++.
T Consensus 881 ~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~ 960 (1151)
T KOG0206|consen 881 NGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLP 960 (1151)
T ss_pred CCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeee
Confidence 66 45789999999999999999999985 4566666667774 666678888888888889999999988765
Q ss_pred H
Q 001960 909 T 909 (991)
Q Consensus 909 ~ 909 (991)
+
T Consensus 961 ~ 961 (1151)
T KOG0206|consen 961 Y 961 (1151)
T ss_pred H
Confidence 4
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-88 Score=780.84 Aligned_cols=754 Identities=22% Similarity=0.317 Sum_probs=567.4
Q ss_pred cCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHH
Q 001960 132 ITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSIL 211 (991)
Q Consensus 132 ~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~~~d~~~i~~~ll 211 (991)
...||+..+ +.+|+..||+|.+.. +.++.+.++.++.-+|+..+. ++|+++|...+ .+|.+..|++.-+
T Consensus 157 ~~~gL~~~~--~~~r~~iyG~N~i~l-~ik~i~~iLv~EvL~PfYlFQ----~fSv~lW~~d~----Y~~YA~cI~iisv 225 (1140)
T KOG0208|consen 157 VSNGLERQE--IIDRRIIYGRNVISL-PIKSISQILVKEVLNPFYLFQ----AFSVALWLADS----YYYYAFCIVIISV 225 (1140)
T ss_pred ccCCccHHH--HHhHHhhcCCceeee-ecccHHHHHHHhccchHHHHH----hHHhhhhhccc----chhhhhHHHHHHH
Confidence 357898876 899999999999865 467899999999988887665 44455554432 3334444443333
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCC-CCeecccEEEEeecceEEecccCC
Q 001960 212 LVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCM-GDQVPADGLFVSGFSVLINESSLT 290 (991)
Q Consensus 212 lvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~-Gd~VPaDgill~g~~l~VDeS~LT 290 (991)
.-++++....-.++++.+++-+ ....|+|+|||.+++|.++|||||||+.+.+ |-..|||++|++|+ |.||||+||
T Consensus 226 ~Si~~sv~e~r~qs~rlr~mv~--~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~-civNEsmLT 302 (1140)
T KOG0208|consen 226 YSIVLSVYETRKQSIRLRSMVK--FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD-CIVNESMLT 302 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc--CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCc-EEeeccccc
Confidence 3333333333334444444432 3358999999999999999999999999998 99999999999996 899999999
Q ss_pred CCCcceeccC------------------CCCeEEeccEEec------CeEEEEEEEEeccchhhHHHhhhcCCCCCCChh
Q 001960 291 GESEPVNVNA------------------LNPFLLSGTKVQN------GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPL 346 (991)
Q Consensus 291 GES~pv~k~~------------------~~~~l~sGt~v~~------g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~l 346 (991)
|||.|+.|.+ ..+++|+||++.+ +.+.+.|++||.+|..|++.+++..++..
T Consensus 303 GESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~---- 378 (1140)
T KOG0208|consen 303 GESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPV---- 378 (1140)
T ss_pred CCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCc----
Confidence 9999999952 2357999999974 67899999999999999999999887543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Q 001960 347 QVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAF 426 (991)
Q Consensus 347 q~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~ 426 (991)
..++-+-+..+.....++|++.|+...+.+.... . .+-..++.++.++.+.+|++||.+.++...+
T Consensus 379 ~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~g-----------~---~~~~iiirsLDliTi~VPPALPAaltvG~~~ 444 (1140)
T KOG0208|consen 379 NFKFYRDSFKFILFLVIIALIGFIYTAIVLNLLG-----------V---PLKTIIIRSLDLITIVVPPALPAALTVGIIY 444 (1140)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHcC-----------C---CHHHHhhhhhcEEEEecCCCchhhhhHHHHH
Confidence 3333233333333334444455544333322211 1 2446678889999999999999999999999
Q ss_pred HHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCee-eeec--CCC--CC----CCCCCCCChhH
Q 001960 427 AMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI-KEVD--NSK--GT----PAFGSSIPASA 497 (991)
Q Consensus 427 ~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~-~~~~--~~~--~~----~~~~~~~~~~~ 497 (991)
+.+|+.|+||.|-+++.+...|+++++|||||||||++.+.+..+..-... ...+ ... .. .....+.....
T Consensus 445 a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 524 (1140)
T KOG0208|consen 445 AQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLP 524 (1140)
T ss_pred HHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCc
Confidence 999999999999999999999999999999999999999999887763221 0000 000 00 00000000111
Q ss_pred HHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHH-c------CCCh------------------HHHh----h
Q 001960 498 SKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLL-L------GGDF------------------QAER----Q 548 (991)
Q Consensus 498 ~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~-~------g~~~------------------~~~~----~ 548 (991)
...+..+++.||+.....+ ...|+|.|.-+.+...- . +... .... .
T Consensus 525 ~~~~~~a~atCHSL~~v~g-----~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~ 599 (1140)
T KOG0208|consen 525 MGNLVAAMATCHSLTLVDG-----TLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEG 599 (1140)
T ss_pred hHHHHHHHhhhceeEEeCC-----eeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCc
Confidence 2345677888885443322 34677777666543210 0 0000 0000 1
Q ss_pred hcceEEEecCCCCCceEEEEEEeCC-CeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHccccee
Q 001960 549 ASKIVKVEPFNSVKKQMGVVIELPE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTL 627 (991)
Q Consensus 549 ~~~il~~~pF~s~~k~msviv~~~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l 627 (991)
.+.+++.+||+|..+||||++..++ ....+|+|||||.|.+.|+. +.+ .+.+++.++.|+.+|+|++
T Consensus 600 ~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p------~tv------P~dy~evl~~Yt~~GfRVI 667 (1140)
T KOG0208|consen 600 EISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP------ETV------PADYQEVLKEYTHQGFRVI 667 (1140)
T ss_pred ceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc------ccC------CccHHHHHHHHHhCCeEEE
Confidence 4779999999999999999999763 67899999999999999974 222 2458899999999999999
Q ss_pred eeeEEecCCC-----CCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC
Q 001960 628 CLACMEIGNE-----FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD 702 (991)
Q Consensus 628 ~~A~~~l~~~-----~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~ 702 (991)
|+|+|.++.. ....++..|.|++|+|++.+|+++|++++.+|++|++|+||++|+||||..||..+||+||++.+
T Consensus 668 AlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p 747 (1140)
T KOG0208|consen 668 ALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEP 747 (1140)
T ss_pred EEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCC
Confidence 9999999876 12356788999999999999999999999999999999999999999999999999999999865
Q ss_pred Cc-------------------------------------------------------eeeeCcccccC---CHHHHhhhc
Q 001960 703 NG-------------------------------------------------------IAIEGPEFREK---SDEELSKLI 724 (991)
Q Consensus 703 ~~-------------------------------------------------------~vi~g~~~~~~---~~~~~~~~~ 724 (991)
.. .+++|+.|+-+ ..+.+.+++
T Consensus 748 ~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il 827 (1140)
T KOG0208|consen 748 QVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKIL 827 (1140)
T ss_pred CCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHH
Confidence 32 45556655433 356777888
Q ss_pred cccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 725 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 725 ~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
.+..||||++|.||.++|+.||+. |..|+|+|||+||+.|||+||+||+++.+ .|.-+|.+.-.-.+.+.+.++|+
T Consensus 828 ~~~~VfARMsP~qK~~Lie~lQkl-~y~VgfCGDGANDCgALKaAdvGISLSea---EASvAApFTSk~~~I~cVp~vIr 903 (1140)
T KOG0208|consen 828 LKGTVFARMSPDQKAELIEALQKL-GYKVGFCGDGANDCGALKAADVGISLSEA---EASVAAPFTSKTPSISCVPDVIR 903 (1140)
T ss_pred hcCeEEeecCchhHHHHHHHHHhc-CcEEEecCCCcchhhhhhhcccCcchhhh---hHhhcCccccCCCchhhHhHHHh
Confidence 899999999999999999999988 99999999999999999999999998732 35566888887778999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCC
Q 001960 805 WGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNF 884 (991)
Q Consensus 805 ~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~ 884 (991)
+||+....--..++|...|.++..+..+ .++....-++..|.++++++..++-+++++..+|..++-..|| +..+
T Consensus 904 EGRaALVTSf~~FkYMalYs~iqFisv~--~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP---~~~L 978 (1140)
T KOG0208|consen 904 EGRAALVTSFACFKYMALYSAIQFISVV--FLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRP---PTNL 978 (1140)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHhhh--eeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCC---Cccc
Confidence 9999999999999999888776544333 2345567899999999999999999999999999999988888 5678
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhcc--cccccCCC----CcccchhHHHHHHHHHHHHHHHH
Q 001960 885 ISNVMWRNILGQSLYQFLIIWYLQTRGK--AVFRLDGP----DPDLILNTLIFNTFVFCQLQRDG 943 (991)
Q Consensus 885 ~~~~~~~~i~~~~~~~~~~~~~l~~~~~--~~~~~~~~----~~~~~~~t~~f~~~v~~q~~n~~ 943 (991)
+++..+...++|.++..++.+...+.+. +|+....+ +-.....|.+|..--|.-+|+.+
T Consensus 979 ~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~~~nt~s~~~T~lF~vS~fqYi~~a~ 1043 (1140)
T KOG0208|consen 979 LSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQVDDNTQSSDNTSLFFVSSFQYIFIAL 1043 (1140)
T ss_pred cccchhhhhHHHHHHHHHHHHhhheeeccccceecCCCCcCcccccceeeEeeehhHHHHHHhhe
Confidence 9998888888888877777776665443 34432111 11233467777666565556553
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-86 Score=782.51 Aligned_cols=546 Identities=26% Similarity=0.368 Sum_probs=447.1
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhhcc--cC---CCCCcchhH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEE
Q 001960 169 EALHDMTLMILAVCALVSLVVGIAT--EG---WPKGAHDGL---GIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240 (991)
Q Consensus 169 ~~~~~~~~~illi~ai~s~~~~~~~--~~---~~~~~~d~~---~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v 240 (991)
.||+||..+++++++++++++++.. .+ ...+||++. .+++.+++..++.+..+++.+++.++|.+..++..+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 4688999999999999999987642 11 113588753 233344555566667788888888888876656578
Q ss_pred EEEe-CCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccCCCC--eEEeccEEecCeEE
Q 001960 241 QVAR-NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNP--FLLSGTKVQNGSCK 317 (991)
Q Consensus 241 ~V~R-~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~~~~--~l~sGt~v~~g~~~ 317 (991)
+|+| ||++++|++++|+|||+|.+++||+|||||++++|+ +.||||+|||||.|+.|..++. .+++||.|.+|+++
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8886 899999999999999999999999999999999996 6999999999999999987653 49999999999999
Q ss_pred EEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHH
Q 001960 318 MLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEI 397 (991)
Q Consensus 318 ~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (991)
++|+++|.+|++|||.+++++++.++||+|..++.+...+..+.++ +++.++.... |.+. .
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li---~~~~~~~~~~------------~~~~---~- 247 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLL---VTATLWPFAA------------YGGN---A- 247 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH---HHHHHHHHHH------------hcCh---h-
Confidence 9999999999999999999999888999998888776544322221 1122221110 1110 1
Q ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCee
Q 001960 398 LEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (991)
Q Consensus 398 ~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (991)
..+..++++++++|||+|+...+.....++++|.++|+++|+++++|+||++|+||||||||||+|+|++++++..+..
T Consensus 248 -~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~ 326 (675)
T TIGR01497 248 -ISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV 326 (675)
T ss_pred -HHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC
Confidence 1356678899999999888888877778999999999999999999999999999999999999999999987743211
Q ss_pred eeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEec
Q 001960 478 KEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEP 557 (991)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~p 557 (991)
+ ..+ +....+.++. .+.||.++|+++++.+.|.+... ..++..+..|
T Consensus 327 ----------------~--~~~-ll~~aa~~~~------------~s~hP~a~Aiv~~a~~~~~~~~~--~~~~~~~~~p 373 (675)
T TIGR01497 327 ----------------D--EKT-LADAAQLASL------------ADDTPEGKSIVILAKQLGIREDD--VQSLHATFVE 373 (675)
T ss_pred ----------------c--HHH-HHHHHHHhcC------------CCCCcHHHHHHHHHHHcCCCccc--cccccceEEE
Confidence 0 111 2233333321 14689999999999887764332 1234567899
Q ss_pred CCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCC
Q 001960 558 FNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (991)
Q Consensus 558 F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~ 637 (991)
|++.+|+|++.+. ++ +.++||++|.+++.|+. +|...+ ..+.+.+++++++|+|++++|+
T Consensus 374 f~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~----~g~~~~------~~~~~~~~~~a~~G~r~l~va~------ 433 (675)
T TIGR01497 374 FTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEA----NGGHIP------TDLDQAVDQVARQGGTPLVVCE------ 433 (675)
T ss_pred EcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHh----cCCCCc------HHHHHHHHHHHhCCCeEEEEEE------
Confidence 9999888877543 23 46899999999988852 222211 3467778899999999999995
Q ss_pred CCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCH
Q 001960 638 FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSD 717 (991)
Q Consensus 638 ~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~ 717 (991)
+.+++|+++++||+|||++++|++|+++|++++|+|||+..+|.++|+++||..
T Consensus 434 ----------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~---------------- 487 (675)
T TIGR01497 434 ----------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD---------------- 487 (675)
T ss_pred ----------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----------------
Confidence 358999999999999999999999999999999999999999999999999964
Q ss_pred HHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCch
Q 001960 718 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFS 797 (991)
Q Consensus 718 ~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~ 797 (991)
+++|++|+||.++|+.+|++ |+.|+|+|||.||+|||++|||||||| +|+++|+++||++++||||.
T Consensus 488 -----------v~a~~~PedK~~~v~~lq~~-g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s 554 (675)
T TIGR01497 488 -----------FIAEATPEDKIALIRQEQAE-GKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPT 554 (675)
T ss_pred -----------EEcCCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHH
Confidence 89999999999999999998 999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 798 TIVTVAKWGRSVYINIQKFVQFQLTVNVVA 827 (991)
Q Consensus 798 ~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~ 827 (991)
+++++++|||+++.+......|++.-+++-
T Consensus 555 ~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~ 584 (675)
T TIGR01497 555 KLIEVVHIGKQLLITRGALTTFSIANDVAK 584 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeecccHHH
Confidence 999999999999999999999999877753
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-87 Score=794.67 Aligned_cols=651 Identities=26% Similarity=0.333 Sum_probs=493.4
Q ss_pred hccchhhhHHHHHhhhhhhhHHHHhhhhhhhhhhcccCCCC-ccccccccccCCcccChhhhhhhhccCCh---HHHHhh
Q 001960 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSS-EYTVPEEVAASGFQICPDELGSIVEGHDI---KKLKVH 118 (991)
Q Consensus 43 ~~l~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~l~~~ 118 (991)
+.+..+.| ++++.+++++++||+.++++.+.|++. ... ..++...++..||............+.+. +.+.+.
T Consensus 14 a~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~--~~~~~~~~~~~v~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (713)
T COG2217 14 AACASRIE-ALNKLPGVEEARVNLATERATVVYDPE--EVDLPADIVAAVEKAGYSARLTAALADPAEAEARLLRELLRR 90 (713)
T ss_pred HHHHHHHH-HHhcCCCeeEEEeecccceEEEEeccc--ccccHHHHHHHHHhcCccccccccccchhhhhhhhhhhHHHH
Confidence 35667778 899999999999999999999999865 223 56788888999998765111111111000 111221
Q ss_pred CCHHHHHH----HhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHH--HH-HHHHHHHHhhh
Q 001960 119 GGVEGIAE----KLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMI--LA-VCALVSLVVGI 191 (991)
Q Consensus 119 ~~v~~~~~----~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~i--ll-i~ai~s~~~~~ 191 (991)
..+.++.. .+......|. . ........-.-......+.+|++..|+.+++....+ |+ ++++.+++++.
T Consensus 91 ~~i~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~~~~md~Lv~la~~~A~~~s~ 165 (713)
T COG2217 91 LIIAGLLTLPLLLLSLGLLLGA--F---LLPWVSFLLATPVLFYGGWPFYRGAWRALRRGRLNMDTLVALATIGAYAYSL 165 (713)
T ss_pred HHHHHHHHHHHHHHHHHhhcch--h---hHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 12333222 1111111111 0 111100000000001247788889999998764443 22 22223334443
Q ss_pred cccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------hcCCcEEEEEe-CCeEEEeecCCcccCcEEEe
Q 001960 192 ATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKITVQVAR-NGFRRKISIYDLLPGDIVHL 264 (991)
Q Consensus 192 ~~~~~~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~------~~~~~~v~V~R-~G~~~~I~~~dLvvGDIV~l 264 (991)
+..-++ .||+..++++.+++ +++|.|++.+.+..+ ...+..+++++ ||+.++|+++||+|||+|.|
T Consensus 166 ~~~~~~-~yf~~aa~ii~l~~------~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~V 238 (713)
T COG2217 166 YATLFP-VYFEEAAMLIFLFL------LGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLV 238 (713)
T ss_pred HHHhhh-hHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEE
Confidence 311111 56666655544444 377777776655332 34677887776 56699999999999999999
Q ss_pred CCCCeecccEEEEeecceEEecccCCCCCcceeccCCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCC
Q 001960 265 CMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDET 344 (991)
Q Consensus 265 ~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t 344 (991)
+|||+||+||++++|++ .||||+|||||.|+.|.+++. +++||.+.+|..++.|+++|.+|.+++|.+++++++..++
T Consensus 239 rpGE~IPvDG~V~~G~s-~vDeS~iTGEs~PV~k~~Gd~-V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka 316 (713)
T COG2217 239 RPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKKPGDE-VFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKA 316 (713)
T ss_pred CCCCEecCCeEEEeCcE-EeecchhhCCCCCEecCCCCE-EeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCc
Confidence 99999999999999997 999999999999999998886 9999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Q 001960 345 PLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSL 424 (991)
Q Consensus 345 ~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l 424 (991)
|.|+..|+++.++++..+++++++|++|.+.. + + .+...+..++++++++|||+|.+++|+++
T Consensus 317 ~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~-------~--~--------~~~~a~~~a~avLVIaCPCALgLAtP~ai 379 (713)
T COG2217 317 PIQRLADRVASYFVPVVLVIAALTFALWPLFG-------G--G--------DWETALYRALAVLVIACPCALGLATPTAI 379 (713)
T ss_pred hHHHHHHHHHHccHHHHHHHHHHHHHHHHHhc-------C--C--------cHHHHHHHHHhheeeeCccHHHhHHHHHH
Confidence 99999999999999999999999988654211 0 0 24467889999999999999999999999
Q ss_pred HHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHH
Q 001960 425 AFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQS 504 (991)
Q Consensus 425 ~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 504 (991)
..++.+..++|+|+|+.+++|+++++|+++||||||||+|+|+|+++...+. + .++.+++.
T Consensus 380 ~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~--------------e~~~L~la--- 440 (713)
T COG2217 380 LVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--D--------------EDELLALA--- 440 (713)
T ss_pred HHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--C--------------HHHHHHHH---
Confidence 9999999999999999999999999999999999999999999999876432 0 12333332
Q ss_pred HHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCch
Q 001960 505 IFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGAS 584 (991)
Q Consensus 505 i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~ 584 (991)
+.++ ..+.||..+|+++++...+.... +..+.+| -.++.-+.++.. +.-|.+
T Consensus 441 ------AalE-------~~S~HPiA~AIv~~a~~~~~~~~------~~~~~i~------G~Gv~~~v~g~~---v~vG~~ 492 (713)
T COG2217 441 ------AALE-------QHSEHPLAKAIVKAAAERGLPDV------EDFEEIP------GRGVEAEVDGER---VLVGNA 492 (713)
T ss_pred ------HHHH-------hcCCChHHHHHHHHHHhcCCCCc------cceeeec------cCcEEEEECCEE---EEEcCH
Confidence 1122 23789999999999887662110 0011111 123322333322 333776
Q ss_pred HHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCccc
Q 001960 585 EIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG 664 (991)
Q Consensus 585 e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~ 664 (991)
..+.+. +.. .+. ..+..+.+..+|..++.++ .|.+++|+++++|++||+
T Consensus 493 ~~~~~~--------~~~--~~~-----~~~~~~~~~~~G~t~v~va----------------~dg~~~g~i~~~D~~R~~ 541 (713)
T COG2217 493 RLLGEE--------GID--LPL-----LSERIEALESEGKTVVFVA----------------VDGKLVGVIALADELRPD 541 (713)
T ss_pred HHHhhc--------CCC--ccc-----hhhhHHHHHhcCCeEEEEE----------------ECCEEEEEEEEeCCCChh
Confidence 654321 111 110 3445667788888777776 355899999999999999
Q ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHH
Q 001960 665 VKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 744 (991)
Q Consensus 665 v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~ 744 (991)
++++|++||+.|+++.|+||||..+|.++|+++||.. ++|.+.|+||.++|+.
T Consensus 542 a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~---------------------------v~AellPedK~~~V~~ 594 (713)
T COG2217 542 AKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE---------------------------VRAELLPEDKAEIVRE 594 (713)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh---------------------------heccCCcHHHHHHHHH
Confidence 9999999999999999999999999999999999964 9999999999999999
Q ss_pred HHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 745 LRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVN 824 (991)
Q Consensus 745 l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n 824 (991)
||++ |++|+|+|||+||+|||++|||||||| +|+|+|+++||+++++||+..++++++.+|+++++|++|+.|++.||
T Consensus 595 l~~~-g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn 672 (713)
T COG2217 595 LQAE-GRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYN 672 (713)
T ss_pred HHhc-CCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 999999999999999999999999999 79999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 001960 825 VVALIVNFSS 834 (991)
Q Consensus 825 ~~~i~~~~~~ 834 (991)
+++++++..+
T Consensus 673 ~~~iplA~~g 682 (713)
T COG2217 673 AIAIPLAAGG 682 (713)
T ss_pred HHHHHHHHHh
Confidence 9999988864
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-86 Score=734.23 Aligned_cols=749 Identities=22% Similarity=0.291 Sum_probs=579.1
Q ss_pred HHHHhcCCCcCCCCCCc--cHH-HHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 001960 145 RRKEIYGINKFTESPAR--GFW-VYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSD 221 (991)
Q Consensus 145 ~r~~~~G~N~~~~~~~~--~f~-~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~~~d~~~i~~~lllvi~v~~~~~ 221 (991)
.++++|-+|.+...+++ +|. ..+++||+-+.+.++++.+..++++.+.. | + ..+...|+.++.+++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~i-g----~--l~ty~~pl~fvl~itl~ke 146 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKI-G----Y--LSTYWGPLGFVLTITLIKE 146 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchhee-c----c--hhhhhHHHHHHHHHHHHHH
Confidence 34578888888766543 333 67899999999999999999999887643 2 2 2344567888889999999
Q ss_pred HHHHHHHHHhhhhcCCcEEEEE-eCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeec----ceEEecccCCCCCcce
Q 001960 222 YKQSLQFKDLDREKKKITVQVA-RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGF----SVLINESSLTGESEPV 296 (991)
Q Consensus 222 ~~~~~~~~~l~~~~~~~~v~V~-R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~----~l~VDeS~LTGES~pv 296 (991)
..++.++++-+++.|+...+++ |+|...+ ++++|+|||+|.++.+++||||.+++.++ +|.|.+..|+||++++
T Consensus 147 avdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWK 225 (1051)
T KOG0210|consen 147 AVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWK 225 (1051)
T ss_pred HHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccce
Confidence 9999999999988888887777 6776555 99999999999999999999999999876 3899999999999987
Q ss_pred ecc----------------------------------------------CCCCeEEeccEEecCeEEEEEEEEeccchhh
Q 001960 297 NVN----------------------------------------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWG 330 (991)
Q Consensus 297 ~k~----------------------------------------------~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g 330 (991)
.|- .-++.++++|.+.+|.+.++|++||.+|
T Consensus 226 Lrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dt--- 302 (1051)
T KOG0210|consen 226 LRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDT--- 302 (1051)
T ss_pred eeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccH---
Confidence 760 1145799999999999999999999999
Q ss_pred HHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHH
Q 001960 331 KLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVV 410 (991)
Q Consensus 331 ~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~ 410 (991)
+-+.+...++.+-.-++..+|.+.+++..+.++++++.... .|... .|...+..++.++..
T Consensus 303 RsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~-----------~g~~~--------~wyi~~~RfllLFS~ 363 (1051)
T KOG0210|consen 303 RSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAM-----------KGFGS--------DWYIYIIRFLLLFSS 363 (1051)
T ss_pred HHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHh-----------hcCCC--------chHHHHHHHHHHHhh
Confidence 55556667777777888899999988877666655443321 01101 233456666777778
Q ss_pred HcCCchHHHHHHHHHHHHHHHhcc----ccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCC---
Q 001960 411 AVPEGLPLAVTLSLAFAMKKMMND----KALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNS--- 483 (991)
Q Consensus 411 ~vP~~L~lav~~~l~~~~~~~~~~----~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~--- 483 (991)
.+|.+|-..+.++...-.+.+.+| |.+||+.+..|+||++.++.+|||||||+|+|.+++++.+.-.|..+..
T Consensus 364 IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV 443 (1051)
T KOG0210|consen 364 IIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEV 443 (1051)
T ss_pred hceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHH
Confidence 899999999999988888888776 6779999999999999999999999999999999999987544432110
Q ss_pred ------------CCC----CCCCCCCChhHHHHHHHHHHhcCCCceeecCCC-ceeecCChhhHHHHHHHHHcCCChHHH
Q 001960 484 ------------KGT----PAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN-KTEILGTPTETAILEFGLLLGGDFQAE 546 (991)
Q Consensus 484 ------------~~~----~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~-~~~~~g~p~e~All~~a~~~g~~~~~~ 546 (991)
... .......+..+ .-+.++++.||+..+..+++| ..++..||+|.|+++|....|.....+
T Consensus 444 ~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv-~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~R 522 (1051)
T KOG0210|consen 444 SQHIQSLYTPGRNKGKGALSRVKKDMSARV-RNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKR 522 (1051)
T ss_pred HHHHHHhhCCCcccccccchhhcCcccHHH-HHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeec
Confidence 000 00011122222 334578889999888887765 456699999999999998888764332
Q ss_pred -------------hhhcceEEEecCCCCCceEEEEEEeC-CCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHH
Q 001960 547 -------------RQASKIVKVEPFNSVKKQMGVVIELP-EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHL 612 (991)
Q Consensus 547 -------------~~~~~il~~~pF~s~~k~msviv~~~-~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~ 612 (991)
..+|+|+++|||+|+.|||+++|+.+ .+++..|.|||+.++-...+. -+++
T Consensus 523 d~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~---------------NdWl 587 (1051)
T KOG0210|consen 523 DRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY---------------NDWL 587 (1051)
T ss_pred ccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc---------------chhh
Confidence 13799999999999999999999976 588999999998877554321 2457
Q ss_pred HHHHHHHHHcccceeeeeEEecCCCCCC--------------C---------CCCCCCCcEEEEEeeccCCCcccHHHHH
Q 001960 613 NETIEKFASEALRTLCLACMEIGNEFSA--------------D---------APIPTEGYTCIGIVGIKDPMRPGVKESV 669 (991)
Q Consensus 613 ~~~~~~~a~~glR~l~~A~~~l~~~~~~--------------~---------~~~~e~~l~~lG~~~i~D~lr~~v~~~I 669 (991)
++...+||.+|+||+.+|.|.++++..+ + +..+|+|+.++|++|+||+++++|+.++
T Consensus 588 eEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tL 667 (1051)
T KOG0210|consen 588 EEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTL 667 (1051)
T ss_pred hhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHH
Confidence 7788999999999999999999865100 0 1256899999999999999999999999
Q ss_pred HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----------------------------eeeeCcccccC---CHH
Q 001960 670 AICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------------IAIEGPEFREK---SDE 718 (991)
Q Consensus 670 ~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~----------------------------~vi~g~~~~~~---~~~ 718 (991)
+.||+|||++||+|||+.+||..||+..++...++ ++|+|+.+.-. -++
T Consensus 668 ElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~ 747 (1051)
T KOG0210|consen 668 ELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYED 747 (1051)
T ss_pred HHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHH
Confidence 99999999999999999999999999999986432 67888776543 245
Q ss_pred HHhhhcc--ccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHH--HHhhcCEEeccC
Q 001960 719 ELSKLIP--KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV--AKESADVIILDD 794 (991)
Q Consensus 719 ~~~~~~~--~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~--ak~~ad~vl~~~ 794 (991)
|+.++.+ ..+|+|||+|.||+++++.+|++.|+.|+++|||.||++|+++||+|| ||-|.|+ |.-+||+.+.+
T Consensus 748 Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~Gi--GI~gkEGkQASLAADfSItq- 824 (1051)
T KOG0210|consen 748 EFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGI--GIVGKEGKQASLAADFSITQ- 824 (1051)
T ss_pred HHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccce--eeecccccccchhccccHHH-
Confidence 5666553 456999999999999999999998999999999999999999999999 6667775 77889999988
Q ss_pred CchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHH---HHHHHHHHhHHHHHHhccCC-CC
Q 001960 795 NFSTIVTV-AKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQ---LLWVNMIMDTLGALALATEP-PN 869 (991)
Q Consensus 795 ~~~~i~~~-i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~q---ll~~nli~d~l~~lal~~e~-~~ 869 (991)
|..+.++ +-|||+.|+|..+.-||.+.+.++..+++.+++..+.+.|..-.| |..+..+++++|.+++..+. .+
T Consensus 825 -F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~ 903 (1051)
T KOG0210|consen 825 -FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVS 903 (1051)
T ss_pred -HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeeccccc
Confidence 9999998 467999999999999999999999999998888777776655544 56688899999999998743 44
Q ss_pred ccccccCCC----CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccchhHHHHHHHHHHHH-HHHHh
Q 001960 870 GDLMKRSPV----GRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQL-QRDGK 944 (991)
Q Consensus 870 ~~l~~~~P~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~-~n~~~ 944 (991)
+++-...|. -.+...++.+.+..|...++||+.++.+..+. +|.-+ .....++.|.++++-.+ +-++.
T Consensus 904 ~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~---l~~~e----f~~ivaisFtaLi~tELiMVaLt 976 (1051)
T KOG0210|consen 904 ESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALL---LFDTE----FIHIVAISFTALILTELIMVALT 976 (1051)
T ss_pred HHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHH---Hhhhh----heEeeeeeeHHHHHHHHHHHhhh
Confidence 444444442 12234455566666777899999987663221 11110 11234566666665433 23344
Q ss_pred hccccc
Q 001960 945 DKRLQG 950 (991)
Q Consensus 945 ~r~~~~ 950 (991)
.|+++.
T Consensus 977 v~tw~~ 982 (1051)
T KOG0210|consen 977 VRTWHW 982 (1051)
T ss_pred hhhhhH
Confidence 555543
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-82 Score=698.02 Aligned_cols=634 Identities=24% Similarity=0.387 Sum_probs=509.5
Q ss_pred hhCCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCC
Q 001960 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGW 196 (991)
Q Consensus 117 ~~~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~ 196 (991)
..+.++.+.+.|...-. ||+++| +++|++.||.|++.+++...|.+|+ .-|.+|.-|..-.+|++...+.-- .|.
T Consensus 19 ~~~p~eeVfeeL~~t~~-GLt~~E--~~eRlk~fG~NkleEkken~~lKFl-~Fm~~PlswVMEaAAimA~~Lang-~~~ 93 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCTRE-GLTSDE--VEERLKIFGPNKLEEKKESKFLKFL-GFMWNPLSWVMEAAAIMAIGLANG-GGR 93 (942)
T ss_pred ccCchhhhHHHHhcCCC-CCchHH--HHHHHHhhCchhhhhhhhhHHHHHH-HHHhchHHHHHHHHHHHHHHHhcC-CCC
Confidence 45678888887776654 999988 9999999999999887766666654 345677778878888877655421 244
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEE
Q 001960 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLF 276 (991)
Q Consensus 197 ~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgil 276 (991)
+..|.|...|...+++...++.+.++..-.....|.+...+ +..|+|||+|.++.+.+||||||+.++.||+|||||+|
T Consensus 94 ~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~-KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRL 172 (942)
T KOG0205|consen 94 PPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAP-KAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARL 172 (942)
T ss_pred CcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCc-ccEEeecCeeeeeeccccccCceeeeccCCEecCccce
Confidence 66899988887777777777777787777777777765544 78999999999999999999999999999999999999
Q ss_pred EeecceEEecccCCCCCcceeccCCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHH
Q 001960 277 VSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATI 356 (991)
Q Consensus 277 l~g~~l~VDeS~LTGES~pv~k~~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~ 356 (991)
++|+-+.||+|.|||||.|+.|.+++. +||||.+.+|++.++|++||.+|..||-..++.. ......+|+-++.+.++
T Consensus 173 l~gD~LkiDQSAlTGESLpvtKh~gd~-vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ 250 (942)
T KOG0205|consen 173 LEGDPLKIDQSALTGESLPVTKHPGDE-VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNF 250 (942)
T ss_pred ecCCccccchhhhcCCccccccCCCCc-eecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhH
Confidence 999999999999999999999998887 9999999999999999999999999999998887 45558899999988876
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHH-cCCchHHHHHHHHHHHHHHHhccc
Q 001960 357 IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVA-VPEGLPLAVTLSLAFAMKKMMNDK 435 (991)
Q Consensus 357 i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~-vP~~L~lav~~~l~~~~~~~~~~~ 435 (991)
+...+. +. .++.+...|.... ...+.....+.++++. +|.|||..++++++.+..+++++|
T Consensus 251 ci~si~-~g--~lie~~vmy~~q~---------------R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqg 312 (942)
T KOG0205|consen 251 CICSIA-LG--MLIEITVMYPIQH---------------RLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG 312 (942)
T ss_pred HHHHHH-HH--HHHHHHhhhhhhh---------------hhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcc
Confidence 543221 11 1111222121110 1122233344555555 999999999999999999999999
Q ss_pred cccccchhhhccCCeEEEEeCccCccccCceEEEE--E-EEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCc
Q 001960 436 ALVRHLAACETMGSATSICSDKTGTLTTNHMTVLK--A-CICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGE 512 (991)
Q Consensus 436 ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~ 512 (991)
+++++++|+|+|+.+|++|+|||||||.|+++|.+ + +.... .+++.. ++..+.+ +.
T Consensus 313 AItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~g----------------v~~D~~-~L~A~rA----sr 371 (942)
T KOG0205|consen 313 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKG----------------VDKDDV-LLTAARA----SR 371 (942)
T ss_pred cHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecC----------------CChHHH-HHHHHHH----hh
Confidence 99999999999999999999999999999999977 2 11111 111111 1111111 11
Q ss_pred eeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhcc
Q 001960 513 VVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACD 592 (991)
Q Consensus 513 ~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~ 592 (991)
. ...+.+|.|++....+ ..+.+..++.++..|||+..||....+..++|..+-.+|||||.|++.|.
T Consensus 372 ~---------en~DAID~A~v~~L~d----PKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~ 438 (942)
T KOG0205|consen 372 K---------ENQDAIDAAIVGMLAD----PKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCN 438 (942)
T ss_pred h---------cChhhHHHHHHHhhcC----HHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhh
Confidence 1 1447889999977643 46778899999999999999999999999999999999999999999997
Q ss_pred ccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHH
Q 001960 593 KFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAIC 672 (991)
Q Consensus 593 ~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l 672 (991)
. +.+.++.+.+.+++||++|+|.+++|++..++... +.......++|+.-+-||+|.+..++|++.
T Consensus 439 ~-----------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~---~~~g~pw~~~gllp~fdpprhdsa~tirra 504 (942)
T KOG0205|consen 439 E-----------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK---ESPGGPWEFVGLLPLFDPPRHDSAETIRRA 504 (942)
T ss_pred c-----------cCcchHHHHHHHHHHHHhcchhhhhhhhccccccc---cCCCCCcccccccccCCCCccchHHHHHHH
Confidence 3 23456778899999999999999999998775421 334456789999999999999999999999
Q ss_pred HHCCCEEEEEcCCCHHHHHHHHHHcCCccC--CceeeeCccc-ccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhc
Q 001960 673 RSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEF-REKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL 749 (991)
Q Consensus 673 ~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~--~~~vi~g~~~-~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~ 749 (991)
...|++|.|+|||...-++..++.+|+-+. +..-+-|.+- ..+.....++.+.+..-||.+.|++|.++|+.||++
T Consensus 505 l~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r- 583 (942)
T KOG0205|consen 505 LNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQER- 583 (942)
T ss_pred HhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhc-
Confidence 999999999999999999999999998642 0011111111 122233456666677789999999999999999999
Q ss_pred CCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 750 GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVV 826 (991)
Q Consensus 750 g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~ 826 (991)
|+.++|+|||+||+|+||.||+|||+. .++|.|+.+||+|+....++.+..++..+|.+|.|++.+..|.+...+-
T Consensus 584 ~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitir 659 (942)
T KOG0205|consen 584 KHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 659 (942)
T ss_pred CceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHH
Confidence 999999999999999999999999998 9999999999999999999999999999999999999998887765554
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-77 Score=729.93 Aligned_cols=639 Identities=20% Similarity=0.276 Sum_probs=474.0
Q ss_pred hccchhhhHHHHHhhhhhhhHHHHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhhhhhccCChHHHHhhCCHH
Q 001960 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVE 122 (991)
Q Consensus 43 ~~l~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~v~ 122 (991)
..+....|+...+.+++..+++++.+.+..+.+++. .. ..+...++..||.+.+.+-....++++........-.-
T Consensus 65 ~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~---~~-~~I~~aI~~~Gy~a~~~~~~~~~~~~~~~~~~~~~~~~ 140 (741)
T PRK11033 65 PSCARKVENAVRQLAGVNQVQVLFATEKLVVDADND---IR-AQVESAVQKAGFSLRDEQAAAAAPESRLKSENLPLITL 140 (741)
T ss_pred HHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEeccc---ch-HHHHHHHHhcccccccccchhhhHHHHHHHHHHHHHHH
Confidence 356666777777778888888998888877776433 11 34445567789987654211100110000000111000
Q ss_pred HHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHH--H-HHHH-HHHHHHHHhhhcccCCCC
Q 001960 123 GIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMT--L-MILA-VCALVSLVVGIATEGWPK 198 (991)
Q Consensus 123 ~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~--~-~ill-i~ai~s~~~~~~~~~~~~ 198 (991)
.....+..-. .++... . .+.. |.-- ....+.+|++..|+.++... . -.|+ ++++.+++++
T Consensus 141 ~~~~~~~~~~-~~~~~~---~-~~~~-~~~~--~~~~~~~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~-------- 204 (741)
T PRK11033 141 AVMMAISWGL-EQFNHP---F-GQLA-FIAT--TLVGLYPIARKALRLIRSGSPFAIETLMSVAAIGALFIG-------- 204 (741)
T ss_pred HHHHHHHHHH-hhhhhH---H-HHHH-HHHH--HHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHc--------
Confidence 1112221100 011110 0 1110 1000 01235688889999987532 1 1233 3444444433
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEe
Q 001960 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (991)
Q Consensus 199 ~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~ 278 (991)
.|.++..+++.+++--.+....+.+.++..++|.+ ..+..++|+|||++++|++++|+|||+|.|++||+|||||++++
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~-l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~ 283 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMA-LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS 283 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE
Confidence 24454433322222222222222222222333333 45678999999999999999999999999999999999999999
Q ss_pred ecceEEecccCCCCCcceeccCCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHH
Q 001960 279 GFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358 (991)
Q Consensus 279 g~~l~VDeS~LTGES~pv~k~~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~ 358 (991)
|+ ..||||+|||||.|+.|..++. +|+||.+.+|.++++|+++|.+|.+|||.+++++++.+++|+|+.+|+++.+++
T Consensus 284 g~-~~vdes~lTGEs~Pv~k~~Gd~-V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~ 361 (741)
T PRK11033 284 PF-ASFDESALTGESIPVERATGEK-VPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYT 361 (741)
T ss_pred Cc-EEeecccccCCCCCEecCCCCe-eccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 97 5999999999999999988765 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhcccccc
Q 001960 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALV 438 (991)
Q Consensus 359 ~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilv 438 (991)
+++++++++++++|...+ +. .+...+..++++++++|||+|.+++|+++..++.++.|+|+++
T Consensus 362 ~~v~~~a~~~~~~~~~~~-------~~----------~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gili 424 (741)
T PRK11033 362 PAIMLVALLVILVPPLLF-------AA----------PWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALI 424 (741)
T ss_pred HHHHHHHHHHHHHHHHHc-------cC----------CHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEE
Confidence 999999999888763211 00 1335577889999999999999999999999999999999999
Q ss_pred ccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCC
Q 001960 439 RHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEG 518 (991)
Q Consensus 439 r~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 518 (991)
|+++++|+|+++|+||||||||||+|+|+|+++...+... .++.+.+. .. .+
T Consensus 425 k~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~---------------~~~~l~~a---a~------~e---- 476 (741)
T PRK11033 425 KGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGIS---------------ESELLALA---AA------VE---- 476 (741)
T ss_pred cCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCCC---------------HHHHHHHH---HH------Hh----
Confidence 9999999999999999999999999999999886533210 11222221 11 11
Q ss_pred CceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEE---EEEEeCCCeEEEEEcCchHHHHHhccccc
Q 001960 519 NKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMG---VVIELPEGGFRVHCKGASEIILAACDKFL 595 (991)
Q Consensus 519 ~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~ms---viv~~~~~~~~~~~KGa~e~il~~c~~~~ 595 (991)
..+.||.++|+++++.+.+.+ +||.++++.+. +....++..+ .-|+++.+.+
T Consensus 477 ---~~s~hPia~Ai~~~a~~~~~~-------------~~~~~~~~~~~g~Gv~~~~~g~~~---~ig~~~~~~~------ 531 (741)
T PRK11033 477 ---QGSTHPLAQAIVREAQVRGLA-------------IPEAESQRALAGSGIEGQVNGERV---LICAPGKLPP------ 531 (741)
T ss_pred ---cCCCCHHHHHHHHHHHhcCCC-------------CCCCcceEEEeeEEEEEEECCEEE---EEecchhhhh------
Confidence 126799999999998776543 46777776652 2222333322 2377766532
Q ss_pred cCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHC
Q 001960 596 NSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSA 675 (991)
Q Consensus 596 ~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~a 675 (991)
++ +.+.+.++++..+|.|++++|+ |.+++|+++++|++|||++++|++|+++
T Consensus 532 --------~~----~~~~~~~~~~~~~g~~~v~va~----------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~ 583 (741)
T PRK11033 532 --------LA----DAFAGQINELESAGKTVVLVLR----------------NDDVLGLIALQDTLRADARQAISELKAL 583 (741)
T ss_pred --------cc----HHHHHHHHHHHhCCCEEEEEEE----------------CCEEEEEEEEecCCchhHHHHHHHHHHC
Confidence 11 2244556788999999999984 4689999999999999999999999999
Q ss_pred CCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEE
Q 001960 676 GITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAV 755 (991)
Q Consensus 676 Gi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~ 755 (991)
|++++|+|||+..+|.++|+++||. .+++.+|+||..+|+.+|+. +.|+|
T Consensus 584 gi~~~llTGd~~~~a~~ia~~lgi~----------------------------~~~~~~p~~K~~~v~~l~~~--~~v~m 633 (741)
T PRK11033 584 GIKGVMLTGDNPRAAAAIAGELGID----------------------------FRAGLLPEDKVKAVTELNQH--APLAM 633 (741)
T ss_pred CCEEEEEcCCCHHHHHHHHHHcCCC----------------------------eecCCCHHHHHHHHHHHhcC--CCEEE
Confidence 9999999999999999999999995 56789999999999999954 57999
Q ss_pred eCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 756 TGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 833 (991)
Q Consensus 756 iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~ 833 (991)
+|||.||+|||++|||||+|| +|++.++++||+++.++++..+.+++++||++++||++|+.|++.||+++++++++
T Consensus 634 vGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~ 710 (741)
T PRK11033 634 VGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLL 710 (741)
T ss_pred EECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 89999999999999999999999999999999999999999999999998888764
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-79 Score=704.77 Aligned_cols=662 Identities=22% Similarity=0.305 Sum_probs=505.1
Q ss_pred chhhhHHHHHhhhhhhhHHHHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhh-hhhc-----cCC----hH-H
Q 001960 46 SKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELG-SIVE-----GHD----IK-K 114 (991)
Q Consensus 46 ~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~-----~~~----~~-~ 114 (991)
....|+...+.++++.++|...+.++.+.+++. ...+.++.+.+++.||...-.... ...+ ..+ .+ .
T Consensus 161 ~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~--~~~pr~i~k~ie~~~~~~~~~~~~~~~~~~~l~~~~ei~~w~~~f 238 (951)
T KOG0207|consen 161 VSKIESILERLRGVKSFSVSLATDTAIVVYDPE--ITGPRDIIKAIEETGFEASVRPYGDTTFKNSLKHKEEIRKWKRPF 238 (951)
T ss_pred hhhhHHHHhhccCeeEEEEeccCCceEEEeccc--ccChHHHHHHHHhhcccceeeeccccchhhhhhhhhHHHhcchHH
Confidence 345577788899999999999999999888776 566778888888888865433211 1111 000 11 1
Q ss_pred HHhhCCHHHH---HH----------HhCCCcCCCCChhHHHHHHHHHhcCCCcCCC----CCCccHHHHHHHHHhhHHHH
Q 001960 115 LKVHGGVEGI---AE----------KLSTSITDGISTSEHLLNRRKEIYGINKFTE----SPARGFWVYVWEALHDMTLM 177 (991)
Q Consensus 115 l~~~~~v~~~---~~----------~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~----~~~~~f~~~~~~~~~~~~~~ 177 (991)
+...+ .... +. .+......|++-.. .. .+.+.. ..+++|+.-.|+++++....
T Consensus 239 l~s~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l-------~~~L~~~vqf~~G~~fy~~A~ksL~~g~~n 308 (951)
T KOG0207|consen 239 LISLG-FSLPVSFAMIICPPLAWILALLVPFLPGLSYGN--SL-------SFVLATPVQFVGGRPFYLAAYKSLKRGSAN 308 (951)
T ss_pred HHHHH-HHHHHHHHHHHhccchhhhhhhccccccchhhh--HH-------HhhhheeeEEecceeeHHHHHHHHhcCCCC
Confidence 11111 1111 11 11113334444332 11 122222 25789999999999877544
Q ss_pred H--HH-HHHHHHHHhhhcc------cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------hcCCcEEEE
Q 001960 178 I--LA-VCALVSLVVGIAT------EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKITVQV 242 (991)
Q Consensus 178 i--ll-i~ai~s~~~~~~~------~~~~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~------~~~~~~v~V 242 (991)
| |+ +.+..++++.+.. ...+..+||...|++.++. +++|.|.++..+..+ .+.+.++.+
T Consensus 309 MdvLv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~------lgr~LE~~Ak~kts~alskLmsl~p~~a~i 382 (951)
T KOG0207|consen 309 MDVLVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFIT------LGRWLESLAKGKTSEALSKLMSLAPSKATI 382 (951)
T ss_pred ceeehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHH------HHHHHHHHhhccchHHHHHHhhcCcccceE
Confidence 3 21 1222222222211 1225567787666555444 489999988776443 346778999
Q ss_pred EeCCe-EEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccCCCCeEEeccEEecCeEEEEEE
Q 001960 243 ARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVT 321 (991)
Q Consensus 243 ~R~G~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~~~~~l~sGt~v~~g~~~~~V~ 321 (991)
+.+|+ .++|+.+.|.+||+|.+.||++||+||++++|++ +||||.+|||+.||.|..+++ +.+||.+.+|...+.+|
T Consensus 383 i~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~VDEs~iTGEs~PV~Kk~gs~-ViaGsiN~nG~l~VkaT 460 (951)
T KOG0207|consen 383 IEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-EVDESLITGESMPVPKKKGST-VIAGSINLNGTLLVKAT 460 (951)
T ss_pred eecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-eechhhccCCceecccCCCCe-eeeeeecCCceEEEEEE
Confidence 99886 8999999999999999999999999999999985 999999999999999988776 99999999999999999
Q ss_pred EEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHH
Q 001960 322 TVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFF 401 (991)
Q Consensus 322 ~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (991)
.+|.+|.+++|.+++++++..++|+|+.+|+++.+++++++++++.++++|.+...+.... ...| ...+...|
T Consensus 461 ~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~---~~~~----~~~~~~a~ 533 (951)
T KOG0207|consen 461 KVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKY---PRSF----FDAFSHAF 533 (951)
T ss_pred eccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccC---cchh----hHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999987543321111 1111 13567788
Q ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeec
Q 001960 402 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVD 481 (991)
Q Consensus 402 ~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~ 481 (991)
..++++++++|||+|.|++|++...+....+++|+|+|..+++|.+.++++|.||||||||+|+++|+++....+.
T Consensus 534 ~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~---- 609 (951)
T KOG0207|consen 534 QLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP---- 609 (951)
T ss_pred HhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc----
Confidence 8999999999999999999999999999999999999999999999999999999999999999999998765432
Q ss_pred CCCCCCCCCCCCCh-hHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCC
Q 001960 482 NSKGTPAFGSSIPA-SASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNS 560 (991)
Q Consensus 482 ~~~~~~~~~~~~~~-~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s 560 (991)
++. +.+.+. +..+ .-+.||..+|+++||++.... .....++....|..
T Consensus 610 -----------~~~~e~l~~v---------~a~E-------s~SeHPig~AIv~yak~~~~~----~~~~~~~~~~~~pg 658 (951)
T KOG0207|consen 610 -----------ISLKEALALV---------AAME-------SGSEHPIGKAIVDYAKEKLVE----PNPEGVLSFEYFPG 658 (951)
T ss_pred -----------ccHHHHHHHH---------HHHh-------cCCcCchHHHHHHHHHhcccc----cCccccceeecccC
Confidence 011 122211 1111 127799999999999877611 11112223333333
Q ss_pred CCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCC
Q 001960 561 VKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA 640 (991)
Q Consensus 561 ~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~ 640 (991)
+.+. +-+...+.. .+-|.-+.+.. +|...+ +.+++.+++....|..+.+++
T Consensus 659 ~g~~--~~~~~~~~~---i~iGN~~~~~r--------~~~~~~------~~i~~~~~~~e~~g~tvv~v~---------- 709 (951)
T KOG0207|consen 659 EGIY--VTVTVDGNE---VLIGNKEWMSR--------NGCSIP------DDILDALTESERKGQTVVYVA---------- 709 (951)
T ss_pred CCcc--cceEEeeeE---EeechHHHHHh--------cCCCCc------hhHHHhhhhHhhcCceEEEEE----------
Confidence 3322 222222222 23366554432 332222 236677777788898888887
Q ss_pred CCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHH
Q 001960 641 DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720 (991)
Q Consensus 641 ~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~ 720 (991)
-|.++.|+++++|++|||+..+|+.||+.|+++.|+||||..+|+++|+++|+..
T Consensus 710 ------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~------------------- 764 (951)
T KOG0207|consen 710 ------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN------------------- 764 (951)
T ss_pred ------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce-------------------
Confidence 4678999999999999999999999999999999999999999999999999754
Q ss_pred hhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHH
Q 001960 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV 800 (991)
Q Consensus 721 ~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~ 800 (991)
|+|...|+||.+.|+.+|++ ++.|+|+|||+||+|||.+|||||+|| .|+++|.++||+|++.+|+..++
T Consensus 765 --------V~aev~P~~K~~~Ik~lq~~-~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~ 834 (951)
T KOG0207|consen 765 --------VYAEVLPEQKAEKIKEIQKN-GGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVP 834 (951)
T ss_pred --------EEeccCchhhHHHHHHHHhc-CCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhH
Confidence 99999999999999999999 999999999999999999999999999 88999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 801 TVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 833 (991)
Q Consensus 801 ~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~ 833 (991)
.+++.+|++..||+.|+.|+++||++.++++..
T Consensus 835 ~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAag 867 (951)
T KOG0207|consen 835 FAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAG 867 (951)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhee
Confidence 999999999999999999999999999998764
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-76 Score=702.28 Aligned_cols=491 Identities=40% Similarity=0.603 Sum_probs=428.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-hcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEeccc
Q 001960 210 ILLVVFVTATSDYKQSLQFKDLDR-EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESS 288 (991)
Q Consensus 210 lllvi~v~~~~~~~~~~~~~~l~~-~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~ 288 (991)
+++..++....+++.++..+++.+ ..++.+++|+|+| +++|++++|+|||+|.+++||+|||||++++|+ +.||||+
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-~~vdes~ 83 (499)
T TIGR01494 6 VLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-CFVDESN 83 (499)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-EEEEccc
Confidence 445556666677777777777765 3677899999999 999999999999999999999999999999995 7999999
Q ss_pred CCCCCcceeccCCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHH-HHHHHHHHHHHHH
Q 001960 289 LTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA-TIIGKIGLFFAVV 367 (991)
Q Consensus 289 LTGES~pv~k~~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~-~~i~~~~l~~ai~ 367 (991)
|||||.|+.|.+++. +++||.+.+|++++.|+.+|.+|..+++...+.++...++|++++.++++ .++.++.++++++
T Consensus 84 LTGEs~pv~k~~g~~-v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~ 162 (499)
T TIGR01494 84 LTGESVPVLKTAGDA-VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALA 162 (499)
T ss_pred ccCCCCCeeeccCCc-cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999987765 99999999999999999999999999999999888877899999999999 7888877777777
Q ss_pred HHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhcc
Q 001960 368 TFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETM 447 (991)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~l 447 (991)
++++|...+. ... .+...+..++++++++|||+||+++++++..+..+|.++|+++|+++++|+|
T Consensus 163 ~~~~~~~~~~------------~~~---~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l 227 (499)
T TIGR01494 163 VFLFWAIGLW------------DPN---SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEEL 227 (499)
T ss_pred HHHHHHHHHc------------ccc---cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhc
Confidence 7766543211 000 2456788999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCCh
Q 001960 448 GSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTP 527 (991)
Q Consensus 448 g~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p 527 (991)
|+++++|||||||||+|+|++++++..+. .+.++||
T Consensus 228 ~~v~~i~fDKTGTLT~~~~~v~~~~~~~~--------------------------------------------~~~s~hp 263 (499)
T TIGR01494 228 GKVDYICSDKTGTLTKNEMSFKKVSVLGG--------------------------------------------EYLSGHP 263 (499)
T ss_pred cCCcEEEeeCCCccccCceEEEEEEecCC--------------------------------------------CcCCCCh
Confidence 99999999999999999999998865321 0127799
Q ss_pred hhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHH
Q 001960 528 TETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEA 607 (991)
Q Consensus 528 ~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~ 607 (991)
.|.|+++++...+ ++..||++.+|+|+++++.+++ .++||+++.+++.|..
T Consensus 264 ~~~ai~~~~~~~~------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~-------------- 314 (499)
T TIGR01494 264 DERALVKSAKWKI------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD-------------- 314 (499)
T ss_pred HHHHHHHHhhhcC------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------------
Confidence 9999999886421 2568999999999999886433 3689999999998852
Q ss_pred HHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCH
Q 001960 608 AVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNI 687 (991)
Q Consensus 608 ~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~ 687 (991)
+.+..++++.+|+|++++|++ .+++|+++++|++|++++++|+.|+++|++++|+|||+.
T Consensus 315 ----~~~~~~~~~~~g~~~~~~a~~----------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~ 374 (499)
T TIGR01494 315 ----LEEKVKELAQSGLRVLAVASK----------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNV 374 (499)
T ss_pred ----HHHHHHHHHhCCCEEEEEEEC----------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCH
Confidence 123345678899999999964 268999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhh
Q 001960 688 NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALH 767 (991)
Q Consensus 688 ~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~ 767 (991)
.+|..+|+++|| +++++|+||.++|+.+|++ |+.|+|+|||.||+|||+
T Consensus 375 ~~a~~ia~~lgi------------------------------~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~nD~~al~ 423 (499)
T TIGR01494 375 LTAKAIAKELGI------------------------------FARVTPEEKAALVEALQKK-GRVVAMTGDGVNDAPALK 423 (499)
T ss_pred HHHHHHHHHcCc------------------------------eeccCHHHHHHHHHHHHHC-CCEEEEECCChhhHHHHH
Confidence 999999999986 4889999999999999988 999999999999999999
Q ss_pred hCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHH
Q 001960 768 EADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQ 847 (991)
Q Consensus 768 ~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~q 847 (991)
+|||||+|| |+++||++++++++..+..++++||++++++++++.|.+++|++.+++++++.+
T Consensus 424 ~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~----------- 486 (499)
T TIGR01494 424 KADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV----------- 486 (499)
T ss_pred hCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 999999997 689999999999999999999999999999999999999999998888876431
Q ss_pred HHHHHHHHhHHHHHH
Q 001960 848 LLWVNMIMDTLGALA 862 (991)
Q Consensus 848 ll~~nli~d~l~~la 862 (991)
+|+++++.++++
T Consensus 487 ---~~~~~~~~~~~~ 498 (499)
T TIGR01494 487 ---LNLVPPGLAALA 498 (499)
T ss_pred ---HHHHhcchhhhc
Confidence 888888877654
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-74 Score=684.58 Aligned_cols=529 Identities=27% Similarity=0.394 Sum_probs=419.2
Q ss_pred CccHHHHHHHHHhhHHHHH--HHHHHH-HHHHhhh---ccc-----CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH-
Q 001960 160 ARGFWVYVWEALHDMTLMI--LAVCAL-VSLVVGI---ATE-----GWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQ- 227 (991)
Q Consensus 160 ~~~f~~~~~~~~~~~~~~i--lli~ai-~s~~~~~---~~~-----~~~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~- 227 (991)
+.+|++..|+.++.....+ ++..++ .+++++. ... +..++||++.++++.++++ .+|.+++.
T Consensus 2 g~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------g~~le~~~~ 75 (562)
T TIGR01511 2 GRPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILL------GRWLEMLAK 75 (562)
T ss_pred cHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHH------HHHHHHHHH
Confidence 4678888898887543222 222222 2222221 111 1235688887765544433 34444332
Q ss_pred ------HHHhhhhcCCcEEEEEeC-CeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccC
Q 001960 228 ------FKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300 (991)
Q Consensus 228 ------~~~l~~~~~~~~v~V~R~-G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~ 300 (991)
.++|.+ ..+..++|+|+ |++++|++++|+|||+|.|++||+|||||++++|+ +.||||+|||||.|+.|..
T Consensus 76 ~~a~~~~~~L~~-~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~-~~vdes~lTGEs~pv~k~~ 153 (562)
T TIGR01511 76 GRASDALSKLAK-LQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGE-SEVDESLVTGESLPVPKKV 153 (562)
T ss_pred HHHHHHHHHHHh-cCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECc-eEEehHhhcCCCCcEEcCC
Confidence 223333 45668888885 67799999999999999999999999999999998 4999999999999999988
Q ss_pred CCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 001960 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRK 380 (991)
Q Consensus 301 ~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~ 380 (991)
++. +|+||.+.+|+++++|+++|.+|.+|+|.+++.+++.+++|+|+..++++.++.+++++++++++++|.
T Consensus 154 gd~-V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------- 225 (562)
T TIGR01511 154 GDP-VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------- 225 (562)
T ss_pred CCE-EEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 775 999999999999999999999999999999999999999999999999999999998888887776542
Q ss_pred ccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCc
Q 001960 381 LQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGT 460 (991)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGT 460 (991)
..+..++++++++|||+|++++|+++..++.+++++|+++|+++++|+|+++|+||||||||
T Consensus 226 ------------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGT 287 (562)
T TIGR01511 226 ------------------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGT 287 (562)
T ss_pred ------------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCC
Confidence 24667899999999999999999999999999999999999999999999999999999999
Q ss_pred cccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcC
Q 001960 461 LTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540 (991)
Q Consensus 461 LT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g 540 (991)
||+|+|++.++...+... .++.+.+. .. .+ ..+.||.++|+++++.+.+
T Consensus 288 LT~g~~~v~~i~~~~~~~---------------~~~~l~~a---a~------~e-------~~s~HPia~Ai~~~~~~~~ 336 (562)
T TIGR01511 288 LTQGKPTVTDVHVFGDRD---------------RTELLALA---AA------LE-------AGSEHPLAKAIVSYAKEKG 336 (562)
T ss_pred CcCCCEEEEEEecCCCCC---------------HHHHHHHH---HH------Hh-------ccCCChHHHHHHHHHHhcC
Confidence 999999999876432210 11222221 11 11 1266999999999998766
Q ss_pred CChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHH
Q 001960 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFA 620 (991)
Q Consensus 541 ~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a 620 (991)
.+... ..-.+.+| . .++....++.. +..|+++.+.+ ++. .++ ++.
T Consensus 337 ~~~~~----~~~~~~~~----g--~Gi~~~~~g~~---~~iG~~~~~~~--------~~~--~~~------------~~~ 381 (562)
T TIGR01511 337 ITLVE----VSDFKAIP----G--IGVEGTVEGTK---IQLGNEKLLGE--------NAI--KID------------GKA 381 (562)
T ss_pred CCcCC----CCCeEEEC----C--ceEEEEECCEE---EEEECHHHHHh--------CCC--CCC------------hhh
Confidence 54211 00011111 1 12222222222 23466665422 111 111 134
Q ss_pred HcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 001960 621 SEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (991)
Q Consensus 621 ~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~ 700 (991)
++|.+++.++ .|.+++|++.++|++|||++++|++|++.|++++|+|||+..++.++++++||.
T Consensus 382 ~~g~~~~~~~----------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~ 445 (562)
T TIGR01511 382 EQGSTSVLVA----------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN 445 (562)
T ss_pred hCCCEEEEEE----------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc
Confidence 6788887775 467899999999999999999999999999999999999999999999999993
Q ss_pred cCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCc
Q 001960 701 TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780 (991)
Q Consensus 701 ~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~ 780 (991)
++++..|++|.++++.++++ ++.|+|+|||.||+||+++||+||+|| .|+
T Consensus 446 ----------------------------~~~~~~p~~K~~~v~~l~~~-~~~v~~VGDg~nD~~al~~A~vgia~g-~g~ 495 (562)
T TIGR01511 446 ----------------------------VRAEVLPDDKAALIKELQEK-GRVVAMVGDGINDAPALAQADVGIAIG-AGT 495 (562)
T ss_pred ----------------------------EEccCChHHHHHHHHHHHHc-CCEEEEEeCCCccHHHHhhCCEEEEeC-CcC
Confidence 77888999999999999988 899999999999999999999999999 899
Q ss_pred HHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 834 (991)
Q Consensus 781 ~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~ 834 (991)
+.+++.||++++++++..+.+++++||+++++|++|+.|++.||++.+++++.+
T Consensus 496 ~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~ 549 (562)
T TIGR01511 496 DVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGV 549 (562)
T ss_pred HHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999998887743
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-74 Score=686.73 Aligned_cols=511 Identities=28% Similarity=0.385 Sum_probs=420.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCC-eEEEeecCCcccCcEEEeCCCCeecccEEEEe
Q 001960 200 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNG-FRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (991)
Q Consensus 200 ~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G-~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~ 278 (991)
|.++..+++.+++.-++....+++.++..+++.+ .++..++|+||| ++++|+++||+|||+|.+++||+|||||++++
T Consensus 18 ~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~-~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~ 96 (556)
T TIGR01525 18 VLEGALLLFLFLLGETLEERAKGRASDALSALLA-LAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVIS 96 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEe
Confidence 5556555544444444444444444444445543 456689999995 99999999999999999999999999999999
Q ss_pred ecceEEecccCCCCCcceeccCCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHH
Q 001960 279 GFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358 (991)
Q Consensus 279 g~~l~VDeS~LTGES~pv~k~~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~ 358 (991)
|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|+++++|+++|.+|++|++.+.+.++..+++|+|+.+++++.++.
T Consensus 97 g~-~~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~ 174 (556)
T TIGR01525 97 GE-SEVDESALTGESMPVEKKEGD-EVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYV 174 (556)
T ss_pred cc-eEEeehhccCCCCCEecCCcC-EEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Confidence 97 599999999999999998766 5999999999999999999999999999999999888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhcccccc
Q 001960 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALV 438 (991)
Q Consensus 359 ~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilv 438 (991)
+++++++++++++|.... . . ..+..++++++++|||+||+++|++++.++++|.++|+++
T Consensus 175 ~~~l~~a~~~~~~~~~~~---------------~---~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilv 234 (556)
T TIGR01525 175 PAVLAIALLTFVVWLALG---------------A---L--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILI 234 (556)
T ss_pred HHHHHHHHHHHHHHHHhc---------------c---c--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCcee
Confidence 999998888887764210 0 0 4577889999999999999999999999999999999999
Q ss_pred ccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCC
Q 001960 439 RHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEG 518 (991)
Q Consensus 439 r~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 518 (991)
|+++++|+||++|++|||||||||+|+|+|.++...+... ...++.++.. .. .+
T Consensus 235 k~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------------~~~~~~l~~a---~~------~e---- 288 (556)
T TIGR01525 235 KGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-------------ISEEELLALA---AA------LE---- 288 (556)
T ss_pred cCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-------------ccHHHHHHHH---HH------Hh----
Confidence 9999999999999999999999999999999887543210 0011222211 11 11
Q ss_pred CceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCC
Q 001960 519 NKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSN 598 (991)
Q Consensus 519 ~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~ 598 (991)
..+.||+++|+++++.+.+.+... +| + ....++.++..++||+++..+..|+.. ..+
T Consensus 289 ---~~~~hp~~~Ai~~~~~~~~~~~~~-----------~~--~------~~~~~~~gi~~~~~g~~~~~lg~~~~~-~~~ 345 (556)
T TIGR01525 289 ---QSSSHPLARAIVRYAKKRGLELPK-----------QE--D------VEEVPGKGVEATVDGQEEVRIGNPRLL-ELA 345 (556)
T ss_pred ---ccCCChHHHHHHHHHHhcCCCccc-----------cc--C------eeEecCCeEEEEECCeeEEEEecHHHH-hhc
Confidence 126799999999999877654221 11 0 012234556666777666666666532 111
Q ss_pred CeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCC-C
Q 001960 599 GEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAG-I 677 (991)
Q Consensus 599 g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aG-i 677 (991)
+.. ....++.++.++.+|+|++.++. |.+++|.+.++|++|||++++|+.|+++| +
T Consensus 346 ~~~-------~~~~~~~~~~~~~~g~~~~~v~~----------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i 402 (556)
T TIGR01525 346 AEP-------ISASPDLLNEGESQGKTVVFVAV----------------DGELLGVIALRDQLRPEAKEAIAALKRAGGI 402 (556)
T ss_pred CCC-------chhhHHHHHHHhhCCcEEEEEEE----------------CCEEEEEEEecccchHhHHHHHHHHHHcCCC
Confidence 111 11123456678899999998873 46899999999999999999999999999 9
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeC
Q 001960 678 TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTG 757 (991)
Q Consensus 678 ~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iG 757 (991)
+++|+|||+..++.++++++|+.. +|++..|++|.++++.+++. ++.|+|+|
T Consensus 403 ~v~ivTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p~~K~~~v~~l~~~-~~~v~~vG 454 (556)
T TIGR01525 403 KLVMLTGDNRSAAEAVAAELGIDE---------------------------VHAELLPEDKLAIVKELQEE-GGVVAMVG 454 (556)
T ss_pred eEEEEeCCCHHHHHHHHHHhCCCe---------------------------eeccCCHHHHHHHHHHHHHc-CCEEEEEE
Confidence 999999999999999999999953 88999999999999999988 89999999
Q ss_pred CCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 758 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 834 (991)
Q Consensus 758 DG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~ 834 (991)
||.||++|+++||+|++|| ++++.+++.||+++.++++..+.+++++||+++.||++++.|++.||++.+++++.+
T Consensus 455 Dg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g 530 (556)
T TIGR01525 455 DGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGG 530 (556)
T ss_pred CChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 899999999999999999999999999999999999999999999999998887754
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-73 Score=706.76 Aligned_cols=544 Identities=24% Similarity=0.342 Sum_probs=434.0
Q ss_pred CCccHHHHHHHHHhhHHHHH--HHHHHH-HHHHhhh----c----ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 159 PARGFWVYVWEALHDMTLMI--LAVCAL-VSLVVGI----A----TEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQ 227 (991)
Q Consensus 159 ~~~~f~~~~~~~~~~~~~~i--lli~ai-~s~~~~~----~----~~~~~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~ 227 (991)
.+++|++..|+++++....+ |+.+++ .++++++ . ..+..+.|||..++++.+++ +++|.|++.
T Consensus 233 ~g~~~~~~a~~~l~~~~~~md~l~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------~g~~le~~~ 306 (834)
T PRK10671 233 AGGHFYRSAWKSLLNGSATMDTLVALGTGAAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLIN------LGHMLEARA 306 (834)
T ss_pred hhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHH------HHHHHHHHH
Confidence 46688888888887543222 222222 3333221 1 11112347787655544333 356666555
Q ss_pred HHH----hhh--hcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccCC
Q 001960 228 FKD----LDR--EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL 301 (991)
Q Consensus 228 ~~~----l~~--~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~~ 301 (991)
.++ +.+ ...+..++|+|||++++|+.++|+|||+|.|++||+|||||++++|+ ..||||+|||||.|+.|..+
T Consensus 307 ~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~-~~vdeS~lTGEs~pv~k~~g 385 (834)
T PRK10671 307 RQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGE-AWLDEAMLTGEPIPQQKGEG 385 (834)
T ss_pred HHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEce-EEEeehhhcCCCCCEecCCC
Confidence 443 222 24567899999999999999999999999999999999999999996 59999999999999999887
Q ss_pred CCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 001960 302 NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKL 381 (991)
Q Consensus 302 ~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~ 381 (991)
+ .+|+||.+.+|.++++|+++|.+|.+|+|.+++++++..++|+|+..++++.++.+++++++++++++|...
T Consensus 386 d-~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~------ 458 (834)
T PRK10671 386 D-SVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFF------ 458 (834)
T ss_pred C-EEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------
Confidence 6 499999999999999999999999999999999998888999999999999999999998888888776421
Q ss_pred cCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCcc
Q 001960 382 QEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTL 461 (991)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTL 461 (991)
+. ...+...+..++++++++|||+|++++|+++..++.+++++|+++|+++++|+|+++|++||||||||
T Consensus 459 --~~--------~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTL 528 (834)
T PRK10671 459 --GP--------APQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTL 528 (834)
T ss_pred --CC--------chHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCcc
Confidence 00 01244567789999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCC
Q 001960 462 TTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGG 541 (991)
Q Consensus 462 T~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~ 541 (991)
|+|+|+|.++...+.. ++ .+++..+...++ .+.||.++|+++++.....
T Consensus 529 T~g~~~v~~~~~~~~~----------------~~--~~~l~~a~~~e~-------------~s~hp~a~Ai~~~~~~~~~ 577 (834)
T PRK10671 529 TEGKPQVVAVKTFNGV----------------DE--AQALRLAAALEQ-------------GSSHPLARAILDKAGDMTL 577 (834)
T ss_pred ccCceEEEEEEccCCC----------------CH--HHHHHHHHHHhC-------------CCCCHHHHHHHHHHhhCCC
Confidence 9999999887643221 01 122222222221 1679999999998763321
Q ss_pred ChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHH
Q 001960 542 DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFAS 621 (991)
Q Consensus 542 ~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~ 621 (991)
. ...+|..... .++....+ +. .+++|+++.+.+.. +. .+.+.+.++++++
T Consensus 578 ~-----------~~~~~~~~~g-~Gv~~~~~-g~--~~~~G~~~~~~~~~------------~~---~~~~~~~~~~~~~ 627 (834)
T PRK10671 578 P-----------QVNGFRTLRG-LGVSGEAE-GH--ALLLGNQALLNEQQ------------VD---TKALEAEITAQAS 627 (834)
T ss_pred C-----------CcccceEecc-eEEEEEEC-CE--EEEEeCHHHHHHcC------------CC---hHHHHHHHHHHHh
Confidence 1 1122322221 22222222 22 24569988764311 11 1235566777889
Q ss_pred cccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 001960 622 EALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (991)
Q Consensus 622 ~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~ 701 (991)
+|.+++.+++ |..++|.++++|++||+++++|++|++.|+++.|+|||+..++.++++++||..
T Consensus 628 ~g~~~v~va~----------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~ 691 (834)
T PRK10671 628 QGATPVLLAV----------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE 691 (834)
T ss_pred CCCeEEEEEE----------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE
Confidence 9999998884 457899999999999999999999999999999999999999999999999964
Q ss_pred CCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcH
Q 001960 702 DNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 781 (991)
Q Consensus 702 ~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~ 781 (991)
++++..|++|.++++.++.+ ++.|+|+|||.||+||+++||+||+|| +|++
T Consensus 692 ---------------------------~~~~~~p~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~ 742 (834)
T PRK10671 692 ---------------------------VIAGVLPDGKAEAIKRLQSQ-GRQVAMVGDGINDAPALAQADVGIAMG-GGSD 742 (834)
T ss_pred ---------------------------EEeCCCHHHHHHHHHHHhhc-CCEEEEEeCCHHHHHHHHhCCeeEEec-CCCH
Confidence 88999999999999999988 999999999999999999999999999 8999
Q ss_pred HHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 782 VAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 832 (991)
Q Consensus 782 ~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~ 832 (991)
.++++||++++++++..|.+++++||+++.+|++|+.|++.||++++++++
T Consensus 743 ~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 743 VAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998776
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-72 Score=670.07 Aligned_cols=502 Identities=27% Similarity=0.348 Sum_probs=410.5
Q ss_pred HHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCccc
Q 001960 179 LAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLP 258 (991)
Q Consensus 179 lli~ai~s~~~~~~~~~~~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvv 258 (991)
+.++++++++.+ .|+|+..+++.+++..++....+++.++..+++.+ .++.+++|+|||++++|++++|+|
T Consensus 5 ~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~-~~~~~~~v~r~g~~~~i~~~~l~~ 75 (536)
T TIGR01512 5 MALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALME-LAPDTARVLRGGSLEEVAVEELKV 75 (536)
T ss_pred HHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCEEEEEEHHHCCC
Confidence 445555666554 47888666555555444444444444444555544 456789999999999999999999
Q ss_pred CcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccCCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcC
Q 001960 259 GDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSE 338 (991)
Q Consensus 259 GDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~ 338 (991)
||+|.+++||+|||||++++|+ +.||||+|||||.|+.|..++ .+|+||.+.+|+++++|++||.+|.+|++.+.+.+
T Consensus 76 GDiv~v~~G~~iP~Dg~ii~g~-~~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~ 153 (536)
T TIGR01512 76 GDVVVVKPGERVPVDGVVLSGT-STVDESALTGESVPVEKAPGD-EVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEE 153 (536)
T ss_pred CCEEEEcCCCEeecceEEEeCc-EEEEecccCCCCCcEEeCCCC-EEEeeeEECCceEEEEEEEeccccHHHHHHHHHHH
Confidence 9999999999999999999997 599999999999999998766 59999999999999999999999999999999998
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHH
Q 001960 339 GGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418 (991)
Q Consensus 339 ~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~l 418 (991)
++.+++|+|+.+++++.++.++.+.+++++++++.. .. . +...+..++++++++|||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------~----~~~~~~~~~svlv~~~P~aL~l 214 (536)
T TIGR01512 154 AQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGL---LK------------R----WPFWVYRALVLLVVASPCALVI 214 (536)
T ss_pred HhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc------------c----cHHHHHHHHHHHhhcCcccccc
Confidence 888889999999999999999988888777665431 00 0 0125777899999999999999
Q ss_pred HHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHH
Q 001960 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASAS 498 (991)
Q Consensus 419 av~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (991)
++|+++..++.+|.++|+++|+++++|++|++|++|||||||||+|+|++.++... +.+
T Consensus 215 a~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------------~~l 273 (536)
T TIGR01512 215 SAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------------EVL 273 (536)
T ss_pred chHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH---------------------HHH
Confidence 99999999999999999999999999999999999999999999999999876421 122
Q ss_pred HHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCce--EEEEEEeCCCeE
Q 001960 499 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ--MGVVIELPEGGF 576 (991)
Q Consensus 499 ~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~--msviv~~~~~~~ 576 (991)
+.. ... + ..+.||.++|+++++.+.+ ||++.+.. .++.....+..+
T Consensus 274 ~~a---~~~------e-------~~~~hp~~~Ai~~~~~~~~----------------~~~~~~~~~g~gi~~~~~g~~~ 321 (536)
T TIGR01512 274 RLA---AAA------E-------QASSHPLARAIVDYARKRE----------------NVESVEEVPGEGVRAVVDGGEV 321 (536)
T ss_pred HHH---HHH------h-------ccCCCcHHHHHHHHHHhcC----------------CCcceEEecCCeEEEEECCeEE
Confidence 221 111 1 1267999999999987653 22222211 122222222222
Q ss_pred EEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEee
Q 001960 577 RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVG 656 (991)
Q Consensus 577 ~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~ 656 (991)
..|+++.+.+. + ...+..+|.+++.++ .|..++|.+.
T Consensus 322 ---~ig~~~~~~~~--------~----------------~~~~~~~~~~~~~v~----------------~~~~~~g~i~ 358 (536)
T TIGR01512 322 ---RIGNPRSLEAA--------V----------------GARPESAGKTIVHVA----------------RDGTYLGYIL 358 (536)
T ss_pred ---EEcCHHHHhhc--------C----------------CcchhhCCCeEEEEE----------------ECCEEEEEEE
Confidence 23665543221 1 013455676766554 4678999999
Q ss_pred ccCCCcccHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccCh
Q 001960 657 IKDPMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (991)
Q Consensus 657 i~D~lr~~v~~~I~~l~~aGi-~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (991)
++|++|||++++|++|+++|+ ++.|+|||+..++..+++++|+.. ++++..|
T Consensus 359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p 411 (536)
T TIGR01512 359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE---------------------------VHAELLP 411 (536)
T ss_pred EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh---------------------------hhhccCc
Confidence 999999999999999999999 999999999999999999999964 7889999
Q ss_pred hhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQK 815 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k 815 (991)
++|..+++.++++ ++.|+|+|||.||++|+++||+|++||.++++.++++||+++.++++..+.+++.+||+++++|++
T Consensus 412 ~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~ 490 (536)
T TIGR01512 412 EDKLEIVKELREK-YGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQ 490 (536)
T ss_pred HHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988 899999999999999999999999999668999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 001960 816 FVQFQLTVNVVALIVNFSS 834 (991)
Q Consensus 816 ~i~~~l~~n~~~i~~~~~~ 834 (991)
|+.|++.||++++++++++
T Consensus 491 nl~~a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 491 NVVIALGIILLLILLALFG 509 (536)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999888754
|
. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-73 Score=637.05 Aligned_cols=741 Identities=23% Similarity=0.301 Sum_probs=531.8
Q ss_pred CCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHH
Q 001960 134 DGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLV 213 (991)
Q Consensus 134 ~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~~~d~~~i~~~lllv 213 (991)
.|.. ++.++..-.++||.|.+..+ .++|-+++.|.-..|++.+..+|..+.+. + +.||.+. +.++++
T Consensus 161 ~G~~-~~~~i~~a~~~~G~N~fdi~-vPtF~eLFkE~A~aPfFVFQVFcvgLWCL----D----eyWYySl---FtLfMl 227 (1160)
T KOG0209|consen 161 TGHE-EESEIKLAKHKYGKNKFDIV-VPTFSELFKEHAVAPFFVFQVFCVGLWCL----D----EYWYYSL---FTLFML 227 (1160)
T ss_pred cCcc-hHHHHHHHHHHhcCCccccC-CccHHHHHHHhccCceeeHhHHhHHHHHh----H----HHHHHHH---HHHHHH
Confidence 5776 44457777778999999654 56799999999888887777666665443 2 2577654 334455
Q ss_pred HHHHHHHHHHHHHHHHHhhhh-cCCcEEEEEeCCeEEEeecCCcccCcEEEeCC---CCeecccEEEEeecceEEecccC
Q 001960 214 VFVTATSDYKQSLQFKDLDRE-KKKITVQVARNGFRRKISIYDLLPGDIVHLCM---GDQVPADGLFVSGFSVLINESSL 289 (991)
Q Consensus 214 i~v~~~~~~~~~~~~~~l~~~-~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~---Gd~VPaDgill~g~~l~VDeS~L 289 (991)
+.+.+.--+++.+......+. ..+..+.|+|+++|+.+..+||.|||+|.+.. ...||||.+|+.|+ |.|||++|
T Consensus 228 i~fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gs-ciVnEaML 306 (1160)
T KOG0209|consen 228 IAFEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGS-CIVNEAML 306 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecc-eeechhhh
Confidence 555555555666666666553 35668999999999999999999999999987 56899999999996 89999999
Q ss_pred CCCCcceecc----------------CCCCeEEeccEEe-------------cCeEEEEEEEEeccchhhHHHhhhcCCC
Q 001960 290 TGESEPVNVN----------------ALNPFLLSGTKVQ-------------NGSCKMLVTTVGMRTQWGKLMATLSEGG 340 (991)
Q Consensus 290 TGES~pv~k~----------------~~~~~l~sGt~v~-------------~g~~~~~V~~~G~~T~~g~i~~~~~~~~ 340 (991)
||||.|..|. .+..++|.||+++ ||.+.+.|++||.+|..|++++.+.-..
T Consensus 307 tGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~a 386 (1160)
T KOG0209|consen 307 TGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSA 386 (1160)
T ss_pred cCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecc
Confidence 9999999884 1345799999997 6789999999999999999999887755
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHH
Q 001960 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420 (991)
Q Consensus 341 ~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav 420 (991)
++-|.- |+-+.++ ++.+++|.+....|.+..-.... ..+=.+.|.-++.|+...+|.-||+-+
T Consensus 387 ervTaN----n~Etf~F-----ILFLlVFAiaAa~Yvwv~Gskd~--------~RsrYKL~LeC~LIlTSVvPpELPmEL 449 (1160)
T KOG0209|consen 387 ERVTAN----NRETFIF-----ILFLLVFAIAAAGYVWVEGSKDP--------TRSRYKLFLECTLILTSVVPPELPMEL 449 (1160)
T ss_pred eeeeec----cHHHHHH-----HHHHHHHHHHhhheEEEecccCc--------chhhhheeeeeeEEEeccCCCCCchhh
Confidence 543332 1222222 22333444433333332211110 012224455566677788999999999
Q ss_pred HHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHH
Q 001960 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKL 500 (991)
Q Consensus 421 ~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (991)
+++.-.+...+.|.++.|..+-.+.-.|++|.-|||||||||+..|.|..+...... .......++.+.+...
T Consensus 450 SmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~------~~~~~~~s~~p~~t~~- 522 (1160)
T KOG0209|consen 450 SMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSAD------EGALTPASKAPNETVL- 522 (1160)
T ss_pred hHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCC------cccccchhhCCchHHH-
Confidence 999999999999999999999999999999999999999999999999887542211 0011112223333333
Q ss_pred HHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHH-Hc--CC-Ch--HHHhhhcceEEEecCCCCCceEEEEEEeCC-
Q 001960 501 LLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGL-LL--GG-DF--QAERQASKIVKVEPFNSVKKQMGVVIELPE- 573 (991)
Q Consensus 501 l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~-~~--g~-~~--~~~~~~~~il~~~pF~s~~k~msviv~~~~- 573 (991)
.++.||+-....+ ...|+|.|+|.+++.. .. +- .. +..-...+|.+.+.|+|..|||+|+....+
T Consensus 523 ---vlAscHsLv~le~-----~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~ 594 (1160)
T KOG0209|consen 523 ---VLASCHSLVLLED-----KLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGP 594 (1160)
T ss_pred ---HHHHHHHHHHhcC-----cccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccC
Confidence 3344554322211 2699999999998752 11 10 00 011125778999999999999999988643
Q ss_pred ---CeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCC-----CCCCCCCC
Q 001960 574 ---GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE-----FSADAPIP 645 (991)
Q Consensus 574 ---~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~-----~~~~~~~~ 645 (991)
-.+.+.+|||||.|..+-.. ..+.+++...+|+.+|.||+|++||.+..- .+.+++..
T Consensus 595 g~s~k~~~aVKGAPEvi~~ml~d--------------vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~v 660 (1160)
T KOG0209|consen 595 GSSEKYFVAVKGAPEVIQEMLRD--------------VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDV 660 (1160)
T ss_pred CCceEEEEEecCCHHHHHHHHHh--------------CchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhh
Confidence 35788999999999876542 234577888999999999999999999743 12355788
Q ss_pred CCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc---------------------
Q 001960 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--------------------- 704 (991)
Q Consensus 646 e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~--------------------- 704 (991)
|.||+|.|++.|.-|+|+|++++|+.|++.+++++|+||||+.||.++|+++||.....
T Consensus 661 EsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~ 740 (1160)
T KOG0209|consen 661 ESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDG 740 (1160)
T ss_pred hhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCC
Confidence 99999999999999999999999999999999999999999999999999999975311
Q ss_pred --------------------eeeeCcccccCC-HHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCCh
Q 001960 705 --------------------IAIEGPEFREKS-DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDA 763 (991)
Q Consensus 705 --------------------~vi~g~~~~~~~-~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~ 763 (991)
++++|+.++.+. .+.+.++++.+.||||+.|.||..++..+++. |+.++|+|||+||+
T Consensus 741 t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~-Gy~TLMCGDGTNDV 819 (1160)
T KOG0209|consen 741 TIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKL-GYVTLMCGDGTNDV 819 (1160)
T ss_pred ceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhc-CeEEEEecCCCcch
Confidence 445566555443 34678888999999999999999999999998 99999999999999
Q ss_pred HhhhhCCeeEEecCCCcHHHH-----------------------------------------------------------
Q 001960 764 PALHEADIGLAMGIAGTEVAK----------------------------------------------------------- 784 (991)
Q Consensus 764 ~al~~Advgiamg~~g~~~ak----------------------------------------------------------- 784 (991)
.|||+||||||+= ++++.++
T Consensus 820 GALK~AhVGVALL-~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~ 898 (1160)
T KOG0209|consen 820 GALKQAHVGVALL-NNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEED 898 (1160)
T ss_pred hhhhhcccceehh-cCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhc
Confidence 9999999999975 3333100
Q ss_pred h------------hcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 001960 785 E------------SADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVN 852 (991)
Q Consensus 785 ~------------~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~n 852 (991)
+ +|.+.---.+.+++.++|+.||++.-+.-|.+.. +.-|..... .-.+.++.-..-+...|...-.
T Consensus 899 ~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQMfKI-LALN~LisA-YslSvlyldGVKfgD~QaTisG 976 (1160)
T KOG0209|consen 899 KGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQMFKI-LALNCLISA-YSLSVLYLDGVKFGDTQATISG 976 (1160)
T ss_pred ccCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHHHHH-HHHHHHHHH-HHHHHhhhcCceecchhHhHHH
Confidence 0 0111111125778889999999999876555543 333433221 1123445556778888877766
Q ss_pred HHHhHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcccc------cccCCCCcccch
Q 001960 853 MIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAV------FRLDGPDPDLIL 926 (991)
Q Consensus 853 li~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~------~~~~~~~~~~~~ 926 (991)
+++ ....+.+...+|-+.+.++.|. .+++|.-.+..+++|-..++..++++.-..... .+++..-.+...
T Consensus 977 lLl-a~cFlfISrskPLetLSkeRP~---~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~Psll 1052 (1160)
T KOG0209|consen 977 LLL-AACFLFISRSKPLETLSKERPL---PNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLL 1052 (1160)
T ss_pred HHH-HHHHhheecCCchhhHhhcCCC---CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhh
Confidence 655 3456677778999999999884 568887777777777777766665543211110 011111123467
Q ss_pred hHHHHHHHHHHHHHHH
Q 001960 927 NTLIFNTFVFCQLQRD 942 (991)
Q Consensus 927 ~t~~f~~~v~~q~~n~ 942 (991)
+|.+|..-...|+-..
T Consensus 1053 Nt~vyiisl~~QvsTF 1068 (1160)
T KOG0209|consen 1053 NTTVYIISLAQQVSTF 1068 (1160)
T ss_pred hhHHHHHHHHHHHHHh
Confidence 8888888878787653
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-59 Score=502.73 Aligned_cols=493 Identities=27% Similarity=0.400 Sum_probs=381.2
Q ss_pred HHHHHHHHHHHHhhhhcCCcEEEEEeC-CeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCccee
Q 001960 219 TSDYKQSLQFKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVN 297 (991)
Q Consensus 219 ~~~~~~~~~~~~l~~~~~~~~v~V~R~-G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~ 297 (991)
+.+.+-+-|...|.+......++++++ |..+.|++.+|+.||+|.++.||.||+||.+++|.. +||||.+||||.||-
T Consensus 85 ~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGESaPVi 163 (681)
T COG2216 85 VAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPVI 163 (681)
T ss_pred HHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCCCccee
Confidence 344444445555555444556677775 899999999999999999999999999999999975 999999999999999
Q ss_pred ccCCCC--eEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 298 VNALNP--FLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQG 375 (991)
Q Consensus 298 k~~~~~--~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~ 375 (991)
|..++. -+-.||.+++.+.++++++.-.+|.+.|+..+++.++.++||-+.-++-+ ..++.+..++.++.+..
T Consensus 164 resGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iL-----L~~LTliFL~~~~Tl~p 238 (681)
T COG2216 164 RESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTIL-----LSGLTLIFLLAVATLYP 238 (681)
T ss_pred eccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHH-----HHHHHHHHHHHHHhhhh
Confidence 987633 28899999999999999999999999999999999999999977655433 22221111111111110
Q ss_pred HhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEe
Q 001960 376 LFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICS 455 (991)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~ 455 (991)
...+..+. . -.+...++++|..+|-.+.-.++.-=..+|.|+.+-|++.++..++|..|.+|++..
T Consensus 239 --~a~y~~g~-------~-----~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliL 304 (681)
T COG2216 239 --FAIYSGGG-------A-----ASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLL 304 (681)
T ss_pred --HHHHcCCC-------C-----cCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEe
Confidence 11111010 0 113345777888899877766666666789999999999999999999999999999
Q ss_pred CccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHH
Q 001960 456 DKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEF 535 (991)
Q Consensus 456 DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~ 535 (991)
|||||+|-|.-.-.+++..+.. +. .+ +..+...++ +. -..|.-+.+++.
T Consensus 305 DKTGTIT~GnR~A~~f~p~~gv----------------~~--~~-la~aa~lsS---l~---------DeTpEGrSIV~L 353 (681)
T COG2216 305 DKTGTITLGNRQASEFIPVPGV----------------SE--EE-LADAAQLAS---LA---------DETPEGRSIVEL 353 (681)
T ss_pred cccCceeecchhhhheecCCCC----------------CH--HH-HHHHHHHhh---hc---------cCCCCcccHHHH
Confidence 9999999887666555544332 11 11 222222221 11 336788899999
Q ss_pred HHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHH
Q 001960 536 GLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNET 615 (991)
Q Consensus 536 a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~ 615 (991)
|++.+.+.+...... -....||+.+.|++++-. +++ +-.-|||.+.+....+ +.|...| +.++..
T Consensus 354 A~~~~~~~~~~~~~~-~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~----~~~g~~p------~~l~~~ 418 (681)
T COG2216 354 AKKLGIELREDDLQS-HAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVR----ERGGHIP------EDLDAA 418 (681)
T ss_pred HHHhccCCCcccccc-cceeeecceecccccccC--CCC--ceeecccHHHHHHHHH----hcCCCCC------HHHHHH
Confidence 999886654332221 346789999988877643 333 4567999999987654 2222222 356777
Q ss_pred HHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Q 001960 616 IEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR 695 (991)
Q Consensus 616 ~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~ 695 (991)
.++-++.|-..++++ .|..++|++.++|-++||.+|-+.+||+.|||.+|+||||+.||.+||+
T Consensus 419 ~~~vs~~GGTPL~V~----------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~ 482 (681)
T COG2216 419 VDEVSRLGGTPLVVV----------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA 482 (681)
T ss_pred HHHHHhcCCCceEEE----------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHH
Confidence 888899999888886 4678999999999999999999999999999999999999999999999
Q ss_pred HcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEe
Q 001960 696 ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 775 (991)
Q Consensus 696 ~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiam 775 (991)
+.|++. ..|.++|++|.++++.-|.+ |+.|+|+|||+||+|||.+||||+||
T Consensus 483 EAGVDd---------------------------fiAeatPEdK~~~I~~eQ~~-grlVAMtGDGTNDAPALAqAdVg~AM 534 (681)
T COG2216 483 EAGVDD---------------------------FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAM 534 (681)
T ss_pred HhCchh---------------------------hhhcCChHHHHHHHHHHHhc-CcEEEEcCCCCCcchhhhhcchhhhh
Confidence 999975 88999999999999999999 99999999999999999999999999
Q ss_pred cCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 776 GIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLT 822 (991)
Q Consensus 776 g~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~ 822 (991)
. +|+..|||++..|=+|.|...+.++++.|+...-.=-..-.|++.
T Consensus 535 N-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiTRGaLTTFSIA 580 (681)
T COG2216 535 N-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSIA 580 (681)
T ss_pred c-cccHHHHHhhcccccCCCccceehHhhhhhhheeecccceeeehh
Confidence 8 999999999999999999999999999999876543333344443
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=299.49 Aligned_cols=223 Identities=33% Similarity=0.535 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecc
Q 001960 208 MSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINES 287 (991)
Q Consensus 208 ~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS 287 (991)
+.+++..++..+.+++.++..+++.+...+..++|+|||++++++++||+|||+|.|++||++||||++++...+.||||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~vd~s 83 (230)
T PF00122_consen 4 FLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYVDES 83 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEEECH
T ss_pred EEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccccccccc
Confidence 34445555666667777777777766555545999999999999999999999999999999999999999335899999
Q ss_pred cCCCCCcceeccC----CCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHH
Q 001960 288 SLTGESEPVNVNA----LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLF 363 (991)
Q Consensus 288 ~LTGES~pv~k~~----~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~ 363 (991)
.+|||+.|+.|.+ .++++++||.+.+|++.++|++||.+|..|++.+...+++.+++++++.+++++.++.++.++
T Consensus 84 ~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (230)
T PF00122_consen 84 ALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILA 163 (230)
T ss_dssp HHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccc
Confidence 9999999999971 466899999999999999999999999999999999888888899999999999999888777
Q ss_pred HHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchh
Q 001960 364 FAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAA 443 (991)
Q Consensus 364 ~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~ 443 (991)
+++++++++... . ...++...+..++++++++|||+||+++++++.+++++|.++|+++|++++
T Consensus 164 ~~~~~~~~~~~~------~----------~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a 227 (230)
T PF00122_consen 164 IAILVFIIWFFN------D----------SGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSA 227 (230)
T ss_dssp HHHHHHHHCHTG------S----------TTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTH
T ss_pred cchhhhccceec------c----------cccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCccc
Confidence 776666443211 0 011345678888999999999999999999999999999999999999999
Q ss_pred hhc
Q 001960 444 CET 446 (991)
Q Consensus 444 ~E~ 446 (991)
+|+
T Consensus 228 ~E~ 230 (230)
T PF00122_consen 228 LEA 230 (230)
T ss_dssp HHH
T ss_pred ccC
Confidence 995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.3e-23 Score=216.71 Aligned_cols=97 Identities=44% Similarity=0.725 Sum_probs=91.1
Q ss_pred CcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcccc
Q 001960 648 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI 727 (991)
Q Consensus 648 ~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~ 727 (991)
+..++|.+.+.|++||+++++|+.|+++|++++|+|||+..++.++++++||...
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~------------------------- 169 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS------------------------- 169 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE-------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc-------------------------
Confidence 6889999999999999999999999999999999999999999999999999532
Q ss_pred ceEecc--ChhhH--HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCC
Q 001960 728 QVMARS--SPMDK--HTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (991)
Q Consensus 728 ~v~ar~--sP~~K--~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Ad 770 (991)
.++++. +|++| .++++.|+.+ ++.|+|+|||.||++|+++||
T Consensus 170 ~v~a~~~~kP~~k~~~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 IVFARVIGKPEPKIFLRIIKELQVK-PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEEESHETTTHHHHHHHHHHHHTCT-GGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccccccchhHHHHHHHHhcC-CCEEEEEccCHHHHHHHHhCc
Confidence 289999 99999 9999999966 669999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.2e-13 Score=152.51 Aligned_cols=289 Identities=14% Similarity=0.195 Sum_probs=211.8
Q ss_pred CchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCC------------------------
Q 001960 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE------------------------ 637 (991)
Q Consensus 582 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~------------------------ 637 (991)
|-...+.+.|+.+++. ....|++...++++++....-.-.| .|+++|||...-.
T Consensus 698 g~ad~~~eACTdfWdG-adi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWDG-ADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcCC-ceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 5567889999999974 3567999888888888877766666 4999999975210
Q ss_pred ---CC---------C-----CC-----------CCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHH
Q 001960 638 ---FS---------A-----DA-----------PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINT 689 (991)
Q Consensus 638 ---~~---------~-----~~-----------~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~t 689 (991)
+. + ++ ...-.+.+|.|++....+.|++....|+.|.++.||.+..|-.++..
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 00 0 00 11124667999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCccCCceeeeCcc--------c----------------------------ccCCHHH--------------
Q 001960 690 AKAIARECGILTDNGIAIEGPE--------F----------------------------REKSDEE-------------- 719 (991)
Q Consensus 690 a~~ia~~~gi~~~~~~vi~g~~--------~----------------------------~~~~~~~-------------- 719 (991)
.+-.|.++||...++..|+-.+ . ..++.|+
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 9999999999987764442110 0 0000011
Q ss_pred --------------------------HhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChH--hhhhCCe
Q 001960 720 --------------------------LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAP--ALHEADI 771 (991)
Q Consensus 720 --------------------------~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~--al~~Adv 771 (991)
++++..-+-.|..++|+.--++++.+|++ |++|+++|...|-.. ..-+||+
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~-GEVtcclGS~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQEN-GEVTCCLGSCANARNSCIFLKADI 1014 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHc-CcEEEEeccccccccceEEEccce
Confidence 11111112378999999999999999999 999999999998544 4578999
Q ss_pred eEEecCC------------CcHH-HHhh-----------------cCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 772 GLAMGIA------------GTEV-AKES-----------------ADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQL 821 (991)
Q Consensus 772 giamg~~------------g~~~-ak~~-----------------ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l 821 (991)
+||+..- ++.. ..++ +|+-+-....-++..+|+.+|.....+|+.+.|.+
T Consensus 1015 SialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1015 SIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred eEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 9987310 1111 1122 33333333455677889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHhc---cCCCCcccccc
Q 001960 822 TVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALA---TEPPNGDLMKR 875 (991)
Q Consensus 822 ~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~---~e~~~~~l~~~ 875 (991)
+..+...++.|++.++..+..++..+++|...+- .|.+.++ ..+|...+|.+
T Consensus 1095 q~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc--~PlL~i~tL~gk~~hkSii~m 1149 (1354)
T KOG4383|consen 1095 QAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFC--IPLLFIGTLFGKFEHKSIIIM 1149 (1354)
T ss_pred HHHHHHHHHHHHHHHHhccchhccchHHHHHHHH--HHHHHHHHHhcCCCccceEEe
Confidence 9999999999999999999999999999998875 4555555 35555555443
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.64 E-value=9e-17 Score=165.31 Aligned_cols=110 Identities=34% Similarity=0.480 Sum_probs=89.2
Q ss_pred CCChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcccccccCC
Q 001960 840 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDG 919 (991)
Q Consensus 840 ~~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~ 919 (991)
+.|+++.|+||+|+++|++|+++++.|||++++|+|||++++++++++.+|+.++.++++++++.+..++.+...++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999998888776655554321
Q ss_pred C---CcccchhHHHHHHHHHHHHHHHHhhcccc
Q 001960 920 P---DPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949 (991)
Q Consensus 920 ~---~~~~~~~t~~f~~~v~~q~~n~~~~r~~~ 949 (991)
. ......+|+.|++++++|++|.+++|+..
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~ 113 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRR 113 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSS
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 1 01234799999999999999999999843
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.2e-14 Score=128.50 Aligned_cols=125 Identities=23% Similarity=0.357 Sum_probs=106.9
Q ss_pred cEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccc
Q 001960 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (991)
Q Consensus 649 l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 728 (991)
....+.++---++=++++++|++|++. +++++.|||...+....|+-.||....
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~r------------------------- 72 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVER------------------------- 72 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceee-------------------------
Confidence 345667777778889999999999999 999999999999999999999987542
Q ss_pred eEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEe-cC-CCcHHHHhhcCEEeccCCchHHHHH
Q 001960 729 VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM-GI-AGTEVAKESADVIILDDNFSTIVTV 802 (991)
Q Consensus 729 v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiam-g~-~g~~~ak~~ad~vl~~~~~~~i~~~ 802 (991)
+++...|+.|.++++.|++. ++.|.|+|||.||.+||++||+||.. +. ...+-+.++||+++-+ ...++++
T Consensus 73 v~a~a~~e~K~~ii~eLkk~-~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 73 VFAGADPEMKAKIIRELKKR-YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred eecccCHHHHHHHHHHhcCC-CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 89999999999999999987 89999999999999999999999874 31 2234467899999866 5555554
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.3e-14 Score=128.60 Aligned_cols=87 Identities=38% Similarity=0.604 Sum_probs=71.3
Q ss_pred hcCCCceeecCCCc-eeecCChhhHHHHHHHHHcC--CChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCc
Q 001960 507 NNTGGEVVIGEGNK-TEILGTPTETAILEFGLLLG--GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGA 583 (991)
Q Consensus 507 ~~~~~~~~~~~~~~-~~~~g~p~e~All~~a~~~g--~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa 583 (991)
+|+++.+..+++.. ....|+|+|.||+.++...| .+....+..+++++.+||||+||||+++++ .++.+.+++|||
T Consensus 2 LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA 80 (91)
T PF13246_consen 2 LCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGA 80 (91)
T ss_pred CccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCC
Confidence 45666665444332 23799999999999999994 567788899999999999999999999998 334577799999
Q ss_pred hHHHHHhcccc
Q 001960 584 SEIILAACDKF 594 (991)
Q Consensus 584 ~e~il~~c~~~ 594 (991)
||.|+++|+++
T Consensus 81 ~e~il~~Ct~i 91 (91)
T PF13246_consen 81 PEVILDRCTHI 91 (91)
T ss_pred hHHHHHhcCCC
Confidence 99999999853
|
|
| >PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases [] | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.8e-14 Score=106.90 Aligned_cols=46 Identities=63% Similarity=1.076 Sum_probs=43.4
Q ss_pred cccccCCCCCCCCCcHHHHHHHHHhhcccccccccchhhhccchhhh
Q 001960 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFE 50 (991)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~f~~~~~l~~~~e 50 (991)
|+.++|+ +++||+|+|+++|||+|+++|+|++|||||++||+|+.|
T Consensus 1 yl~~~Fd-i~~Kn~s~e~l~rWR~a~~lv~N~~RRFR~~~dL~k~~e 46 (47)
T PF12515_consen 1 YLDDNFD-IPAKNSSEEALRRWRQAVGLVKNARRRFRYTADLKKREE 46 (47)
T ss_pred CCccccC-CCCCCCCHHHHHHHHHHhHHhccccceeeecccHhhHhc
Confidence 6789998 999999999999999999999999999999999998875
|
This domain binds calmodulin in a calcium-dependent fashion and has a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important.; GO: 0005516 calmodulin binding |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.7e-10 Score=125.00 Aligned_cols=69 Identities=30% Similarity=0.358 Sum_probs=61.3
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
..|...++.+.+++| +.|+++|||.||.+||+.|++|+||| ++.+.+|+.||+|..+++-.++.++|++
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 568888888877766 56899999999999999999999999 9999999999999998889999887753
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.3e-10 Score=97.20 Aligned_cols=68 Identities=25% Similarity=0.524 Sum_probs=63.9
Q ss_pred hhCCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHH
Q 001960 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVS 186 (991)
Q Consensus 117 ~~~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s 186 (991)
+..+++++++.|+++...||++++ +.+|+++||+|.++.++.+++|+.++++|+++++++|++++++|
T Consensus 2 ~~~~~~~v~~~l~t~~~~GLs~~e--v~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 2 HQLSVEEVLKRLNTSSSQGLSSEE--VEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TTSSHHHHHHHHTTBTSSBBTHHH--HHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHCcCCCCCCCHHH--HHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 346799999999999999999977 99999999999999999999999999999999999999999986
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=8.4e-10 Score=121.17 Aligned_cols=144 Identities=18% Similarity=0.230 Sum_probs=103.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eee--eCcccc--cC---------------
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAI--EGPEFR--EK--------------- 715 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~----~~-~vi--~g~~~~--~~--------------- 715 (991)
.+.+.++++|++|+++|+++++.||++...+..+.+++|+... ++ .+. .|+.+. .+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 5889999999999999999999999999999999999998531 11 111 010000 00
Q ss_pred ----------------------------------------------------CHHHHhh---hc----c-ccce------
Q 001960 716 ----------------------------------------------------SDEELSK---LI----P-KIQV------ 729 (991)
Q Consensus 716 ----------------------------------------------------~~~~~~~---~~----~-~~~v------ 729 (991)
.++++.+ .+ . +..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 0000000 00 0 0111
Q ss_pred EeccCh--hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCE--EeccCCchHHHHH
Q 001960 730 MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV--IILDDNFSTIVTV 802 (991)
Q Consensus 730 ~ar~sP--~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~--vl~~~~~~~i~~~ 802 (991)
+...+| ..|...++.+.+++| +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.||+ ++.+++-.++.++
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~ 257 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHY 257 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHH
Confidence 011222 468999999888766 56899999999999999999999999 999999999996 7778888889887
Q ss_pred HH
Q 001960 803 AK 804 (991)
Q Consensus 803 i~ 804 (991)
|+
T Consensus 258 l~ 259 (272)
T PRK15126 258 LT 259 (272)
T ss_pred HH
Confidence 74
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.3e-09 Score=119.21 Aligned_cols=144 Identities=30% Similarity=0.404 Sum_probs=107.4
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeee-Ccccc---------------------
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIE-GPEFR--------------------- 713 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~----~~-~vi~-g~~~~--------------------- 713 (991)
+.+.++++|+++++.|+++.++||+....+..+.+++|+... ++ .+.. |+.+.
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 899999999999999999999999999999999999999741 11 0000 00000
Q ss_pred ------------------------------------------------cCCH---HHHhh----hcc-ccceEeccCh--
Q 001960 714 ------------------------------------------------EKSD---EELSK----LIP-KIQVMARSSP-- 735 (991)
Q Consensus 714 ------------------------------------------------~~~~---~~~~~----~~~-~~~v~ar~sP-- 735 (991)
.... ++..+ .+. ....+.+..+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 0000 11111 111 1223333332
Q ss_pred -------hhHHHHHHHHHhhcCC---EEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 736 -------MDKHTLVKHLRTTLGE---VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 736 -------~~K~~~v~~l~~~~g~---~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
.+|...++.+.+++|- .|+++||+.||.+||+.|+.|+||| ++.+.+|+.||++...++-.+|.+++++
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 6899999999887673 4999999999999999999999999 8899999999999899999999998865
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.7e-09 Score=114.06 Aligned_cols=143 Identities=25% Similarity=0.322 Sum_probs=103.9
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeee---Cccccc--C---------------
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIE---GPEFRE--K--------------- 715 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~----~~-~vi~---g~~~~~--~--------------- 715 (991)
+.+.+.++|++++++|++++++||+....+..+++.+|+... ++ .+.. ++.+.. +
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 778999999999999999999999999999999999998532 11 1211 111100 0
Q ss_pred ------------------------CHHHHhhhccc----cce-----EeccCh--hhHHHHHHHHHhhcC---CEEEEeC
Q 001960 716 ------------------------SDEELSKLIPK----IQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAVTG 757 (991)
Q Consensus 716 ------------------------~~~~~~~~~~~----~~v-----~ar~sP--~~K~~~v~~l~~~~g---~~v~~iG 757 (991)
..+++.+.+.+ ..+ +....| ..|...++.+.+++| +.++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~G 180 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIG 180 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEC
Confidence 00111111110 111 112222 348888888877755 4689999
Q ss_pred CCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 758 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 758 DG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
|+.||.+|++.|++|+||| ++.+.+|+.||++..+++-.++.++++
T Consensus 181 D~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 181 DSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 9999999999999999999 999999999999999888899988775
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.7e-09 Score=120.16 Aligned_cols=129 Identities=20% Similarity=0.308 Sum_probs=100.5
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ce-eeeCcccccCCHHHHhhhccccceEe-ccCh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GI-AIEGPEFREKSDEELSKLIPKIQVMA-RSSP 735 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~--~~-vi~g~~~~~~~~~~~~~~~~~~~v~a-r~sP 735 (991)
++.||+.+.++.|++.|+++.++||.....+..+.+++|+..-- .. +.+|.--. .+.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg--------------~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTG--------------NVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEe--------------EecCccCCc
Confidence 57999999999999999999999999988889999999985310 00 00110000 0111 0234
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
..|.+.++.+.+++| +.+.++|||.||.+|++.|++|+|| ++.+..++.||+++...++.++..++-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 689999999887756 5799999999999999999999999 688889999999999889999887653
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=2e-09 Score=117.78 Aligned_cols=68 Identities=24% Similarity=0.285 Sum_probs=59.6
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcC--EEeccCCchHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD--VIILDDNFSTIVTVAK 804 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad--~vl~~~~~~~i~~~i~ 804 (991)
.+|...++.+.+++| +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.|| +|+.+++-.++.++++
T Consensus 189 vsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 189 VSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 468888888877766 56899999999999999999999999 99999999988 7888888889988775
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.2e-09 Score=113.51 Aligned_cols=142 Identities=25% Similarity=0.347 Sum_probs=102.4
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeC-ccc--ccCC---------------
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEG-PEF--REKS--------------- 716 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~----~~-~vi~g-~~~--~~~~--------------- 716 (991)
.+.+++.++|++|+++|++++++||++...+..+++.+++... ++ .+... ... ....
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999998632 11 12111 100 0000
Q ss_pred --------------------HHHHhhhccc--cceE-----ec--cChhhHHHHHHHHHhhcC---CEEEEeCCCCCChH
Q 001960 717 --------------------DEELSKLIPK--IQVM-----AR--SSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAP 764 (991)
Q Consensus 717 --------------------~~~~~~~~~~--~~v~-----ar--~sP~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~ 764 (991)
.+.+.+.+.+ ..+. .. ....+|...++.+.+++| +.++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0011111111 1111 11 224689999999887756 35999999999999
Q ss_pred hhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHH
Q 001960 765 ALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 802 (991)
Q Consensus 765 al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~ 802 (991)
|++.|++|+||+ ++.+.+|+.||++..+++-.++.++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 999999999999 9999999999999987777777654
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.6e-09 Score=111.22 Aligned_cols=128 Identities=16% Similarity=0.105 Sum_probs=96.8
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeeeC-cccccCCHHHHhhhccccceEeccChh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEG-PEFREKSDEELSKLIPKIQVMARSSPM 736 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~--~~vi~g-~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (991)
+++|++++.|+.+++.| ++.++||-....+..+++++|+..-- .+.+.+ ..+. .. .. ..|.
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~t------------G~-~~--~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVV------------GY-QL--RQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeE------------Ce-ee--cCcc
Confidence 67999999999999975 99999999999999999999996321 111111 0000 00 11 3578
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHH
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 806 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~g 806 (991)
.|...++.+++. |..+.++|||.||.+|++.||+|+++. +.+..+++||=.-.-.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~-~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhh-CCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 999999999877 878999999999999999999999995 6676666666544444577787777654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.5e-09 Score=125.65 Aligned_cols=68 Identities=32% Similarity=0.432 Sum_probs=59.0
Q ss_pred hHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 737 ~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
+|...++.+.+++| +.|+++|||.||.+||+.|++||||| |+.+.+|+.||+|..+++-.+|.++|++
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 56666677766655 46899999999999999999999999 9999999999999999999999988753
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.4e-09 Score=89.65 Aligned_cols=62 Identities=31% Similarity=0.487 Sum_probs=57.1
Q ss_pred HhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhh
Q 001960 127 KLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVG 190 (991)
Q Consensus 127 ~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~ 190 (991)
.++++...||+.++ +++|+++||.|+++.++.+++|+.++++|++++++++++++++|++++
T Consensus 2 ~l~~~~~~GLs~~~--v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEE--AARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 46788888999887 999999999999999988999999999999999999999999998764
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.93 E-value=8.2e-09 Score=109.93 Aligned_cols=144 Identities=24% Similarity=0.331 Sum_probs=102.2
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeCc---c-c-ccCCH------------
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEGP---E-F-REKSD------------ 717 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~----~~-~vi~g~---~-~-~~~~~------------ 717 (991)
.+.+.+.++|++++++|+.++++||++...+..+++++|+... ++ .+.... . + ..+..
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4778899999999999999999999999999999999996422 11 111111 0 0 00110
Q ss_pred ------------------------HHHhhhccc----cce-----EeccCh--hhHHHHHHHHHhhcC---CEEEEeCCC
Q 001960 718 ------------------------EELSKLIPK----IQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDG 759 (991)
Q Consensus 718 ------------------------~~~~~~~~~----~~v-----~ar~sP--~~K~~~v~~l~~~~g---~~v~~iGDG 759 (991)
+...+...+ ..+ +....| .+|...++.+.+++| +.++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 111111100 001 111122 588999999887756 569999999
Q ss_pred CCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchH----HHHHHH
Q 001960 760 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST----IVTVAK 804 (991)
Q Consensus 760 ~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~----i~~~i~ 804 (991)
.||.+|++.|++|+||| ++.+.+|+.||+|..+++-.+ +...++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 899999999999998888888 665553
|
catalyze the same reaction as SPP. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.4e-09 Score=113.55 Aligned_cols=145 Identities=26% Similarity=0.355 Sum_probs=104.2
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-ee--------------------------
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IA-------------------------- 706 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~----~~-~v-------------------------- 706 (991)
...+.+.+.+++++++++|+++++.||+....+..+..++++... ++ .+
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 345778999999999999999999999999999999999998621 11 00
Q ss_pred --------eeCcccc---c------------------------------------CCHHH-------HhhhccccceEec
Q 001960 707 --------IEGPEFR---E------------------------------------KSDEE-------LSKLIPKIQVMAR 732 (991)
Q Consensus 707 --------i~g~~~~---~------------------------------------~~~~~-------~~~~~~~~~v~ar 732 (991)
.++..+. . .+.++ +.+.+.....+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 0000000 0 00111 1111111111221
Q ss_pred -------c--ChhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHH
Q 001960 733 -------S--SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV 800 (991)
Q Consensus 733 -------~--sP~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~ 800 (991)
. ....|...++.+.+.+| +.++++||+.||.+||+.|+.|+||+ ++++..|+.||+++...+-.++.
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~ 251 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVA 251 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHH
Confidence 2 23789999999987656 57899999999999999999999999 99999999999999887778888
Q ss_pred HHH
Q 001960 801 TVA 803 (991)
Q Consensus 801 ~~i 803 (991)
++|
T Consensus 252 ~~i 254 (254)
T PF08282_consen 252 KAI 254 (254)
T ss_dssp HHH
T ss_pred HhC
Confidence 764
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.8e-08 Score=110.65 Aligned_cols=68 Identities=28% Similarity=0.387 Sum_probs=59.1
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
.+|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-.++.++++
T Consensus 198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 457777777766656 46999999999999999999999999 888888999999999989999998875
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.7e-08 Score=105.72 Aligned_cols=115 Identities=27% Similarity=0.328 Sum_probs=90.9
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCce-------eeeCcccccCCHHHHhhhccccceEe
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI-------AIEGPEFREKSDEELSKLIPKIQVMA 731 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~-------vi~g~~~~~~~~~~~~~~~~~~~v~a 731 (991)
.+++|++.+.++.++++|.+|+++||-...-+..+|+.+|+...-.. +++|. +..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~------------------v~g 137 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR------------------VVG 137 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece------------------eee
Confidence 68999999999999999999999999999999999999999753211 22332 333
Q ss_pred -ccChhhHHHHHHHHHhhcCC---EEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEecc
Q 001960 732 -RSSPMDKHTLVKHLRTTLGE---VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILD 793 (991)
Q Consensus 732 -r~sP~~K~~~v~~l~~~~g~---~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~ 793 (991)
.+..+.|...++.+.+..|. .+.++|||.||.|||+.|+.+++.+ +.+..+..|+..+-.
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~~ 201 (212)
T COG0560 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIWP 201 (212)
T ss_pred eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcCh
Confidence 34457899999888776563 5889999999999999999999885 555556666665543
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.1e-08 Score=108.44 Aligned_cols=128 Identities=21% Similarity=0.299 Sum_probs=95.9
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCce--eeeCcccccCCHHHHhhhccccceEec-cChh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI--AIEGPEFREKSDEELSKLIPKIQVMAR-SSPM 736 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~--vi~g~~~~~~~~~~~~~~~~~~~v~ar-~sP~ 736 (991)
+++|++++.++.|++.|+++.++||.....+..+.+.+|+..--.. ...+..+. ..+.+. ..+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~ 151 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLT-------------GLVEGPIVDAS 151 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEE-------------EEecCcccCCc
Confidence 5899999999999999999999999999999999999998641100 00000000 001111 1233
Q ss_pred hHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHH
Q 001960 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 802 (991)
Q Consensus 737 ~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~ 802 (991)
.|..+++.+.++.| +.+.++||+.||.+|++.|+++++++ +.+..+++||+++.++++..+..+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 47778877766534 35889999999999999999999885 678889999999999998888754
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.78 E-value=4.7e-08 Score=97.40 Aligned_cols=98 Identities=19% Similarity=0.273 Sum_probs=81.2
Q ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHh
Q 001960 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (991)
Q Consensus 668 ~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~ 747 (991)
+|++|++.|+++.++||++...+..+.+.+|+.. .+... ..|...++.+.+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------~~~~~--~~k~~~~~~~~~ 86 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------LYQGQ--SNKLIAFSDILE 86 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE---------------------------EEecc--cchHHHHHHHHH
Confidence 9999999999999999999999999999999863 22211 345666666655
Q ss_pred hcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCC
Q 001960 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795 (991)
Q Consensus 748 ~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~ 795 (991)
++| +.++|+||+.||.+|++.|+++++|. ++.+..+..||+++..+.
T Consensus 87 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 87 KLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCC
Confidence 434 57999999999999999999999998 788888999999997654
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.8e-08 Score=99.90 Aligned_cols=102 Identities=18% Similarity=0.207 Sum_probs=81.3
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHH
Q 001960 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (991)
Q Consensus 667 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~ 746 (991)
.+|+.|+++|+++.++|+.+...+..+.+.+|+.. +|.... .|...++.+.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~---------------------------~f~~~k--pkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR---------------------------FHEGIK--KKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------EEecCC--CCHHHHHHHH
Confidence 48999999999999999999999999999999963 222222 2333444444
Q ss_pred hhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchH
Q 001960 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST 798 (991)
Q Consensus 747 ~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~ 798 (991)
+++| +.++++||+.||.+|++.|++++||+ ++.+.+++.|+++...++-.+
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g 145 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHG 145 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCC
Confidence 4333 56999999999999999999999999 899999999999986555433
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.8e-07 Score=101.69 Aligned_cols=144 Identities=17% Similarity=0.132 Sum_probs=97.9
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCcc----CCc-eeeeCc--c------c--ccCCHHHHhhhc-
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT----DNG-IAIEGP--E------F--REKSDEELSKLI- 724 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~----~~~-~vi~g~--~------~--~~~~~~~~~~~~- 724 (991)
..+.+.++|++|+++|++++++||+....+..+.+++|+.. .++ .+.... . + ..++.+...+++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 44568999999999999999999999999999999999752 122 222211 1 0 001111000000
Q ss_pred ----------------------------------------------------------cc--cceE-----ecc--Chhh
Q 001960 725 ----------------------------------------------------------PK--IQVM-----ARS--SPMD 737 (991)
Q Consensus 725 ----------------------------------------------------------~~--~~v~-----ar~--sP~~ 737 (991)
.+ +.+. -.. .-..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 00 0000 001 1256
Q ss_pred HHHHHHHHHhhcC-----CEEEEeCCCCCChHhhhhCCeeEEecCCCc---HHHHhh--c-CEEeccCCchHHHHHHHH
Q 001960 738 KHTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEADIGLAMGIAGT---EVAKES--A-DVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 738 K~~~v~~l~~~~g-----~~v~~iGDG~ND~~al~~Advgiamg~~g~---~~ak~~--a-d~vl~~~~~~~i~~~i~~ 805 (991)
|...++.+.+.+| +.++++||+.||.+|++.|++|+||| ++. +..|+. | ++|..+++-+++.+++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 7777887776644 45999999999999999999999999 776 357776 4 588888889999988754
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.69 E-value=7.3e-08 Score=104.86 Aligned_cols=66 Identities=33% Similarity=0.430 Sum_probs=58.3
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 802 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~ 802 (991)
..|...++.+.+++| +.++++||+.||.+|++.|++|+||+ ++.+.+|+.||+++.+++-.++.++
T Consensus 187 ~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 187 VSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred CChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhh
Confidence 568999999887755 57999999999999999999999999 8899999999999988888887654
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.1e-07 Score=102.14 Aligned_cols=145 Identities=15% Similarity=0.105 Sum_probs=96.9
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCcc-----CCc-eeeeCcc--------c-c-cCCHHHHhhhc
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT-----DNG-IAIEGPE--------F-R-EKSDEELSKLI 724 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~-----~~~-~vi~g~~--------~-~-~~~~~~~~~~~ 724 (991)
+-+.++++|++|+++|+++++.||+....+..+++++|+.. .++ .+..... . . .++.+.+.+++
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 45678999999999999999999999999999999999842 122 2222100 0 0 01111100000
Q ss_pred --------------------------------------c-------------------------ccce-----EeccCh-
Q 001960 725 --------------------------------------P-------------------------KIQV-----MARSSP- 735 (991)
Q Consensus 725 --------------------------------------~-------------------------~~~v-----~ar~sP- 735 (991)
. .+.+ +-...|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~ 184 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLDA 184 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEecC
Confidence 0 0000 001122
Q ss_pred -hhHHHHHHHHHhhcC------CEEEEeCCCCCChHhhhhCCeeEEecCCCcHH-----HHhhcCEEeccCCchHHHHHH
Q 001960 736 -MDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV-----AKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 736 -~~K~~~v~~l~~~~g------~~v~~iGDG~ND~~al~~Advgiamg~~g~~~-----ak~~ad~vl~~~~~~~i~~~i 803 (991)
.+|...++.+.+.+| +.|+++|||.||.+||+.|++|+|||....+. .+..+|++....+-+++.+++
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 567777777766544 46999999999999999999999999333232 345799999888888998887
Q ss_pred HH
Q 001960 804 KW 805 (991)
Q Consensus 804 ~~ 805 (991)
++
T Consensus 265 ~~ 266 (271)
T PRK03669 265 DH 266 (271)
T ss_pred HH
Confidence 64
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.4e-07 Score=96.87 Aligned_cols=109 Identities=18% Similarity=0.231 Sum_probs=86.6
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHH
Q 001960 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (991)
Q Consensus 667 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~ 746 (991)
.+|+.|+++|+++.++||+....+..+++++|+.. ++. ...+|...++.+.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~---------------------------~f~--g~~~k~~~l~~~~ 105 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH---------------------------LYQ--GQSNKLIAFSDLL 105 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------eec--CCCcHHHHHHHHH
Confidence 69999999999999999999999999999999863 222 2245667777665
Q ss_pred hhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCC----chHHHHHHHH
Q 001960 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN----FSTIVTVAKW 805 (991)
Q Consensus 747 ~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~----~~~i~~~i~~ 805 (991)
+++| +.++|+||+.||.+|++.|+++++++ ++.+..+..||+++.... +..+.+.+..
T Consensus 106 ~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~ 170 (183)
T PRK09484 106 EKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLL 170 (183)
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHH
Confidence 5545 46999999999999999999999998 778888899999996432 4445554433
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.7e-07 Score=89.21 Aligned_cols=118 Identities=20% Similarity=0.301 Sum_probs=96.6
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHH
Q 001960 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (991)
Q Consensus 667 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~ 746 (991)
-.|+.|.++||++.++||++...+..=|+++||.. +..| -.+|....+.|.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~----~~qG-------------------------~~dK~~a~~~L~ 92 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH----LYQG-------------------------ISDKLAAFEELL 92 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce----eeec-------------------------hHhHHHHHHHHH
Confidence 37999999999999999999999999999999963 2222 248888888887
Q ss_pred hhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCC----chHHHHHHHHHHHHHHHHH
Q 001960 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN----FSTIVTVAKWGRSVYINIQ 814 (991)
Q Consensus 747 ~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~----~~~i~~~i~~gR~~~~~i~ 814 (991)
++++ +.|+++||..||.|+++..+.++|+. .+.+-.++.||+|+.... +..+.++|..++..++-..
T Consensus 93 ~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~~ 166 (170)
T COG1778 93 KKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEAL 166 (170)
T ss_pred HHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHHH
Confidence 7755 57999999999999999999999998 888888999999997654 4556666666666555443
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.52 E-value=9.6e-07 Score=96.98 Aligned_cols=67 Identities=22% Similarity=0.213 Sum_probs=54.2
Q ss_pred hHHHHHHHHHhhcC----CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHH----hhc-CEEe--ccCCchHHHHHHH
Q 001960 737 DKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAK----ESA-DVII--LDDNFSTIVTVAK 804 (991)
Q Consensus 737 ~K~~~v~~l~~~~g----~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak----~~a-d~vl--~~~~~~~i~~~i~ 804 (991)
+|...++.+.+.+| +.|+++||+.||.+|++.|++|++|+ |+.+..| ..| +.+. ..++-.++.++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 67777777765433 78999999999999999999999999 9998888 666 6777 4556778887764
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=6.8e-07 Score=93.71 Aligned_cols=123 Identities=22% Similarity=0.303 Sum_probs=90.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC--CceeeeCcccccCCHHHHhhhccccceEe--ccCh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEELSKLIPKIQVMA--RSSP 735 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~--~~~vi~g~~~~~~~~~~~~~~~~~~~v~a--r~sP 735 (991)
++.||+++.++.|+++ +++.++|+.....+..+.+++|+..- +.....+.. .+.+ -..|
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~----------------~i~~~~~~~p 130 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG----------------MITGYDLRQP 130 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC----------------eEECcccccc
Confidence 4589999999999999 99999999999999999999998531 101111110 0111 1247
Q ss_pred hhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCE-EeccCCchHHHHHH
Q 001960 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV-IILDDNFSTIVTVA 803 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~-vl~~~~~~~i~~~i 803 (991)
..|...++.++.. ++.+.|+|||.||.+|.+.|++|+..+ .+.+.....++. ++. ++..+...+
T Consensus 131 ~~k~~~l~~~~~~-~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l 195 (205)
T PRK13582 131 DGKRQAVKALKSL-GYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVH--TYDELLAAI 195 (205)
T ss_pred chHHHHHHHHHHh-CCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccC--CHHHHHHHH
Confidence 7898999988877 788999999999999999999999876 444444455665 443 366666554
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.42 E-value=9.1e-07 Score=92.29 Aligned_cols=118 Identities=22% Similarity=0.241 Sum_probs=83.0
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+..--...+...+-.... +. .+....|..|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~--------p~--~~~~~~~~~k~ 149 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQ--------PD--GIVRVTFDNKG 149 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEe--------cc--eeeEEccccHH
Confidence 589999999999999999999999999999999999999753111111100000000 11 11123456787
Q ss_pred HHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcC
Q 001960 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD 788 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad 788 (991)
..++.+.+++| +.+.++||+.||.+|++.|+++++++ .+....+.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 77777765534 46899999999999999999999997 44444555554
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.8e-06 Score=92.77 Aligned_cols=69 Identities=19% Similarity=0.214 Sum_probs=59.4
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcC----EEeccCCchHHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD----VIILDDNFSTIVTVAKW 805 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad----~vl~~~~~~~i~~~i~~ 805 (991)
..|...++.+.+++| +.++++||+.||.+|++.|++|++|+ ++.+..|+.|| ++...++-.++.++|++
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 478889999887766 35888999999999999999999999 88999999999 77777777888888754
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.36 E-value=8.1e-07 Score=87.35 Aligned_cols=105 Identities=23% Similarity=0.377 Sum_probs=77.2
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----eee--eCcccccCCHHHHhhhccccceEecc
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----IAI--EGPEFREKSDEELSKLIPKIQVMARS 733 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~----~vi--~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (991)
.+-||+++.+..|++.|.+|.++||--..-+..+|.++||+..+. +.. +|+-.. .+ ...-. +
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~g-fd---------~~~pt--s 155 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLG-FD---------TNEPT--S 155 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccc-cc---------cCCcc--c
Confidence 467999999999999999999999999999999999999975321 000 111000 00 00011 1
Q ss_pred ChhhHHHHHHHHHhhcC-CEEEEeCCCCCChHhhhhCCeeEEec
Q 001960 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMG 776 (991)
Q Consensus 734 sP~~K~~~v~~l~~~~g-~~v~~iGDG~ND~~al~~Advgiamg 776 (991)
...-|.++++.+++.+. +.++|||||.||.+|+..||.=|+.|
T Consensus 156 dsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 156 DSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 23579999999988644 57999999999999999988777554
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.24 E-value=8e-06 Score=86.88 Aligned_cols=126 Identities=26% Similarity=0.357 Sum_probs=85.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc---eeeeCcccccCCHHHHhhhccccceEec----
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG---IAIEGPEFREKSDEELSKLIPKIQVMAR---- 732 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~---~vi~g~~~~~~~~~~~~~~~~~~~v~ar---- 732 (991)
+++|++++.++.|++.|+++.++||.....+..+++.+|+....- .+..+.+ -.+.+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~---------------g~~~g~~~~~ 148 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS---------------GEYAGFDENE 148 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC---------------CcEECccCCC
Confidence 378999999999999999999999999999999999999963110 0000000 001111
Q ss_pred --cChhhHHHHHHHHHhhcC-CEEEEeCCCCCChHhhhh--CCeeEEecCCC-cHHHHhhcCEEeccCCchHHHHH
Q 001960 733 --SSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHE--ADIGLAMGIAG-TEVAKESADVIILDDNFSTIVTV 802 (991)
Q Consensus 733 --~sP~~K~~~v~~l~~~~g-~~v~~iGDG~ND~~al~~--Advgiamg~~g-~~~ak~~ad~vl~~~~~~~i~~~ 802 (991)
+.+..|...++.+.+++| +.++++||+.||..|.++ ++++++.|... .+.....+|+++.+ +..+.++
T Consensus 149 ~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~~ 222 (224)
T PLN02954 149 PTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLIEV 222 (224)
T ss_pred cccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHHHh
Confidence 112357788887776544 568899999999999877 56666655221 23345568999854 6666543
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.22 E-value=8.4e-06 Score=88.26 Aligned_cols=147 Identities=16% Similarity=0.190 Sum_probs=99.9
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC------c-eeeeCc-ccccC--------------
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN------G-IAIEGP-EFREK-------------- 715 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~------~-~vi~g~-~~~~~-------------- 715 (991)
..+..|...++++++++.|+.++++||+....+..+.+++++..+. + .+..+. .....
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 4567899999999999999999999999999999999999976542 1 111111 00000
Q ss_pred ----------------------------CHH-------HHhhhcc----ccce-Ee-----ccCh--hhHHHHHHHHHhh
Q 001960 716 ----------------------------SDE-------ELSKLIP----KIQV-MA-----RSSP--MDKHTLVKHLRTT 748 (991)
Q Consensus 716 ----------------------------~~~-------~~~~~~~----~~~v-~a-----r~sP--~~K~~~v~~l~~~ 748 (991)
..+ ++.+.+. ++.+ .+ ...| ..|...++.+.++
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 000 0111111 1111 11 1223 6899999999887
Q ss_pred cC---CEEEEeCCCCCChHhhhh-CCeeEEecCCCcHHHHhhcC-------EEeccCCchHHHHHHHH
Q 001960 749 LG---EVVAVTGDGTNDAPALHE-ADIGLAMGIAGTEVAKESAD-------VIILDDNFSTIVTVAKW 805 (991)
Q Consensus 749 ~g---~~v~~iGDG~ND~~al~~-Advgiamg~~g~~~ak~~ad-------~vl~~~~~~~i~~~i~~ 805 (991)
+| +.|+++||+.||.+|++. ++.|++|+ ++.+..|+.++ ++.....-+++.+++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 65 579999999999999998 67999999 88888776543 55555556777777643
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.20 E-value=7.7e-06 Score=86.41 Aligned_cols=134 Identities=16% Similarity=0.143 Sum_probs=87.7
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC---CceeeeCcccccCCHHHHhhhccccceE--ecc
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVM--ARS 733 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~---~~~vi~g~~~~~~~~~~~~~~~~~~~v~--ar~ 733 (991)
-+++||+++.++.|++.|+++.++||.....+..+.+.++.... +...++|..+... .+.-..+ ...
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~--------~p~~~~~~~~~~ 140 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHID--------WPHPCDGTCQNQ 140 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEe--------CCCCCccccccC
Confidence 47899999999999999999999999999999999888754321 1122333322110 0000000 011
Q ss_pred ChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHH--hhcCEEeccCCchHHHHHHH
Q 001960 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAK--ESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 734 sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak--~~ad~vl~~~~~~~i~~~i~ 804 (991)
....|..+++.++.. ++.+.|+|||.||.+|++.||+.+|=+ .-.+-.+ ..+.+.+ ++|..+...++
T Consensus 141 cg~~K~~~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 141 CGCCKPSLIRKLSEP-NDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CCCCHHHHHHHHhhc-CCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 135799999998876 677899999999999999999988644 2112111 1122222 45777776653
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.09 E-value=5.9e-06 Score=85.45 Aligned_cols=92 Identities=28% Similarity=0.332 Sum_probs=69.0
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChh-h--HH
Q 001960 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM-D--KH 739 (991)
Q Consensus 663 ~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~-~--K~ 739 (991)
|++++.|+.++++|++++++||+....+..+++.+|+.... ++..+....- +....++.+|. + |.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~~~~~----------~~~~~~~~~~~~~~~K~ 159 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNELFDNG----------GGIFTGRITGSNCGGKA 159 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEEECTT----------CCEEEEEEEEEEESHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEeeeecc----------cceeeeeECCCCCCcHH
Confidence 78889999999999999999999999999999999997532 1111100000 11244555554 4 99
Q ss_pred HHHHHH------HhhcCCEEEEeCCCCCChHhhh
Q 001960 740 TLVKHL------RTTLGEVVAVTGDGTNDAPALH 767 (991)
Q Consensus 740 ~~v~~l------~~~~g~~v~~iGDG~ND~~al~ 767 (991)
..++.+ +.. ...+.++|||.||.||||
T Consensus 160 ~~l~~~~~~~~~~~~-~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 160 EALKELYIRDEEDID-PDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHTHT-CCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHhhcCCC-CCeEEEEECCHHHHHHhC
Confidence 999999 233 578999999999999986
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00025 Score=83.34 Aligned_cols=98 Identities=20% Similarity=0.276 Sum_probs=75.9
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
|++|++.+.+++++++|+++.++|+-+...+..+++.+|+.+ .++.+++. .++.|+.|.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd---~Vigsd~~------------------~~~kg~~K~ 130 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD---GVFASDGT------------------TNLKGAAKA 130 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC---EEEeCCCc------------------cccCCchHH
Confidence 578999999999999999999999999999999999999832 33333221 135667776
Q ss_pred HHHHHHHhhcCCE-EEEeCCCCCChHhhhhCCeeEEecCCCcHH
Q 001960 740 TLVKHLRTTLGEV-VAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (991)
Q Consensus 740 ~~v~~l~~~~g~~-v~~iGDG~ND~~al~~Advgiamg~~g~~~ 782 (991)
+.++.. .++. +.++||..||.|+++.|+-.++++ .+...
T Consensus 131 ~~l~~~---l~~~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~l 170 (479)
T PRK08238 131 AALVEA---FGERGFDYAGNSAADLPVWAAARRAIVVG-ASPGV 170 (479)
T ss_pred HHHHHH---hCccCeeEecCCHHHHHHHHhCCCeEEEC-CCHHH
Confidence 655432 2332 678899999999999999999997 44444
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=2.8e-05 Score=82.73 Aligned_cols=128 Identities=23% Similarity=0.352 Sum_probs=87.5
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
.++.||+.+.++.|++.|+++.++||.....+..+.+..|+...-..++.+++.. .....|+--
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~kp~~~~~ 155 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLP----------------NKKPDPAPL 155 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCC----------------CCCcChHHH
Confidence 4578999999999999999999999999999999999999864322333322210 011122222
Q ss_pred HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCe-eEEe--cCC-CcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAM--GIA-GTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 739 ~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Adv-giam--g~~-g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
..+.+.++.. .+.++++||+.||+.+.+.|++ +|.+ |.. ..+.....+|+++. ++..+...+.+
T Consensus 156 ~~~~~~~~~~-~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~~~l~~ 223 (226)
T PRK13222 156 LLACEKLGLD-PEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELLPLLGL 223 (226)
T ss_pred HHHHHHcCCC-hhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHHHHHHH
Confidence 3333444333 3678999999999999999998 4444 311 23444567888884 48888877654
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.04 E-value=2.8e-05 Score=82.52 Aligned_cols=127 Identities=24% Similarity=0.369 Sum_probs=94.8
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhh
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 737 (991)
..++-|+++++++.|+++|++..++|+++...+..+.+..|+...-..++.+.+.. ...-.|..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~----------------~~KP~P~~ 150 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVP----------------PPKPDPEP 150 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCC----------------CCCcCHHH
Confidence 45678999999999999999999999999999999999999976433333322211 11234555
Q ss_pred HHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCC---eeEEecCC-CcHHHHhhcCEEeccCCchHHHHHH
Q 001960 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD---IGLAMGIA-GTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 738 K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Ad---vgiamg~~-g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
...+.+.+... .+.++||||..+|..|=++|+ ||+..|.+ +.+.....+|+++.+ +..+...+
T Consensus 151 l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l 217 (220)
T COG0546 151 LLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALL 217 (220)
T ss_pred HHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHH
Confidence 55555555443 357999999999999999998 77888743 455677779999965 77776554
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.7e-05 Score=82.95 Aligned_cols=107 Identities=16% Similarity=0.162 Sum_probs=77.9
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeeeCcccccCCHHHHhhhccccceE-eccC
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVM-ARSS 734 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~--~vi~g~~~~~~~~~~~~~~~~~~~v~-ar~s 734 (991)
..+++|++.+.++.+++.|++++++||.....+..+++.+|+..--+ .....+.. .+ .+ +. -.+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~--~~--------g~--~~~~~~~ 152 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGI--YT--------GN--IDGNNCK 152 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCE--Ee--------CC--ccCCCCC
Confidence 45689999999999999999999999999999999999999853100 11100000 00 00 00 1234
Q ss_pred hhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEec
Q 001960 735 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMG 776 (991)
Q Consensus 735 P~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg 776 (991)
++.|...++.+.++.+ +.+.++||+.+|.||++.|+.++++.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 5788888887765434 36889999999999999999999875
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.02 E-value=2.4e-05 Score=83.16 Aligned_cols=43 Identities=12% Similarity=0.143 Sum_probs=38.8
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~ 700 (991)
.+..-++++++|++|+++|++++++||+....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3455667999999999999999999999999999999999974
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.5e-05 Score=80.45 Aligned_cols=114 Identities=18% Similarity=0.180 Sum_probs=77.9
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc-cccceEec-cChh
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI-PKIQVMAR-SSPM 736 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~-~~~~v~ar-~sP~ 736 (991)
-+++|++.+.++.|++.|+++.++|+.+...+..+.+..|+...-..++.++.... .. ...... .++.++.. ....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~-~~-g~~~~~~~~~~~~~~~~~g~ 148 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFD-ND-GRHIVWPHHCHGCCSCPCGC 148 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceEC-CC-CcEEEecCCCCccCcCCCCC
Confidence 47899999999999999999999999999999999999998643223333222110 00 000000 11111111 1224
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia 774 (991)
.|.++++.++++..+.+.++|||.||..|.++||+-+|
T Consensus 149 ~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 149 CKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 69999999877534679999999999999999988664
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.3e-05 Score=81.82 Aligned_cols=97 Identities=22% Similarity=0.296 Sum_probs=70.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeeeCc-ccccCCHHHHhhhccccceE--eccC
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGP-EFREKSDEELSKLIPKIQVM--ARSS 734 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~--~vi~g~-~~~~~~~~~~~~~~~~~~v~--ar~s 734 (991)
+++|++++.++.+++.|+++.++||.....+..+++.+|+..--. ...+.. .+. .+ +. ....
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~-----------g~--~~~~~~~~ 139 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLT-----------GP--IEGQVNPE 139 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEe-----------Cc--cCCcccCC
Confidence 368999999999999999999999999999999999999863110 111000 000 00 00 1245
Q ss_pred hhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhC
Q 001960 735 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEA 769 (991)
Q Consensus 735 P~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~A 769 (991)
+..|...++.++++.| +.+.++|||.||.+|++.|
T Consensus 140 ~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 140 GECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 6889999998776533 4689999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.97 E-value=4.6e-05 Score=88.17 Aligned_cols=144 Identities=18% Similarity=0.156 Sum_probs=93.9
Q ss_pred CcccHHHHH-HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCce-------eeeCccccc------------------
Q 001960 661 MRPGVKESV-AICRSAGITVRMVTGDNINTAKAIARECGILTDNGI-------AIEGPEFRE------------------ 714 (991)
Q Consensus 661 lr~~v~~~I-~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~-------vi~g~~~~~------------------ 714 (991)
+.+...+++ +++++.|+.+++.||+.......+.++.++..++-. +..+.....
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 333344555 889999999999999999999999999998765311 111111100
Q ss_pred -----C--------------------CHH-------HHhhhcc----ccce------EeccCh--hhHHHHHHHHHhhc-
Q 001960 715 -----K--------------------SDE-------ELSKLIP----KIQV------MARSSP--MDKHTLVKHLRTTL- 749 (991)
Q Consensus 715 -----~--------------------~~~-------~~~~~~~----~~~v------~ar~sP--~~K~~~v~~l~~~~- 749 (991)
+ .++ ++.+.+. ++.+ +-...| ..|...++.|.+++
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 0 000 1111110 1111 112233 56999999998876
Q ss_pred --C---CEEEEeCCCCCChHhhhhCC-eeEEecCCCcHHHHhhc--------CEEec-cCCchHHHHHHHH
Q 001960 750 --G---EVVAVTGDGTNDAPALHEAD-IGLAMGIAGTEVAKESA--------DVIIL-DDNFSTIVTVAKW 805 (991)
Q Consensus 750 --g---~~v~~iGDG~ND~~al~~Ad-vgiamg~~g~~~ak~~a--------d~vl~-~~~~~~i~~~i~~ 805 (991)
| +.++++||+.||.+||+.|+ .||+|| |+.+..|+.+ +++.. +.+-++|.+++++
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 4 47899999999999999999 699999 8888877643 44433 3356677776643
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.95 E-value=2.7e-05 Score=82.54 Aligned_cols=130 Identities=20% Similarity=0.200 Sum_probs=83.5
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC----ceeeeCcccccCCHHHHhhhccccce--E-ec
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQV--M-AR 732 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~----~~vi~g~~~~~~~~~~~~~~~~~~~v--~-ar 732 (991)
+++||+.+.++.|++.|+++.++||-....+..+.+.+ +.... ....+|+.+... .+.-.. + .+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~--------kp~p~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITIT--------WPHPCDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEe--------ccCCcccccccc
Confidence 67999999999999999999999999999999999988 64311 111222221100 000000 0 00
Q ss_pred cChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHh--hcCEEeccCCchHHHHHH
Q 001960 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKE--SADVIILDDNFSTIVTVA 803 (991)
Q Consensus 733 ~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~--~ad~vl~~~~~~~i~~~i 803 (991)
+ ...|..+++.++.. ...+.++|||.||.+|.+.||+.++-+ .-.+.+++ .+.+.+ ++|..+...+
T Consensus 145 ~-~~~K~~~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 145 C-GCCKPSLIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred C-CCchHHHHHHhccC-CCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 1 13488888888766 667999999999999999999977632 11122122 233333 3477776654
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.89 E-value=6e-05 Score=78.99 Aligned_cols=125 Identities=19% Similarity=0.267 Sum_probs=83.9
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|++.|+++.++|+.....+..+.+..|+...-+.++...+. ...+-.|+-=.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~----------------~~~KP~~~~~~ 138 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEV----------------PRPKPAPDIVR 138 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcC----------------CCCCCChHHHH
Confidence 67899999999999999999999999999999999999986422222222211 01122222223
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE---ecC-CCcHHHHhhcCEEeccCCchHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA---MGI-AGTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia---mg~-~g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
.+++.++-. .+.++|+||+.+|..+-++|++... -|. ...+..++.+|+++.+ +..+..++
T Consensus 139 ~~~~~~~~~-~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~--~~~l~~~~ 203 (205)
T TIGR01454 139 EALRLLDVP-PEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRK--PQSLLALC 203 (205)
T ss_pred HHHHHcCCC-hhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCC--HHHHHHHh
Confidence 333333322 3679999999999999999998643 331 2223466789999854 66666544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.87 E-value=3.3e-05 Score=74.33 Aligned_cols=117 Identities=21% Similarity=0.160 Sum_probs=76.6
Q ss_pred eccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccCh
Q 001960 656 GIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (991)
Q Consensus 656 ~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (991)
.-..++++++++.+++|++.|++++++||.....+....+.+|+......++......................+++..|
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNP 99 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCH
Confidence 45668999999999999999999999999999999999999998432222222111100000000000111123345556
Q ss_pred hhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhC-CeeE
Q 001960 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA-DIGL 773 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~A-dvgi 773 (991)
..+..+.+.+... .+.+.++||+.||..|.+.+ .-+|
T Consensus 100 ~~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 100 DKLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred HHHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcCCcee
Confidence 6666666665544 56799999999999999984 3343
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00012 Score=77.69 Aligned_cols=38 Identities=16% Similarity=0.220 Sum_probs=35.6
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 001960 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (991)
Q Consensus 663 ~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~ 700 (991)
+.++++|+.|+++|++++++||+....+..+.+++|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999985
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00014 Score=79.37 Aligned_cols=137 Identities=12% Similarity=0.232 Sum_probs=88.0
Q ss_pred CCcccHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCc--cCCce-ee--eCcc-cccCC----------------
Q 001960 660 PMRPGVKESVAICRS-AGITVRMVTGDNINTAKAIARECGIL--TDNGI-AI--EGPE-FREKS---------------- 716 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~-aGi~v~mlTGD~~~ta~~ia~~~gi~--~~~~~-vi--~g~~-~~~~~---------------- 716 (991)
.+-++++++|++|++ .|+.++++||+....+..+.+.+++. ..++. +. .+.. ...++
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 445789999999998 79999999999999999888777642 22221 11 0100 00011
Q ss_pred ------------------------HHHHhhh-------ccccce-----EeccCh--hhHHHHHHHHHhhcC---CEEEE
Q 001960 717 ------------------------DEELSKL-------IPKIQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAV 755 (991)
Q Consensus 717 ------------------------~~~~~~~-------~~~~~v-----~ar~sP--~~K~~~v~~l~~~~g---~~v~~ 755 (991)
.+.+.++ .+...+ +....| .+|...++.+.+.+| +.+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 1111111 111111 111222 588888888877755 57889
Q ss_pred eCCCCCChHhhhhC----CeeEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 001960 756 TGDGTNDAPALHEA----DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 756 iGDG~ND~~al~~A----dvgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
+||+.||.+|++.+ +.||+|| ++. ..|++.+.+ ...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~~--~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLAG--VPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCCC--HHHHHHHH
Confidence 99999999999999 9999999 553 447887764 55555544
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00017 Score=77.63 Aligned_cols=43 Identities=7% Similarity=0.034 Sum_probs=38.8
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~ 701 (991)
+..-+.++++|++|+++||.+++.||........+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3456779999999999999999999999999999999999853
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00027 Score=77.51 Aligned_cols=123 Identities=18% Similarity=0.307 Sum_probs=81.9
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
.++.|++.++++.|++.|+++.++|+.+...+..+....|+...-+.++.+++. .+..| +
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~------------------~~~Kp--~ 159 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTL------------------PQKKP--D 159 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCC------------------CCCCC--C
Confidence 478899999999999999999999999999999898888885422223332221 11112 1
Q ss_pred HHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCee-EEe--cCC-CcHHHHhhcCEEeccCCchHHHHHH
Q 001960 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAM--GIA-GTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 739 ~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advg-iam--g~~-g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
...++.+.++.| +.++++||+.||..+.+.|++. +++ |-. ..+..+..+|+++. ++..+.+++
T Consensus 160 p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~ 229 (272)
T PRK13223 160 PAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGC 229 (272)
T ss_pred cHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHH
Confidence 223333322223 5799999999999999999973 333 311 12234457999884 477766543
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00029 Score=74.39 Aligned_cols=125 Identities=18% Similarity=0.203 Sum_probs=83.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|+++|+++.++|+.....+..+.+..|+...-..++.+++.. .....|+--.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~p~~~~ 145 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVE----------------HAKPDPEPVL 145 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCC----------------CCCCCcHHHH
Confidence 368999999999999999999999999999999999999864322333322210 0112233223
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee---EEecCCCcH-HHHhhcCEEeccCCchHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG---LAMGIAGTE-VAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg---iamg~~g~~-~ak~~ad~vl~~~~~~~i~~~i 803 (991)
.+.+.+.-. .+.+++|||+.+|..|-++|++- +.-|....+ .....+|+++.+ +..+.+++
T Consensus 146 ~~~~~~~~~-~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~--~~~l~~~i 210 (214)
T PRK13288 146 KALELLGAK-PEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDK--MSDLLAIV 210 (214)
T ss_pred HHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECC--HHHHHHHH
Confidence 333333322 35689999999999999999984 333411222 334568888754 77777654
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00026 Score=74.53 Aligned_cols=120 Identities=19% Similarity=0.277 Sum_probs=80.4
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|++.|+++.++|+.....+..+.+..|+...-..++.+++. .+..|. -
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~Kp~--p 144 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSL------------------AQRKPH--P 144 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCC------------------CCCCCC--h
Confidence 57899999999999999999999999999999999999986432233322221 112221 2
Q ss_pred HHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEE-e--cCCC-cHHHHhhcCEEeccCCchHHHH
Q 001960 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA-M--GIAG-TEVAKESADVIILDDNFSTIVT 801 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgia-m--g~~g-~~~ak~~ad~vl~~~~~~~i~~ 801 (991)
..+..+.+++| +.++++||+.+|..+.+.|++-.. + |-.. .+.....+|+++.+ +..+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~--~~~l~~ 211 (213)
T TIGR01449 145 DPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS--LNELPP 211 (213)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC--HHHHHh
Confidence 22222222223 568999999999999999997654 2 2111 12334568888854 665543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00054 Score=73.18 Aligned_cols=127 Identities=18% Similarity=0.201 Sum_probs=85.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|++.|+++.++|+.+...+..+-+..|+...-..++.+.+. -...-.|+-=.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~----------------~~~KP~p~~~~ 158 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTL----------------AERKPHPLPLL 158 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcC----------------CCCCCCHHHHH
Confidence 57899999999999999999999999999888888889986432333333221 01122333333
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE---ecCC-Cc-HHHHhhcCEEeccCCchHHHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA---MGIA-GT-EVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia---mg~~-g~-~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
.+.+.+.-. .+.++||||+.||..|-+.|++... -|-. .. +.....+|+++.+ +..+.+.+.|
T Consensus 159 ~~~~~l~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~--~~el~~~~~~ 226 (229)
T PRK13226 159 VAAERIGVA-PTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQ--PQLLWNPATW 226 (229)
T ss_pred HHHHHhCCC-hhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCC--HHHHHHHhcC
Confidence 444444333 4679999999999999999997642 2311 11 1234569999854 7777665544
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00058 Score=81.59 Aligned_cols=40 Identities=8% Similarity=0.179 Sum_probs=36.2
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~ 700 (991)
.-+.+.++|++|+++|+.++++||+....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3356799999999999999999999999999999999974
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00062 Score=72.31 Aligned_cols=120 Identities=18% Similarity=0.265 Sum_probs=80.7
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
-++.||+.++++.|++.|+++.++|+........+.+..|+...-..++.+.+. ....|..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~Kp~~- 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKL------------------PYSKPHP- 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccC------------------CCCCCCH-
Confidence 357899999999999999999999999999999999999986543333333221 0112222
Q ss_pred HHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCC---cHHHHhhcCEEeccCCchHHH
Q 001960 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAG---TEVAKESADVIILDDNFSTIV 800 (991)
Q Consensus 739 ~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g---~~~ak~~ad~vl~~~~~~~i~ 800 (991)
.+.+.+.+++| +.++++||..||+.+-+.|++....-..+ .+.-...+|+++.+ +..+.
T Consensus 152 -~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~--~~dl~ 216 (222)
T PRK10826 152 -EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES--LTELT 216 (222)
T ss_pred -HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC--HHHHh
Confidence 23333333324 56899999999999999999875432122 22223357887744 66554
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00062 Score=71.20 Aligned_cols=116 Identities=23% Similarity=0.408 Sum_probs=77.4
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC--CccCCceee-e-Cccc-cc--------------------
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG--ILTDNGIAI-E-GPEF-RE-------------------- 714 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~g--i~~~~~~vi-~-g~~~-~~-------------------- 714 (991)
++.+.+.+++++|++.|++++++||+....+..+.++++ +...++..+ . +... ..
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 477899999999999999999999999999999998754 222222111 1 1100 00
Q ss_pred -C---------------------C----HH---HHhhhc-------cccceEe------ccCh--hhHHHHHHHHHhhcC
Q 001960 715 -K---------------------S----DE---ELSKLI-------PKIQVMA------RSSP--MDKHTLVKHLRTTLG 750 (991)
Q Consensus 715 -~---------------------~----~~---~~~~~~-------~~~~v~a------r~sP--~~K~~~v~~l~~~~g 750 (991)
+ . ++ ++.+.+ ..+.+.. ...| .+|...++.+.+++|
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~ 176 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN 176 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC
Confidence 0 0 00 000000 1122221 1223 789999999887755
Q ss_pred ---CEEEEeCCCCCChHhhhhCCeeEEe
Q 001960 751 ---EVVAVTGDGTNDAPALHEADIGLAM 775 (991)
Q Consensus 751 ---~~v~~iGDG~ND~~al~~Advgiam 775 (991)
+.++++||+.||.+|++.+++|+||
T Consensus 177 ~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 177 GKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 4699999999999999999999997
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0025 Score=68.89 Aligned_cols=134 Identities=16% Similarity=0.202 Sum_probs=84.3
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceE-eccCh--
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVM-ARSSP-- 735 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~-ar~sP-- 735 (991)
-++|||+.+.++.|++.|+++.++||-....+..+.++.|+...+..++... +..-.+. +. +-..|
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~-L~f~~dG----------vltG~~~P~i 188 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNF-MDFDEDG----------VLKGFKGPLI 188 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeee-EEECCCC----------eEeCCCCCcc
Confidence 4679999999999999999999999999999999999999864432221110 0000000 11 10111
Q ss_pred --hhHHHHHHH-HHhhcC-----CEEEEeCCCCCChHhhhhC---CeeEEecC-CC-c----HHHHhhcCEEeccCCchH
Q 001960 736 --MDKHTLVKH-LRTTLG-----EVVAVTGDGTNDAPALHEA---DIGLAMGI-AG-T----EVAKESADVIILDDNFST 798 (991)
Q Consensus 736 --~~K~~~v~~-l~~~~g-----~~v~~iGDG~ND~~al~~A---dvgiamg~-~g-~----~~ak~~ad~vl~~~~~~~ 798 (991)
..|.+.+.. ..+.++ ..+.++|||.||++|..-. +--+..|- +. . +.-+++=|||+.+|.=..
T Consensus 189 ~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~ 268 (277)
T TIGR01544 189 HTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLE 268 (277)
T ss_pred cccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCch
Confidence 356554432 322223 5788999999999995433 11222231 11 1 225578999999987666
Q ss_pred HHHHH
Q 001960 799 IVTVA 803 (991)
Q Consensus 799 i~~~i 803 (991)
++..|
T Consensus 269 v~~~i 273 (277)
T TIGR01544 269 VANSI 273 (277)
T ss_pred HHHHH
Confidence 66544
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00071 Score=73.10 Aligned_cols=53 Identities=23% Similarity=0.332 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHhhcCCEEEEeCC----CCCChHhhhhC-CeeEEecCCCcHHHHhhcCEE
Q 001960 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEA-DIGLAMGIAGTEVAKESADVI 790 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g~~v~~iGD----G~ND~~al~~A-dvgiamg~~g~~~ak~~ad~v 790 (991)
.+|..-++.|.++ .+.|+++|| |.||.+||+.| -.|++++ ++.+..|..+.++
T Consensus 187 vsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 187 WDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred CcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 5788888888777 678999999 99999999976 5677777 8888887766544
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0019 Score=70.74 Aligned_cols=119 Identities=17% Similarity=0.249 Sum_probs=81.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|++.|+++.++|+.+...+..+-+.+|+...-..++.+++. + .|.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~----------------------~-~k~ 198 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI----------------------L-SKR 198 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC----------------------C-CCH
Confidence 56899999999999999999999999999999999999986432233333221 0 122
Q ss_pred HHHHHHHhhc---CCEEEEeCCCCCChHhhhhCCeeEE---ecCCCcH-HHHhhcCEEeccCCchHHHHHH
Q 001960 740 TLVKHLRTTL---GEVVAVTGDGTNDAPALHEADIGLA---MGIAGTE-VAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 740 ~~v~~l~~~~---g~~v~~iGDG~ND~~al~~Advgia---mg~~g~~-~ak~~ad~vl~~~~~~~i~~~i 803 (991)
...+.+.++. .+.++||||+.+|..+-++|++-.. -|....+ .....+|+++.+ +..+.+++
T Consensus 199 ~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~--~~eL~~~~ 267 (273)
T PRK13225 199 RALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLET--PSDLLQAV 267 (273)
T ss_pred HHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECC--HHHHHHHH
Confidence 2333222221 3569999999999999999997643 2311111 234568998844 77777654
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.002 Score=68.25 Aligned_cols=126 Identities=23% Similarity=0.299 Sum_probs=82.0
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc--cCCceeeeCcccccCCHHHHhhhccccceEeccChh
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~--~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (991)
.++.||+.+.++.|++.|+++.++|+-....+..+.+..|+. ..-..++.+.+.. ..+-.|+
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~----------------~~KP~p~ 149 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA----------------AGRPAPD 149 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC----------------CCCCCHH
Confidence 478999999999999999999999999999999999999986 3333344333311 0111222
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEec-CCCc---H-HHHhhcCEEeccCCchHHHHH
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG-IAGT---E-VAKESADVIILDDNFSTIVTV 802 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg-~~g~---~-~ak~~ad~vl~~~~~~~i~~~ 802 (991)
-=....+.+.-...+.++|+||+.+|..+-+.|++..+++ ..|. + .....+|+++.+ +..+..+
T Consensus 150 ~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~--~~~l~~~ 218 (220)
T TIGR03351 150 LILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDS--VADLPAL 218 (220)
T ss_pred HHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecC--HHHHHHh
Confidence 2122222221110256999999999999999999986322 1222 1 223457887744 6666543
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0022 Score=67.32 Aligned_cols=107 Identities=13% Similarity=0.125 Sum_probs=74.6
Q ss_pred CCcccHHHHHH-HHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVA-ICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~-~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
.++|++.+.|+ .+++.|++++++|+-....+..+|+..|+..... ++ |-+++.... .++ .-..|..++|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~-~i-~t~le~~~g-------g~~-~g~~c~g~~K 163 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN-LI-ASQIERGNG-------GWV-LPLRCLGHEK 163 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc-EE-EEEeEEeCC-------ceE-cCccCCChHH
Confidence 46899999995 7888999999999999999999999966543222 22 222221000 000 1123666899
Q ss_pred HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEec
Q 001960 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776 (991)
Q Consensus 739 ~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg 776 (991)
...++..-....+...+-||+.||.|||+.||.+++++
T Consensus 164 v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 164 VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 88777543221244567799999999999999999885
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0024 Score=69.45 Aligned_cols=122 Identities=13% Similarity=0.164 Sum_probs=82.0
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+...-..++.+.+.. ...-.|+-=.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~----------------~~KP~Pe~~~ 172 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVY----------------RGKPDPEMFM 172 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCC----------------CCCCCHHHHH
Confidence 568999999999999999999999999999999999999875444555554421 1122222222
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeE-EecCCCcHHHHhhcCEEeccCCchHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL-AMGIAGTEVAKESADVIILDDNFSTIV 800 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgi-amg~~g~~~ak~~ad~vl~~~~~~~i~ 800 (991)
..++.+.-. .+.++||||..+|+.+-+.|++-. ++...........+|+++.+ +..+.
T Consensus 173 ~a~~~l~~~-p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~--~~el~ 231 (260)
T PLN03243 173 YAAERLGFI-PERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR--LDDLS 231 (260)
T ss_pred HHHHHhCCC-hHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC--HHHHH
Confidence 333333322 356999999999999999999843 22212222223457888754 55554
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0026 Score=68.86 Aligned_cols=120 Identities=15% Similarity=0.125 Sum_probs=82.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|++.|+++.++|+-....+..+-+..|+...-..++.+.+.. ...-.|+--.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~----------------~~KP~p~~~~ 171 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECE----------------HAKPHPDPYL 171 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCC----------------CCCCChHHHH
Confidence 468899999999999999999999999999999999999875434455554421 1122333333
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE-e--cCCCcHHHHhhcCEEeccCCchH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-M--GIAGTEVAKESADVIILDDNFST 798 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia-m--g~~g~~~ak~~ad~vl~~~~~~~ 798 (991)
...+.+.-. .+.++|+||..+|..+-++|++-.. + |....+.....+|+++.+ +..
T Consensus 172 ~a~~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~--~~e 230 (248)
T PLN02770 172 KALEVLKVS-KDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD--YED 230 (248)
T ss_pred HHHHHhCCC-hhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc--chh
Confidence 334444333 3668999999999999999997533 2 211112233468888855 544
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0039 Score=78.05 Aligned_cols=137 Identities=17% Similarity=0.250 Sum_probs=87.0
Q ss_pred CCcccHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCC--ccCCceeee--CcccccC-------------------
Q 001960 660 PMRPGVKESVAICRS-AGITVRMVTGDNINTAKAIARECGI--LTDNGIAIE--GPEFREK------------------- 715 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~-aGi~v~mlTGD~~~ta~~ia~~~gi--~~~~~~vi~--g~~~~~~------------------- 715 (991)
.+.+++.+++++|.+ .|+.|+++||+............++ ..+++..+. |.+....
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFV 593 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHH
Confidence 366889999999999 6999999999999988887765553 222222211 1111000
Q ss_pred ----------------------CH-------HHHhhhc----c--ccceE-------eccChhhHHHHHHHHHhhcC-CE
Q 001960 716 ----------------------SD-------EELSKLI----P--KIQVM-------ARSSPMDKHTLVKHLRTTLG-EV 752 (991)
Q Consensus 716 ----------------------~~-------~~~~~~~----~--~~~v~-------ar~sP~~K~~~v~~l~~~~g-~~ 752 (991)
+. +++.+.+ . .+.+. -+..-.+|...++.+.+..+ ..
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~ 673 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDF 673 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCE
Confidence 00 0111111 0 01111 11222689999998887522 57
Q ss_pred EEEeCCCCCChHhhhhC---CeeEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 001960 753 VAVTGDGTNDAPALHEA---DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 753 v~~iGDG~ND~~al~~A---dvgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
++++||+.||.+|++.+ +.+|+|| ++ +.+|++.+.+ -..+.+++
T Consensus 674 vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~--~~eV~~~L 720 (726)
T PRK14501 674 VLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRLPS--QREVRELL 720 (726)
T ss_pred EEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeCCC--HHHHHHHH
Confidence 99999999999999986 6899998 43 5678898875 35555554
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0032 Score=68.96 Aligned_cols=122 Identities=16% Similarity=0.178 Sum_probs=80.7
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
++-||+.+.++.|++.|+++.++||.....+..+-+..|+.... +.++.+++. .+..|. .
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~------------------~~~KP~-p 161 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDV------------------PAGRPY-P 161 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcC------------------CCCCCC-h
Confidence 56789999999999999999999999999888888887765421 233333221 111231 1
Q ss_pred HHHHHHHHhhcC----CEEEEeCCCCCChHhhhhCCe---eEEecCCC------------------------cHHHHhhc
Q 001960 739 HTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADI---GLAMGIAG------------------------TEVAKESA 787 (991)
Q Consensus 739 ~~~v~~l~~~~g----~~v~~iGDG~ND~~al~~Adv---giamg~~g------------------------~~~ak~~a 787 (991)
.-+.+.+++. | +.++||||+.+|..+-+.|++ |+.-|... .+.....+
T Consensus 162 ~~~~~a~~~l-~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 240 (267)
T PRK13478 162 WMALKNAIEL-GVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGA 240 (267)
T ss_pred HHHHHHHHHc-CCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCC
Confidence 2233334333 3 469999999999999999996 44444110 12234568
Q ss_pred CEEeccCCchHHHHHH
Q 001960 788 DVIILDDNFSTIVTVA 803 (991)
Q Consensus 788 d~vl~~~~~~~i~~~i 803 (991)
|+++.+ +..+...+
T Consensus 241 ~~vi~~--~~~l~~~l 254 (267)
T PRK13478 241 HYVIDT--IADLPAVI 254 (267)
T ss_pred Ceehhh--HHHHHHHH
Confidence 888854 77777654
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.003 Score=68.56 Aligned_cols=93 Identities=20% Similarity=0.248 Sum_probs=67.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
++.||+.+.++.|+++|+++.++|+.....+..+-+..|+...- +.++.+.+. .+..|. .
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~------------------~~~KP~-p 159 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDV------------------PAGRPA-P 159 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccC------------------CCCCCC-H
Confidence 46789999999999999999999999999999999999986531 334443331 111232 1
Q ss_pred HHHHHHHHhhcC----CEEEEeCCCCCChHhhhhCCee
Q 001960 739 HTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIG 772 (991)
Q Consensus 739 ~~~v~~l~~~~g----~~v~~iGDG~ND~~al~~Advg 772 (991)
..+.+.+++. | +.++||||..+|..+-+.|++-
T Consensus 160 ~~~~~a~~~l-~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 160 WMALKNAIEL-GVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHHc-CCCCchheEEECCcHHHHHHHHHCCCe
Confidence 2233334333 3 4589999999999999999964
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0037 Score=65.82 Aligned_cols=107 Identities=15% Similarity=0.093 Sum_probs=74.5
Q ss_pred CCcccHHHHH-HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESV-AICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I-~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
+++|++.+.| +.+++.|++++++|+-...-+..+++.+|+.... .++ |.+++.. .-.++ .-..|..+.|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~~i-~t~l~~~-------~tg~~-~g~~c~g~~K 164 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-NLI-ASQMQRR-------YGGWV-LTLRCLGHEK 164 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-ceE-EEEEEEE-------EccEE-CCccCCChHH
Confidence 4589999999 5788899999999999999999999999963211 122 2222110 00000 1123666899
Q ss_pred HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEec
Q 001960 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776 (991)
Q Consensus 739 ~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg 776 (991)
...++..-........+-||+.||.|||+.|+.+++++
T Consensus 165 ~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 165 VAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred HHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 88777543211345567799999999999999999885
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0015 Score=67.97 Aligned_cols=94 Identities=18% Similarity=0.082 Sum_probs=68.8
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhh
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 737 (991)
.+++.++++++++.|++.|+++.++||.....+..+.+.+|+...-..++.+++ +..+..|+-
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~-----------------~~~KP~p~~ 166 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMED-----------------CPPKPNPEP 166 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecC-----------------CCCCcCHHH
Confidence 455778889999999999999999999999999999999998653333333332 222344544
Q ss_pred HHHHHHHHHhhcCCEEEEeCCCCCChHhhhhC
Q 001960 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 769 (991)
Q Consensus 738 K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~A 769 (991)
-..+.+.+.-. .+.++||||+.+|+.+-+.|
T Consensus 167 ~~~~~~~~~~~-~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 167 LILAAKALGVE-ACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHhCcC-cccEEEEeCCHHHHHHHHhC
Confidence 44455555444 46799999999999887654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0027 Score=68.56 Aligned_cols=69 Identities=22% Similarity=0.260 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHH-----HHh---hcC-EEeccCCchHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV-----AKE---SAD-VIILDDNFSTIVTVA 803 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~-----ak~---~ad-~vl~~~~~~~i~~~i 803 (991)
..|...|+.|+++++ +.|+++||+.||.+||..++-||.+| |+.+. ... ... +.-....-.+|.+.+
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 679999999998865 35777899999999999999999999 66655 221 122 333344445666666
Q ss_pred HH
Q 001960 804 KW 805 (991)
Q Consensus 804 ~~ 805 (991)
+|
T Consensus 243 ~~ 244 (247)
T PF05116_consen 243 QH 244 (247)
T ss_dssp HH
T ss_pred HH
Confidence 44
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0059 Score=72.31 Aligned_cols=124 Identities=15% Similarity=0.101 Sum_probs=84.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+++. -....|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v-----------------~~~~kP~--- 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQI-----------------NSLNKSD--- 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCC-----------------CCCCCcH---
Confidence 67899999999999999999999999999999999999986533344444331 1112332
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee-EEecC-CCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGI-AGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg-iamg~-~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
.+...+++...+.+.++||+.+|+.+-+.|++- |.+.. .+.+.....+|+++.+ +..+.+++..
T Consensus 390 ~~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDD--LLELKGILST 455 (459)
T ss_pred HHHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCC--HHHHHHHHHH
Confidence 122223222135699999999999999999974 33321 1222223458998854 7777766543
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0054 Score=62.23 Aligned_cols=143 Identities=22% Similarity=0.285 Sum_probs=91.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCccccc--CCHHHHhhhcccc----------
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFRE--KSDEELSKLIPKI---------- 727 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~--~~~~~~~~~~~~~---------- 727 (991)
.+-||+.++.+.|++. ...+++|-.-.+-+.++|+.+|+...+- .-+--+++. ..+++.++++.++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~-~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~gee 160 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGEL-HGTEVDLDSIAVPEEEREELLSIIDVIASLSGEE 160 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCcccc-ccccccCccccCChHHHHHHHHhcCccccccHHH
Confidence 4568999999998775 5566777778888999999999964321 111111110 0111111111111
Q ss_pred ------ceEeccChhh---------------HHHHHHHHHhhcC--CEEEEeCCCCCChHhhhhCC-e-eEEecCCCcHH
Q 001960 728 ------QVMARSSPMD---------------KHTLVKHLRTTLG--EVVAVTGDGTNDAPALHEAD-I-GLAMGIAGTEV 782 (991)
Q Consensus 728 ------~v~ar~sP~~---------------K~~~v~~l~~~~g--~~v~~iGDG~ND~~al~~Ad-v-giamg~~g~~~ 782 (991)
.+|.|..|.+ |+++++.+-+.-+ ...+++||++.|..||+.+. - |+|+.-||.+=
T Consensus 161 lfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY 240 (315)
T COG4030 161 LFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY 240 (315)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcc
Confidence 1456666644 4455554443312 34688999999999999884 2 35656689999
Q ss_pred HHhhcCEEeccCCchHHHHHHH
Q 001960 783 AKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 783 ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
|...||+.+...+...+..+|+
T Consensus 241 al~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 241 ALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccccceEEeccchhhhhHHHH
Confidence 9999999999888877776654
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0058 Score=64.69 Aligned_cols=115 Identities=15% Similarity=0.167 Sum_probs=73.9
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|+++|+++.++|+.....+...-+..|+.. ...++.+++.. ...-.|+-=.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~-~~~i~~~~~~~----------------~~KP~p~~~~ 145 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA-PEVFVTAERVK----------------RGKPEPDAYL 145 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC-ccEEEEHHHhc----------------CCCCCcHHHH
Confidence 578999999999999999999999988777777667777732 22333332210 0111222222
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee-EEecCCCc-HHHHhhcCEEecc
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGT-EVAKESADVIILD 793 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg-iamg~~g~-~~ak~~ad~vl~~ 793 (991)
...+.+.-. .+.++||||..+|+.+-+.|++- |++. .+. ......+|+++.+
T Consensus 146 ~~~~~~g~~-p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 146 LGAQLLGLA-PQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHcCCC-cccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEecc
Confidence 233333222 36799999999999999999974 4443 332 2233457887654
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.003 Score=67.21 Aligned_cols=88 Identities=19% Similarity=0.243 Sum_probs=63.1
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCC----CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChh
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGD----NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD----~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (991)
+.+++++.++.++++|+++.++|+. ...++..+.+.+|+......++.++... ...|
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~------------------~~Kp- 175 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPG------------------QYQY- 175 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCC------------------CCCC-
Confidence 4455999999999999999999998 7779999999999965333333333211 0112
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg 772 (991)
+|. ..+++. | .++|+||..||..+-+.|++-
T Consensus 176 ~~~---~~l~~~-~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 176 TKT---QWIQDK-N-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CHH---HHHHhC-C-CeEEEeCCHHHHHHHHHCCCC
Confidence 232 234443 4 478999999999999999764
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0091 Score=59.57 Aligned_cols=103 Identities=17% Similarity=0.236 Sum_probs=68.9
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHH---HHHHHc---C--CccCCceee-eCcccccCCHHHHhhhccccc
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAK---AIAREC---G--ILTDNGIAI-EGPEFREKSDEELSKLIPKIQ 728 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~---~ia~~~---g--i~~~~~~vi-~g~~~~~~~~~~~~~~~~~~~ 728 (991)
+|.+.|++++++++++++|++++++||+....+. ....++ | +.. +.++. .|..+..... .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~-g~li~~~g~~~~~~~~----------e 93 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH-GPVLLSPDRLFAALHR----------E 93 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC-ceEEEcCCcchhhhhc----------c
Confidence 5788999999999999999999999999988874 555552 3 321 12222 2222111100 0
Q ss_pred eEeccChh-hHHHHHHHHHhhc----CCEEEEeCCCCCChHhhhhCCee
Q 001960 729 VMARSSPM-DKHTLVKHLRTTL----GEVVAVTGDGTNDAPALHEADIG 772 (991)
Q Consensus 729 v~ar~sP~-~K~~~v~~l~~~~----g~~v~~iGDG~ND~~al~~Advg 772 (991)
+. ...|+ .|...++.+++.+ ...++..||+.+|+.+-++++|.
T Consensus 94 ~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 94 VI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred cc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 22 22343 4888888887732 36778899999999999887654
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0086 Score=60.89 Aligned_cols=137 Identities=16% Similarity=0.020 Sum_probs=74.8
Q ss_pred CCcEEEEEeeccC----CCcccHHHHHHHHHHCCCEEEEEcCCCHH--------HHHHHHHHcCCccCCceeeeCcc-cc
Q 001960 647 EGYTCIGIVGIKD----PMRPGVKESVAICRSAGITVRMVTGDNIN--------TAKAIARECGILTDNGIAIEGPE-FR 713 (991)
Q Consensus 647 ~~l~~lG~~~i~D----~lr~~v~~~I~~l~~aGi~v~mlTGD~~~--------ta~~ia~~~gi~~~~~~vi~g~~-~~ 713 (991)
.|.++.|-..+.+ ++-||++++++.|++.|+++.++|+.... ......+..|+.. ++.+.. ..
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~----~~~~~~~~~ 86 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDD----IYLCPHKHG 86 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCE----EEECcCCCC
Confidence 3444544433332 36899999999999999999999987641 2333344556532 111100 00
Q ss_pred cCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCC--cH--------HH
Q 001960 714 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG--TE--------VA 783 (991)
Q Consensus 714 ~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g--~~--------~a 783 (991)
. -.-..+-.|+-=..+.+.+.-. .+.+.||||..+|..+-++|++-...-..| .+ ..
T Consensus 87 ~------------~~~~~KP~p~~~~~~~~~l~~~-p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~ 153 (173)
T PRK06769 87 D------------GCECRKPSTGMLLQAAEKHGLD-LTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWA 153 (173)
T ss_pred C------------CCCCCCCCHHHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccc
Confidence 0 0000112222223333333322 356999999999999999998764422122 21 11
Q ss_pred HhhcCEEeccCCchHHHHH
Q 001960 784 KESADVIILDDNFSTIVTV 802 (991)
Q Consensus 784 k~~ad~vl~~~~~~~i~~~ 802 (991)
...+|+++.+ +..+...
T Consensus 154 ~~~~~~~~~~--~~el~~~ 170 (173)
T PRK06769 154 HIEPNYIAEN--FEDAVNW 170 (173)
T ss_pred cCCCcchhhC--HHHHHHH
Confidence 2346777643 6666543
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.017 Score=65.64 Aligned_cols=121 Identities=16% Similarity=0.185 Sum_probs=82.0
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|+++|+++.++|+.....+..+-+..||...-+.++.+++.. ...-.|+-=.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~----------------~~KP~Peifl 279 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVY----------------RGKPDPEMFI 279 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCC----------------CCCCCHHHHH
Confidence 467999999999999999999999999999999999999875433444444321 0111222223
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE-ecCCCcHHH-HhhcCEEeccCCchHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-MGIAGTEVA-KESADVIILDDNFSTIV 800 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia-mg~~g~~~a-k~~ad~vl~~~~~~~i~ 800 (991)
...+.+.-. .+.++|+||..+|+.|-+.|++-.. +. .+.+.. ...+|+++.+ +..+.
T Consensus 280 ~A~~~lgl~-Peecl~IGDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI~s--~~EL~ 338 (381)
T PLN02575 280 YAAQLLNFI-PERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVVRR--LDELS 338 (381)
T ss_pred HHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEECC--HHHHH
Confidence 333333323 4679999999999999999997533 22 222222 2358888754 65553
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.011 Score=62.60 Aligned_cols=93 Identities=18% Similarity=0.234 Sum_probs=66.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|++.|+++.++|+-+...+....+.+|+...-+.++.+.+. .+..|...
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~------------------~~~KP~~~- 154 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEE------------------GVEKPHPK- 154 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccC------------------CCCCCCHH-
Confidence 57899999999999999999999999988888888989986432333333321 12233221
Q ss_pred HHHHHHHhhcC---CEEEEeCCCC-CChHhhhhCCee
Q 001960 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIG 772 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG~-ND~~al~~Advg 772 (991)
.+...+++. | +.++++||.. +|+.+-+.|++-
T Consensus 155 ~~~~~~~~~-~~~~~~~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 155 IFYAALKRL-GVKPEEAVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred HHHHHHHHc-CCChhhEEEECCChHHHHHHHHHCCCE
Confidence 122233322 3 5799999998 999999999874
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.01 Score=63.94 Aligned_cols=67 Identities=18% Similarity=0.178 Sum_probs=50.1
Q ss_pred ccChhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhC--------CeeEEecCCCcHHHHhhcCEEeccCCchHHH
Q 001960 732 RSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEA--------DIGLAMGIAGTEVAKESADVIILDDNFSTIV 800 (991)
Q Consensus 732 r~sP~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~A--------dvgiamg~~g~~~ak~~ad~vl~~~~~~~i~ 800 (991)
+..+.+|...++.+.++++ ..++++||+.||.+|++.+ ..|++|+ .| ..+..|++++.+ ...+.
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~~--~~~v~ 236 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLTG--PQQVL 236 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCCC--HHHHH
Confidence 3445788888888776645 4689999999999999999 5888885 33 235678998864 66666
Q ss_pred HHH
Q 001960 801 TVA 803 (991)
Q Consensus 801 ~~i 803 (991)
+.+
T Consensus 237 ~~L 239 (244)
T TIGR00685 237 EFL 239 (244)
T ss_pred HHH
Confidence 555
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.007 Score=64.40 Aligned_cols=87 Identities=20% Similarity=0.258 Sum_probs=62.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCC----HHHHHHHHHHcCCc--cCCceeeeCcccccCCHHHHhhhccccceEecc
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDN----INTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~----~~ta~~ia~~~gi~--~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (991)
.+.|++++.++.+++.|+++.++||+. ..++..+.+..|+. .....++.|...
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 467789999999999999999999964 66999999999994 221222222210
Q ss_pred ChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee
Q 001960 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (991)
Q Consensus 734 sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg 772 (991)
.-.+|.. .+++. | .++++||..+|..+-+.|++-
T Consensus 173 ~K~~K~~---~l~~~-~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 173 GQYTKTQ---WLKKK-N-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCCHHH---HHHhc-C-CeEEEcCCHHHHHHHHHcCCc
Confidence 0134444 34433 4 488999999999999999865
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.0096 Score=61.87 Aligned_cols=95 Identities=11% Similarity=0.176 Sum_probs=66.5
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH-
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K- 738 (991)
++.||+.+++++|+++|+++.++|+-+...+..+.+.+|+...-+.++..++. ....|...
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~------------------~~~KP~~~~ 153 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAV------------------RAYKPAPQV 153 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhc------------------CCCCCCHHH
Confidence 46899999999999999999999999999999999999985432233333221 11233211
Q ss_pred -HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeE
Q 001960 739 -HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 739 -~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgi 773 (991)
..+.+.+.-. .+.++++||+.+|+.+-+.|++-.
T Consensus 154 ~~~~~~~~~~~-p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 154 YQLALEALGVP-PDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHhCCC-hhhEEEEeCCHHHHHHHHHCCCcE
Confidence 2222223222 356899999999999999888753
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.015 Score=56.00 Aligned_cols=90 Identities=21% Similarity=0.223 Sum_probs=63.1
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCC--------HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceE
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDN--------INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVM 730 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~--------~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 730 (991)
-++.|++.++++.|+++|+++.++|+.. ...+.++.+.+|+... ...+.+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~--------------------- 81 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID-VLYACP--------------------- 81 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE-EEEECC---------------------
Confidence 4678999999999999999999999998 7788888898888521 011111
Q ss_pred eccChhhHHHHHHHHHhhc----CCEEEEeCC-CCCChHhhhhCCee
Q 001960 731 ARSSPMDKHTLVKHLRTTL----GEVVAVTGD-GTNDAPALHEADIG 772 (991)
Q Consensus 731 ar~sP~~K~~~v~~l~~~~----g~~v~~iGD-G~ND~~al~~Advg 772 (991)
....| |.++++.+.++. .+.++|+|| ..+|..+-+.|++-
T Consensus 82 ~~~KP--~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 82 HCRKP--KPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred CCCCC--ChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 01122 233333333332 367999999 59999999988764
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.021 Score=58.41 Aligned_cols=127 Identities=17% Similarity=0.130 Sum_probs=70.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~---------------~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~ 724 (991)
.+.||+.+++++|++.|+++.++|..+. .....+-+..|+.-. .++.......
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~--~i~~~~~~~~---------- 96 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD--GIYYCPHHPE---------- 96 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc--eEEECCCCCC----------
Confidence 3579999999999999999999998762 112223344555211 1111100000
Q ss_pred cccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE-ecCCCcH---HHHhhc--CEEeccCCchH
Q 001960 725 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-MGIAGTE---VAKESA--DVIILDDNFST 798 (991)
Q Consensus 725 ~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia-mg~~g~~---~ak~~a--d~vl~~~~~~~ 798 (991)
+..-..+-.|+--..+.+.+.-. .+.++||||+.+|+.+-+.|++..- +. .|.. .....+ |+++.+ +..
T Consensus 97 -~~~~~~KP~p~~~~~~~~~l~~~-~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii~~--l~e 171 (181)
T PRK08942 97 -DGCDCRKPKPGMLLSIAERLNID-LAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVLDS--LAD 171 (181)
T ss_pred -CCCcCCCCCHHHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceeecC--HHH
Confidence 00001122233323334433322 3679999999999999999997422 22 2221 122335 777744 766
Q ss_pred HHHHH
Q 001960 799 IVTVA 803 (991)
Q Consensus 799 i~~~i 803 (991)
+.+++
T Consensus 172 l~~~l 176 (181)
T PRK08942 172 LPQAL 176 (181)
T ss_pred HHHHH
Confidence 66554
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.0068 Score=62.09 Aligned_cols=92 Identities=12% Similarity=0.182 Sum_probs=61.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.++++.|+++|+++.++|+... +..+.+.+|+...-+.++.+.+. .+..|. ..
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~------------------~~~kp~-p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEI------------------KKGKPD-PE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhc------------------CCCCCC-hH
Confidence 5789999999999999999999997532 45677888886433334433321 122232 11
Q ss_pred HHHHHHHhh--cCCEEEEeCCCCCChHhhhhCCee
Q 001960 740 TLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIG 772 (991)
Q Consensus 740 ~~v~~l~~~--~g~~v~~iGDG~ND~~al~~Advg 772 (991)
.+-+.+++. ..+.++||||..+|+.+-+.|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 122223322 024689999999999999999875
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.014 Score=62.15 Aligned_cols=94 Identities=12% Similarity=0.097 Sum_probs=66.7
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|+++|+++.++|+-+...+...-+..|+...-..++.+.+. .+..|. -
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~------------------~~~KP~--p 152 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTF------------------GYPKED--Q 152 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeC------------------CCCCCC--H
Confidence 67899999999999999999999999988888888888886432233333221 122231 2
Q ss_pred HHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeE
Q 001960 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgi 773 (991)
.+.+...+++| +.++++||..+|+.+-+.|++..
T Consensus 153 ~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 153 RLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 23333222223 56999999999999999999963
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.016 Score=59.07 Aligned_cols=95 Identities=17% Similarity=0.180 Sum_probs=63.5
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|+++|+++.++|+-.... ..+..++|+...-..++.+.+.. ...-.|+-=.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~----------------~~KP~~~~~~ 147 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVG----------------RGKPDPDIYL 147 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCC----------------CCCCCHHHHH
Confidence 678999999999999999999999988877 55555688864323333332210 1111222223
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg 772 (991)
.+.+.+.-. .+.++++||...|+.+-+++++-
T Consensus 148 ~~~~~~~~~-~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 148 LALKKLGLK-PEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHcCCC-cceEEEEcCCHHHHHHHHHcCCE
Confidence 333333323 46799999999999998888763
|
HAD subfamilies caused by an overly broad single model. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.013 Score=57.92 Aligned_cols=99 Identities=22% Similarity=0.225 Sum_probs=71.7
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC----CccC----Ccee--eeCcccccCCHHHHhhhccccce
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG----ILTD----NGIA--IEGPEFREKSDEELSKLIPKIQV 729 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~g----i~~~----~~~v--i~g~~~~~~~~~~~~~~~~~~~v 729 (991)
.++|+.++.++.+++.++.++++|+-...-...+-...+ |..- ++.. .+|...- +
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i---------------~ 137 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSI---------------K 137 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceee---------------e
Confidence 468999999999999999999999988777777777665 2110 0001 1111100 1
Q ss_pred EeccCh--hhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE
Q 001960 730 MARSSP--MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (991)
Q Consensus 730 ~ar~sP--~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia 774 (991)
....+| .+|...|+.+++. .+.+.++|||+.|.+|-+.+|+=+|
T Consensus 138 ~~~ds~fG~dK~~vI~~l~e~-~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 138 YTDDSQFGHDKSSVIHELSEP-NESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cCCccccCCCcchhHHHhhcC-CceEEEecCCcccccHhhhhhhHhh
Confidence 111122 5899999999988 8889999999999999998888774
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.019 Score=60.82 Aligned_cols=120 Identities=14% Similarity=0.122 Sum_probs=76.2
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH-
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K- 738 (991)
++.||+.+.++.|++. +++.++|+-....+..+.+..|+...-+.++.+.+. ....|...
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~------------------~~~KP~~~~ 157 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDA------------------GIQKPDKEI 157 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCcc------------------CCCCCCHHH
Confidence 5689999999999999 999999999999999999999986432233332221 11123221
Q ss_pred -HHHHHHH-HhhcCCEEEEeCCCC-CChHhhhhCCeeE-EecC-CCcHHHHhhcCEEeccCCchHHHH
Q 001960 739 -HTLVKHL-RTTLGEVVAVTGDGT-NDAPALHEADIGL-AMGI-AGTEVAKESADVIILDDNFSTIVT 801 (991)
Q Consensus 739 -~~~v~~l-~~~~g~~v~~iGDG~-ND~~al~~Advgi-amg~-~g~~~ak~~ad~vl~~~~~~~i~~ 801 (991)
...++.+ .-. .+.+++|||+. +|+.+-+.+++-. ...- ...+.....+|+++.+ +..+..
T Consensus 158 ~~~~~~~~~~~~-~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~--~~el~~ 222 (224)
T TIGR02254 158 FNYALERMPKFS-KEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRS--LEELYE 222 (224)
T ss_pred HHHHHHHhcCCC-chheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECC--HHHHHh
Confidence 2233333 212 35699999998 8999999999632 2221 1121222356777643 665554
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.013 Score=65.26 Aligned_cols=109 Identities=13% Similarity=-0.001 Sum_probs=75.8
Q ss_pred ccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChh
Q 001960 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (991)
Q Consensus 657 i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (991)
..+++.|++.+.++.|++.|+++.++||.....+..+.+.+|+....-..+.|.+. ....+++. --.+-.|+
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~---~~~~~~~~-----~~~kp~p~ 255 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPP---DMHFQREQ-----GDKRPDDV 255 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcc---hhhhcccC-----CCCCCcHH
Confidence 57899999999999999999999999999999999999999886311011111110 00000000 01244566
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeE
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgi 773 (991)
-+...++.+.....+.++|+||..+|+.+-+.|++-.
T Consensus 256 ~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 256 VKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 7777766653311378999999999999999999874
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.055 Score=61.44 Aligned_cols=64 Identities=22% Similarity=0.271 Sum_probs=48.1
Q ss_pred hhHHHHHHHHHhhcC-----C-EEEEeCCCCCChHhhhh-----CCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG-----E-VVAVTGDGTNDAPALHE-----ADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g-----~-~v~~iGDG~ND~~al~~-----Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
.+|...|+.+.+.+| . .++++||+.||..|++. +++||+|| +|... -.|++.+.+ -..+...++
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~d--p~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLRD--PSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcCC--HHHHHHHHH
Confidence 499999999887755 1 25899999999999996 68999999 55432 357888755 666665553
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.027 Score=59.70 Aligned_cols=121 Identities=15% Similarity=0.151 Sum_probs=76.4
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|+ +|+++.++|......+...-+..|+...-+.++.+.+. ....|.. .
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~------------------~~~KP~p-~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQV------------------GVAKPDV-A 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECcc------------------CCCCCCH-H
Confidence 46899999999999 68999999999988888888888885422233322221 0112321 1
Q ss_pred HHHHHHHhhcC----CEEEEeCCCC-CChHhhhhCCeeE-EecCCCcH-HHHhhcCEEeccCCchHHHHHH
Q 001960 740 TLVKHLRTTLG----EVVAVTGDGT-NDAPALHEADIGL-AMGIAGTE-VAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 740 ~~v~~l~~~~g----~~v~~iGDG~-ND~~al~~Advgi-amg~~g~~-~ak~~ad~vl~~~~~~~i~~~i 803 (991)
-+...+++. | +.+++|||+. +|+.+-+.|++-. .....+.+ .....+|+++.+ +..+..++
T Consensus 155 ~~~~~~~~~-~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~--~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQM-GNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSS--LSELEQLL 222 (224)
T ss_pred HHHHHHHHc-CCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECC--HHHHHHHH
Confidence 222223322 3 4699999998 7999999999853 33211211 111247888744 77766544
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.013 Score=59.87 Aligned_cols=92 Identities=17% Similarity=0.216 Sum_probs=62.1
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
-++.||+.+.++.|++.|+++.++|+. ..+..+.+.+|+...-..++.+.+. .+..|..
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~------------------~~~kp~~- 145 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEV------------------KEGKPHP- 145 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhC------------------CCCCCCh-
Confidence 367999999999999999999999987 5677788888885422222222211 1123322
Q ss_pred HHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCee
Q 001960 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (991)
Q Consensus 739 ~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advg 772 (991)
.+.+...+++| +.+++|||+.+|+.+-+.|++.
T Consensus 146 -~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 146 -ETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred -HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 12222222213 5688999999999999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.043 Score=55.59 Aligned_cols=113 Identities=11% Similarity=0.088 Sum_probs=72.7
Q ss_pred cEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcccc
Q 001960 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGD-NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI 727 (991)
Q Consensus 649 l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD-~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~ 727 (991)
.......+-+-++.||+.+.++.|+++|+++.++|+- ....+..+...+|+..... .. .+...+..
T Consensus 34 ~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~------~~------~~~~~Fd~- 100 (174)
T TIGR01685 34 SIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK------TV------PMHSLFDD- 100 (174)
T ss_pred CeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC------cc------cHHHhcee-
Confidence 3455556667788999999999999999999999976 8889999999999851100 00 00000000
Q ss_pred ceEeccChhhH--HHHHHHHHhhc-----CCEEEEeCCCCCChHhhhhCCeeEE
Q 001960 728 QVMARSSPMDK--HTLVKHLRTTL-----GEVVAVTGDGTNDAPALHEADIGLA 774 (991)
Q Consensus 728 ~v~ar~sP~~K--~~~v~~l~~~~-----g~~v~~iGDG~ND~~al~~Advgia 774 (991)
.+.+...+..| ..+.+.+.+.. .+.++|+||...|+.+-++|++-..
T Consensus 101 iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i 154 (174)
T TIGR01685 101 RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSC 154 (174)
T ss_pred eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEE
Confidence 02221111112 23344444321 2579999999999999999988654
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.012 Score=59.20 Aligned_cols=98 Identities=20% Similarity=0.270 Sum_probs=68.5
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhh
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 737 (991)
..++.|++.+.++.|++.|++++++|+..........+.+|+...-..++...+... ....|+-
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~----------------~Kp~~~~ 138 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGS----------------RKPDPDA 138 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSS----------------STTSHHH
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhh----------------hhhHHHH
Confidence 446789999999999999999999999999999999999998743223333322110 1111222
Q ss_pred HHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee
Q 001960 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (991)
Q Consensus 738 K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg 772 (991)
=..+++.+.-. .+.+++|||+..|+.+-+.|++-
T Consensus 139 ~~~~~~~~~~~-p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 139 YRRALEKLGIP-PEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHTSS-GGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHcCCC-cceEEEEeCCHHHHHHHHHcCCe
Confidence 22333333322 46799999999999999998865
|
... |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.03 Score=64.51 Aligned_cols=116 Identities=17% Similarity=0.148 Sum_probs=73.9
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH-HcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR-ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~-~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
++.||+.+.++.|++.|+++.++|+.....+....+ ..|+...-+.++.+++.. ...-.|+-=
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~----------------~~KP~p~~~ 156 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVE----------------KGKPSPDIF 156 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcC----------------CCCCCHHHH
Confidence 467999999999999999999999999888877665 678754333444433311 111122222
Q ss_pred HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE-ecCCCc--HHHHhhcCEEecc
Q 001960 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-MGIAGT--EVAKESADVIILD 793 (991)
Q Consensus 739 ~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia-mg~~g~--~~ak~~ad~vl~~ 793 (991)
....+.+.-. .+.++|+||+.+|+.+-+.|++... +. .+. +.....+|.++.+
T Consensus 157 ~~a~~~lgv~-p~~~l~VGDs~~Di~aA~~aGi~~I~v~-~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 157 LEAAKRLNVE-PSNCLVIEDSLPGVMAGKAAGMEVIAVP-SIPKQTHLYSSADEVINS 212 (382)
T ss_pred HHHHHHcCCC-hhHEEEEeCCHHHHHHHHHcCCEEEEEC-CCCcchhhccCccEEeCC
Confidence 2333333222 3679999999999999999997633 32 222 2233446666543
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.038 Score=61.06 Aligned_cols=122 Identities=16% Similarity=0.133 Sum_probs=74.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC-C-ceeeeCcccccCCHHHHhhhccccceEeccChhh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD-N-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~-~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 737 (991)
++.||+.+.++.|++.|+++.++|+-+......+-+..+.... . -.++.+.+.. ..+-.|+-
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~----------------~~KP~p~~ 207 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP----------------KKKPDPDI 207 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC----------------CCCCCHHH
Confidence 5789999999999999999999999988888777665532211 1 0122222210 01122222
Q ss_pred HHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcH--HHHhhcCEEeccCCchHHH
Q 001960 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE--VAKESADVIILDDNFSTIV 800 (991)
Q Consensus 738 K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~--~ak~~ad~vl~~~~~~~i~ 800 (991)
=..+.+.+.-. .+.++||||+.+|+.+-+.|++....-..|.. .....+|+++.+ +..+.
T Consensus 208 ~~~a~~~~~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~--~~~l~ 269 (286)
T PLN02779 208 YNLAAETLGVD-PSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC--LGDVP 269 (286)
T ss_pred HHHHHHHhCcC-hHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC--hhhcc
Confidence 23333333322 35699999999999999999977543223321 112358888744 54444
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.045 Score=58.01 Aligned_cols=112 Identities=23% Similarity=0.355 Sum_probs=74.3
Q ss_pred CCcccHHHHHHHH--HHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccc-cceEeccCh-
Q 001960 660 PMRPGVKESVAIC--RSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK-IQVMARSSP- 735 (991)
Q Consensus 660 ~lr~~v~~~I~~l--~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~-~~v~ar~sP- 735 (991)
|+.|+.++.++.+ ++.|+.+.++|.-|..-...+-+.-|+...-..+.+.+..-+-. -.-.+.+. ..-|.+|.|
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~--G~l~v~pyh~h~C~~C~~N 148 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDAD--GRLRVRPYHSHGCSLCPPN 148 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCC--ceEEEeCccCCCCCcCCCc
Confidence 6788999999999 56899999999999999999999999864333344433211000 00000010 012445555
Q ss_pred hhHHHHHHHHHhh---cC---CEEEEeCCCCCC-hHhhh--hCCeeE
Q 001960 736 MDKHTLVKHLRTT---LG---EVVAVTGDGTND-APALH--EADIGL 773 (991)
Q Consensus 736 ~~K~~~v~~l~~~---~g---~~v~~iGDG~ND-~~al~--~Advgi 773 (991)
.=|..+++.+++. .| +.|.++|||.|| +|+++ .+|+-+
T Consensus 149 mCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 149 MCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVF 195 (234)
T ss_pred cchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEe
Confidence 4799999988765 13 689999999999 55543 455544
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.044 Score=54.30 Aligned_cols=89 Identities=18% Similarity=0.267 Sum_probs=57.8
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
+..+|+.+.++.|++.|+++.++|+-....+....+.. +...-..++...+ +. ..| +.
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~-----------------~~--~Kp--~~ 121 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDE-----------------FG--AKP--EP 121 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCC-----------------CC--CCc--CH
Confidence 34579999999999999999999999999888887775 4322111221111 11 122 12
Q ss_pred HHHHHHHhhcC--CEEEEeCCCCCChHhhhhCC
Q 001960 740 TLVKHLRTTLG--EVVAVTGDGTNDAPALHEAD 770 (991)
Q Consensus 740 ~~v~~l~~~~g--~~v~~iGDG~ND~~al~~Ad 770 (991)
.....+.+++| ..++++||..+|..+-+.|+
T Consensus 122 ~~~~~~~~~~~~~~~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 122 EIFLAALESLGLPPEVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHHcCCCCCEEEEeCCHHHHHHHHHcc
Confidence 23333222223 26899999999999887764
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.14 Score=64.68 Aligned_cols=45 Identities=18% Similarity=0.231 Sum_probs=35.6
Q ss_pred CCcccHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHc---CCccCCc
Q 001960 660 PMRPGVKESVAIC-RSAGITVRMVTGDNINTAKAIAREC---GILTDNG 704 (991)
Q Consensus 660 ~lr~~v~~~I~~l-~~aGi~v~mlTGD~~~ta~~ia~~~---gi~~~~~ 704 (991)
.+-++..+++++| ++.|+.|+++||+...+.......+ ++..+++
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG 664 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHG 664 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCC
Confidence 5567899999997 7789999999999999998887553 4444443
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.13 Score=50.54 Aligned_cols=110 Identities=17% Similarity=0.267 Sum_probs=77.0
Q ss_pred HHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Q 001960 616 IEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR 695 (991)
Q Consensus 616 ~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~ 695 (991)
.+.+..+|++.+.+- + |-|+++.= ....-|++++=+.+++++|+++.++|.-++..+...+.
T Consensus 20 ~~~L~~~Gikgvi~D---l-------------DNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~ 81 (175)
T COG2179 20 PDILKAHGIKGVILD---L-------------DNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAE 81 (175)
T ss_pred HHHHHHcCCcEEEEe---c-------------cCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhh
Confidence 356778899988763 2 22333321 34566888999999999999999999999999999999
Q ss_pred HcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhh--cCCEEEEeCCCC-CChHhhhhCCe
Q 001960 696 ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTT--LGEVVAVTGDGT-NDAPALHEADI 771 (991)
Q Consensus 696 ~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~--~g~~v~~iGDG~-ND~~al~~Adv 771 (991)
.+|+.- ++--..|.-+ .+-+++++. ..+.|+||||-. .|+-+=+.|++
T Consensus 82 ~l~v~f---------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 82 KLGVPF---------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred hcCCce---------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 999963 3333345443 455666654 136899999984 47666555543
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.03 Score=55.36 Aligned_cols=95 Identities=17% Similarity=-0.003 Sum_probs=67.2
Q ss_pred ccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhccccceEeccCh
Q 001960 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (991)
Q Consensus 657 i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (991)
..-++|||+.+.++.|+ .++++.++|.-+...+..+-+.+|+...- ..++.+++.. +..|
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~------------------~~KP 102 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECV------------------FVKG 102 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECcccc------------------ccCC
Confidence 34467999999999999 57999999999999999999999884321 2334333311 1123
Q ss_pred hhHHHHHHHHHhh--cCCEEEEeCCCCCChHhhhhCCeeEE
Q 001960 736 MDKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIGLA 774 (991)
Q Consensus 736 ~~K~~~v~~l~~~--~g~~v~~iGDG~ND~~al~~Advgia 774 (991)
. +.+.++.. ..+.+.++||..+|..+-++|+|-|.
T Consensus 103 ~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 103 K----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred e----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 2 34444332 13679999999999999888876663
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.15 Score=52.09 Aligned_cols=37 Identities=11% Similarity=0.177 Sum_probs=33.9
Q ss_pred cHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 001960 664 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (991)
Q Consensus 664 ~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~ 700 (991)
.+.+.+.+|+++|+.|+.+|.-....-...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678899999999999999999999999999999986
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.052 Score=53.51 Aligned_cols=97 Identities=26% Similarity=0.354 Sum_probs=60.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~---------------~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~ 724 (991)
++.||+.++++.|++.|+++.++|..+. ..+..+.+.+|+... ...........
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~---------- 95 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GVLFCPHHPAD---------- 95 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EEEECCCCCCC----------
Confidence 4789999999999999999999998762 455667778887521 00110000000
Q ss_pred cccceEeccChhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeE
Q 001960 725 PKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 725 ~~~~v~ar~sP~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgi 773 (991)
.... ..| |.++.+...++.| +.++||||...|..+-+.+++-.
T Consensus 96 ---~~~~-~KP--~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 96 ---NCSC-RKP--KPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ---CCCC-CCC--CHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 0000 123 2333333333324 56999999999999998887753
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.077 Score=53.73 Aligned_cols=86 Identities=20% Similarity=0.238 Sum_probs=60.8
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhh
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~-~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 737 (991)
..+-|+++++++.|++.|+++.++|+.+ ...+..+.+.+|+.. ......|..
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~---------------------------~~~~~KP~p 94 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV---------------------------LPHAVKPPG 94 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE---------------------------EcCCCCCCh
Confidence 3678999999999999999999999988 677788888888742 111123322
Q ss_pred HHHHHHHHHhh--cCCEEEEeCCCC-CChHhhhhCCee
Q 001960 738 KHTLVKHLRTT--LGEVVAVTGDGT-NDAPALHEADIG 772 (991)
Q Consensus 738 K~~~v~~l~~~--~g~~v~~iGDG~-ND~~al~~Advg 772 (991)
. .+...+++. ..+.++||||.. .|..+-+.|++-
T Consensus 95 ~-~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 95 C-AFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred H-HHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 1 222223322 035699999998 799999999874
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.082 Score=53.86 Aligned_cols=125 Identities=19% Similarity=0.171 Sum_probs=65.6
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcc
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP 725 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~---------------~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~ 725 (991)
+.||+.++++.|+++|+++.++|.-+. .....+..+.|+.-. .++.......-. .++ .
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~i~~~~~~~~~~-~~~----~ 99 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLD--GIYYCPHHPEGV-EEF----R 99 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCcc--EEEECCCCCccc-ccc----c
Confidence 578999999999999999999998763 111223333443211 111000000000 000 0
Q ss_pred ccceEeccChhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeE--EecCCCcH---HHHhhcCEEeccCCch
Q 001960 726 KIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL--AMGIAGTE---VAKESADVIILDDNFS 797 (991)
Q Consensus 726 ~~~v~ar~sP~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgi--amg~~g~~---~ak~~ad~vl~~~~~~ 797 (991)
.-.....|.- ..+...+++. | +.++||||..+|+.+-++|++.. ... .|.. .....+|+++.+ +.
T Consensus 100 --~~~~~~KP~p-~~~~~a~~~~-~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~~~~ad~~i~~--~~ 172 (176)
T TIGR00213 100 --QVCDCRKPKP-GMLLQARKEL-HIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEAENIADWVLNS--LA 172 (176)
T ss_pred --CCCCCCCCCH-HHHHHHHHHc-CcChhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCcccccccccCCEEecc--HH
Confidence 0001112321 1222333322 4 56889999999999999999853 332 3322 122348888844 55
Q ss_pred HH
Q 001960 798 TI 799 (991)
Q Consensus 798 ~i 799 (991)
.+
T Consensus 173 el 174 (176)
T TIGR00213 173 DL 174 (176)
T ss_pred Hh
Confidence 44
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.065 Score=55.82 Aligned_cols=92 Identities=16% Similarity=0.229 Sum_probs=59.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++-||+.++++.|+++|+++.++|+-... .....+.+|+...-+.++...+. ....|.. .
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~------------------~~~KP~~-~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEV------------------GAEKPDP-K 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeeccc------------------CCCCCCH-H
Confidence 57799999999999999999999986654 46677778875322222222211 1112221 1
Q ss_pred HHHHHHHhhcC---CEEEEeCCCC-CChHhhhhCCee
Q 001960 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIG 772 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG~-ND~~al~~Advg 772 (991)
-+.+.+++. | +.+++|||+. +|+.+-++|++-
T Consensus 165 ~~~~~~~~~-~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERA-GISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHc-CCChhHEEEECCCchHHHHHHHHcCCe
Confidence 222223322 3 6799999997 899998888753
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.12 Score=54.52 Aligned_cols=88 Identities=17% Similarity=0.138 Sum_probs=58.8
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccC
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~t---a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 734 (991)
+-|.-|++.+.++.+++.|++|+++||+.... +..--++.|+..-..+++.+.+-. ....
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~-----------------~~~~ 180 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDS-----------------NKTV 180 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCC-----------------CchH
Confidence 44778999999999999999999999999765 334445578764233333321100 0001
Q ss_pred hhhHHHHHHHHHhhcC-CEEEEeCCCCCCh
Q 001960 735 PMDKHTLVKHLRTTLG-EVVAVTGDGTNDA 763 (991)
Q Consensus 735 P~~K~~~v~~l~~~~g-~~v~~iGDG~ND~ 763 (991)
-+-|...-+.+.+. | .+++.+||-.+|.
T Consensus 181 ~~yKs~~R~~l~~~-GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 181 VTYKSEVRKSLMEE-GYRIWGNIGDQWSDL 209 (229)
T ss_pred hHHHHHHHHHHHhC-CceEEEEECCChHHh
Confidence 12266666667666 6 5889999999886
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.089 Score=55.70 Aligned_cols=97 Identities=16% Similarity=0.236 Sum_probs=59.5
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHH-HHHHcCCccCCceeeeCc--ccccCCHHHHhhhccccceEeccChh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKA-IARECGILTDNGIAIEGP--EFREKSDEELSKLIPKIQVMARSSPM 736 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~-ia~~~gi~~~~~~vi~g~--~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (991)
++.||+.+.++.|++.|+++.++||-....... +.+..|+...-..++.+. +.. ...-.|+
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~----------------~~KP~p~ 141 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVK----------------QGKPAPD 141 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhcc----------------CCCCCcH
Confidence 568999999999999999999999987654432 222234432212233332 110 0111222
Q ss_pred hHHHHHHHHH---hhcCCEEEEeCCCCCChHhhhhCCeeE
Q 001960 737 DKHTLVKHLR---TTLGEVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 737 ~K~~~v~~l~---~~~g~~v~~iGDG~ND~~al~~Advgi 773 (991)
-=...++.+. -. .+.++||||+..|+.+-+.|++-.
T Consensus 142 ~~~~a~~~~~~~~~~-~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 142 IFLAAARRFEDGPVD-PGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred HHHHHHHHhCCCCCC-ccceEEEeccHhhHHHHHHCCCeE
Confidence 2233333332 11 367999999999999999999764
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.15 Score=55.38 Aligned_cols=87 Identities=13% Similarity=0.180 Sum_probs=60.6
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccC
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~---ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 734 (991)
..++-||+.+.++.+++.|+++.++|+.... .+....+..|+...... .++.|-.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d----------------------~lllr~~ 173 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE----------------------HLLLKKD 173 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc----------------------eEEeCCC
Confidence 4567899999999999999999999998743 34455667888532100 0333333
Q ss_pred hhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhh
Q 001960 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALH 767 (991)
Q Consensus 735 P~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~ 767 (991)
...|....+.+.+. -.+++++||-.+|.....
T Consensus 174 ~~~K~~rr~~I~~~-y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 174 KSSKESRRQKVQKD-YEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCcHHHHHHHHhc-CCEEEEECCCHHHhhhhh
Confidence 33566666666555 577999999999986543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.21 Score=53.81 Aligned_cols=94 Identities=16% Similarity=0.185 Sum_probs=60.7
Q ss_pred EEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHH--HHHHHcCCcc-CCceeeeCcccccCCHHHHhhhccccce
Q 001960 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAK--AIARECGILT-DNGIAIEGPEFREKSDEELSKLIPKIQV 729 (991)
Q Consensus 653 G~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~--~ia~~~gi~~-~~~~vi~g~~~~~~~~~~~~~~~~~~~v 729 (991)
|.+.-.+.+-|+++++++.|+++|+++.++|.-....+. ...+++|+.. ....+++..+
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~------------------ 78 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGE------------------ 78 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHH------------------
Confidence 444456778999999999999999999999996554444 5668889864 2222222211
Q ss_pred EeccChhhHHHHHHHHHhh--cCCEEEEeCCCCCChHhhhhCC
Q 001960 730 MARSSPMDKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEAD 770 (991)
Q Consensus 730 ~ar~sP~~K~~~v~~l~~~--~g~~v~~iGDG~ND~~al~~Ad 770 (991)
.....+.+.+++. .+..+.++||+.+|...+..++
T Consensus 79 ------~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 79 ------IAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ------HHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 0111222222221 1467999999999998886443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.089 Score=52.73 Aligned_cols=98 Identities=21% Similarity=0.188 Sum_probs=61.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD---------------~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~ 724 (991)
++-||+.+++++|+++|+++.++|.- ....+..+.+..|+.- . .++.+.....
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f-d-~ii~~~~~~~---------- 96 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF-D-DVLICPHFPD---------- 96 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce-e-EEEECCCCCC----------
Confidence 45689999999999999999999985 2446677777888741 1 1221100000
Q ss_pred cccceEeccChhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEE
Q 001960 725 PKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 774 (991)
Q Consensus 725 ~~~~v~ar~sP~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgia 774 (991)
-.... ..|. ..+++.+.+++| +.+.||||+.+|..+-+.|++-..
T Consensus 97 --~~~~~-~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 97 --DNCDC-RKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred --CCCCC-CCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 00111 1222 333333333323 469999999999999999987754
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=93.86 E-value=0.23 Score=64.59 Aligned_cols=115 Identities=17% Similarity=0.197 Sum_probs=77.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc-cCCceeeeCcccccCCHHHHhhhccccceEeccChh--
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL-TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM-- 736 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~-~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~-- 736 (991)
.+.||+.+.++.|+++|+++.++|+-....+..+-+..|+. ..-+.++.+.+. .+..|.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~------------------~~~KP~Pe 222 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAF------------------ENLKPAPD 222 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccc------------------ccCCCCHH
Confidence 35799999999999999999999999999999998999985 222234433331 122332
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee-EEec--CCCcHHHHhhcCEEecc
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMG--IAGTEVAKESADVIILD 793 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg-iamg--~~g~~~ak~~ad~vl~~ 793 (991)
-=....+.+.-. .+.++++||..+|+.+-+.|++- |.+. ....+.....+|+++.+
T Consensus 223 ~~~~a~~~lgv~-p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~ 281 (1057)
T PLN02919 223 IFLAAAKILGVP-TSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD 281 (1057)
T ss_pred HHHHHHHHcCcC-cccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 222333333322 36799999999999999999974 3332 11122344568888855
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.74 E-value=0.14 Score=57.80 Aligned_cols=99 Identities=23% Similarity=0.201 Sum_probs=61.9
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhh
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKL 723 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD---------------~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~ 723 (991)
-++.|++.++++.|+++|+++.++|+- ....+..+.+..|+.- +..++......+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f-d~i~i~~~~~sd--------- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF-DEVLICPHFPED--------- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce-eeEEEeCCcCcc---------
Confidence 467899999999999999999999983 2334666777777742 111121100000
Q ss_pred ccccceEeccChhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEE
Q 001960 724 IPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 774 (991)
Q Consensus 724 ~~~~~v~ar~sP~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgia 774 (991)
. ..+| .| |..++..+.++.+ +.+.||||+.+|..+-+.|++-..
T Consensus 99 --~--~~~r-KP--~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 --N--CSCR-KP--KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred --c--CCCC-CC--CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 0 1111 22 2333433333322 679999999999999999988743
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.19 Score=50.60 Aligned_cols=91 Identities=12% Similarity=0.163 Sum_probs=57.8
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHH------------HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccc
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNIN------------TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~------------ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 728 (991)
+-||+.++++.|+++|+++.++|.-... .+..+.+.+|+.. ..++.+..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~----------------- 103 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHA----------------- 103 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCC-----------------
Confidence 3499999999999999999999975542 4566778888743 22222211
Q ss_pred eEeccChhhHHHHHHHHHhhcC-----CEEEEeCCCC--------CChHhhhhCCeeE
Q 001960 729 VMARSSPMDKHTLVKHLRTTLG-----EVVAVTGDGT--------NDAPALHEADIGL 773 (991)
Q Consensus 729 v~ar~sP~~K~~~v~~l~~~~g-----~~v~~iGDG~--------ND~~al~~Advgi 773 (991)
...| .|. ..+++.+.+++| +.+.||||.. +|..+-++|++-.
T Consensus 104 ~~~~-KP~--p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 104 GLYR-KPM--TGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred CCCC-CCc--cHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 0011 222 122222222223 5699999986 6999988887654
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.16 Score=48.70 Aligned_cols=39 Identities=5% Similarity=0.135 Sum_probs=35.0
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcC
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGD-NINTAKAIARECG 698 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD-~~~ta~~ia~~~g 698 (991)
++.||+.+.++.|+++|+++.++|+. ....+..+.+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777777777766
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.27 E-value=0.089 Score=55.63 Aligned_cols=96 Identities=10% Similarity=0.104 Sum_probs=62.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
++.||+++.++.| ++++.++|+.....+...-+..|+...- ..++++.+.. ..+-.|+-=
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~----------------~~KP~p~~~ 148 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQ----------------RWKPDPALM 148 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcC----------------CCCCChHHH
Confidence 4568999999988 5999999999988888888888886431 1233332211 001112222
Q ss_pred HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEe
Q 001960 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 775 (991)
Q Consensus 739 ~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiam 775 (991)
....+.+.-. .+.+++|||..+|..+=+.|++....
T Consensus 149 ~~a~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 149 FHAAEAMNVN-VENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 2222222211 25689999999999999999987653
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.87 Score=49.47 Aligned_cols=48 Identities=29% Similarity=0.400 Sum_probs=36.9
Q ss_pred EEeeccCC----CcccHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHcCCc
Q 001960 653 GIVGIKDP----MRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGIL 700 (991)
Q Consensus 653 G~~~i~D~----lr~~v~~~I~~l~~aGi~v~mlTGD~~~t---a~~ia~~~gi~ 700 (991)
|.+.-.+. +=|++.++|++|+++|++++++||....+ .....+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 34444455 78899999999999999999999977664 55555667875
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=92.89 E-value=0.39 Score=50.74 Aligned_cols=98 Identities=11% Similarity=0.146 Sum_probs=63.6
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC---CccCCceeeeCcccccCCHHHHhhhccccceEeccC
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG---ILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~g---i~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 734 (991)
+-++.||+.+++++|+++|+++.++|..+......+-+..+ +..- + ...+. ..+...-.
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~----f-------------~~~fd-~~~g~KP~ 154 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY----F-------------SGYFD-TTVGLKTE 154 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh----c-------------ceEEE-eCcccCCC
Confidence 45789999999999999999999999998877777666542 2110 0 00111 01111222
Q ss_pred hhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE
Q 001960 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (991)
Q Consensus 735 P~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia 774 (991)
|+-=..+.+.+.-. .+.++++||...|+.+-++|++-..
T Consensus 155 p~~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 155 AQSYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred HHHHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 22223333333322 3679999999999999999998654
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=92.86 E-value=0.13 Score=54.00 Aligned_cols=98 Identities=13% Similarity=0.125 Sum_probs=56.5
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHH--HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChh
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINT--AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~t--a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (991)
-++.|++.+.++.|+++|+++.++|...... ........|+...-+.++...+. -...-.|+
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~----------------~~~KP~p~ 156 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLE----------------GLRKPDPR 156 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeec----------------CCCCCCHH
Confidence 3678999999999999999999999875432 22222233442211112111110 00111222
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeE
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgi 773 (991)
-=..+.+.+.-. .+.++||||...|+.+-++|++-.
T Consensus 157 ~~~~~~~~~g~~-~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 157 IYQLMLERLGVA-PEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred HHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHcCCEE
Confidence 212222333222 356888999999999999998753
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=92.83 E-value=0.23 Score=55.81 Aligned_cols=91 Identities=10% Similarity=0.116 Sum_probs=69.2
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----cCCccCCceeeeCcccccCCHHHHhhhccccceEeccCh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE----CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~----~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (991)
++.+++.++++.|++.|+.+.++|.-+...+..+.+. +|+...- ......+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f-------------------------~~~~~~~ 85 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF-------------------------DARSINW 85 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe-------------------------eEEEEec
Confidence 4578999999999999999999999999999999888 7765310 1112224
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEe
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM 775 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiam 775 (991)
..|...++.+.+++| ..++|+||...|..+.+.+...+.+
T Consensus 86 ~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 86 GPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred CchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 456666665554434 6799999999999999998877644
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.82 E-value=1.7 Score=49.24 Aligned_cols=63 Identities=21% Similarity=0.253 Sum_probs=44.6
Q ss_pred hhHHHHHHHHHhhcC------CEEEEeCCCCCChHhhhhC-----CeeEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEA-----DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g------~~v~~iGDG~ND~~al~~A-----dvgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
-+|...++.|.+.+| ..++++||...|-.|++.. ++||.+|.... ...|++.+.+ ...+...+
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L~d--p~eV~~fL 355 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSLQD--PSEVMDFL 355 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeCCC--HHHHHHHH
Confidence 489999988877544 2588999999999998865 47777772111 2558888844 66666554
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=92.78 E-value=0.17 Score=46.34 Aligned_cols=89 Identities=22% Similarity=0.306 Sum_probs=54.2
Q ss_pred EEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH---HHcCCccCCceeeeCcccccCCHHHHhhhccccce
Q 001960 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV 729 (991)
Q Consensus 653 G~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia---~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v 729 (991)
|++...+.+=||+.++|+.|+++|++++++|.....+...++ +.+|+....+. +
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~-----------------------i 63 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDE-----------------------I 63 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGG-----------------------E
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCE-----------------------E
Confidence 445557788899999999999999999999998755544444 66787643211 2
Q ss_pred EeccChhhHHHHHHHHHh-hcCCEEEEeCCCCCChHhhhhCC
Q 001960 730 MARSSPMDKHTLVKHLRT-TLGEVVAVTGDGTNDAPALHEAD 770 (991)
Q Consensus 730 ~ar~sP~~K~~~v~~l~~-~~g~~v~~iGDG~ND~~al~~Ad 770 (991)
+... ....+.|++ ..+..|.++|.. .....++.++
T Consensus 64 ~ts~-----~~~~~~l~~~~~~~~v~vlG~~-~l~~~l~~~G 99 (101)
T PF13344_consen 64 ITSG-----MAAAEYLKEHKGGKKVYVLGSD-GLREELREAG 99 (101)
T ss_dssp EEHH-----HHHHHHHHHHTTSSEEEEES-H-HHHHHHHHTT
T ss_pred EChH-----HHHHHHHHhcCCCCEEEEEcCH-HHHHHHHHcC
Confidence 2211 123344554 236788888865 4455555554
|
... |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=91.75 E-value=0.75 Score=49.57 Aligned_cols=39 Identities=26% Similarity=0.357 Sum_probs=32.6
Q ss_pred hhHHHHHHHHHhhcCCEEEEeCC----CCCChHhhhh-CCeeEEec
Q 001960 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHE-ADIGLAMG 776 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g~~v~~iGD----G~ND~~al~~-Advgiamg 776 (991)
.+|...++.|+ . .+.|+++|| |.||.+||+. -=.|+++.
T Consensus 188 vnKg~al~~L~-~-~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-D-FDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-C-cCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 67888888888 4 677899999 8999999997 55778774
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=91.63 E-value=0.97 Score=44.70 Aligned_cols=103 Identities=20% Similarity=0.249 Sum_probs=70.6
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHH---HHHHc-----CCccCCceeeeCcc--cccCCHHHHhhhcccc
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKA---IAREC-----GILTDNGIAIEGPE--FREKSDEELSKLIPKI 727 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~---ia~~~-----gi~~~~~~vi~g~~--~~~~~~~~~~~~~~~~ 727 (991)
+|..++++.+..+.+++.|++++.+|++..--+.. .-.+. ++. .+.++..++ +..+..
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP--~Gpv~~sP~~l~~al~r---------- 92 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLP--DGPVLLSPDSLFSALHR---------- 92 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCC--CCCEEECCcchhhhhhc----------
Confidence 47999999999999999999999999999654433 33333 432 222332211 111111
Q ss_pred ceEeccChhhHHHHHHHHHhh----cCCEEEEeCCCCCChHhhhhCCee
Q 001960 728 QVMARSSPMDKHTLVKHLRTT----LGEVVAVTGDGTNDAPALHEADIG 772 (991)
Q Consensus 728 ~v~ar~sP~~K~~~v~~l~~~----~g~~v~~iGDG~ND~~al~~Advg 772 (991)
.+..+-.-+.|...++.++.. .....+..|...+|+.+-++++|-
T Consensus 93 Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 144555557899999999875 235788899999999999987665
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.55 E-value=0.33 Score=50.40 Aligned_cols=95 Identities=13% Similarity=0.100 Sum_probs=57.4
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeeeCcccccCCHHHHhhhccccceEeccChh--
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM-- 736 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~-~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~-- 736 (991)
++.||+.++++.|+++|+++.++|.-+.......... .++...-+.++...+ +....|.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~------------------~~~~KP~p~ 145 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQD------------------LGMRKPEAR 145 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecc------------------cCCCCCCHH
Confidence 4689999999999999999999999876654433222 233221111222111 1111232
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeE
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgi 773 (991)
-=..+.+.+.-. .+.++++||...|+.+-++|++-.
T Consensus 146 ~~~~~~~~~~~~-p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 146 IYQHVLQAEGFS-AADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHcCCEE
Confidence 112222333222 356899999999999999988754
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.45 E-value=0.28 Score=50.28 Aligned_cols=121 Identities=21% Similarity=0.270 Sum_probs=72.6
Q ss_pred CCcccHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcc--ccceEeccCh-
Q 001960 660 PMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP--KIQVMARSSP- 735 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi-~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~--~~~v~ar~sP- 735 (991)
|+-|+..++|+.+++.|- .++++|--|..-...+-+..|+..--..+.+.+.--+- .-.-.+.+ .-.-|.+|.|
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da--~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDA--SGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCC--CCcEEeecCCCCCccCcCchh
Confidence 667899999999999997 99999999998888888888875210001110000000 00000000 0012333333
Q ss_pred hhHHHHHHHHHhhc---C---CEEEEeCCCCCC-hHhhhhCCeeEEecCCCcHH
Q 001960 736 MDKHTLVKHLRTTL---G---EVVAVTGDGTND-APALHEADIGLAMGIAGTEV 782 (991)
Q Consensus 736 ~~K~~~v~~l~~~~---g---~~v~~iGDG~ND-~~al~~Advgiamg~~g~~~ 782 (991)
.=|..++..++... | +.+..+|||.|| +|+++...--+||--.|-+.
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 34666666665430 2 378999999999 78887777667775455444
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=89.69 E-value=0.77 Score=46.90 Aligned_cols=93 Identities=10% Similarity=-0.012 Sum_probs=62.2
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEec---cChh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR---SSPM 736 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar---~sP~ 736 (991)
++.+++.+++++|+ .++.++|.-+...+..+.+..|+...-+.++.+++. -.+ ..|.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~-----------------~~~~~~~KP~ 143 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTA-----------------NPDYLLPKPS 143 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecc-----------------cCccCCCCCC
Confidence 46789999999997 478999999999999999999986432233333221 111 2332
Q ss_pred h--HHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeE
Q 001960 737 D--KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 737 ~--K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgi 773 (991)
. =..+++.+... .+.++|+||...|+.+=+.|++..
T Consensus 144 p~~~~~~~~~~~~~-~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 144 PQAYEKALREAGVD-PERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHHHhCCC-ccceEEEeCCHHHHHHHHHcCCEE
Confidence 2 22333333323 366889999999999988887653
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.35 E-value=0.76 Score=47.01 Aligned_cols=93 Identities=14% Similarity=0.099 Sum_probs=61.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHH
Q 001960 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (991)
Q Consensus 662 r~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~ 741 (991)
-|+ .+.++.|++. ++..++||.....+..+-+..|+...-+.++.+++.. ..+-.|+-=...
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~----------------~~KP~p~~~~~~ 151 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQ----------------HHKPAPDTFLRC 151 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhcc----------------CCCCChHHHHHH
Confidence 344 5899999875 8999999999999999999999864323344333211 011122222233
Q ss_pred HHHHHhhcCCEEEEeCCCCCChHhhhhCCeeE
Q 001960 742 VKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 742 v~~l~~~~g~~v~~iGDG~ND~~al~~Advgi 773 (991)
.+.+.-. .+.+.++||..+|+.+-+.|++-.
T Consensus 152 ~~~~~~~-~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 152 AQLMGVQ-PTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHcCCC-HHHeEEEeccHhhHHHHHHCCCEE
Confidence 3333222 245889999999999999998753
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.20 E-value=1.6 Score=47.15 Aligned_cols=48 Identities=19% Similarity=0.296 Sum_probs=40.3
Q ss_pred EEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH---cCCc
Q 001960 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE---CGIL 700 (991)
Q Consensus 653 G~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~---~gi~ 700 (991)
|.+.-.+.+-|++.++++.|+++|++++++|+....+...++++ +|+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 55555678889999999999999999999999998887777776 4664
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=88.97 E-value=0.45 Score=50.63 Aligned_cols=91 Identities=22% Similarity=0.289 Sum_probs=59.4
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccC
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~---ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 734 (991)
+++.=|++.+.++.+++.|++|+++||++.. ....--++.|....+.+++.+..-.. ....
T Consensus 113 ~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~----------------~~~~ 176 (229)
T PF03767_consen 113 KAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPS----------------KKSA 176 (229)
T ss_dssp GGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTS----------------S---
T ss_pred cCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccc----------------cccc
Confidence 3466688999999999999999999998854 33333455676543333333322100 0012
Q ss_pred hhhHHHHHHHHHhhcC-CEEEEeCCCCCChHh
Q 001960 735 PMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPA 765 (991)
Q Consensus 735 P~~K~~~v~~l~~~~g-~~v~~iGDG~ND~~a 765 (991)
.+-|...-+.++++ | ++++.+||-.+|..-
T Consensus 177 ~~yK~~~r~~i~~~-Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 177 VEYKSERRKEIEKK-GYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ---SHHHHHHHHHT-TEEEEEEEESSGGGCHC
T ss_pred cccchHHHHHHHHc-CCcEEEEeCCCHHHhhc
Confidence 23477778888877 6 688999999999876
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=88.95 E-value=0.76 Score=51.46 Aligned_cols=49 Identities=22% Similarity=0.369 Sum_probs=38.6
Q ss_pred EEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH---HHcCCcc
Q 001960 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILT 701 (991)
Q Consensus 653 G~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia---~~~gi~~ 701 (991)
|.+.-.+.+=|++.++|+.|++.|++++++|+....+...++ +++|+..
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~ 88 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNV 88 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 344445666799999999999999999999999976666666 5677753
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=88.44 E-value=0.93 Score=46.89 Aligned_cols=94 Identities=15% Similarity=0.116 Sum_probs=56.7
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|++.+ +.+++|.-+..+....-+.+|+..-.. ..+ ...+.++... .|-
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~-----------------~~f-~~i~~~~~~~-~kp 133 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFP-----------------GAF-SEVLMCGHDE-SKE 133 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCC-----------------Ccc-cEEEEeccCc-ccH
Confidence 46899999999999985 566667655444444555666542100 000 0002222222 134
Q ss_pred HHHHHHHhhcC-CEEEEeCCCCCChHhhhhC--CeeE
Q 001960 740 TLVKHLRTTLG-EVVAVTGDGTNDAPALHEA--DIGL 773 (991)
Q Consensus 740 ~~v~~l~~~~g-~~v~~iGDG~ND~~al~~A--dvgi 773 (991)
++++...+++| +.++++||..+|+.+-++| ++-.
T Consensus 134 ~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 134 KLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred HHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 45554444435 4588999999999999999 8853
|
2 hypothetical protein; Provisional |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=87.83 E-value=1.7 Score=43.70 Aligned_cols=83 Identities=19% Similarity=0.155 Sum_probs=62.0
Q ss_pred cCCCcccHHHHHHHHHHCCC--EEEEEcCC-------CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccc
Q 001960 658 KDPMRPGVKESVAICRSAGI--TVRMVTGD-------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi--~v~mlTGD-------~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 728 (991)
++.+-|+..+.+++|++.+. +|.++|-- +...|..+++.+|+.--
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl-------------------------- 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVL-------------------------- 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEE--------------------------
Confidence 67888999999999999987 49999986 48899999999998520
Q ss_pred eEeccChhhHHHHHHHHHhh----cCCEEEEeCCCC-CChHhh
Q 001960 729 VMARSSPMDKHTLVKHLRTT----LGEVVAVTGDGT-NDAPAL 766 (991)
Q Consensus 729 v~ar~sP~~K~~~v~~l~~~----~g~~v~~iGDG~-ND~~al 766 (991)
.+....|.-..++.+.++.+ ..+.++||||-. .|+-+=
T Consensus 111 ~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~g 153 (168)
T PF09419_consen 111 RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMG 153 (168)
T ss_pred EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHh
Confidence 12334786666777777643 135699999963 355443
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.77 E-value=3.2 Score=42.34 Aligned_cols=51 Identities=22% Similarity=0.354 Sum_probs=42.1
Q ss_pred EEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH---HcCCc
Q 001960 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR---ECGIL 700 (991)
Q Consensus 650 ~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~---~~gi~ 700 (991)
.+-|.+.++|..-|++.||++.|+.++.+|..+|.-..+.-+.+.+ .||+.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 3569999999999999999999999999999999877665555554 46664
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=85.32 E-value=1.9 Score=46.92 Aligned_cols=52 Identities=15% Similarity=0.177 Sum_probs=44.2
Q ss_pred Cc-ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCccc
Q 001960 661 MR-PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF 712 (991)
Q Consensus 661 lr-~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~ 712 (991)
+| |++.+++++|+++|+++.++|+-....+...-+++|+...-+.++.+.+.
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv 198 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHK 198 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcc
Confidence 67 99999999999999999999999999999999999997543455555444
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.20 E-value=1.8 Score=45.88 Aligned_cols=100 Identities=16% Similarity=0.192 Sum_probs=74.9
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhh
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 737 (991)
..++.||+.+.+++|++.|+.+.+.|+-....+..+.+..|+...-..++++.+.. -.+-.|+-
T Consensus 84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~----------------~~KP~Pd~ 147 (221)
T COG0637 84 GLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVA----------------RGKPAPDI 147 (221)
T ss_pred CCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHh----------------cCCCCCHH
Confidence 35789999999999999999999999999999999999999986544444444321 11334444
Q ss_pred HHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE
Q 001960 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (991)
Q Consensus 738 K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia 774 (991)
=....+.|.-. ...+.++.|..|.+.|-++|+.-+-
T Consensus 148 yL~Aa~~Lgv~-P~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 148 YLLAAERLGVD-PEECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred HHHHHHHcCCC-hHHeEEEecchhHHHHHHHCCCEEE
Confidence 44555554333 4678999999999999999996643
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=84.27 E-value=4.6 Score=43.63 Aligned_cols=88 Identities=20% Similarity=0.283 Sum_probs=55.2
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHH----HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEecc
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNIN----TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~----ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (991)
+.|.=|++.+..+.+++.|++|+++||+... |..++ ++.|......+++.++.-. -...
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~~~LiLR~~~D~----------------~~~~ 205 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTWEKLILKDPQDN----------------SAEN 205 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCcceeeecCCCCC----------------ccch
Confidence 5567789999999999999999999999854 33443 3467754333333221100 0001
Q ss_pred ChhhHHHHHHHHHhhcC-CEEEEeCCCCCCh
Q 001960 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDA 763 (991)
Q Consensus 734 sP~~K~~~v~~l~~~~g-~~v~~iGDG~ND~ 763 (991)
..+.|...=+.+.+. | ++++.+||-.+|.
T Consensus 206 av~yKs~~R~~li~e-GYrIv~~iGDq~sDl 235 (275)
T TIGR01680 206 AVEYKTAARAKLIQE-GYNIVGIIGDQWNDL 235 (275)
T ss_pred hHHHHHHHHHHHHHc-CceEEEEECCCHHhc
Confidence 113354444445555 5 6889999999986
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=83.26 E-value=11 Score=44.85 Aligned_cols=98 Identities=13% Similarity=0.059 Sum_probs=62.3
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeeeCcccccCCHHHHhhhccccceEec------c
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR------S 733 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~-~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar------~ 733 (991)
+++++.+ .+++.|.+ +++|+-...-+..+|++ +|++. ++ |.+++.- .+-.+-++ +
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~----VI-gTeLev~---------~~G~~TG~i~g~~~c 172 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADK----VL-GTELEVS---------KSGRATGFMKKPGVL 172 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCE----EE-ecccEEC---------cCCEEeeeecCCCCC
Confidence 5566544 44567755 99999999999999988 89862 11 1111100 00001111 3
Q ss_pred ChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecC
Q 001960 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI 777 (991)
Q Consensus 734 sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~ 777 (991)
.-++|..-++..... .....+-||..||.|||+.|+-+.+++.
T Consensus 173 ~Ge~Kv~rl~~~~g~-~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 173 VGDHKRDAVLKEFGD-ALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred ccHHHHHHHHHHhCC-CCceEEEECCccHHHHHHhCCccEEeCC
Confidence 446788877743211 1123677999999999999999999983
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=82.86 E-value=9.7 Score=41.84 Aligned_cols=48 Identities=17% Similarity=0.183 Sum_probs=35.2
Q ss_pred EeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHcCCcc
Q 001960 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILT 701 (991)
Q Consensus 654 ~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~---ta~~ia~~~gi~~ 701 (991)
.+.-.+.+=|++.++|++|++.|++++++|+.... ....-.+++|+..
T Consensus 12 tl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 12 VLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred ceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 33445677788999999999999999999996543 3223345678753
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=81.65 E-value=3.7 Score=43.92 Aligned_cols=91 Identities=12% Similarity=0.138 Sum_probs=55.4
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++-||+.++++.|++. +++.++|.-+.. .+..|+...-+.++...+. .+..|. .
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~------------------~~~KP~--p 166 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPH------------------GRSKPF--S 166 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccC------------------CcCCCc--H
Confidence 4568999999999875 899999886654 2556764321222222211 112232 2
Q ss_pred HHHHHHHhhcC---CEEEEeCCC-CCChHhhhhCCeeEEec
Q 001960 740 TLVKHLRTTLG---EVVAVTGDG-TNDAPALHEADIGLAMG 776 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG-~ND~~al~~Advgiamg 776 (991)
.+.....++.| +.++||||. ..|+.+-+.|++-....
T Consensus 167 ~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 167 DMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred HHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 22222222223 569999999 59999999998765543
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=81.52 E-value=3.5 Score=45.06 Aligned_cols=51 Identities=20% Similarity=0.149 Sum_probs=42.0
Q ss_pred Cc-ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcc
Q 001960 661 MR-PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711 (991)
Q Consensus 661 lr-~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~ 711 (991)
+| |++.+++++|+++|+++.++|+.+...+..+.+..|+...-..++.+.+
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~ 199 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGR 199 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCC
Confidence 56 8999999999999999999998888888999999999754344554443
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=80.84 E-value=15 Score=41.59 Aligned_cols=63 Identities=17% Similarity=0.257 Sum_probs=44.2
Q ss_pred hhHHHHHHHHHhhcC------CEEEEeCCCCCChHhhhhC-----CeeEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEA-----DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g------~~v~~iGDG~ND~~al~~A-----dvgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
-+|...|+.+.+..+ ..++++||-..|-.|++.. ++||-+| .+.. .-.|++.+.+ ...+..++
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg-~~~k--~T~A~y~L~d--p~eV~~~L 341 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS-KYAK--ETNASYSLQE--PDEVMEFL 341 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec-cCCC--CCcceEeCCC--HHHHHHHH
Confidence 489999998876644 2489999999999998753 6777776 2211 2358888865 66666554
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 991 | ||||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 5e-80 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 1e-79 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 1e-79 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 1e-78 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 2e-78 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 4e-78 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 3e-77 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 2e-73 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 5e-42 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 6e-36 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 1e-16 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 1e-16 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 5e-16 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 3e-15 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 3e-15 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 8e-15 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 9e-15 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 3e-14 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 3e-09 | ||
| 3gwi_A | 170 | Crystal Structure Of Mg-Atpase Nucleotide Binding D | 2e-05 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 2e-04 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 2e-04 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 3e-04 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 7e-04 |
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|3GWI|A Chain A, Crystal Structure Of Mg-Atpase Nucleotide Binding Domain Length = 170 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 991 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 0.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 0.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 0.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-172 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-170 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-43 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-43 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 3e-42 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 8e-34 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 6e-33 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-31 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 1e-22 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 6e-11 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 3e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-05 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 2e-07 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-06 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 4e-06 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 4e-06 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 9e-06 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 1e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 2e-05 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 4e-05 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 4e-05 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 8e-05 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 1e-04 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 1e-04 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 1e-04 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 2e-04 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 2e-04 | |
| 2l1w_B | 26 | Vacuolar calcium ATPase BCA1 peptide; calmodulin, | 3e-04 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 3e-04 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 4e-04 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 5e-04 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 9e-04 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 653 bits (1688), Expect = 0.0
Identities = 243/915 (26%), Positives = 384/915 (41%), Gaps = 127/915 (13%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V + +K TS T G+S S G N +V L ++
Sbjct: 58 VAELEQKYQTSATKGLSASLA--AELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMW 115
Query: 181 VCALVSLVVGI---ATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQ------SLQ-FKD 230
V A + L+ + + L + ++ VV VT Y Q + FK+
Sbjct: 116 VAAAICLIAFAIQASEGDLTTDDNLYLALA--LIAVVVVTGCFGYYQEFKSTNIIASFKN 173
Query: 231 LDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLT 290
L ++ V R+G + +I+ L+ GD+V + GD+VPAD + ++ SSLT
Sbjct: 174 LVPQQ----ATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDNSSLT 229
Query: 291 GESEPV--NVNALNPFLL-------SGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341
GESEP + + L T G+ + LV G RT G++ + S +
Sbjct: 230 GESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVEN 289
Query: 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFF 401
++TP+ +++ II + + F F V + G L + F
Sbjct: 290 EKTPIAIEIEHFVDIIAGLAILFGATFFIVAM---------------CIGYTFLRAMVF- 333
Query: 402 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTL 461
+ IVV VPEGL VT+ L+ K++ + +V++L A ET+GS + ICSDKTGTL
Sbjct: 334 --FMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTL 391
Query: 462 TTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQ-------SIFNNTGGEVV 514
T N MTV I D ++ + + L + + F + V
Sbjct: 392 TQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVP 451
Query: 515 IGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE- 573
+ + ++G +ETA+L+F L G+ R+ V PFNS K + L +
Sbjct: 452 VPKR---IVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDP 508
Query: 574 --GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLAC 631
+ KGA E +L C L G+ +PL+E R L
Sbjct: 509 RDPRHVLVMKGAPERVLERCSSIL-IKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQ 567
Query: 632 MEI-------GNEFSADAP-IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVT 683
+ + G F +A PT G + G+V + DP R V ++V CR+AGI V MVT
Sbjct: 568 LYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVT 627
Query: 684 GDNINTAKAIARECGILTDNG------------------------IAIEGPEFREKSDEE 719
GD+ TAKAIA GI+++ I G + ++ E
Sbjct: 628 GDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSE 687
Query: 720 LSKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI 777
L + + V AR+SP K +V+ + LG +VAVTGDG ND+PAL +ADIG+AMGI
Sbjct: 688 LVEALRTHPEMVFARTSPQQKLVIVESCQR-LGAIVAVTGDGVNDSPALKKADIGVAMGI 746
Query: 778 AGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACL 837
AG++ AK +AD+I+LDDNF++IVT + GR ++ N++K + + LT N+ L +
Sbjct: 747 AGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITV 806
Query: 838 TGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISN--VMWRNILG 895
+ PL + +L++ + D +++LA E D+M P K + + N + +
Sbjct: 807 SVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQ 866
Query: 896 QSLYQ-----FLIIWYLQTRGKAVFRLDGPDPDLILN----------------------- 927
Q + G G P +
Sbjct: 867 IGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQY 926
Query: 928 ---TLIFNTFVFCQL 939
T+ F + CQ+
Sbjct: 927 TCYTVFFISIEMCQI 941
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 649 bits (1676), Expect = 0.0
Identities = 255/914 (27%), Positives = 392/914 (42%), Gaps = 125/914 (13%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
++ + K T +T G++ + G N T P W+ L ++L
Sbjct: 53 LDELHNKYGTDLTRGLTNAR--AKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLW 110
Query: 181 VCALVSLVVGI---ATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQ------SLQ-FKD 230
+ A++ + ATE P + LG+V + VV VT Y Q + FK+
Sbjct: 111 IGAILCFLAYGIQAATEDEPANDNLYLGVV--LSTVVIVTGCFSYYQEAKSSRIMDSFKN 168
Query: 231 LDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLT 290
+ ++ V R+G + I+ ++ GD+V + GD++PAD +S ++ SSLT
Sbjct: 169 MVPQQ----ALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSSLT 224
Query: 291 GESEPV--NVNAL--NPF-----LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341
GESEP + NP T G+ + +V G RT G++ S
Sbjct: 225 GESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEV 284
Query: 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFF 401
TP+ +++ II + +F V F + + G LE + F
Sbjct: 285 GRTPIAIEIEHFIHIITGVAVFLGVSFFILSL---------------ILGYSWLEAVIF- 328
Query: 402 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTL 461
+ I+V VPEGL VT+ L K+M LV++L A ET+GS ++ICSDKTGTL
Sbjct: 329 --LIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTL 386
Query: 462 TTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIF--NNTGGEVVIGEGN 519
T N MTV +I E D ++ ++ L + N G+ N
Sbjct: 387 TQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRA--VFQAGQDN 444
Query: 520 ----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP--- 572
K + G +E+A+L+ L G Q R + + PFNS K + E
Sbjct: 445 VPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSS 504
Query: 573 EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACM 632
E + + KGA E IL C L NG PL E + R L
Sbjct: 505 ESRYLLVMKGAPERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHF 563
Query: 633 EI-------GNEFSADAP-IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTG 684
+ G F AD P PT +G++ + DP R V ++V CRSAGI V MVTG
Sbjct: 564 ALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTG 623
Query: 685 DNINTAKAIARECGILTDNG------------------------IAIEGPEFREKSDEEL 720
D+ TAKAIA+ GI+++ + G + ++ S E L
Sbjct: 624 DHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVL 683
Query: 721 SKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778
++ V AR+SP K +V+ + G +VAVTGDG ND+PAL +ADIG+AMGI+
Sbjct: 684 DDILHYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIS 742
Query: 779 GTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 838
G++V+K++AD+I+LDDNF++IVT + GR ++ N++K + + LT N+ +
Sbjct: 743 GSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGN 802
Query: 839 GNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISN--VMWRNILGQ 896
PL V +L +++ D + A++LA E D+MKR P K + + N ++
Sbjct: 803 VPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQI 862
Query: 897 SLYQ-----FLIIWYLQTRGKAVFRL--------DGPDPDLILN---------------- 927
+ Q F L G L D D+ +
Sbjct: 863 GMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFT 922
Query: 928 --TLIFNTFVFCQL 939
T F + V Q
Sbjct: 923 CHTSFFISIVVVQW 936
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 616 bits (1590), Expect = 0.0
Identities = 248/923 (26%), Positives = 389/923 (42%), Gaps = 126/923 (13%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
E S T G++ + + R E YG N+ + W V E D+ + IL
Sbjct: 10 TEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILL 67
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQ---------SLQFKDL 231
+ A +S V+ EG V ILL++ A Q +L K+
Sbjct: 68 LAACISFVLAWFEEGEETITAFVEPFV--ILLILIANAIVGVWQERNAENAIEAL--KEY 123
Query: 232 DREKKKITVQVARNGFR--RKISIYDLLPGDIVHLCMGDQVPADG--LFVSGFSVLINES 287
+ E +V R + ++I D++PGDIV + +GD+VPAD L + ++ +++S
Sbjct: 124 EPE----MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQS 179
Query: 288 SLTGESEPV--NVNALNP----------FLLSGTKVQNGSCKMLVTTVGMRTQWGKLMAT 335
LTGES V + + L SGT + G +V T G+ T+ GK+
Sbjct: 180 ILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQ 239
Query: 336 LSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDAL 395
++ D+TPLQ KL+ + K+ V + + + G
Sbjct: 240 MAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLI---NIGH-----FNDPVHGGSWIR 291
Query: 396 EILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICS 455
+ +F IAV + V A+PEGLP +T LA ++M A+VR L + ET+G + ICS
Sbjct: 292 GAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICS 351
Query: 456 DKTGTLTTNHMTVLKACICEEIKEVDNSK-------------------GTPAFGSSIPAS 496
DKTGTLTTN M+V K I +++ S P
Sbjct: 352 DKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDG- 410
Query: 497 ASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVE 556
+L N E +G TETA+ + R SK+ +
Sbjct: 411 LVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERAN 470
Query: 557 ----------------PFNSVKKQMGVVIELPEG-----GFRVHCKGASEIILAACDKFL 595
F+ +K M V + G ++ KGA E ++ C+
Sbjct: 471 ACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVR 530
Query: 596 NSNGEVVPLNEAAVNHLNETIEKF--ASEALRTLCLACMEIGNEFSADAPIPTEGY---- 649
VP+ + I+++ + LR L LA + + + +
Sbjct: 531 -VGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYE 589
Query: 650 ---TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--- 703
T +G+VG+ DP R V S+ +CR AGI V M+TGDN TA AI R GI +N
Sbjct: 590 TDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEV 649
Query: 704 -GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTND 762
A G EF + E + + AR P K +V++L++ E+ A+TGDG ND
Sbjct: 650 ADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVND 708
Query: 763 APALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLT 822
APAL +A+IG+AMG +GT VAK ++++++ DDNFSTIV + GR++Y N+++F+++ ++
Sbjct: 709 APALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLIS 767
Query: 823 VNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKG 882
NV ++ F +A L L VQLLWVN++ D L A AL PP+ D+M R P K
Sbjct: 768 SNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKE 827
Query: 883 NFISNVMWRNILGQSLYQFLI------IWYLQTRGKAVFRLDGPDPDLILN--------- 927
IS ++ + Y W++ +
Sbjct: 828 PLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGL 887
Query: 928 -----------TLIFNTFVFCQL 939
T+ + V ++
Sbjct: 888 DCEIFEAPEPMTMALSVLVTIEM 910
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 524 bits (1351), Expect = e-172
Identities = 156/828 (18%), Positives = 325/828 (39%), Gaps = 89/828 (10%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
+E + ++L S +G++T E R +I+G NK E + + + ++
Sbjct: 19 IEEVFQQLKCS-REGLTTQE--GEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVME 74
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQ-FKDLDREKKKI- 238
+ A++++ + G + I+ ++ + +T + + +
Sbjct: 75 MAAIMAIALANGD-----GRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLA 129
Query: 239 -TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVN 297
+V R+G + L+PGDIV + +GD +PAD + G + +++S+LTGES PV
Sbjct: 130 PKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGESLPVT 189
Query: 298 VNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATI- 356
+ + SG+ + G + +V G+ T +GK A L + + Q L +
Sbjct: 190 KHPGQ-EVFSGSTCKQGEIEAVVIATGVHTFFGK-AAHLVDSTNQVGHFQKVLTAIGNFC 247
Query: 357 IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGL 416
I I + + + + ++ + +++ +P +
Sbjct: 248 ICSIAIGMVIEIIVMYP---------------IQRRKYRDGIDN---LLVLLIGGIPIAM 289
Query: 417 PLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEE 476
P +++++A ++ A+ + + A E M +CSDKTGTLT N ++V K +
Sbjct: 290 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVF 349
Query: 477 IKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFG 536
K V+ ++LL + ++ E + A++
Sbjct: 350 CKGVEK---------------DQVLLFAAMA-----------SRVEN-QDAIDAAMVGM- 381
Query: 537 LLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLN 596
D + R + V PFN V K+ + G + KGA E IL
Sbjct: 382 ---LADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELA----- 433
Query: 597 SNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVG 656
+ + I+K+A LR+L +A + + P + +G++
Sbjct: 434 ------KASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKES---PGAPWEFVGLLP 484
Query: 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA---IEGPEFR 713
+ DP R E++ + G+ V+M+TGD + K R G+ T+ + + +
Sbjct: 485 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDA 544
Query: 714 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773
+ + +LI K A P K+ +VK L+ +V +TGDG NDAPAL +ADIG+
Sbjct: 545 NLASIPVEELIEKADGFAGVFPEHKYEIVKKLQER-KHIVGMTGDGVNDAPALKKADIGI 603
Query: 774 AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 833
A+ T+ A+ ++D+++ + S I++ R+++ ++ + + +++ + ++ F
Sbjct: 604 AVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT-IRIVFGFM 661
Query: 834 SACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNI 893
L +A +L + ++ D + ++ + S + + +
Sbjct: 662 LIALIWEFDFSAFMVLIIAILND-GTIMTISKDRVKPSPTPDSW--KLKEIFATGVVLGG 718
Query: 894 LG--QSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQL 939
++ F D + L ++
Sbjct: 719 YQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQ 766
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 521 bits (1345), Expect = e-170
Identities = 167/819 (20%), Positives = 345/819 (42%), Gaps = 95/819 (11%)
Query: 126 EKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALV 185
+ L T G+++ E + +R+ YG+N+ E F + ++ A++
Sbjct: 78 DMLQTDTRVGLTSEE--VVQRRRKYGLNQMKEEKENHFLKF-LGFFVGPIQFVMEGAAVL 134
Query: 186 SLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN 245
+ E W D I +LL V +++ +L ++ + V R+
Sbjct: 135 A----AGLEDWV----DFGVICGLLLLNAVVGFVQEFQAGSIVDEL-KKTLALKAVVLRD 185
Query: 246 GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVL-INESSLTGESEPVNVNALNPF 304
G ++I +++PGDI+ + G +PADG V+ + L +++S+LTGES V+ + +
Sbjct: 186 GTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHKGDQ- 244
Query: 305 LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFF 364
+ + + V+ G +++T G T G+ A ++ LNG+ TI+ + +F
Sbjct: 245 VFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFT 304
Query: 365 AVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSL 424
++ + + + ++ILEF + I ++ VP GLP VT ++
Sbjct: 305 LLIVWVSSF---------------YRSNPIVQILEF---TLAITIIGVPVGLPAVVTTTM 346
Query: 425 AFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSK 484
A + KA+V+ L+A E++ +CSDKTGTLT N +++ + D
Sbjct: 347 AVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGVDPED--- 403
Query: 485 GTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQ 544
L+L + ++ + + A L+ L +
Sbjct: 404 ---------------LMLTACLAA----------SRKKKGIDAIDKAFLKS-LKYYPRAK 437
Query: 545 AERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPL 604
+ K+++ PF+ V K++ V+E P+G KGA +L + E P+
Sbjct: 438 SVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVE-------EDHPI 490
Query: 605 NEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG 664
E + +FA+ R+L +A + +GI+ DP R
Sbjct: 491 PEEVDQAYKNKVAEFATRGFRSLGVARKRGEGSW-----------EILGIMPCMDPPRHD 539
Query: 665 VKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEELSK 722
++V ++ G++++M+TGD + A+ +R+ G+ T+ N + + E+
Sbjct: 540 TYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYD 599
Query: 723 LIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782
+ A P K+ +V+ L+ G +VA+TGDG NDAP+L +AD G+A+ ++
Sbjct: 600 FVEAADGFAEVFPQHKYNVVEILQ-QRGYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDA 657
Query: 783 AKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAP 842
A+ +AD++ L I+ K R ++ + +V +++ ++ + L + N
Sbjct: 658 ARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALS-IHLEIFLGLWIAILNRS 716
Query: 843 LTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILG--QSLYQ 900
L ++++ + D + LA+A + + + +LG ++
Sbjct: 717 LNIELVVFIAIFAD-VATLAIAYDNAPYSQTPVKW---NLPKLWGMSV--LLGVVLAVGT 770
Query: 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQL 939
++ + + +G+ + ++ ++F +
Sbjct: 771 WITVTTMYAQGENGGIVQNFG---NMDEVLFLQISLTEN 806
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 1e-43
Identities = 137/587 (23%), Positives = 221/587 (37%), Gaps = 152/587 (25%)
Query: 239 TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNV 298
T V R+G + + ++ GDIV + G+++P DG+ V G S ++ES ++GE PV
Sbjct: 134 TAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDESMISGEPVPVLK 192
Query: 299 NALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358
+ + + T G K+ T VG T +++ + + + P+Q + V
Sbjct: 193 SKGDE-VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 251
Query: 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAI--AVTIVVVAVPEGL 416
L A+ F W + L FA + ++VVA P
Sbjct: 252 PTVLLVAISAFIY---------------WYFIAHAPLL----FAFTTLIAVLVVACPCAF 292
Query: 417 PLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEE 476
LA +L M K L+++ A E T++ DKTGTLT
Sbjct: 293 GLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLT-------------- 338
Query: 477 IKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGT---------- 526
KG P +P G++ E+L
Sbjct: 339 -------KGKPEVTDLVPL---------------------NGDERELLRLAAIAERRSEH 370
Query: 527 PTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEI 586
P AI++ +A ++ + E + + GVV A I
Sbjct: 371 PIAEAIVK---------KALEHGIELGEPEKVEVIAGE-GVV--------------ADGI 406
Query: 587 ILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPT 646
++ + + G V N + +EK EA + +A
Sbjct: 407 LVGN-KRLMEDFGVAVS------NEVELALEKLEREAKTAVIVA---RNGRV-------- 448
Query: 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA 706
GI+ + D ++ K +V + GI V M+TGDN +A+AI+RE +
Sbjct: 449 -----EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL------- 496
Query: 707 IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766
D V+A P K VK L+ EVVA GDG NDAPAL
Sbjct: 497 ----------DL----------VIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPAL 534
Query: 767 HEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813
+AD+G+A+G +G++VA ES D++++ D+ +V + R I
Sbjct: 535 AQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 580
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 167 bits (426), Expect = 3e-43
Identities = 135/585 (23%), Positives = 217/585 (37%), Gaps = 148/585 (25%)
Query: 239 TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNV 298
T V R+G + + ++ GDIV + G+++P DG+ V G S ++ES ++GE PV
Sbjct: 212 TAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLK 270
Query: 299 NALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358
+ + + T G K+ T VG T +++ + + + P+Q + V
Sbjct: 271 SKGDE-VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 329
Query: 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418
L A+ F W + L F + ++VVA P L
Sbjct: 330 PTVLLVAISAFIY---------------WYFIAHAPLL--FAFTTLIAVLVVACPCAFGL 372
Query: 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478
A +L M K L+++ A E T++ DKTGTLT
Sbjct: 373 ATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLT---------------- 416
Query: 479 EVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGT----------PT 528
KG P +P G++ E+L P
Sbjct: 417 -----KGKPEVTDLVPL---------------------NGDERELLRLAAIAERRSEHPI 450
Query: 529 ETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIIL 588
AI++ A ++ + E + GV ++ IL
Sbjct: 451 AEAIVKK---------ALEHGIELGEPEKVEVIAG-EGV---------------VADGIL 485
Query: 589 AACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEG 648
+ + G V N + +EK EA + +A
Sbjct: 486 VGNKRLMEDFGVAVS------NEVELALEKLEREAKTAVIVA---RNGRV---------- 526
Query: 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIE 708
GI+ + D ++ K +V + GI V M+TGDN +A+AI+RE +
Sbjct: 527 ---EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL--------- 574
Query: 709 GPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHE 768
D V+A P K VK L+ EVVA GDG NDAPAL +
Sbjct: 575 --------DL----------VIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQ 614
Query: 769 ADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813
AD+G+A+G +G++VA ES D++++ D+ +V + R I
Sbjct: 615 ADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 658
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 3e-42
Identities = 129/590 (21%), Positives = 220/590 (37%), Gaps = 159/590 (26%)
Query: 242 VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL 301
+ +G ++S+ ++ GD++ + G+++P DG G S ++ES +TGE PV A
Sbjct: 230 IKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF-VDESMVTGEPIPVAKEAS 288
Query: 302 NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIG 361
++ T Q GS M VG T +++ +S+ P+Q +A +
Sbjct: 289 AK-VIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQ----RLADTVSGW- 342
Query: 362 LFF-------AVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEF-FAIAVTIVVVAVP 413
F AV++F V W G L + AV+++++A P
Sbjct: 343 --FVPAVILVAVLSFIV---------------WALLGPQP--ALSYGLIAAVSVLIIACP 383
Query: 414 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 473
L LA +S+ + K L+++ A E M ++ DKTGTLT
Sbjct: 384 CALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLT----------- 432
Query: 474 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGT------- 526
+G P +V + + L
Sbjct: 433 ----------EGHPKLT---------------------RIVTDDFVEDNALALAAALEHQ 461
Query: 527 ---PTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGA 583
P AI+ A+ + + VE F + G V +
Sbjct: 462 SEHPLANAIVHA---------AKEKGLSLGSVEAFEAPT------------GKGVVGQVD 500
Query: 584 SEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAP 643
+ + + +G L E ++ + + +A + +
Sbjct: 501 GHHVAIGNARLMQEHG-------GDNAPLFEKADELRGKGASVMFMA---VDGKT----- 545
Query: 644 IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN 703
+ ++ ++DP++ E++ + +GI + M+TGD+ TA+A+A GI
Sbjct: 546 --------VALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI---- 593
Query: 704 GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDA 763
+ V+A P DK +V L+ G +VA+ GDG NDA
Sbjct: 594 -------------KK----------VVAEIMPEDKSRIVSELKDK-GLIVAMAGDGVNDA 629
Query: 764 PALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813
PAL +ADIG+AMG GT+VA ESA V +L + I + S NI
Sbjct: 630 PALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNI 678
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 129 bits (328), Expect = 8e-34
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
I I D RP +K+ + ++ G+ + +++GD + K +++E I
Sbjct: 128 IASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI------------ 175
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
E + SP DK +++ L+ G V + GDG NDA AL AD+
Sbjct: 176 -----QE----------YYSNLSPEDKVRIIEKLKQN-GNKVLMIGDGVNDAAALALADV 219
Query: 772 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813
+AMG G +++K AD+I++ ++ T++ + K + + I
Sbjct: 220 SVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAI 260
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 127 bits (323), Expect = 6e-33
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 30/162 (18%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
G++ + D +RP +E+++ ++ GI M+TGDN AK +A E G+
Sbjct: 136 SGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL------------ 183
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
D+ A P +K VK ++ V A+ GDG NDAPAL +AD+
Sbjct: 184 -----DD----------YFAEVLPHEKAEKVKEVQQ--KYVTAMVGDGVNDAPALAQADV 226
Query: 772 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813
G+A+G AGT+VA E+AD++++ ++ + + + R Y
Sbjct: 227 GIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKF 267
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 2e-31
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 30/162 (18%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
GI+ + D ++ K +V + GI V M+TGDN +A+AI+RE +
Sbjct: 155 EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL------------ 202
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
D V+A P K VK L+ EVVA GDG NDAPAL +AD+
Sbjct: 203 -----DL----------VIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADL 245
Query: 772 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813
G+A+G +G++VA ES D++++ D+ +V + R I
Sbjct: 246 GIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 286
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 1e-22
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 7/139 (5%)
Query: 524 LGTPTETAILEFGLLLGGDFQAERQASKIVKVE--PFNSVKKQMGVVIELPEGGFRVHCK 581
L +TA+LE + A AS+ K++ PF+ +++M VV+ ++ CK
Sbjct: 32 LKNLLDTAVLEGT----DEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCK 87
Query: 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSAD 641
GA + IL C + + NGE+VPL++ + + + + LR + +A +
Sbjct: 88 GALQEILNVCSQVRH-NGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDY 146
Query: 642 APIPTEGYTCIGIVGIKDP 660
G + D
Sbjct: 147 QRADESDLILEGYIAFLDH 165
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 59.4 bits (145), Expect = 6e-11
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 239 TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNV 298
T V R+G + + ++ GDIV + G+++P DG+ V G S ++ES ++GE PV
Sbjct: 13 TAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLK 71
Query: 299 NALNPFLLSGTKVQNGSCKMLVTTVGMRT 327
+ + + T G K+ T VG T
Sbjct: 72 SKGDE-VFGATINNTGVLKIRATRVGGET 99
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 57.5 bits (139), Expect = 3e-09
Identities = 20/144 (13%), Positives = 42/144 (29%), Gaps = 11/144 (7%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---NGIAIEGPEFREKS 716
+R G +E VA I +++G + N + +
Sbjct: 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW 136
Query: 717 DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776
+ K +++ L ++ + GD D A +D+ A
Sbjct: 137 PH------SCKGTCSNQCGCCKPSVIHELSEPNQYIIMI-GDSVTDVEAAKLSDLCFARD 189
Query: 777 IAGTEVAKESADVIILDDNFSTIV 800
E +++ + + D F I
Sbjct: 190 YLLNECREQNLNHLPYQD-FYEIR 212
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 55.2 bits (132), Expect = 1e-07
Identities = 88/621 (14%), Positives = 162/621 (26%), Gaps = 235/621 (37%)
Query: 501 LLQSIFNNTGGEVVIGEGNKTEILGTPT--ETAILEFGLLLGGDFQAERQASKIVK--VE 556
+ +SI + E+ I+ + + F LL + ++V+ VE
Sbjct: 41 MPKSILSKE--EI-------DHIIMSKDAVSGTLRLFWTLL-------SKQEEMVQKFVE 84
Query: 557 PFNSVKKQMGVVIELPEGGFRVHCKGAS---EIILAACDKFLNSNGEVVPLNEAAVNHLN 613
++ ++ + + S + + D+ N N N V+ L
Sbjct: 85 --EVLRINYKFLMS----PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYN---VSRL- 134
Query: 614 ETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGV-KESVAI- 671
+ K +AL L P + + I G + G K VA+
Sbjct: 135 QPYLKL-RQALLEL----------------RPAKN---VLIDG----V-LGSGKTWVALD 169
Query: 672 -CRSAGITVRM------VTGDNINTAKAIARE----CGILTDNGIA----IEGPEFR-EK 715
C S + +M + N N+ + + + N + + R
Sbjct: 170 VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS 229
Query: 716 SDEELSKLIP---------------------------KIQVMAR-SSPMD-------KHT 740
EL +L+ KI + R D H
Sbjct: 230 IQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHI 289
Query: 741 LVKHLRTTLGE-----VVA-VTGDGTNDAPALHEADIG--LAMGIAGTEVAKESADVIIL 792
+ H TL ++ D P E + I +
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQDLP--REVLTTNPRRLSIIAES----------I 337
Query: 793 DDNFSTIVTVAKWGRSVYINIQKFVQ-FQLTVNV----------VALIVNF-SSACLTGN 840
D +T W ++N K + ++NV L V F SA +
Sbjct: 338 RDGLAT------WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV-FPPSA----H 386
Query: 841 APLTAVQLLWVNM-------IMDTLGALALATEPPNG------DL---MKRSPVGRKGNF 884
P + L+W ++ +++ L +L + P + +K
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEY--- 443
Query: 885 ISNVMWRNILGQSLYQFL----------------IIWYL--------QTRGKAVFR---L 917
+ R+I+ Y ++ +FR L
Sbjct: 444 ---ALHRSIVDH--YNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFL 498
Query: 918 D--------------GPDPDLILNTL----IFNTFVFCQLQRDGKDKR--------LQGY 951
D ILNTL + ++ D K +R L
Sbjct: 499 DFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYIC---DNDPKYERLVNAILDFLPKI 555
Query: 952 TEELCLCSCAHL-HRSFSNNN 971
E L L + +
Sbjct: 556 EENLICSKYTDLLRIALMAED 576
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 2e-06
Identities = 71/485 (14%), Positives = 133/485 (27%), Gaps = 163/485 (33%)
Query: 211 LLVVFVTATSDYKQSLQFKDL---------DREKKKITVQVAR-NGFRRKISIYDLLPGD 260
+L VF + + KD+ E I + +G R +
Sbjct: 21 ILSVFE---DAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEE 77
Query: 261 IVHLCMGDQVPAD-GLFVSGFSVLINESSLTGES---------------EPVNVNALNPF 304
+V + + + + +S + S+ NV+ L P+
Sbjct: 78 MVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPY 137
Query: 305 LLSGTKVQNGSCKM----LVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
L K++ ++ V G+ G GK
Sbjct: 138 L----KLRQALLELRPAKNVLIDGV-------------LG----------------SGK- 163
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSG-----DDALEILEFFAIAVTIVVVAVPEG 415
V V + K+ W + LE+L+ + + +
Sbjct: 164 ----TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDH 219
Query: 416 ---LPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKAC 472
+ L + S+ +++++ K L L VL
Sbjct: 220 SSNIKLRIH-SIQAELRRLLKSKPYENCL-------------------L------VLL-- 251
Query: 473 ICEEIKEVDNSKGTPAFGSSIPASASKLLL----QSIFN----NTGGEVVIGEGNKTEIL 524
V N+K AF S K+LL + + + T + + + T
Sbjct: 252 ------NVQNAKAWNAFNLS-----CKILLTTRFKQVTDFLSAATTTHISLDHHSMTL-- 298
Query: 525 GTPTETAILEFGLLLGGDFQAE-RQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGA 583
TP E L L Q R+ P ++ ++ E R
Sbjct: 299 -TPDEVKSL-LLKYLDCRPQDLPREVLTT---NPR-----RLSIIAES----IRDG---- 340
Query: 584 SEIILAACDKFLNSNGE-VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADA 642
LA D + + N + + + E+++N L + + L + F A
Sbjct: 341 ----LATWDNWKHVNCDKLTTIIESSLNVLEPAEYR---KMFDRLSV--------FPPSA 385
Query: 643 PIPTE 647
IPT
Sbjct: 386 HIPTI 390
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.2 bits (111), Expect = 3e-05
Identities = 45/295 (15%), Positives = 81/295 (27%), Gaps = 98/295 (33%)
Query: 11 DVKAKNTSEEALQRWRKLCG-FVKNRKRRFRFTANLSKRFEAEAIRRSN---QEKFRVAV 66
++K N+ E L+ +KL N R ++N+ R + + + +
Sbjct: 188 NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247
Query: 67 LVSQAALQFIHGL-NLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIA 125
LV L N+ + + A C K L
Sbjct: 248 LV----------LLNVQN----AKAWNAFNLS-C-------------KIL---------- 269
Query: 126 EKLST---SITDGISTSEHLLNRRKEIYGINK---FTESPARG-FWVYVWEALHDM---- 174
L+T +TD +S I + T + Y+ D+
Sbjct: 270 --LTTRFKQVTDFLSA-----ATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREV 322
Query: 175 ---TLMILAVCALVSLVVGIAT-EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKD 230
L++ A S+ G+AT + W D L ++ L V ++Y++ F
Sbjct: 323 LTTNPRRLSIIAE-SIRDGLATWDNWKHVNCDKLTTIIESSLNVL--EPAEYRK--MFDR 377
Query: 231 LD--REKKKITVQV--------------------------ARNGFRRKISIYDLL 257
L I + + ISI +
Sbjct: 378 LSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIY 432
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 5e-05
Identities = 55/411 (13%), Positives = 110/411 (26%), Gaps = 136/411 (33%)
Query: 45 LSKRFEAEAIRRSNQEKFRVAVLV-------SQAALQFIHGLNLSSEYTVPEEVAASGFQ 97
LSK E + I S L + +F+ + L Y + S +
Sbjct: 46 LSKE-EIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEV-LRINY----KFLMSPIK 99
Query: 98 ICPDELGSIVEGHDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTE 157
+ + + ++ +++ + A K + +S + L R+ + +
Sbjct: 100 TEQRQPSMMTRMYIEQRDRLYNDNQVFA-KYN------VSRLQPYLKLRQALLEL----- 147
Query: 158 SPARGFWVYVWEALHDM-----TLMILAVCALVSLVVGIATEG---WPK-GAHDGLGIVM 208
PA+ V + + T + L VC S V + W + V+
Sbjct: 148 RPAK----NV--LIDGVLGSGKTWVALDVCL--SYKVQCKMDFKIFWLNLKNCNSPETVL 199
Query: 209 SILLVVFVTATSDYKQSLQFKDLDREKK-KITVQVARNGFRRKISIYDLLPGDIVHLCMG 267
+L + ++ D K+ + + RR +
Sbjct: 200 EMLQKLLYQIDPNWTSRS-----DHSSNIKLRIHSIQAELRRLLK--------------- 239
Query: 268 DQVPADGLFVSGFSVLINESSLTGESEPV-NVNALNPFLLSGTKVQNGSCKMLVTTVGMR 326
+ + L V L+N V N A N F N SCK+L+TT R
Sbjct: 240 SKPYENCLLV-----LLN----------VQNAKAWNAF--------NLSCKILLTT---R 273
Query: 327 TQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTH 386
+ V + T
Sbjct: 274 FK-----------------------QVTDFLSAAT---TTHISLDHHSMTLTPD------ 301
Query: 387 WTWSGDDALEILEFFAIAVTIVVVAVPE----GLPLAVTLSLAFAMKKMMN 433
E+ + +P P +++ +A +++ +
Sbjct: 302 ---------EVKSLLLKYLDCRPQDLPREVLTTNPRRLSI-IAESIRDGLA 342
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 6e-05
Identities = 86/645 (13%), Positives = 174/645 (26%), Gaps = 202/645 (31%)
Query: 6 NENFSDVKAKNTSEEALQR--WRKLCGFVKNRKRRFRFTANLSKRFE--AEAIRRSNQEK 61
E + + R W L + ++F L ++ I+ ++
Sbjct: 48 KEEIDHIIMSKDAVSGTLRLFW-TLLSKQEEMVQKF-VEEVLRINYKFLMSPIKTEQRQP 105
Query: 62 FRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHG-- 119
+ + + + + + ++Y V + EL K + + G
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL------RPAKNVLIDGVL 159
Query: 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
G G K T + + L+ + + K + FW+ + T++ +
Sbjct: 160 GS-G---K--TWVA-----LDVCLSYKVQ----CKM---DFKIFWLNLKNCNSPETVLEM 201
Query: 180 AVCALVSLVVGIATEGWPKGAH--------DGLGIVMSILLVVFVTATSDYKQSLQFKDL 231
L L+ I + H + + LL + Y+ L L
Sbjct: 202 ----LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL-----KSKPYENCLL--VL 250
Query: 232 D--REKKKITVQVARNGF----R-----RKISIYDLLPGDIV-HLCMGDQVP------AD 273
+ K N F + R + D L H+ +
Sbjct: 251 LNVQNAKAW------NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK 304
Query: 274 GLFVSGFSVLINESSLTGESEPVNVNALNPFLLS--GTKVQNGSCKMLVTTVGMRTQWGK 331
L + + L P V NP LS +++G W
Sbjct: 305 SLLLK--YLDCRPQDL-----PREVLTTNPRRLSIIAESIRDGLA--------TWDNW-- 347
Query: 332 LMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKL---QEGTHWT 388
V + + TII V+ A + +F +L H
Sbjct: 348 --------------KHVNCDKLTTIIES---SLNVLEPAEY-RKMF-DRLSVFPPSAHIP 388
Query: 389 -------WSG---DDALEILEFFAIAVTIVVVAVPEGL------PLAVTL-SLAFAMK-K 430
W D + ++ L +++ S+ +K K
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKL----------HKYSLVEKQPKESTISIPSIYLELKVK 438
Query: 431 MMNDKALVRHLAACETMGSATSICSDKTGTLTTN---------HMTVLKACICEEIKEVD 481
+ N+ AL H + + + SD + H+ K ++
Sbjct: 439 LENEYAL--HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHL-----------KNIE 485
Query: 482 NSKGTPAF-----------------GSSIPASASKL-LLQS-------IFNNTGG-EVVI 515
+ + F ++ AS S L LQ I +N E ++
Sbjct: 486 HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLV 545
Query: 516 GE------GNKTEILGTPTETAILEFGLLLGGDF---QAERQASK 551
+ ++ + T +L L+ + +A +Q +
Sbjct: 546 NAILDFLPKIEENLICSK-YTDLLRIALMAEDEAIFEEAHKQVQR 589
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 2e-07
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 14/85 (16%)
Query: 249 RKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSG 308
++ + + GDI+ + G + P DG + G S +++ES +TGE+ PV G
Sbjct: 35 EQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMPVAKKP-------G 86
Query: 309 TKV------QNGSCKMLVTTVGMRT 327
+ V QNGS + T VG T
Sbjct: 87 STVIAGSINQNGSLLICATHVGADT 111
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 2e-06
Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 19/145 (13%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+ G E V+ + V +G + D + ++
Sbjct: 75 PLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHL--DAAFSNT----LIVENDA 128
Query: 720 LS-KLIPKIQVMARSSPMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLA 774
L+ + + K ++ L+ L + V GDG ND A I +A
Sbjct: 129 LNGLVTGHMMFSHS-----KGEMLLVLQRLLNISKTNTLVV-GDGANDLSMFKHAHIKIA 182
Query: 775 MGIAGTEVAKESADVIILDDNFSTI 799
EV K+ A I + + + I
Sbjct: 183 FN--AKEVLKQHATHCINEPDLALI 205
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A Length = 261 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 4e-06
Identities = 38/156 (24%), Positives = 55/156 (35%), Gaps = 33/156 (21%)
Query: 665 VKESVAICRSAGITVRMVTGDNINTAK----AIARECGILTDNGIAIEGPEF-------- 712
VK A C G+ V NI+ + L N I E
Sbjct: 90 VKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQ 149
Query: 713 -----REKSDEELSKLIPKIQVMARSSPM---------DKHTLVKHLRTTLG----EVVA 754
E+ ++E+ IP ++ R P K + + G E ++
Sbjct: 150 MTPFITEEEEKEVLPSIPTCEIG-RWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMS 208
Query: 755 VTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 790
GDG ND L A IG+AMG A +V K +AD +
Sbjct: 209 F-GDGGNDISMLRHAAIGVAMGQAKEDV-KAAADYV 242
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 4e-06
Identities = 26/148 (17%), Positives = 48/148 (32%), Gaps = 25/148 (16%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
+ PG+ + + ++ G +++G + + + D + E D
Sbjct: 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQL--DYAFSNT----VEIRDNV 232
Query: 720 LS-KLIPKIQVMARSSPMDKHTLVKHLRT-------TLGEVVAVTGDGTNDAPALHEADI 771
L+ + I M+ + L ++A GDG ND P L A
Sbjct: 233 LTDNITLPI--------MNAANKKQTLVDLAARLNIATENIIAC-GDGANDLPMLEHAGT 283
Query: 772 GLAMGIAGTEVAKESADVIILDDNFSTI 799
G+A V +E I F +
Sbjct: 284 GIAWK--AKPVVREKIHHQINYHGFELL 309
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} Length = 268 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 9e-06
Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 33/156 (21%)
Query: 665 VKESVAICRSAGITVRMVTGDNI---NTAKAIARECGILTDNGIAIEGPE---------- 711
++S+ + R V + + + + + GI+ + E
Sbjct: 97 FRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQ 156
Query: 712 ----FREKSDEELSKLIPKIQVMARSSPM---------DKHT----LVKHLRTTLGEVVA 754
F E++++++ L+ + R P+ K T + R + E++A
Sbjct: 157 LCFYFDEEAEQKVMPLLSGLSAT-RWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMA 215
Query: 755 VTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 790
GDG ND P L A IG+AMG A +V + AD +
Sbjct: 216 C-GDGGNDIPMLKAAGIGVAMGNASEKV-QSVADFV 249
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A Length = 258 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 1e-05
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 16/90 (17%)
Query: 714 EKSDEELSKLIPKIQVMARSSPM---------DKHT----LVKHLRTTLGEVVAVTGDGT 760
+ +E + P+ + + R + K +++ L +V A GDG
Sbjct: 152 AEEEEPYVRNYPEFRFV-RWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAF-GDGL 209
Query: 761 NDAPALHEADIGLAMGIAGTEVAKESADVI 790
ND L G+AMG A EV K AD +
Sbjct: 210 NDIEMLSFVGTGVAMGNAHEEV-KRVADFV 238
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 2e-05
Identities = 28/149 (18%), Positives = 55/149 (36%), Gaps = 27/149 (18%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGIAIEGPEFREK 715
P+ P + E VA + G V + +G + + + + D N + I
Sbjct: 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSL--DYAQSNTLEIV------- 228
Query: 716 SDEELS-KLIPKIQVMARSSPMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEAD 770
+L+ +++ ++ V A++ K ++ L VAV GDG ND + A
Sbjct: 229 -SGKLTGQVLGEV-VSAQT----KADILLTLAQQYDVEIHNTVAV-GDGANDLVMMAAAG 281
Query: 771 IGLAMGIAGTEVAKESADVIILDDNFSTI 799
+G+A + A + +
Sbjct: 282 LGVAYH--AKPKVEAKAQTAVRFAGLGGV 308
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 4e-05
Identities = 30/149 (20%), Positives = 60/149 (40%), Gaps = 27/149 (18%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGIAIEGPEFREK 715
G +E++ ++ G V +V+G I + G+ D N + ++
Sbjct: 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGL--DYAFANRLIVK------- 126
Query: 716 SDEELS-KLIPKIQVMARSSPMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEAD 770
D +L+ + ++ + + K +++ + G + VAV GDG ND +A
Sbjct: 127 -DGKLTGDVEGEV-LKENA----KGEILEKIAKIEGINLEDTVAV-GDGANDISMFKKAG 179
Query: 771 IGLAMGIAGTEVAKESADVIILDDNFSTI 799
+ +A + KE AD+ I + I
Sbjct: 180 LKIAFC--AKPILKEKADICIEKRDLREI 206
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 4e-05
Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 10/134 (7%)
Query: 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSK 722
PG++E V+ + + V +++G + + +A + I N A +F + E +
Sbjct: 89 PGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANR-LKFYF--NGEYAG 145
Query: 723 LIPKIQVMARSSPMDKHTLVKHLRTTLG--EVVAVTGDGTNDAPALHEADIGLAM-GIAG 779
K ++K L+ +++ + GDG D A AD + G
Sbjct: 146 FDETQPTAESGG---KGKVIKLLKEKFHFKKIIMI-GDGATDMEACPPADAFIGFGGNVI 201
Query: 780 TEVAKESADVIILD 793
+ K++A I D
Sbjct: 202 RQQVKDNAKWYITD 215
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 8e-05
Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 29/150 (19%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSD 717
+ PG + ++ R G +V+G + +A E + N + I D
Sbjct: 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIV--------D 307
Query: 718 EELS-KLIPKIQVMARSSPMDKHTLVKHLRT-------TLGEVVAVTGDGTNDAPALHEA 769
L+ +++ I +D+ LR + + VAV GDG ND L A
Sbjct: 308 GTLTGRVVGPI--------IDRAGKATALREFAQRAGVPMAQTVAV-GDGANDIDMLAAA 358
Query: 770 DIGLAMGIAGTEVAKESADVIILDDNFSTI 799
+G+A +E AD + T+
Sbjct: 359 GLGIAF--NAKPALREVADASLSHPYLDTV 386
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 26/140 (18%), Positives = 44/140 (31%), Gaps = 23/140 (16%)
Query: 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSK 722
G+KE V ++ G + + +G + + A I +N A+ E SD +
Sbjct: 85 DGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAV---ETIWNSDGSFKE 141
Query: 723 LIPKIQVMARSSPMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLAMGIA 778
L + + G EV+A+ GDG D E IA
Sbjct: 142 LDNSNGA--------CDSKLSAFDKAKGLIDGEVIAI-GDGYTDYQLY-EKGYATK-FIA 190
Query: 779 GTEV-----AKESADVIILD 793
E + + +
Sbjct: 191 YMEHIEREKVINLSKYVARN 210
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 1e-04
Identities = 16/91 (17%), Positives = 26/91 (28%), Gaps = 15/91 (16%)
Query: 718 EELSKLIPKIQVMARSSPM---------DKHTLVKHLRTTLG----EVVAVTGDGTNDAP 764
+ + K + S DK V L+ E++ + GD ND P
Sbjct: 125 DYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVI-GDSNNDMP 183
Query: 765 ALHEADIGLAMGIAGTEVAKESADVIILDDN 795
A T+ K +D +
Sbjct: 184 MFQLPVRKACPANA-TDNIKAVSDFVSDYSY 213
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 Length = 231 | Back alignment and structure |
|---|
Score = 43.2 bits (103), Expect = 1e-04
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 17/98 (17%)
Query: 713 REKSDEELSKLIPKI--QVMARSSPM---------DKHTLVKHLRTTLG----EVVAVTG 757
+ E + ++I ++ ++A S +K + ++ LG EV V G
Sbjct: 118 ETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHV-G 176
Query: 758 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
DG ND A +A+ A + KE+AD + +
Sbjct: 177 DGENDLDAFKVVGYKVAVAQAPKIL-KENADYVTKKEY 213
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 Length = 268 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 2e-04
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 705 IAIEGPEFREKSDEELSKLIPKIQVMARSSP-----MDK--------HTLVKHLRTTLGE 751
+ I+ PE ++ E LS+ + + +S P + K L + + E
Sbjct: 149 LLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEE 208
Query: 752 VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
+V GD ND EA + +AM A +V KE++D++ L +N
Sbjct: 209 IVVF-GDNENDLFMFEEAGLRVAMENAIEKV-KEASDIVTLTNN 250
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 30/120 (25%)
Query: 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGI--------LTDNGIAIEGPEFRE 714
G E V R V +++ ++ + R+ G D+ + G + R+
Sbjct: 72 EGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQ 130
Query: 715 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774
K K V ++ V+A GD ND L EA G+
Sbjct: 131 KDP--------------------KRQSVIAFKSLYYRVIAA-GDSYNDTTMLSEAHAGIL 169
|
| >2l1w_B Vacuolar calcium ATPase BCA1 peptide; calmodulin, calmodulin complex, soybean calmodulin, vacuolar ATPase, metal binding protein; NMR {Glycine max} Length = 26 | Back alignment and structure |
|---|
Score = 37.8 bits (87), Expect = 3e-04
Identities = 15/25 (60%), Positives = 16/25 (64%)
Query: 21 ALQRWRKLCGFVKNRKRRFRFTANL 45
A QRWR VKNR RRFR +NL
Sbjct: 1 ARQRWRSSVSIVKNRARRFRMISNL 25
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 Length = 301 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 3e-04
Identities = 17/99 (17%), Positives = 31/99 (31%), Gaps = 22/99 (22%)
Query: 717 DEELSKLIPKIQ-------VMARSSPM---------DKHTLVKHLRTTLG----EVVAVT 756
E +I ++ + + DK+T + +L +V+ V
Sbjct: 188 PSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVV- 246
Query: 757 GDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
GD ND L A+ A K A ++ +
Sbjct: 247 GDAENDIAMLSNFKYSFAVANATDSA-KSHAKCVLPVSH 284
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} Length = 290 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 4e-04
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 16/102 (15%)
Query: 705 IAIEGPEFREKSDEELSKLIPKIQVMARSSP-----MDK--------HTLVKHLRTTLGE 751
+ + E ++K P + V+ R + + K + L ++ +
Sbjct: 162 EVYTEHDIQHDITETITKAFPAVDVI-RVNDEKLNIVPKGVSKEAGLALVASELGLSMDD 220
Query: 752 VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILD 793
VVA+ G +D P + A +G+AMG A E+ K AD +
Sbjct: 221 VVAI-GHQYDDLPMIELAGLGVAMGNAVPEI-KRKADWVTRS 260
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} Length = 279 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 5e-04
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 15/104 (14%)
Query: 705 IAIEGPEFREKSDEELSKLIPKIQVMARSSPM---------DK----HTLVKHLRTTLGE 751
+ ++ P+ E+ + + + +S+P K LV L T +
Sbjct: 156 MFVDYPQVIEQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADD 215
Query: 752 VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
V+ + GD ND + A +G+AMG A EV KE+A + L +
Sbjct: 216 VMTL-GDQGNDLTMIKYAGLGVAMGNAIDEV-KEAAQAVTLTNA 257
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 Length = 288 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 9e-04
Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 18/99 (18%)
Query: 710 PEFREKSDEELSKL--IPKIQVMARSSP-----MDK--------HTLVKHLRTTLGEVVA 754
F+EK + + + ++ S+ + L K L L E A
Sbjct: 179 SFFKEKLEAGWKRYEHAEDLTLV-SSAEHNFELSSRKASKGQALKRLAKQLNIPLEETAA 237
Query: 755 VTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILD 793
V GD ND L A G+AMG A ++ K AD + L
Sbjct: 238 V-GDSLNDKSMLEAAGKGVAMGNAREDI-KSIADAVTLT 274
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 991 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.93 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.93 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.91 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.91 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.9 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.83 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.73 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.44 | |
| 4aqr_D | 57 | Calcium-transporting ATPase 8, plasma membrane-TY; | 99.38 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.27 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.23 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.19 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.16 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.13 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.09 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.09 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.06 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.0 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.0 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.94 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.94 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.88 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.88 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.88 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.87 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.84 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.83 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.81 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.78 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.77 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.75 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.75 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.73 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.7 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.69 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.63 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.62 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.62 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.54 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.54 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.49 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.48 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.46 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.44 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.44 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.43 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.42 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.41 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.38 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.37 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.37 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.37 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.35 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.31 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.29 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.28 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.28 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.27 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.26 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.21 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.21 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.2 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.2 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.17 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.17 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.16 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.16 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.14 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.14 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.13 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.12 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.1 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.1 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.09 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.08 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.08 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.07 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.02 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.01 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.01 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.97 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.96 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.96 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.93 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.91 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.91 | |
| 2l1w_B | 26 | Vacuolar calcium ATPase BCA1 peptide; calmodulin, | 97.89 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.88 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.87 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.83 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.83 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.82 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.8 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.79 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.79 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.77 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.75 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.73 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.71 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.67 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.64 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.64 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.64 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.61 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.61 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.51 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.43 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.35 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.27 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.25 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.23 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.12 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.06 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.06 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.05 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.05 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.96 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.91 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.91 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.72 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.69 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.67 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.6 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.6 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.52 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.48 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.44 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 96.43 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.41 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 96.24 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.23 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 96.11 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 96.04 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 95.42 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.4 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 95.19 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 95.1 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.1 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 94.96 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 94.92 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 93.81 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 92.33 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 90.51 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 90.11 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 87.87 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 87.5 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 86.74 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 86.43 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 85.58 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 83.56 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 83.31 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 83.16 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-128 Score=1230.79 Aligned_cols=844 Identities=27% Similarity=0.375 Sum_probs=697.7
Q ss_pred hCCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcc---c
Q 001960 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIAT---E 194 (991)
Q Consensus 118 ~~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~---~ 194 (991)
...++++++.|++++..||++++ +++|+++||+|++++++.+++|+.+++||+++++++++++++++++.+... .
T Consensus 55 ~~~~~~~~~~l~~~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~ 132 (1034)
T 3ixz_A 55 QLSVAELEQKYQTSATKGLSASL--AAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEG 132 (1034)
T ss_pred hCCHHHHHHHhCCCcccCCCHHH--HHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhccC
Confidence 45799999999999999999988 999999999999999999999999999999999999999999988765321 1
Q ss_pred CC--CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecc
Q 001960 195 GW--PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPA 272 (991)
Q Consensus 195 ~~--~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPa 272 (991)
++ ...|++++.+++.+++..++..+++++.++..+++.+ ..+.+++|+|||++++|+++||||||||.|++||+|||
T Consensus 133 ~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~-l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPA 211 (1034)
T 3ixz_A 133 DLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKN-LVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPA 211 (1034)
T ss_pred CCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhc-cCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceecC
Confidence 11 1245565544444444444444455544444555554 34568999999999999999999999999999999999
Q ss_pred cEEEEeecceEEecccCCCCCcceeccCC---------CCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCC
Q 001960 273 DGLFVSGFSVLINESSLTGESEPVNVNAL---------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDE 343 (991)
Q Consensus 273 Dgill~g~~l~VDeS~LTGES~pv~k~~~---------~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~ 343 (991)
||+|++|+++.||||+|||||.|+.|..+ .+.+|+||.+.+|.++++|++||.+|++|+|++++.+.+.++
T Consensus 212 D~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~ 291 (1034)
T 3ixz_A 212 DIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEK 291 (1034)
T ss_pred CeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcccccCC
Confidence 99999999899999999999999999642 356899999999999999999999999999999999989999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHH
Q 001960 344 TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLS 423 (991)
Q Consensus 344 t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~ 423 (991)
+|+|+++++++.++..++++++++++++++.. + ..+...+..++++++++||||||++++++
T Consensus 292 tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------~----------~~~~~~~~~~i~l~v~~iPe~Lp~~vti~ 353 (1034)
T 3ixz_A 292 TPIAIEIEHFVDIIAGLAILFGATFFIVAMCI--------G----------YTFLRAMVFFMAIVVAYVPEGLLATVTVC 353 (1034)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------c----------chHHHHHHHHHHHHHheeccccHHHHHHH
Confidence 99999999999999888877777666654321 0 03567888999999999999999999999
Q ss_pred HHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHH
Q 001960 424 LAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQ 503 (991)
Q Consensus 424 l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 503 (991)
+++++++|+++|++||+++++|+||++++||||||||||+|+|+|.+++..+..+..+..............+....+..
T Consensus 354 la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 433 (1034)
T 3ixz_A 354 LSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCR 433 (1034)
T ss_pred HHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877654332111110011112233445566
Q ss_pred HHHhcCCCceeecCCC----ceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCC---CeE
Q 001960 504 SIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE---GGF 576 (991)
Q Consensus 504 ~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~---~~~ 576 (991)
.+..|+++....+++. .....|+|+|.|+++++...+.+....+..+++++.+||+|+||+|++++..++ +++
T Consensus 434 ~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~ 513 (1034)
T 3ixz_A 434 VLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRH 513 (1034)
T ss_pred HHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccE
Confidence 7777777765543322 345689999999999999888888888889999999999999999998887543 678
Q ss_pred EEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCC--------CCCCCCCCC
Q 001960 577 RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS--------ADAPIPTEG 648 (991)
Q Consensus 577 ~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~--------~~~~~~e~~ 648 (991)
.+++|||||.|+++|+.+. .+|...|++++.++.+.+.+++|+.+|+||+++|||.++++.. +..+..|+|
T Consensus 514 ~l~~KGApe~il~~c~~~~-~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~ 592 (1034)
T 3ixz_A 514 VLVMKGAPERVLERCSSIL-IKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSG 592 (1034)
T ss_pred EEEEeCChHHHHHHhHHhh-cCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccC
Confidence 9999999999999999876 4677889999999999999999999999999999999875311 112345889
Q ss_pred cEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc------------------------
Q 001960 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG------------------------ 704 (991)
Q Consensus 649 l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~------------------------ 704 (991)
++|+|+++++||+||+++++|++|+++||+|+|+|||+..||.++|+++||..++.
T Consensus 593 l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 672 (1034)
T 3ixz_A 593 LSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARA 672 (1034)
T ss_pred cEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccce
Confidence 99999999999999999999999999999999999999999999999999975432
Q ss_pred eeeeCcccccCCHHHHhhhcccc--ceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHH
Q 001960 705 IAIEGPEFREKSDEELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (991)
Q Consensus 705 ~vi~g~~~~~~~~~~~~~~~~~~--~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ 782 (991)
.+++|.++..++++++.+.+.+. .+++|++|+||.++|+.+|+. |++|+|+|||.||+|||++||+|||||++|+|+
T Consensus 673 ~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~-g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~ 751 (1034)
T 3ixz_A 673 CVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRL-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDA 751 (1034)
T ss_pred eEEecHhhhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHc-CCEEEEECCcHHhHHHHHHCCeeEEeCCccCHH
Confidence 47889999999999988887655 499999999999999999998 999999999999999999999999999999999
Q ss_pred HHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHH
Q 001960 783 AKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALA 862 (991)
Q Consensus 783 ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~la 862 (991)
+|++||+|+.+|||++++.++++||++|+||+|+++|++++|+..+++.+++.++..+.||+++|+||+|+++|++|+++
T Consensus 752 aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~pala 831 (1034)
T 3ixz_A 752 AKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVS 831 (1034)
T ss_pred HHHhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988888899999999999999999999999
Q ss_pred hccCCCCccccccCCCCC-CCCCcCHHHHHHHHH-HHHHHHHHHHHHHHhcc--------cccccCC-------CC----
Q 001960 863 LATEPPNGDLMKRSPVGR-KGNFISNVMWRNILG-QSLYQFLIIWYLQTRGK--------AVFRLDG-------PD---- 921 (991)
Q Consensus 863 l~~e~~~~~l~~~~P~~~-~~~~~~~~~~~~i~~-~~~~~~~~~~~l~~~~~--------~~~~~~~-------~~---- 921 (991)
|++|||++++|+|||+++ +++++++.++..++. .++++++..++.+|... .++++.. .+
T Consensus 832 l~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1034)
T 3ixz_A 832 LAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDS 911 (1034)
T ss_pred hhcCCCChhhhhCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccc
Confidence 999999999999999987 689999998776544 36666655444333211 1111110 00
Q ss_pred ------------cccchhHHHHHHHHHHHHHHHHhhccccccch--------------------hhhhhccccccccccc
Q 001960 922 ------------PDLILNTLIFNTFVFCQLQRDGKDKRLQGYTE--------------------ELCLCSCAHLHRSFSN 969 (991)
Q Consensus 922 ------------~~~~~~t~~f~~~v~~q~~n~~~~r~~~~~~~--------------------~l~~~~~~~~~~~~~~ 969 (991)
.....+|++|+++|++|+||.||||+.+.+.+ .+...|.+++...|.+
T Consensus 912 ~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~f~~ 991 (1034)
T 3ixz_A 912 YGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIFNF 991 (1034)
T ss_pred cccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHHHHHHhhhHHHHhcC
Confidence 00126899999999999999999998543211 1123344555556666
Q ss_pred CccccceeeeecCcc
Q 001960 970 NNHRAPGYICKYNSS 984 (991)
Q Consensus 970 ~~~~n~~~~~~~~~~ 984 (991)
.+....+|..++..+
T Consensus 992 ~~l~~~~w~~~~~~~ 1006 (1034)
T 3ixz_A 992 MPIRFQWWLVPMPFG 1006 (1034)
T ss_pred CCCCHHHHHHHHHHH
Confidence 776666666555443
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-128 Score=1222.58 Aligned_cols=844 Identities=28% Similarity=0.390 Sum_probs=696.1
Q ss_pred hCCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcc-cCC
Q 001960 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIAT-EGW 196 (991)
Q Consensus 118 ~~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~-~~~ 196 (991)
...++++++.|+++...||++++ +++|+++||+|+++.++.+|+|+.++++|+++++++|++++++|++++... ...
T Consensus 50 ~~~~~~~~~~l~t~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~ 127 (1028)
T 2zxe_A 50 KLSLDELHNKYGTDLTRGLTNAR--AKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATE 127 (1028)
T ss_dssp SSCHHHHHHHHTCCSSSCBCHHH--HHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred hCCHHHHHHHhCcCccCCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccc
Confidence 35789999999999999999877 999999999999999889999999999999999999999999998875432 001
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecc
Q 001960 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQ----FKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPA 272 (991)
Q Consensus 197 ~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~----~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPa 272 (991)
...+.+.....++++++++++++.++.|+++ .++|.+ ..+..++|+|||++++|+++||||||||.|++||+|||
T Consensus 128 ~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~-l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPa 206 (1028)
T 2zxe_A 128 DEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKN-MVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPA 206 (1028)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHT-TSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCS
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeec
Confidence 1112222223334555666667667666654 344443 45679999999999999999999999999999999999
Q ss_pred cEEEEeecceEEecccCCCCCcceeccCCC---------CeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCC
Q 001960 273 DGLFVSGFSVLINESSLTGESEPVNVNALN---------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDE 343 (991)
Q Consensus 273 Dgill~g~~l~VDeS~LTGES~pv~k~~~~---------~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~ 343 (991)
||+|++|++|.||||+|||||.|+.|..++ +++|+||.|.+|.++++|++||.+|++|+|++++.+++.++
T Consensus 207 D~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 286 (1028)
T 2zxe_A 207 DLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGR 286 (1028)
T ss_dssp EEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCCC
T ss_pred eEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCCCCCC
Confidence 999999988999999999999999997543 47999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHH
Q 001960 344 TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLS 423 (991)
Q Consensus 344 t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~ 423 (991)
+|+|+.+++++.++..++++++++++++++. . +. .+...+..++++++++||||||++++++
T Consensus 287 t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~---~-----~~----------~~~~~~~~~i~llv~~iP~~Lp~~vti~ 348 (1028)
T 2zxe_A 287 TPIAIEIEHFIHIITGVAVFLGVSFFILSLI---L-----GY----------SWLEAVIFLIGIIVANVPEGLLATVTVC 348 (1028)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---T-----TC----------CHHHHHHHHHHHHHHHSCTTHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---c-----cC----------cHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 9999999999999998888877777665321 1 00 1345677888999999999999999999
Q ss_pred HHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHH
Q 001960 424 LAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQ 503 (991)
Q Consensus 424 l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 503 (991)
++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|++++..+..+..+.............++..+.+..
T Consensus 349 l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 428 (1028)
T 2zxe_A 349 LTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSR 428 (1028)
T ss_dssp HHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHH
T ss_pred HHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877654322110000000111233444556
Q ss_pred HHHhcCCCceeecCCC----ceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeC---CCeE
Q 001960 504 SIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP---EGGF 576 (991)
Q Consensus 504 ~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~---~~~~ 576 (991)
..+.||++.++.+.++ .....|||+|.|+++++...+.+....+..+++++.+||+|+||||+++++.+ ++++
T Consensus 429 ~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~ 508 (1028)
T 2zxe_A 429 IAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRY 508 (1028)
T ss_dssp HHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCE
T ss_pred HHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcE
Confidence 6777877766433221 23568999999999999887667777778899999999999999999999864 4678
Q ss_pred EEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCC--------CCCCCCCCC
Q 001960 577 RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS--------ADAPIPTEG 648 (991)
Q Consensus 577 ~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~--------~~~~~~e~~ 648 (991)
.+++|||||.|+++|+++. .+|...+++++.++.+.+.+++|+++|+||+++|||+++++.. +..+..|.|
T Consensus 509 ~~~~KGA~e~il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~ 587 (1028)
T 2zxe_A 509 LLVMKGAPERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTD 587 (1028)
T ss_dssp EEEEEECHHHHHTTEEEEC-BTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSS
T ss_pred EEEEeCCcHHHHHHhhhhh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcC
Confidence 8999999999999999764 5778889999999999999999999999999999999865311 112345789
Q ss_pred cEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC------------------------c
Q 001960 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN------------------------G 704 (991)
Q Consensus 649 l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~------------------------~ 704 (991)
++|+|+++++||+||+++++|++|+++||+++|+|||+..||.++|++|||..++ .
T Consensus 588 l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 667 (1028)
T 2zxe_A 588 LCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKA 667 (1028)
T ss_dssp EEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCE
T ss_pred eEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccce
Confidence 9999999999999999999999999999999999999999999999999998542 3
Q ss_pred eeeeCcccccCCHHHHhhhccccc--eEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHH
Q 001960 705 IAIEGPEFREKSDEELSKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (991)
Q Consensus 705 ~vi~g~~~~~~~~~~~~~~~~~~~--v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ 782 (991)
.+++|+++..+.++++++++.++. +|||++|+||..+|+.+|+. |++|+|+|||.||+|||++||||||||++|+|+
T Consensus 668 ~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ 746 (1028)
T 2zxe_A 668 CVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGISGSDV 746 (1028)
T ss_dssp EEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEESSSCCHH
T ss_pred EEEEcHHhhhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhC-CCEEEEEcCCcchHHHHHhCCceEEeCCccCHH
Confidence 578999999999999998887764 99999999999999999998 999999999999999999999999999889999
Q ss_pred HHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHH
Q 001960 783 AKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALA 862 (991)
Q Consensus 783 ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~la 862 (991)
||++||+++.+|+|++|++++++||++|+||++++.|++++|+..++..+++.++..+.|++++|++|+|+++|++|+++
T Consensus 747 ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~a 826 (1028)
T 2zxe_A 747 SKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAIS 826 (1028)
T ss_dssp HHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHH
T ss_pred HHHhcCEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888888888899999999999999999999999
Q ss_pred hccCCCCccccccCCCCCCC-CCcCHHHHHH-HHHHHHHHHHHHHHHHHh-----cc---c-------ccccCCC-----
Q 001960 863 LATEPPNGDLMKRSPVGRKG-NFISNVMWRN-ILGQSLYQFLIIWYLQTR-----GK---A-------VFRLDGP----- 920 (991)
Q Consensus 863 l~~e~~~~~l~~~~P~~~~~-~~~~~~~~~~-i~~~~~~~~~~~~~l~~~-----~~---~-------~~~~~~~----- 920 (991)
|++|+|++++|+|||++++. +++++.++.. ++..+++++++.|+.++. +. . ++.....
T Consensus 827 l~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 906 (1028)
T 2zxe_A 827 LAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDS 906 (1028)
T ss_dssp GGGCCCSSCGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECT
T ss_pred hccCccchhhhccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccc
Confidence 99999999999999997665 9999998776 445578877666554432 11 0 1110000
Q ss_pred -Cc----------ccchhHHHHHHHHHHHHHHHHhhccccccch-------------------hhhhhcccccccccccC
Q 001960 921 -DP----------DLILNTLIFNTFVFCQLQRDGKDKRLQGYTE-------------------ELCLCSCAHLHRSFSNN 970 (991)
Q Consensus 921 -~~----------~~~~~t~~f~~~v~~q~~n~~~~r~~~~~~~-------------------~l~~~~~~~~~~~~~~~ 970 (991)
.. ....+|++|+++|++|+||.+|||+.....+ .+.+.|.+++...|.+.
T Consensus 907 ~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~ 986 (1028)
T 2zxe_A 907 FGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALRMY 986 (1028)
T ss_dssp TSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHHHHTCCC
T ss_pred cccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHHHHhhhHHhhhcCC
Confidence 00 0146899999999999999999997543210 11123333445556667
Q ss_pred ccccceeeeecCcc
Q 001960 971 NHRAPGYICKYNSS 984 (991)
Q Consensus 971 ~~~n~~~~~~~~~~ 984 (991)
+....+|..++..+
T Consensus 987 ~l~~~~w~~~~~~~ 1000 (1028)
T 2zxe_A 987 PLKPSWWFCAFPYS 1000 (1028)
T ss_dssp CCCGGGGGTTHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 77777776554443
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-126 Score=1206.05 Aligned_cols=818 Identities=30% Similarity=0.419 Sum_probs=681.8
Q ss_pred hCCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCC-
Q 001960 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGW- 196 (991)
Q Consensus 118 ~~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~- 196 (991)
...++++++.|+++...||++++ +++|+++||+|+++.++++++|+.+++||+++++++|++++++++++++...+.
T Consensus 7 ~~~~~~~~~~l~~~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~ 84 (995)
T 3ar4_A 7 SKSTEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEE 84 (995)
T ss_dssp GSCHHHHHHHHTCCTTTCBCHHH--HHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSG
T ss_pred hCCHHHHHHHhCCCcccCCCHHH--HHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 34689999999999999999877 999999999999999889999999999999999999999999999998765321
Q ss_pred -CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCe--EEEeecCCcccCcEEEeCCCCeeccc
Q 001960 197 -PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGF--RRKISIYDLLPGDIVHLCMGDQVPAD 273 (991)
Q Consensus 197 -~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~--~~~I~~~dLvvGDIV~l~~Gd~VPaD 273 (991)
...|++++.+++.+++..+++.+.+++.+++.++|.+ ..+.+++|+|||+ .++|+++||+|||+|.|++||+||||
T Consensus 85 ~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~-~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD 163 (995)
T 3ar4_A 85 TITAFVEPFVILLILIANAIVGVWQERNAENAIEALKE-YEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPAD 163 (995)
T ss_dssp GGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGG-GSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSE
T ss_pred chhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHc-cCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCccccc
Confidence 2368888777666555555666666655556666665 4566999999887 69999999999999999999999999
Q ss_pred EEEEee--cceEEecccCCCCCcceeccCC------------CCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCC
Q 001960 274 GLFVSG--FSVLINESSLTGESEPVNVNAL------------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 339 (991)
Q Consensus 274 gill~g--~~l~VDeS~LTGES~pv~k~~~------------~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~ 339 (991)
|+|+++ .+|.||||+|||||.|+.|..+ ++.+|+||.|.+|.++++|++||.+|++|+|++++.++
T Consensus 164 ~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 243 (995)
T 3ar4_A 164 IRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAAT 243 (995)
T ss_dssp EEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTC
T ss_pred EEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhcC
Confidence 999654 4689999999999999999754 26899999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHH
Q 001960 340 GDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419 (991)
Q Consensus 340 ~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~la 419 (991)
+.+++|+|+++++++.++.++++++++++++++...+ .....+. .....+..+|..++++++++||||||++
T Consensus 244 ~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~~~~ai~l~v~aiP~~Lp~~ 315 (995)
T 3ar4_A 244 EQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHF--NDPVHGG------SWIRGAIYYFKIAVALAVAAIPEGLPAV 315 (995)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGG--GSCSSSS------CHHHHHHHHHHHHHHHHHHHSCTTHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccccccc------hHHHHHHHHHHHHHHHHHHhcCcchHHH
Confidence 9999999999999999998887776666554322111 0000000 0112345667789999999999999999
Q ss_pred HHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeee---------eecCCCCCCCCC
Q 001960 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK---------EVDNSKGTPAFG 490 (991)
Q Consensus 420 v~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~---------~~~~~~~~~~~~ 490 (991)
++++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|++++..+..+ ..+.....+...
T Consensus 316 vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 395 (995)
T 3ar4_A 316 ITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGE 395 (995)
T ss_dssp HHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCC
T ss_pred HHHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccc
Confidence 99999999999999999999999999999999999999999999999999998764321 111110001000
Q ss_pred --------CCCChhHHHHHHHHHHhcCCCceeecC-CCceeecCChhhHHHHHHHHHcCC-Ch--H-------------H
Q 001960 491 --------SSIPASASKLLLQSIFNNTGGEVVIGE-GNKTEILGTPTETAILEFGLLLGG-DF--Q-------------A 545 (991)
Q Consensus 491 --------~~~~~~~~~~l~~~i~~~~~~~~~~~~-~~~~~~~g~p~e~All~~a~~~g~-~~--~-------------~ 545 (991)
.....+....+......|+++.+..++ ++..+..|||+|.|++.++.+.|. +. . .
T Consensus 396 ~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~ 475 (995)
T 3ar4_A 396 VLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSV 475 (995)
T ss_dssp EEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHH
T ss_pred cccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhh
Confidence 000112233455666778777665432 344556799999999999988775 11 1 1
Q ss_pred HhhhcceEEEecCCCCCceEEEEEEeCCC-----eEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHH-
Q 001960 546 ERQASKIVKVEPFNSVKKQMGVVIELPEG-----GFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKF- 619 (991)
Q Consensus 546 ~~~~~~il~~~pF~s~~k~msviv~~~~~-----~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~- 619 (991)
.+..+++++.+||+|+|||||++++.+++ ++.+++|||||.|+++|+++... +...|++++.++.+.+.+++|
T Consensus 476 ~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~-~~~~~l~~~~~~~~~~~~~~~~ 554 (995)
T 3ar4_A 476 IRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVG-TTRVPMTGPVKEKILSVIKEWG 554 (995)
T ss_dssp HHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEET-TEEEECCHHHHHHHHHHHHHHH
T ss_pred hhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcC-CCcccCCHHHHHHHHHHHHHHH
Confidence 34678999999999999999999987655 67899999999999999987653 467789999999999999999
Q ss_pred -HHcccceeeeeEEecCCCCCC-------CCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHH
Q 001960 620 -ASEALRTLCLACMEIGNEFSA-------DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAK 691 (991)
Q Consensus 620 -a~~glR~l~~A~~~l~~~~~~-------~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~ 691 (991)
+++|+||+++|||+++..... ..+..|+|++|+|+++++||+||+++++|+.|+++||+++|+|||+..||.
T Consensus 555 ~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~ 634 (995)
T 3ar4_A 555 TGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAI 634 (995)
T ss_dssp HSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHH
T ss_pred hhhccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHH
Confidence 999999999999988643211 012247899999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCccCC----ceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhh
Q 001960 692 AIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALH 767 (991)
Q Consensus 692 ~ia~~~gi~~~~----~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~ 767 (991)
++|+++||...+ +.+++|+++..++++++.+.+.+..+|||++|+||.++|+.+|++ |++|+|+|||.||+|||+
T Consensus 635 ~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~-g~~v~~~GDG~ND~~alk 713 (995)
T 3ar4_A 635 AICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSY-DEITAMTGDGVNDAPALK 713 (995)
T ss_dssp HHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTT-TCCEEEEECSGGGHHHHH
T ss_pred HHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHC-CCEEEEEcCCchhHHHHH
Confidence 999999997643 368999999999999999999999999999999999999999999 999999999999999999
Q ss_pred hCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHH
Q 001960 768 EADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQ 847 (991)
Q Consensus 768 ~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~q 847 (991)
+||+||||| +|+++|+++||+++.+|+|.+++++++|||++|+||+|++.|++++|+..++..++++++..+.||+++|
T Consensus 714 ~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~q 792 (995)
T 3ar4_A 714 KAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQ 792 (995)
T ss_dssp HSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHH
T ss_pred HCCeEEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHH
Confidence 999999999 9999999999999999999999999999999999999999999999999988888888888889999999
Q ss_pred HHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHH--Hhc--cc-----cccc-
Q 001960 848 LLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQ--TRG--KA-----VFRL- 917 (991)
Q Consensus 848 ll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~--~~~--~~-----~~~~- 917 (991)
++|+|+++|++|+++|+++||++++|++||+.++++++++.+++.++.++++++++.++.+ ++. .. +..+
T Consensus 793 il~~nl~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (995)
T 3ar4_A 793 LLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLT 872 (995)
T ss_dssp HHHHHHTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGG
T ss_pred HHHHHHHHHHHHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhc
Confidence 9999999999999999999999999999999999999999999889899999987654322 110 00 0000
Q ss_pred -----CC--CC---------cccchhHHHHHHHHHHHHHHHHhhcccc
Q 001960 918 -----DG--PD---------PDLILNTLIFNTFVFCQLQRDGKDKRLQ 949 (991)
Q Consensus 918 -----~~--~~---------~~~~~~t~~f~~~v~~q~~n~~~~r~~~ 949 (991)
++ .. .....+|++|+++|++|+||.+|||+..
T Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~ 920 (995)
T 3ar4_A 873 HFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSEN 920 (995)
T ss_dssp GCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSS
T ss_pred cccccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHhhccc
Confidence 00 00 0124689999999999999999998754
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-118 Score=1103.42 Aligned_cols=734 Identities=22% Similarity=0.350 Sum_probs=602.9
Q ss_pred HHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchh
Q 001960 124 IAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDG 203 (991)
Q Consensus 124 ~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~~~d~ 203 (991)
+++.|+++...||++++ +++|+++||+|+++.++ +++|+.++++|+++++++++++++++++++ .|.++
T Consensus 76 ~~~~l~t~~~~GLs~~e--a~~r~~~~G~N~l~~~~-~~~~~~~l~~f~~~~~~ll~~aai~s~~~g--------~~~~~ 144 (920)
T 1mhs_A 76 PEDMLQTDTRVGLTSEE--VVQRRRKYGLNQMKEEK-ENHFLKFLGFFVGPIQFVMEGAAVLAAGLE--------DWVDF 144 (920)
T ss_dssp SSTTTTTCCCCCCCSHH--HHHHHHHTSSSSCCCCC-CSSHHHHTHHHHHHHHHHHHHHHHHCTTCS--------CSSHH
T ss_pred HHHHhCCCcCCCCCHHH--HHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hHHHH
Confidence 35578999889999987 99999999999998654 678889999999999999999999887764 57787
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecc-e
Q 001960 204 LGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS-V 282 (991)
Q Consensus 204 ~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~-l 282 (991)
..+++.+++..++..+.+++.+++.++|.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||+|++|++ +
T Consensus 145 ~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l-~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l 223 (920)
T 1mhs_A 145 GVICGLLLLNAVVGFVQEFQAGSIVDELKKT-LALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFL 223 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTC-CCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCcee
Confidence 7666555666667777777777777777653 4568999999999999999999999999999999999999999985 8
Q ss_pred EEecccCCCCCcceeccCCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHH
Q 001960 283 LINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGL 362 (991)
Q Consensus 283 ~VDeS~LTGES~pv~k~~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l 362 (991)
.||||+|||||.|+.|..++ .+|+||.|.+|.++++|++||.+|++|+|.+++.+++.+++|+|+.+++++.++..+.+
T Consensus 224 ~VDES~LTGES~PV~K~~gd-~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~ 302 (920)
T 1mhs_A 224 QVDQSALTGESLAVDKHKGD-QVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVI 302 (920)
T ss_dssp EEBCTTTSSCCCCEECCSSC-EECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred eeeccccCCCCcceEecCCC-eeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHH
Confidence 99999999999999998765 69999999999999999999999999999999999888899999999999988876655
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccch
Q 001960 363 FFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLA 442 (991)
Q Consensus 363 ~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~ 442 (991)
++++++++.+ .+... .+...+..++++++++||||||+++|++++.++.+|+++|++||+++
T Consensus 303 ~~~~i~~~~~---------------~~~~~---~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~ 364 (920)
T 1mhs_A 303 FTLLIVWVSS---------------FYRSN---PIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLS 364 (920)
T ss_dssp HHHHHHHHTT---------------TTTTC---CHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTT
T ss_pred HHHHHHHHHH---------------HhcCC---cHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCc
Confidence 5444333211 11111 25577888999999999999999999999999999999999999999
Q ss_pred hhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCCcee
Q 001960 443 ACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTE 522 (991)
Q Consensus 443 ~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~ 522 (991)
++|+||++|+||||||||||+|+|+|.+++..+.. .+++ ++ ...+.|+... ..
T Consensus 365 aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~---------------~~~~---ll-~~a~l~~~~~----~~---- 417 (920)
T 1mhs_A 365 AIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGV---------------DPED---LM-LTACLAASRK----KK---- 417 (920)
T ss_dssp THHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCC---------------CCTH---HH-HHHHHSCCCS----SC----
T ss_pred hhhhhccCcEEEECCCCCccccceeEEEEeecCCC---------------CHHH---HH-HHHHHhcCCc----cc----
Confidence 99999999999999999999999999887643211 0111 22 2334443321 00
Q ss_pred ecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeee
Q 001960 523 ILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVV 602 (991)
Q Consensus 523 ~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~ 602 (991)
.+||+|.|+++++.+.+.. ......+++++.+||+|.+|+|+++++.++++..+++|||||.++++|+. ..
T Consensus 418 -~~~P~e~Al~~~~~~~~~~-~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~-------~~ 488 (920)
T 1mhs_A 418 -GIDAIDKAFLKSLKYYPRA-KSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEE-------DH 488 (920)
T ss_dssp -SCCSHHHHHHHHHHHSSSC-CGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCC-------SS
T ss_pred -CCChHHHHHHHHHHhcccc-hhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccc-------cC
Confidence 2499999999998776542 22345688999999999999999999877777788999999999999974 13
Q ss_pred cCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEE
Q 001960 603 PLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMV 682 (991)
Q Consensus 603 ~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~ml 682 (991)
+++++.++.+.+.+++|+++|+||+++||+. .|.+++++|+++++||+||+++++|++|+++||+++|+
T Consensus 489 ~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~-----------~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~Mi 557 (920)
T 1mhs_A 489 PIPEEVDQAYKNKVAEFATRGFRSLGVARKR-----------GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKML 557 (920)
T ss_dssp CCCHHHHHHHHHHHHHHHTSSCCCCEECCCS-----------SSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEEEec-----------cccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEE
Confidence 5777778889999999999999999999873 14678999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCcc----CCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCC
Q 001960 683 TGDNINTAKAIARECGILT----DNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGD 758 (991)
Q Consensus 683 TGD~~~ta~~ia~~~gi~~----~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGD 758 (991)
|||++.||.+||+++||.. .+..+++|. +.++++++.+.+.+..+|||++|+||.++|+.+|++ |++|+|+||
T Consensus 558 TGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~--~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~-g~~Vam~GD 634 (920)
T 1mhs_A 558 TGDAVGIARETSRQLGLGTNIYNAERLGLGGG--GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQR-GYLVAMTGD 634 (920)
T ss_dssp ESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC--CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTT-TCCCEECCC
T ss_pred cCCCHHHHHHHHHHcCCCccccCccceeecCc--ccCCHHHHHHHHhhCeEEEEeCHHHHHHHHHHHHhC-CCeEEEEcC
Confidence 9999999999999999963 233566666 567788888899999999999999999999999999 999999999
Q ss_pred CCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 001960 759 GTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 838 (991)
Q Consensus 759 G~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~ 838 (991)
|.||+|||++|||||||| +|+++||++||+++++|+|++|++++++||++|+||+|++.|+++.|+....+.++...+.
T Consensus 635 GvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~ 713 (920)
T 1mhs_A 635 GVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAIL 713 (920)
T ss_dssp CGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred CcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 8999999999999999999999999999999999999999999999998754444333344
Q ss_pred CCCChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcccccccC
Q 001960 839 GNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLD 918 (991)
Q Consensus 839 ~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~ 918 (991)
+ .|+++.|++|+|+++|. |+++|++|+++++ +||++++.+- +++.++..+++.++..++.++.... ++..
T Consensus 714 ~-~~l~~~~il~~~l~~d~-~~lal~~e~~~~~---~~P~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~ 783 (920)
T 1mhs_A 714 N-RSLNIELVVFIAIFADV-ATLAIAYDNAPYS---QTPVKWNLPK----LWGMSVLLGVVLAVGTWITVTTMYA-QGEN 783 (920)
T ss_dssp S-CCCCHHHHHHHHHHHTT-HHHHCCCCCSGGG---GSCCCCCSSS----CSSCHHHHHHHHHHHHHHHHHHHTT-TTTT
T ss_pred h-ccCCHHHHHHHHHHHHH-HhhhhcccCcccc---cCCCCchHHH----HHHHHHHHHHHHHHHHHHHHHHHHH-hccc
Confidence 4 34999999999999998 8999999998765 6777554422 2222333444444332222211110 1111
Q ss_pred CC--CcccchhHHHHHHHHHHHHHHHHhhcccc
Q 001960 919 GP--DPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949 (991)
Q Consensus 919 ~~--~~~~~~~t~~f~~~v~~q~~n~~~~r~~~ 949 (991)
+. ......+|++|++++++|+||.+|+|+..
T Consensus 784 ~~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~ 816 (920)
T 1mhs_A 784 GGIVQNFGNMDEVLFLQISLTENWLIFITRANG 816 (920)
T ss_dssp CCSSSSSSSHHHHHHHHHHHHHHHHTTSSSCSS
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHhccch
Confidence 10 11235789999999999999999999754
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-115 Score=1080.00 Aligned_cols=748 Identities=21% Similarity=0.316 Sum_probs=583.9
Q ss_pred CHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCC
Q 001960 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKG 199 (991)
Q Consensus 120 ~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~ 199 (991)
.++++++.|+++ ..||++++ +++|+++||+|+++.++ +++|+.++++|+++++++|+++++++++++.. ++.+..
T Consensus 18 ~~~~~~~~l~~~-~~GLs~~e--~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~-~~~~~~ 92 (885)
T 3b8c_A 18 PIEEVFQQLKCS-REGLTTQE--GEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANG-DGRPPD 92 (885)
T ss_dssp STTCCTTTSSSC-SSCSTHHH--HHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCC-TTSCSC
T ss_pred CHHHHHHHhCCC-CCCCCHHH--HHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccccc
Confidence 456667778887 68999877 99999999999998776 77788899999999999999999999887643 233457
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEee
Q 001960 200 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSG 279 (991)
Q Consensus 200 ~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g 279 (991)
|+|++.|++.+++..++..+.+++.+++.++|.+. .+.+++|+|||++++|+++||+|||+|.|++||+|||||+|++|
T Consensus 93 ~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~-~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g 171 (885)
T 3b8c_A 93 WQDFVGIICLLVINSTISFIEENNAGNAAAALMAG-LAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEG 171 (885)
T ss_dssp CTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTS-CSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEc
Confidence 88887655444444444445555555556666543 45688999999999999999999999999999999999999999
Q ss_pred cceEEecccCCCCCcceeccCCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHH
Q 001960 280 FSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359 (991)
Q Consensus 280 ~~l~VDeS~LTGES~pv~k~~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~ 359 (991)
++|.||||+|||||.|+.|..++ .+|+||.|.+|.++++|++||.+|++|+|.+++++ ..+++|+|+.+++++.++..
T Consensus 172 ~~l~VdES~LTGES~Pv~K~~g~-~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i~~~~~~ 249 (885)
T 3b8c_A 172 DPLKVDQSALTGESLPVTKHPGQ-EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGNFCIC 249 (885)
T ss_dssp SCBCCCCCSTTCCSSCCCBSSCC-CCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHHHHHHHH
T ss_pred CcccccccccCCCCcceEecCCC-ccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-ccccChHHHHHHHHHHHHHH
Confidence 98899999999999999998765 59999999999999999999999999999998877 56779999999999876432
Q ss_pred -HHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhcccccc
Q 001960 360 -IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALV 438 (991)
Q Consensus 360 -~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilv 438 (991)
+++.+++++++++ +. .+. .+...+..++++++++||||||++++++++.++.+|+|+|++|
T Consensus 250 ~~~~~~~~~~~~~~----~~----~~~----------~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilv 311 (885)
T 3b8c_A 250 SIAIGMVIEIIVMY----PI----QRR----------KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 311 (885)
T ss_dssp HHHHHHHHHSTTTT----TT----TCS----------CSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCC
T ss_pred HHHHHHHHHHHHHH----HH----ccC----------cHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 2222222211111 00 000 1124567889999999999999999999999999999999999
Q ss_pred ccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCC
Q 001960 439 RHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEG 518 (991)
Q Consensus 439 r~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 518 (991)
|+++++|+||++|+||||||||||+|+|+|.+.+.. .+. ...++ .+++. ..+.|+..
T Consensus 312 k~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~-----------~~~~~--~~ll~-~aa~~~~~------- 368 (885)
T 3b8c_A 312 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFC-----------KGVEK--DQVLL-FAAMASRV------- 368 (885)
T ss_dssp SSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSC-----------SSTTH--HHHHH-HHHHHCCS-------
T ss_pred CCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--ccC-----------CCCCH--HHHHH-HHHHHhCC-------
Confidence 999999999999999999999999999999642210 000 00111 12222 22333221
Q ss_pred CceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCC
Q 001960 519 NKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSN 598 (991)
Q Consensus 519 ~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~ 598 (991)
.++||+|.|+++++.+ ..+.+..+++++.+||+|.+|||+++++..+++.+.++|||||.++++|+.
T Consensus 369 ----~~~~p~~~Al~~~~~~----~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~----- 435 (885)
T 3b8c_A 369 ----ENQDAIDAAMVGMLAD----PKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKA----- 435 (885)
T ss_dssp ----SSCCSHHHHHHHTTCC----TTCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCC-----
T ss_pred ----CCCCchHHHHHHHhhc----hhhHhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccC-----
Confidence 1579999999987643 112334677889999999999999988766677778999999999999963
Q ss_pred CeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCE
Q 001960 599 GEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGIT 678 (991)
Q Consensus 599 g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~ 678 (991)
+++.++.+.+.+++++++|+|++++||++++++. .+..|++++++|+++++||+||+++++|++|+++||+
T Consensus 436 ------~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~---~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~ 506 (885)
T 3b8c_A 436 ------SNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT---KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVN 506 (885)
T ss_dssp ------CSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS---SSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCC
T ss_pred ------chhhHHHHHHHHHHHHhCCCeEEEEEEecccccc---ccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCc
Confidence 1112234677889999999999999999886532 2456789999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHcCCccC--CceeeeCccccc-CCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEE
Q 001960 679 VRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFRE-KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAV 755 (991)
Q Consensus 679 v~mlTGD~~~ta~~ia~~~gi~~~--~~~vi~g~~~~~-~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~ 755 (991)
++|+|||+..||.++|+++||..+ ...+++|++++. ++++++++.+.+..+++|++|+||.++|+.+|++ |++|+|
T Consensus 507 v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~-g~~Vam 585 (885)
T 3b8c_A 507 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQER-KHIVGM 585 (885)
T ss_dssp CEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHT-TCCCCB
T ss_pred EEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECHHHHHHHHHHHHHC-CCeEEE
Confidence 999999999999999999999642 134677877765 6666777888888999999999999999999998 999999
Q ss_pred eCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 756 TGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSA 835 (991)
Q Consensus 756 iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~ 835 (991)
+|||.||+|||++|||||||| +|+++||++||+++.+|+|++|++++++||++|+||+|++.|++++|+..++..+..
T Consensus 586 ~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~- 663 (885)
T 3b8c_A 586 TGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI- 663 (885)
T ss_dssp CCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHH-
T ss_pred EcCCchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 999999999999999999999 899999999999999999999999999999999999999999999998654433333
Q ss_pred HhcCCCChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccc--
Q 001960 836 CLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKA-- 913 (991)
Q Consensus 836 ~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~-- 913 (991)
....+.|++++|++|+|+++|..+ +++++|++.+. ++| +...+ +.++...+..++++++..+++++.+..
T Consensus 664 ~~~~~~~l~p~~il~i~l~~d~~~-l~l~~~~~~~~---~~p---~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 735 (885)
T 3b8c_A 664 ALIWEFDFSAFMVLIIAILNDGTI-MTISKDRVKPS---PTP---DSWKL-KEIFATGVVLGGYQAIMTVIFFWAAHKTD 735 (885)
T ss_dssp HSSCSSCSCHHHHHHHHHHHHTTT-CCCCCCCCCCS---SCC---CSTTT-TTTTTTHHHHHSSTHHHHTTSSSCTTTTT
T ss_pred HHccCcCcCHHHHHHHHHHHHHHH-HhhcccccCcc---cCC---cchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 334457999999999999999976 88888877552 233 22233 333333445566666655544433221
Q ss_pred ----ccccCCCC-cccch-hHHHHHHHHHHHHHHHHhhccccc
Q 001960 914 ----VFRLDGPD-PDLIL-NTLIFNTFVFCQLQRDGKDKRLQG 950 (991)
Q Consensus 914 ----~~~~~~~~-~~~~~-~t~~f~~~v~~q~~n~~~~r~~~~ 950 (991)
.++++... ..... .++.|.+++++|+ +.||+|+...
T Consensus 736 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~Rs~~~ 777 (885)
T 3b8c_A 736 FFSDTFGVRSIRDNNHELMGAVYLQVSIISQA-LIFVTRSRSW 777 (885)
T ss_dssp TTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGG-GTTCSSSCTT
T ss_pred ccccccCcccccchHHHHHHHHHHHHHHHHHH-HHHHhccCCC
Confidence 11211000 01123 3446667888886 8999997643
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-84 Score=789.56 Aligned_cols=545 Identities=25% Similarity=0.357 Sum_probs=449.8
Q ss_pred CCccHHHHHHHHHhhHHHHHHHH--HHH-HHHH---hhh-----cc------cCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 001960 159 PARGFWVYVWEALHDMTLMILAV--CAL-VSLV---VGI-----AT------EGWPKGAHDGLGIVMSILLVVFVTATSD 221 (991)
Q Consensus 159 ~~~~f~~~~~~~~~~~~~~illi--~ai-~s~~---~~~-----~~------~~~~~~~~d~~~i~~~lllvi~v~~~~~ 221 (991)
.+++|++..|+++++....+..+ .++ .+++ +.+ .. .+..+.|||+.++++.+++ +++
T Consensus 129 ~g~~f~~~a~~~l~~~~~~md~Lv~l~~~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~yfe~a~~ii~~~l------lg~ 202 (736)
T 3rfu_A 129 GGWPFFKRGWQSLKTGQLNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAAVITTLVL------LGQ 202 (736)
T ss_dssp TTHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHCGGGSCSSSSCSSSCCCCCHHHHHHHHHHHH------HHH
T ss_pred hhHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccccccccccCccccHHHHHHHHHHHHH------HHH
Confidence 68899999999998654333221 111 1111 111 11 1223568887765544433 367
Q ss_pred HHHHHHHHHhhh------hcCCcEEEEEe-CCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCc
Q 001960 222 YKQSLQFKDLDR------EKKKITVQVAR-NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 294 (991)
Q Consensus 222 ~~~~~~~~~l~~------~~~~~~v~V~R-~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~ 294 (991)
|.+.+++++..+ ...+..++|+| ||++++|+++||+|||+|.|++||+|||||+|++|++ .||||+|||||.
T Consensus 203 ~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VDES~LTGES~ 281 (736)
T 3rfu_A 203 VLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRS-FVDESMVTGEPI 281 (736)
T ss_dssp HHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECSSCE-EEECSSSTTCSS
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEECce-EeeecccCCccc
Confidence 777776544322 24567888887 9999999999999999999999999999999999985 999999999999
Q ss_pred ceeccCCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 295 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQ 374 (991)
Q Consensus 295 pv~k~~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~ 374 (991)
|+.|..++. +++||.+.+|.++++|++||.+|.+|+|++++.+++.+++|+|+.+|+++.++++++++++++++++|..
T Consensus 282 Pv~K~~gd~-v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~ 360 (736)
T 3rfu_A 282 PVAKEASAK-VIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWAL 360 (736)
T ss_dssp CEEECTTCE-ECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEeccCCc-CCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999987765 9999999999999999999999999999999999999999999999999999999999999998887653
Q ss_pred HHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEE
Q 001960 375 GLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSIC 454 (991)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~ 454 (991)
. . .. . .+...+..++++++++|||+|++++|+++..++.++.++|+++|+++++|+||++|+||
T Consensus 361 ~---~----~~-~--------~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~ 424 (736)
T 3rfu_A 361 L---G----PQ-P--------ALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLV 424 (736)
T ss_dssp H---C----SS-S--------STTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEE
T ss_pred h---C----CC-c--------hHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEE
Confidence 1 0 00 0 12356788999999999999999999999999999999999999999999999999999
Q ss_pred eCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHH
Q 001960 455 SDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 534 (991)
Q Consensus 455 ~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~ 534 (991)
||||||||+|+|+|.+++..+.. .++.+.+. .... ..+.||+++|+++
T Consensus 425 fDKTGTLT~g~~~v~~i~~~~~~----------------~~~~l~~a---a~le-------------~~s~hPla~Aiv~ 472 (736)
T 3rfu_A 425 VDKTGTLTEGHPKLTRIVTDDFV----------------EDNALALA---AALE-------------HQSEHPLANAIVH 472 (736)
T ss_dssp ECCBTTTBCSSCEEEEEEESSSC----------------HHHHHHHH---HHHH-------------HSSCCHHHHHHHH
T ss_pred EeCCCCCcCCceEEEEEEecCCC----------------HHHHHHHH---HHHh-------------hcCCChHHHHHHH
Confidence 99999999999999998732211 11222221 1111 1267999999999
Q ss_pred HHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHH
Q 001960 535 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNE 614 (991)
Q Consensus 535 ~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~ 614 (991)
++.+.+... ....+|++.+++. +....++.. +.+|+++.+.+.+.. ...+.+
T Consensus 473 ~a~~~~~~~---------~~~~~f~~~~g~g-v~~~~~g~~---~~~G~~~~~~~~~~~---------------~~~~~~ 524 (736)
T 3rfu_A 473 AAKEKGLSL---------GSVEAFEAPTGKG-VVGQVDGHH---VAIGNARLMQEHGGD---------------NAPLFE 524 (736)
T ss_dssp HHHTTCCCC---------CCCSCCCCCTTTE-EEECSSSSC---EEEESHHHHHHHCCC---------------CHHHHH
T ss_pred HHHhcCCCc---------cCcccccccCCce-EEEEECCEE---EEEcCHHHHHHcCCC---------------hhHHHH
Confidence 998776543 2345788877763 433444443 346998877654321 123556
Q ss_pred HHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Q 001960 615 TIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA 694 (991)
Q Consensus 615 ~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia 694 (991)
..++++.+|+|++++|+ |.+++|+++++|++||+++++|++|+++|++++|+|||+..+|.++|
T Consensus 525 ~~~~~~~~G~~vl~va~----------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia 588 (736)
T 3rfu_A 525 KADELRGKGASVMFMAV----------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVA 588 (736)
T ss_dssp HHHHHHHTTCEEEEEEE----------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHH
T ss_pred HHHHHHhcCCeEEEEEE----------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH
Confidence 77889999999999985 46899999999999999999999999999999999999999999999
Q ss_pred HHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE
Q 001960 695 RECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (991)
Q Consensus 695 ~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia 774 (991)
+++||.. ++++++|+||.++|+.+|++ |+.|+|+|||.||+|||++||+|||
T Consensus 589 ~~lgi~~---------------------------v~a~~~P~~K~~~v~~l~~~-g~~V~~vGDG~ND~paL~~AdvGIA 640 (736)
T 3rfu_A 589 GTLGIKK---------------------------VVAEIMPEDKSRIVSELKDK-GLIVAMAGDGVNDAPALAKADIGIA 640 (736)
T ss_dssp HHHTCCC---------------------------EECSCCHHHHHHHHHHHHHH-SCCEEEEECSSTTHHHHHHSSEEEE
T ss_pred HHcCCCE---------------------------EEEecCHHHHHHHHHHHHhc-CCEEEEEECChHhHHHHHhCCEEEE
Confidence 9999964 99999999999999999999 9999999999999999999999999
Q ss_pred ecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 775 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 832 (991)
Q Consensus 775 mg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~ 832 (991)
|| +|+|+++++||++++++++.++.+++++||++++||++|+.|++.||+++++++.
T Consensus 641 mg-~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~iplAa 697 (736)
T 3rfu_A 641 MG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPLAA 697 (736)
T ss_dssp ES-SSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eC-CccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99 9999999999999999999999999999999999999999999999999988875
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-84 Score=799.75 Aligned_cols=642 Identities=24% Similarity=0.284 Sum_probs=488.8
Q ss_pred hccchhhhHHHHHhhhhhhhHHHHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhhhhhccCChHHHHhhCCHH
Q 001960 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVE 122 (991)
Q Consensus 43 ~~l~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~v~ 122 (991)
+.+..+.|+.+.+.+++++++||+.+.++.+.|++. ..+..++.+++++.||++.+.+..+..+.++.+.+.+...+.
T Consensus 14 a~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~--~~~~~~i~~ai~~~Gy~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (723)
T 3j09_A 14 AMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEK--RIDFETIKRVIEDLGYGVVDEQAAVSAEVEHLSRMKRKLYVA 91 (723)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTT--TCCHHHHHHHHHHHCCEESSCCCCCCCCCCCCCCSCCCSSST
T ss_pred hHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCC--cCCHHHHHHHHHhcCCcccccccccchhhHHHHHHHHHHHHH
Confidence 356778899999999999999999999999998765 455677888899999988765432211111222121111122
Q ss_pred HHH----HHhCCCcCCCCChhHHHHHHHHHhcCCCcCCC----CCCccHHHHHHHHHhhHHHHH------HHHHHHHHHH
Q 001960 123 GIA----EKLSTSITDGISTSEHLLNRRKEIYGINKFTE----SPARGFWVYVWEALHDMTLMI------LAVCALVSLV 188 (991)
Q Consensus 123 ~~~----~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~----~~~~~f~~~~~~~~~~~~~~i------lli~ai~s~~ 188 (991)
.++ ..+.. .|..+. ..|-.-.+.. ..+.+|++..|+++++....+ -..+|++..+
T Consensus 92 ~~~~~~~~~~~~---~~~~~~--------~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~l~~l~~~~a~~~s~ 160 (723)
T 3j09_A 92 AFAGVLLLFLAH---FISLPY--------EDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLASV 160 (723)
T ss_dssp TTTHHHHHHHTT---SSCSSS--------SCCSCCSTHHHHHHHHHHHHHHHTCCTTTTCSTTSCSSCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---Hhccch--------HHHHHHHHHHHHHHHhHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHH
Confidence 211 11111 011100 0011101101 134566666777766543221 1122222111
Q ss_pred hhhcc-cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------hcCCcEEEEEeCCeEEEeecCCcccCcE
Q 001960 189 VGIAT-EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKITVQVARNGFRRKISIYDLLPGDI 261 (991)
Q Consensus 189 ~~~~~-~~~~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~------~~~~~~v~V~R~G~~~~I~~~dLvvGDI 261 (991)
+.... .+.++.||+..++++.+++ +++|.+++++++.++ ...+..++|+|||++++|+++||+|||+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~i~~~~~------ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDi 234 (723)
T 3j09_A 161 LSTAGVLPREYSFYETSVLLLAFLL------LGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDI 234 (723)
T ss_dssp HHHHTTTTCCCCCCTTHHHHHHHHH------HHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCE
T ss_pred HHHHhhcccchhHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCE
Confidence 11111 1112237887665544333 477777777654322 2467799999999999999999999999
Q ss_pred EEeCCCCeecccEEEEeecceEEecccCCCCCcceeccCCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCC
Q 001960 262 VHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341 (991)
Q Consensus 262 V~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~ 341 (991)
|.|++||+|||||++++|+ +.||||+|||||.|+.|..++ .+|+||.+.+|.++++|+++|.+|.+|+|++++.+++.
T Consensus 235 v~v~~Ge~IPaDg~vl~G~-~~VdeS~LTGES~pv~K~~g~-~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~ 312 (723)
T 3j09_A 235 VIVRPGEKIPVDGVVVEGE-SYVDESMISGEPVPVLKSKGD-EVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMG 312 (723)
T ss_dssp EEECTTCBCCSEEEEEECC-EEEECHHHHCCSSCEEECTTC-EECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCC
T ss_pred EEECCCCEEeeEEEEEECC-eEEecccccCCCcceeecCCC-eeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhc
Confidence 9999999999999999997 599999999999999998766 59999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHH
Q 001960 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVT 421 (991)
Q Consensus 342 ~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~ 421 (991)
+++|+|+.+|+++.++.++.++++++++++|.. . .+. .+...+..++++++++|||+|++++|
T Consensus 313 ~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~---~----~~~----------~~~~~~~~~i~vlvia~P~aL~la~p 375 (723)
T 3j09_A 313 SKPPIQRLADKVVAYFIPTVLLVAISAFIYWYF---I----AHA----------PLLFAFTTLIAVLVVACPCAFGLATP 375 (723)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCS---S----TTC----------TTCCSHHHHHHHHHHHSCTTHHHHHH
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---h----cCC----------cHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 999999999999999999888888777665321 0 000 12234677899999999999999999
Q ss_pred HHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHH
Q 001960 422 LSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLL 501 (991)
Q Consensus 422 ~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 501 (991)
+++..++.++.++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+.. .++.+.+.
T Consensus 376 ~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~----------------~~~~l~~a 439 (723)
T 3j09_A 376 TALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD----------------ERELLRLA 439 (723)
T ss_dssp HHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC----------------HHHHHHHH
T ss_pred HHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCCC----------------HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998875321 11222221
Q ss_pred HHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEE--EE
Q 001960 502 LQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFR--VH 579 (991)
Q Consensus 502 ~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~--~~ 579 (991)
.... ..+.||++.|+++++.+.|...... .+|.+. ++.+.. .+
T Consensus 440 ---a~~e-------------~~s~hP~~~Ai~~~a~~~~~~~~~~---------~~~~~~----------~g~g~~~~~~ 484 (723)
T 3j09_A 440 ---AIAE-------------RRSEHPIAEAIVKKALEHGIELGEP---------EKVEVI----------AGEGVVADGI 484 (723)
T ss_dssp ---HHHH-------------TTCCSHHHHHHHHHHHHTTCCCCSC---------CCCEEE----------TTTEEEETTE
T ss_pred ---HHHh-------------ccCCCchhHHHHHHHHhcCCCcCCc---------cceEEe----------cCCceEEEEE
Confidence 1111 1267999999999998877653211 112111 222221 24
Q ss_pred EcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccC
Q 001960 580 CKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659 (991)
Q Consensus 580 ~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D 659 (991)
.+|+++.+.+... +.. +.+.+.+++++.+|+|++++|+ |++++|+++++|
T Consensus 485 ~~g~~~~~~~~~~----------~~~----~~~~~~~~~~~~~g~~~~~va~----------------~~~~~G~i~i~D 534 (723)
T 3j09_A 485 LVGNKRLMEDFGV----------AVS----NEVELALEKLEREAKTAVIVAR----------------NGRVEGIIAVSD 534 (723)
T ss_dssp EEECHHHHHHTTC----------CCC----HHHHHHHHHHHTTTCEEEEEEE----------------TTEEEEEEEEEC
T ss_pred EECCHHHHHhcCC----------Ccc----HHHHHHHHHHHhcCCeEEEEEE----------------CCEEEEEEeecC
Confidence 5688776544221 111 2356778889999999999984 578999999999
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++||+++++|++|+++|++++|+|||+..+|.++|+++|+.. ++++++|+||.
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~---------------------------~~~~~~P~~K~ 587 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIAEVLPHQKS 587 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCTTCHH
T ss_pred CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE---------------------------EEccCCHHHHH
Confidence 999999999999999999999999999999999999999964 99999999999
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQF 819 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~ 819 (991)
++|+.+|++ +.|+|+|||.||+|||++||+||||| +|++.++++||+++.++++.++.+++++||++|+||++|+.|
T Consensus 588 ~~v~~l~~~--~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~ 664 (723)
T 3j09_A 588 EEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFW 664 (723)
T ss_dssp HHHHHHTTT--CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcC--CeEEEEECChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999976 78999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 001960 820 QLTVNVVALIVNFS 833 (991)
Q Consensus 820 ~l~~n~~~i~~~~~ 833 (991)
+++||++.+++++.
T Consensus 665 a~~~n~~~i~~a~~ 678 (723)
T 3j09_A 665 ALIYNVILIPAAAG 678 (723)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998887764
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-81 Score=758.26 Aligned_cols=499 Identities=26% Similarity=0.347 Sum_probs=417.3
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------hcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecc
Q 001960 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPA 272 (991)
Q Consensus 199 ~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~------~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPa 272 (991)
.||+..++++.+++ ++++.+++++++.++ ...+.+++|+|||++++|+++||+|||+|.|++||+|||
T Consensus 94 ~~~~~~~~i~~~~~------ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPa 167 (645)
T 3j08_A 94 SFYETSVLLLAFLL------LGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPV 167 (645)
T ss_dssp SCCCSHHHHHHHHH------HHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCS
T ss_pred hHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEee
Confidence 47887665544433 477888777654322 246779999999999999999999999999999999999
Q ss_pred cEEEEeecceEEecccCCCCCcceeccCCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHH
Q 001960 273 DGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNG 352 (991)
Q Consensus 273 Dgill~g~~l~VDeS~LTGES~pv~k~~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~ 352 (991)
||++++|+ +.||||+|||||.|+.|..++ .+|+||.+.+|.++++|++||.+|.+|+|++++.+++.+++|+|+.+|+
T Consensus 168 Dg~vl~G~-~~VdeS~LTGES~Pv~K~~g~-~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~ 245 (645)
T 3j08_A 168 DGVVVEGE-SYVDESMISGEPVPVLKSKGD-EVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADK 245 (645)
T ss_dssp EEEEEECC-EEEECHHHHCCSSCEEECTTC-EECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHH
T ss_pred EEEEEECc-EEEEcccccCCCCceecCCCC-EeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHH
Confidence 99999997 599999999999999998766 5999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHh
Q 001960 353 VATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMM 432 (991)
Q Consensus 353 ~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~ 432 (991)
++.++.++.++++++++++|.. . .+.. +...+..++++++++|||+|++++|+++..++.++.
T Consensus 246 ~~~~~~~~vl~~a~~~~~~~~~---~----~~~~----------~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a 308 (645)
T 3j08_A 246 VVAYFIPTVLLVAISAFIYWYF---I----AHAP----------LLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGA 308 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSC---C----CSCS----------CCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---h----cCCc----------HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999888888777665321 0 0100 112356678999999999999999999999999999
Q ss_pred ccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCc
Q 001960 433 NDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGE 512 (991)
Q Consensus 433 ~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~ 512 (991)
++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+.. .++.+.+. ....
T Consensus 309 ~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~----------------~~~~l~~a---a~~e---- 365 (645)
T 3j08_A 309 ELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD----------------ERELLRLA---AIAE---- 365 (645)
T ss_dssp TTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSC----------------HHHHHHHH---HHHH----
T ss_pred HCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCCC----------------HHHHHHHH---HHHh----
Confidence 999999999999999999999999999999999999998875321 11222221 1111
Q ss_pred eeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEE--EEEcCchHHHHHh
Q 001960 513 VVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFR--VHCKGASEIILAA 590 (991)
Q Consensus 513 ~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~--~~~KGa~e~il~~ 590 (991)
..+.||++.|+++++.+.|.+.... .+|.+. ++.+.. .+.+|+++.+.+.
T Consensus 366 ---------~~s~hPla~Aiv~~a~~~g~~~~~~---------~~~~~~----------~g~g~~~~~v~~g~~~~~~~~ 417 (645)
T 3j08_A 366 ---------RRSEHPIAEAIVKKALEHGIELGEP---------EKVEVI----------AGEGVVADGILVGNKRLMEDF 417 (645)
T ss_dssp ---------TTCCSHHHHHHHHHHHHTTCCCCSC---------CCCEEE----------TTTEEEETTEEEECHHHHHHT
T ss_pred ---------hcCCChhHHHHHHHHHhcCCCcCCc---------cceEEe----------cCCceEEEEEEECCHHHHHhc
Confidence 1267999999999998887653211 112111 122221 2456887765442
Q ss_pred ccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHH
Q 001960 591 CDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVA 670 (991)
Q Consensus 591 c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~ 670 (991)
.. +.. +.+.+..++++.+|+|++++|+ |++++|+++++|++||+++++|+
T Consensus 418 ~~----------~~~----~~~~~~~~~~~~~g~~~l~va~----------------~~~~~G~i~~~D~l~~~~~~~i~ 467 (645)
T 3j08_A 418 GV----------AVS----NEVELALEKLEREAKTAVIVAR----------------NGRVEGIIAVSDTLKESAKPAVQ 467 (645)
T ss_dssp TC----------CCC----HHHHHHHHHHHTTTCCCEEEEE----------------TTEEEEEEEEECCCTTTHHHHHH
T ss_pred CC----------Ccc----HHHHHHHHHHHhcCCeEEEEEE----------------CCEEEEEEEecCCchhHHHHHHH
Confidence 21 111 2356677889999999999984 57899999999999999999999
Q ss_pred HHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcC
Q 001960 671 ICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG 750 (991)
Q Consensus 671 ~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g 750 (991)
+|+++|++++|+|||+..+|.++|+++|+.. ++++++|++|.++++.++++
T Consensus 468 ~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~---------------------------~~~~~~P~~K~~~v~~l~~~-- 518 (645)
T 3j08_A 468 ELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIAEVLPHQKSEEVKKLQAK-- 518 (645)
T ss_dssp HHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCTTCHHHHHHHHTTT--
T ss_pred HHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE---------------------------EEEeCCHHhHHHHHHHHhhC--
Confidence 9999999999999999999999999999964 99999999999999999976
Q ss_pred CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIV 830 (991)
Q Consensus 751 ~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~ 830 (991)
+.|+|+|||.||+|||++||+||||| +|++.++++||+++.++++.++.+++++||++|+||++|+.|+++||++.+++
T Consensus 519 ~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~l 597 (645)
T 3j08_A 519 EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPA 597 (645)
T ss_dssp CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCHhHHHHHHhCCEEEEeC-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999 99999999999999999999999999999999999999999999999998877
Q ss_pred HHH
Q 001960 831 NFS 833 (991)
Q Consensus 831 ~~~ 833 (991)
++.
T Consensus 598 a~~ 600 (645)
T 3j08_A 598 AAG 600 (645)
T ss_dssp HTT
T ss_pred HHH
Confidence 653
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.2e-31 Score=288.93 Aligned_cols=260 Identities=23% Similarity=0.354 Sum_probs=199.2
Q ss_pred HHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHH
Q 001960 426 FAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSI 505 (991)
Q Consensus 426 ~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 505 (991)
.++.++.++|+++|+++++|.|+++++||||||||||+|+|.+.++. +. ++.+.++
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--~~------------------~~~l~~~---- 59 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--GD------------------SLSLAYA---- 59 (263)
Confidence 36788999999999999999999999999999999999999998764 00 0122211
Q ss_pred HhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchH
Q 001960 506 FNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASE 585 (991)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e 585 (991)
+..+ ..+.||...|+.+++...|...... ..| ...++.+....++|...
T Consensus 60 -----~~~e-------~~s~hp~a~ai~~~~~~~g~~~~~~---------~~~----------~~~~G~g~~~~~~~~~~ 108 (263)
T 2yj3_A 60 -----ASVE-------ALSSHPIAKAIVKYAKEQGVKILEV---------KDF----------KEISGIGVRGKISDKII 108 (263)
Confidence 1111 2377999999999887665432110 000 01112222222221100
Q ss_pred HHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccH
Q 001960 586 IILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGV 665 (991)
Q Consensus 586 ~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v 665 (991)
.+... .++.+ +.++ .+..+.|.+.+.|+++|++
T Consensus 109 -----------------~~G~~-------------~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~g~ 141 (263)
T 2yj3_A 109 -----------------EVKKA-------------ENNND-IAVY----------------INGEPIASFNISDVPRPNL 141 (263)
Confidence 00000 01222 2222 3446789999999999999
Q ss_pred HHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHH
Q 001960 666 KESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHL 745 (991)
Q Consensus 666 ~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l 745 (991)
+++++.|++.|+++.|+|||+..++..+++++|+.. +|+...|++|...++.+
T Consensus 142 ~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------~f~~~~p~~k~~~~~~l 194 (263)
T 2yj3_A 142 KDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE---------------------------YYSNLSPEDKVRIIEKL 194 (263)
Confidence 999999999999999999999999999999999864 67777899999999999
Q ss_pred HhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHH
Q 001960 746 RTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKF 816 (991)
Q Consensus 746 ~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~ 816 (991)
+.. ++.|+|+|||.||++|++.||+|++|| ++++.+++.||++++++++..+.++++.+|+++++|++|
T Consensus 195 ~~~-~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 195 KQN-GNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 988 888999999999999999999999999 888999999999999899999999999999999999986
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.93 E-value=7.8e-25 Score=240.78 Aligned_cols=277 Identities=29% Similarity=0.395 Sum_probs=203.6
Q ss_pred HHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHH
Q 001960 427 AMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIF 506 (991)
Q Consensus 427 ~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 506 (991)
+.+++.++|+++|+++++|+|+++++||||||||||.+.+.+.+++..+. . .++.+++. .+
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~--~--------------~~~~l~~~-~~-- 69 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG--D--------------ERELLRLA-AI-- 69 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS--C--------------HHHHHHHH-HH--
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC--C--------------HHHHHHHH-HH--
Confidence 56789999999999999999999999999999999999999988776432 0 12233321 11
Q ss_pred hcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEE--EEEcCch
Q 001960 507 NNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFR--VHCKGAS 584 (991)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~--~~~KGa~ 584 (991)
++ ..+.||.+.|+.+++...|...... +.+. ...+.+.. .+.+|.+
T Consensus 70 ------~e-------~~s~hp~~~a~~~~~~~~g~~~~~~----~~~~---------------~~~G~~~~~~~~~~g~~ 117 (287)
T 3a1c_A 70 ------AE-------RRSEHPIAEAIVKKALEHGIELGEP----EKVE---------------VIAGEGVVADGILVGNK 117 (287)
T ss_dssp ------HT-------TTCCSHHHHHHHHHHHHTTCCCCCC----SCEE---------------EETTTEEEETTEEEECH
T ss_pred ------Hh-------hcCCCHHHHHHHHHHHhcCCCcccc----ccce---------------eecCCCeEEEEEEECCH
Confidence 11 1267999999999998887642110 0011 11121111 1334655
Q ss_pred HHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCccc
Q 001960 585 EIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG 664 (991)
Q Consensus 585 e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~ 664 (991)
+.+.+.+ . +..+ .+.+..+.+..+|.+++++++ +..+++.+..+++++|+
T Consensus 118 ~~~~~~~--------~--~~~~----~~~~~~~~~~~~g~~~i~~~~----------------d~~~~~~~~~~~~~~~g 167 (287)
T 3a1c_A 118 RLMEDFG--------V--AVSN----EVELALEKLEREAKTAVIVAR----------------NGRVEGIIAVSDTLKES 167 (287)
T ss_dssp HHHHHTT--------C--CCCH----HHHHHHHHHHHTTCEEEEEEE----------------TTEEEEEEEEECCBCTT
T ss_pred HHHHhcC--------C--CccH----HHHHHHHHHHhCCCeEEEEEE----------------CCEEEEEEEeccccchh
Confidence 4432211 1 1111 234556778889999998874 35788999999999999
Q ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHH
Q 001960 665 VKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 744 (991)
Q Consensus 665 v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~ 744 (991)
++++++.|+++|+++.++||++...+..+++.+|+.. +|....|..|...++.
T Consensus 168 ~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------------------------~f~~i~~~~K~~~~~~ 220 (287)
T 3a1c_A 168 AKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIAEVLPHQKSEEVKK 220 (287)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCTTCHHHHHHH
T ss_pred HHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce---------------------------eeeecChHHHHHHHHH
Confidence 9999999999999999999999999999999999863 6777779999999998
Q ss_pred HHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHH
Q 001960 745 LRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQ 814 (991)
Q Consensus 745 l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~ 814 (991)
++.. +.++|+||+.||++|.+.|++++++| ++.+..++.||+++.++++..+.+++..+|+++++|+
T Consensus 221 l~~~--~~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 221 LQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp HTTT--CCEEEEECTTTCHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred HhcC--CeEEEEECCHHHHHHHHHCCeeEEeC-CCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 8765 67999999999999999999999998 6777677889999988889999999999999999885
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.91 E-value=3.5e-25 Score=205.34 Aligned_cols=108 Identities=27% Similarity=0.390 Sum_probs=98.8
Q ss_pred HHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccCCCCeEEec
Q 001960 229 KDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSG 308 (991)
Q Consensus 229 ~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~~~~~l~sG 308 (991)
++|.+ ..+..++|+|||++++|++++|+|||+|.|++||+|||||++++|+ +.||||+|||||.|+.|..++ .+|+|
T Consensus 4 ~~L~~-l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~-~~vdeS~LTGEs~pv~k~~g~-~v~aG 80 (113)
T 2hc8_A 4 KKLVG-LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-SYVDESMISGEPVPVLKSKGD-EVFGA 80 (113)
T ss_dssp HHHHH-HSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-EEEECHHHHCCSSCEEECTTC-EECTT
T ss_pred HHHhc-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEce-EEEEccccCCCCccEEECCCC-EEEeC
Confidence 34443 4567899999999999999999999999999999999999999997 699999999999999998765 59999
Q ss_pred cEEecCeEEEEEEEEeccchhhHHHhhhcCC
Q 001960 309 TKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 339 (991)
Q Consensus 309 t~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~ 339 (991)
|.+.+|.++++|+++|.+|.+|+|.+++.++
T Consensus 81 t~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 81 TINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp CEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred CEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999987643
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=228.75 Aligned_cols=276 Identities=27% Similarity=0.352 Sum_probs=195.5
Q ss_pred cccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecC
Q 001960 438 VRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGE 517 (991)
Q Consensus 438 vr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 517 (991)
+|+++++|+|++++.|||||+||||.|+|+|.++...+.. .+.....+ .++.
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~~----------------~~~~~~~~-~~~~----------- 52 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNHS----------------EDELLQIA-ASLE----------- 52 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSSC----------------HHHHHHHH-HHHH-----------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCCC----------------HHHHHHHH-HHhh-----------
Confidence 5889999999999999999999999999999998765331 11233222 1111
Q ss_pred CCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccC
Q 001960 518 GNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNS 597 (991)
Q Consensus 518 ~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~ 597 (991)
..+.+|...++.+++...|..... ...+..++- + ++.....+.. +..|.++.+......
T Consensus 53 ----~~s~~~~~~a~~~~~~~~g~~~~~----~~~~~~~~g----~--~~~~~~~~~~---~~~~~~~~~~~~~~~---- 111 (280)
T 3skx_A 53 ----ARSEHPIAAAIVEEAEKRGFGLTE----VEEFRAIPG----K--GVEGIVNGRR---YMVVSPGYIRELGIK---- 111 (280)
T ss_dssp ----TTCCSHHHHHHHHHHHHTTCCCCC----CEEEEEETT----T--EEEEEETTEE---EEEECHHHHHHTTCC----
T ss_pred ----ccCCCHHHHHHHHHHHhcCCCCCC----ccceeecCC----C--EEEEEECCEE---EEEecHHHHHHcCCC----
Confidence 115578999999998887764311 111111110 0 1111111111 123555554433211
Q ss_pred CCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCC
Q 001960 598 NGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGI 677 (991)
Q Consensus 598 ~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi 677 (991)
.. +....+..++.+.+.+++ +..++|.+.+.|+++|+++++++.|++.|+
T Consensus 112 ------~~--------~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~ 161 (280)
T 3skx_A 112 ------TD--------ESVEKLKQQGKTVVFILK----------------NGEVSGVIALADRIRPESREAISKLKAIGI 161 (280)
T ss_dssp ------CC--------TTHHHHHTTTCEEEEEEE----------------TTEEEEEEEEEEEECTTHHHHHHHHHHTTC
T ss_pred ------ch--------HHHHHHHhCCCeEEEEEE----------------CCEEEEEEEecCCCCHhHHHHHHHHHHCCC
Confidence 00 123445667777766653 457889999999999999999999999999
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeC
Q 001960 678 TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTG 757 (991)
Q Consensus 678 ~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iG 757 (991)
++.++||++...+..+++.+|+.. .+....|.+|...++.+.+. . .++|+|
T Consensus 162 ~~~i~T~~~~~~~~~~~~~~gl~~---------------------------~f~~~~~~~k~~~~k~~~~~-~-~~~~vG 212 (280)
T 3skx_A 162 KCMMLTGDNRFVAKWVAEELGLDD---------------------------YFAEVLPHEKAEKVKEVQQK-Y-VTAMVG 212 (280)
T ss_dssp EEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCGGGHHHHHHHHHTT-S-CEEEEE
T ss_pred EEEEEeCCCHHHHHHHHHHcCChh---------------------------HhHhcCHHHHHHHHHHHHhc-C-CEEEEe
Confidence 999999999999999999999964 77888899999999999877 4 469999
Q ss_pred CCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 758 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLT 822 (991)
Q Consensus 758 DG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~ 822 (991)
|+.||++|++.|++|++|| ++.+..++.||+++..+++.++.++++.+|+++.++++++.|++.
T Consensus 213 D~~nDi~~~~~Ag~~va~~-~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 213 DGVNDAPALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp CTTTTHHHHHHSSEEEECS-CCSSSCCCSSSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred CCchhHHHHHhCCceEEec-CCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999 888888999999999999999999999999999999999999864
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-24 Score=203.08 Aligned_cols=113 Identities=25% Similarity=0.385 Sum_probs=100.0
Q ss_pred HHHHHHHhhhhcCCcEEEEEeCCe------EEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCccee
Q 001960 224 QSLQFKDLDREKKKITVQVARNGF------RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVN 297 (991)
Q Consensus 224 ~~~~~~~l~~~~~~~~v~V~R~G~------~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~ 297 (991)
..+..++|.+ ..+..++|+|+|+ +++|++++|+|||+|.|++||+|||||+|++|++ .||||+|||||.|+.
T Consensus 5 a~~~l~~L~~-l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTGEs~pv~ 82 (124)
T 2kij_A 5 MSEALAKLIS-LQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMPVA 82 (124)
T ss_dssp -CCHHHHHHH-TCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTCCSSCEE
T ss_pred HHHHHHHHhc-cCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccCCCccEE
Confidence 3344555554 4567999999764 6889999999999999999999999999999986 999999999999999
Q ss_pred ccCCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCC
Q 001960 298 VNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 339 (991)
Q Consensus 298 k~~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~ 339 (991)
|..++ .+|+||.+.+|.+.++|+++|.+|.+|+|++++.++
T Consensus 83 k~~g~-~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 83 KKPGS-TVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp CCTTE-EECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred eCCCC-EEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 98755 699999999999999999999999999999998765
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.3e-20 Score=186.96 Aligned_cols=134 Identities=21% Similarity=0.302 Sum_probs=115.1
Q ss_pred cCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeec
Q 001960 524 LGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVP 603 (991)
Q Consensus 524 ~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~ 603 (991)
.+||+|.|+++++...+ ....+..++++..+||+|+||||+++++.+++++.+++|||||.|+++|+.+. .+|...|
T Consensus 32 ~~n~~d~Ail~~~~~~~--~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~-~~g~~~~ 108 (170)
T 3gwi_A 32 LKNLLDTAVLEGTDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVR-HNGEIVP 108 (170)
T ss_dssp CCCHHHHHHHHTSCHHH--HHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEE-ETTEEEE
T ss_pred CCChHHHHHHHHHHhcC--hhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHh-cCCCccc
Confidence 57999999999875433 23456789999999999999999999998778889999999999999999875 5888999
Q ss_pred CCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCC
Q 001960 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660 (991)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~ 660 (991)
++++.++.+.+.+++|+++|+|||++|||.++..........|+||+|+|++||-|.
T Consensus 109 l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 109 LDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC-
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhccccc
Confidence 999999999999999999999999999999976532222346899999999999885
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.73 E-value=8.6e-19 Score=193.47 Aligned_cols=145 Identities=14% Similarity=0.154 Sum_probs=116.5
Q ss_pred ccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc--cccceEeccC
Q 001960 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI--PKIQVMARSS 734 (991)
Q Consensus 657 i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~--~~~~v~ar~s 734 (991)
..+++||+++++++.|+++|++++|+|||...++.++++++|+..++..++.... ..+++.+...+ +.+.++++..
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l--~~~~~~~~~~~~~~~i~~~~k~~ 215 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFM--DFDENGVLKGFKGELIHVFNKHD 215 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECE--EECTTSBEEEECSSCCCTTCHHH
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeE--EEcccceeEeccccccchhhccc
Confidence 3689999999999999999999999999999999999999999765433332111 01111111111 2234678888
Q ss_pred hhhHHHHHHHHHhhcCCEEEEeCCCCCChHh---hhhCCeeEEecC------CCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPA---LHEADIGLAMGI------AGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 735 P~~K~~~v~~l~~~~g~~v~~iGDG~ND~~a---l~~Advgiamg~------~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
|.+|...+..+++. ++.|+|+|||+||+|| |+.||+|||||. ++++.+++++|+||++|++..++.+|.
T Consensus 216 ~~~k~~~~~~~~~~-~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~il 293 (297)
T 4fe3_A 216 GALKNTDYFSQLKD-NSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSIL 293 (297)
T ss_dssp HHHTCHHHHHHTTT-CCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHHH
T ss_pred HHHHHHHHHHhhcc-CCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHHH
Confidence 99999999999988 8999999999999999 459999999995 567778999999999999999998764
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.44 E-value=7.5e-14 Score=143.04 Aligned_cols=139 Identities=17% Similarity=0.212 Sum_probs=114.9
Q ss_pred EEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceE
Q 001960 651 CIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVM 730 (991)
Q Consensus 651 ~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 730 (991)
.++.+.++|.. +++.|+++|+++.++||++...+..+++++|+.. ++
T Consensus 43 ~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------~f 89 (189)
T 3mn1_A 43 EIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------LF 89 (189)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE---------------------------EE
T ss_pred EeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH---------------------------Hh
Confidence 44555555443 9999999999999999999999999999999964 34
Q ss_pred eccChhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCC----chHHHHHH
Q 001960 731 ARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN----FSTIVTVA 803 (991)
Q Consensus 731 ar~sP~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~----~~~i~~~i 803 (991)
... .+|...++.+.+++| +.++|+||+.||++|++.|+++++|+ ++.+.+++.||+++.+++ +..+.+.+
T Consensus 90 ~~~--~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l 166 (189)
T 3mn1_A 90 QGR--EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQGGEGAAREFCELI 166 (189)
T ss_dssp CSC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCTTTTHHHHHHHHH
T ss_pred cCc--CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHH
Confidence 333 678788888776645 57999999999999999999999999 789999999999998764 56677888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 001960 804 KWGRSVYINIQKFVQFQLTVNV 825 (991)
Q Consensus 804 ~~gR~~~~~i~k~i~~~l~~n~ 825 (991)
..+|..+.+|++++.|.+.+|-
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~ 188 (189)
T 3mn1_A 167 LSAQGNLEAAHSVYLEGHHHHH 188 (189)
T ss_dssp HHHTTCHHHHHHTTSTTC----
T ss_pred HHccCcHHHHHHHHhccccccC
Confidence 8899999999999999998873
|
| >4aqr_D Calcium-transporting ATPase 8, plasma membrane-TY; Ca-binding protein-hydrolase complex, plasma-membrane calciu; 1.95A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-13 Score=104.82 Aligned_cols=56 Identities=41% Similarity=0.615 Sum_probs=50.9
Q ss_pred CcHHHHHHHHHhhcccccccccchhhhccchhhhHHHHHhhhhhhhHHHHhhhhhhhhhhc
Q 001960 17 TSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIH 77 (991)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~r~f~~~~~l~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~ 77 (991)
+|.|+++|||+|+ +|+||+|||||++||+|++|++..++ ++|++..+.+|+.+|.+
T Consensus 1 ~s~e~L~rWR~a~-lVlNa~RRFR~t~dL~K~~e~~~~~r----kiR~~~~v~rAa~~F~~ 56 (57)
T 4aqr_D 1 SSIERLQQWRKAA-LVLNASRRFRYTLDLKKEQETREMRQ----KIRSHAHALLAANRFMD 56 (57)
T ss_dssp CHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH-HHhchHhhhhhhcchhhHHHHHHHHH----HHHHHHHHHHHHHHhhc
Confidence 4789999999998 99999999999999999998776664 89999999999999974
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.27 E-value=3.4e-12 Score=143.00 Aligned_cols=151 Identities=16% Similarity=0.159 Sum_probs=111.2
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCcee--eeCcccccCCHHHHhhhccccceE-eccCh
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA--IEGPEFREKSDEELSKLIPKIQVM-ARSSP 735 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~v--i~g~~~~~~~~~~~~~~~~~~~v~-ar~sP 735 (991)
-+++|++.+.++.|+++|+++.++||+....+..+++.+|+...-... +....+. . .+. --..+
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~t-----------g--~~~~~~~~~ 243 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLT-----------G--QVLGEVVSA 243 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEE-----------E--EEESCCCCH
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeee-----------e--eecccccCh
Confidence 378999999999999999999999999999999999999985311100 0000000 0 000 00123
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYIN 812 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~ 812 (991)
..|...++.+.+++| +.++|+|||.||++|++.|++|++| ++.+..++.||+++..+++.++..++........+
T Consensus 244 kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r 321 (335)
T 3n28_A 244 QTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQK 321 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTC
T ss_pred hhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhh
Confidence 456666665555434 6799999999999999999999999 78899999999999999999999999988888889
Q ss_pred HHHHHHHHHHHH
Q 001960 813 IQKFVQFQLTVN 824 (991)
Q Consensus 813 i~k~i~~~l~~n 824 (991)
+++++.|.+.||
T Consensus 322 ~~~~~~~~~~~~ 333 (335)
T 3n28_A 322 LSWKSKEGHHHH 333 (335)
T ss_dssp CCCC--------
T ss_pred hccccccccccc
Confidence 999999999987
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=2.1e-11 Score=123.58 Aligned_cols=133 Identities=17% Similarity=0.173 Sum_probs=107.4
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHH
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~ 740 (991)
+.++..++|+.|+++|+++.++||++...+..+++++|+.. ++.. ...|..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~---------------------------~~~~--~k~k~~ 86 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL---------------------------FFLG--KLEKET 86 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------EEES--CSCHHH
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------eecC--CCCcHH
Confidence 44567899999999999999999999999999999999863 2322 245777
Q ss_pred HHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHH-HH---HHHHHHHHHHH
Q 001960 741 LVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV-TV---AKWGRSVYINI 813 (991)
Q Consensus 741 ~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~-~~---i~~gR~~~~~i 813 (991)
.++.+.+++| +.++|+||+.||++|++.|+++++|+ ++.+.+++.||+++.+++..++. .+ +...|..+.++
T Consensus 87 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~~ 165 (180)
T 1k1e_A 87 ACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSVF 165 (180)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhhh
Confidence 7776655545 67999999999999999999999998 88899999999999887766665 33 34466668888
Q ss_pred HHHHHHHHHH
Q 001960 814 QKFVQFQLTV 823 (991)
Q Consensus 814 ~k~i~~~l~~ 823 (991)
+.++.|....
T Consensus 166 ~~~~~~~~~~ 175 (180)
T 1k1e_A 166 DTAQGFLKSV 175 (180)
T ss_dssp HCHHHHHHHG
T ss_pred hhccchhhhh
Confidence 8877776643
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.19 E-value=1.1e-10 Score=123.16 Aligned_cols=147 Identities=20% Similarity=0.186 Sum_probs=109.1
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eee--eCccc-ccC--------------
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAI--EGPEF-REK-------------- 715 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~----~~-~vi--~g~~~-~~~-------------- 715 (991)
..++.+++.++|++|+++|++++++||++...+..+++++|+..+ ++ .+. +|+.+ ...
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 456788999999999999999999999999999999999998532 11 122 23322 000
Q ss_pred -----------------------CHHHHhhhcc--ccceE-----eccCh--hhHHHHHHHHHhhcC---CEEEEeCCCC
Q 001960 716 -----------------------SDEELSKLIP--KIQVM-----ARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGT 760 (991)
Q Consensus 716 -----------------------~~~~~~~~~~--~~~v~-----ar~sP--~~K~~~v~~l~~~~g---~~v~~iGDG~ 760 (991)
.++++.++.. .+.+. ....| .+|...++.+.+++| +.++++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 1112211111 12221 12224 789999999887755 4689999999
Q ss_pred CChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 761 NDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 761 ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
||.+|++.|++|++|| ++.+..++.||+++.+++-.++.+++++
T Consensus 180 nD~~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~~ 223 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 223 (227)
T ss_dssp GGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred HhHHHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHHH
Confidence 9999999999999999 8889999999999999888999888753
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.16 E-value=6.3e-11 Score=118.33 Aligned_cols=116 Identities=18% Similarity=0.209 Sum_probs=94.7
Q ss_pred CCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH--HcCCccCCceeeeCcccccCCHHHHhhh
Q 001960 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR--ECGILTDNGIAIEGPEFREKSDEELSKL 723 (991)
Q Consensus 646 e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~--~~gi~~~~~~vi~g~~~~~~~~~~~~~~ 723 (991)
..+...++.+.++|. .+|+.|+++|+++.++||+ ..+..+++ .+|+.
T Consensus 28 ~~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~----------------------- 76 (168)
T 3ewi_A 28 SGDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK----------------------- 76 (168)
T ss_dssp CSSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-----------------------
T ss_pred cCCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-----------------------
Confidence 344567788888887 3899999999999999999 67888888 55652
Q ss_pred ccccceEeccChhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHH
Q 001960 724 IPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV 800 (991)
Q Consensus 724 ~~~~~v~ar~sP~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~ 800 (991)
++. .+.+|...++.+.+++| +.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++-.+++
T Consensus 77 -----~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~~~~~~~G~~ 148 (168)
T 3ewi_A 77 -----TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DACSGAQKAVGYICKCSGGRGAI 148 (168)
T ss_dssp -----EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCCHHHHTTCSEECSSCTTTTHH
T ss_pred -----EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEeCCCCCccHH
Confidence 221 23578888888877755 57999999999999999999999999 89999999999999877666533
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.13 E-value=4.3e-11 Score=122.83 Aligned_cols=103 Identities=17% Similarity=0.218 Sum_probs=87.7
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHH
Q 001960 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (991)
Q Consensus 667 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~ 746 (991)
.+|+.|+++|+++.++||++...+..+++++|+.. ++... ..|...++.+.
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~---------------------------~~~~~--k~k~~~~~~~~ 109 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL---------------------------IYQGQ--DDKVQAYYDIC 109 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE---------------------------EECSC--SSHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE---------------------------EeeCC--CCcHHHHHHHH
Confidence 35999999999999999999999999999999963 34333 46777777776
Q ss_pred hhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHH
Q 001960 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTI 799 (991)
Q Consensus 747 ~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i 799 (991)
+++| +.++++||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++-.++
T Consensus 110 ~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G~ 164 (195)
T 3n07_A 110 QKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHGA 164 (195)
T ss_dssp HHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTTH
T ss_pred HHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCCH
Confidence 6544 57999999999999999999999999 8899999999999988765553
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.6e-10 Score=116.67 Aligned_cols=104 Identities=20% Similarity=0.240 Sum_probs=89.2
Q ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHh
Q 001960 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (991)
Q Consensus 668 ~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~ 747 (991)
+++.|+++|+++.++||+....+..+++.+|+. +++.. ..|...++.+.+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~----------------------------~~~~~--~~k~~~l~~~~~ 96 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP----------------------------VLHGI--DRKDLALKQWCE 96 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC----------------------------EEESC--SCHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe----------------------------eEeCC--CChHHHHHHHHH
Confidence 899999999999999999999999999999985 22222 567888887776
Q ss_pred hcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHH
Q 001960 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 802 (991)
Q Consensus 748 ~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~ 802 (991)
++| +.++++||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++..++...
T Consensus 97 ~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~~ 153 (176)
T 3mmz_A 97 EQGIAPERVLYVGNDVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIRE 153 (176)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHH
T ss_pred HcCCCHHHEEEEcCCHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHHH
Confidence 645 57999999999999999999999999 7889999999999998886665543
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.4e-10 Score=118.72 Aligned_cols=123 Identities=16% Similarity=0.109 Sum_probs=96.0
Q ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEecc--ChhhHHHHHHHH
Q 001960 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS--SPMDKHTLVKHL 745 (991)
Q Consensus 668 ~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~--sP~~K~~~v~~l 745 (991)
+++.|+++|+++.++||++...+..+++.+|+.. ++... .|+-...+++.+
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~---------------------------~~~~~kpk~~~~~~~~~~~ 106 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH---------------------------YYKGQVDKRSAYQHLKKTL 106 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE---------------------------EECSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc---------------------------ceeCCCChHHHHHHHHHHh
Confidence 4999999999999999999999999999999964 33333 334444444444
Q ss_pred HhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchH----HHHHHHHHHHHHHHHHHHHHH
Q 001960 746 RTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST----IVTVAKWGRSVYINIQKFVQF 819 (991)
Q Consensus 746 ~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~----i~~~i~~gR~~~~~i~k~i~~ 819 (991)
.-. .+.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++..+ +.+.+...|..|.++.+.+.+
T Consensus 107 ~~~-~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~ 182 (191)
T 3n1u_A 107 GLN-DDEFAYIGDDLPDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLK 182 (191)
T ss_dssp TCC-GGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CCC-HHHEEEECCCHHHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHh
Confidence 333 357999999999999999999999999 888999999999999887444 555566677777776665544
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.06 E-value=3.3e-10 Score=117.70 Aligned_cols=101 Identities=21% Similarity=0.219 Sum_probs=87.7
Q ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHh
Q 001960 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (991)
Q Consensus 668 ~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~ 747 (991)
+++.|+++|+++.++||++...+..+++++|+.. ++... .+|...++.+.+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~---------------------------~f~~~--k~K~~~l~~~~~ 134 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH---------------------------LYQGQ--SDKLVAYHELLA 134 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE---------------------------EECSC--SSHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch---------------------------hhccc--CChHHHHHHHHH
Confidence 8999999999999999999999999999999963 44444 578888888776
Q ss_pred hcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchH
Q 001960 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST 798 (991)
Q Consensus 748 ~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~ 798 (991)
++| +.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++-.+
T Consensus 135 ~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~v~~~~~~~G 187 (211)
T 3ij5_A 135 TLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA-DAHPLLLPKAHYVTRIKGGRG 187 (211)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTT
T ss_pred HcCcCcceEEEEcCCHHHHHHHHHCCCEEEeC-CccHHHHhhCCEEEeCCCCCc
Confidence 644 67999999999999999999999999 788889999999998775443
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=4.5e-10 Score=111.71 Aligned_cols=101 Identities=21% Similarity=0.260 Sum_probs=85.8
Q ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHh
Q 001960 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (991)
Q Consensus 668 ~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~ 747 (991)
+++.|+++|+++.++||++...+..+++.+|+.. ++... ..|...++.+.+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------~~~~~--kpk~~~~~~~~~ 89 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------LFQGV--VDKLSAAEELCN 89 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE---------------------------EECSC--SCHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE---------------------------eeccc--CChHHHHHHHHH
Confidence 8999999999999999999999999999999964 33333 456666666655
Q ss_pred hcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchH
Q 001960 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST 798 (991)
Q Consensus 748 ~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~ 798 (991)
++| +.++|+||+.||.+|++.|+++++++ ++.+..++.||+++.+++..+
T Consensus 90 ~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g 142 (164)
T 3e8m_A 90 ELGINLEQVAYIGDDLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEG 142 (164)
T ss_dssp HHTCCGGGEEEECCSGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTT
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCc
Confidence 534 57999999999999999999999998 889999999999999988555
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.00 E-value=1.7e-09 Score=117.49 Aligned_cols=69 Identities=32% Similarity=0.453 Sum_probs=61.5
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
..|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+.+|+.||+++.+++-.++.++|++
T Consensus 196 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 196 IDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 478888888877756 46999999999999999999999999 8999999999999998889999988754
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.94 E-value=4e-09 Score=115.11 Aligned_cols=69 Identities=23% Similarity=0.331 Sum_probs=61.8
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
..|...++.+.+++| +.|+++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-.++.++|++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMG-NAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEec-CCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 568888888887756 46899999999999999999999999 9999999999999999888999988764
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.94 E-value=1.6e-09 Score=117.69 Aligned_cols=68 Identities=26% Similarity=0.397 Sum_probs=50.7
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
.+|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+|+.+++-.+|.++|+
T Consensus 196 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 196 ASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC------CHHHHHC
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeecc-CCCHHHHHhcceeccCCCccHHHHHHH
Confidence 459999998887766 56999999999999999999999999 899999999999999888888888764
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.88 E-value=2.6e-09 Score=110.73 Aligned_cols=136 Identities=18% Similarity=0.136 Sum_probs=99.2
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEe-ccChhh
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMA-RSSPMD 737 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a-r~sP~~ 737 (991)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++...+- .+ ...+.. -..+..
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~----------~~-~~~~~~~~~~~k~ 142 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEND----------AL-NGLVTGHMMFSHS 142 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT----------EE-EEEEEESCCSTTH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCC----------EE-EeeeccCCCCCCC
Confidence 468899999999999999999999999999999999999986421111111000 00 000000 112456
Q ss_pred HHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHH
Q 001960 738 KHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGR 807 (991)
Q Consensus 738 K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR 807 (991)
|...++.+.+++| +.++++||+.||.+|++.|+++++| ++.+..++.||+++.++++..+..+++|-+
T Consensus 143 k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~~~~~ 213 (217)
T 3m1y_A 143 KGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLIEGHH 213 (217)
T ss_dssp HHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC-----
T ss_pred hHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHhcccc
Confidence 7777777666545 5689999999999999999999999 677888999999999999999998877643
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.88 E-value=6.6e-09 Score=111.40 Aligned_cols=68 Identities=29% Similarity=0.283 Sum_probs=59.4
Q ss_pred hHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 737 ~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
+|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+|+.+++-.++.+++++
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~dGva~~i~~ 253 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPVDKEGIWYGLKQ 253 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCCCcchHHHHHHH
Confidence 57777788777655 46899999999999999999999999 8999999999999998888999988753
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.88 E-value=7.2e-09 Score=113.01 Aligned_cols=69 Identities=22% Similarity=0.229 Sum_probs=60.2
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCE--EeccCCchHHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV--IILDDNFSTIVTVAKW 805 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~--vl~~~~~~~i~~~i~~ 805 (991)
..|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+ ++.+++-++|.++|+.
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~~~v~~sn~edGva~~i~~ 281 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-NAHQRLKDLHPELEVIGSNADDAVPRYLRK 281 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCTTSEECCCGGGTHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-CCCHHHHHhCCCCEecccCCcchHHHHHHH
Confidence 568899998887766 46999999999999999999999999 999999999984 6778888899887753
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.87 E-value=5e-09 Score=120.75 Aligned_cols=135 Identities=20% Similarity=0.277 Sum_probs=108.2
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeeeCcccccCCHHHHhhhccccceEec-----
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVMAR----- 732 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~--~vi~g~~~~~~~~~~~~~~~~~~~v~ar----- 732 (991)
+++||+.+.++.|++.|+++.++||.....+..+++.+|+...-. ..+.+. .+.++
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg-----------------~~tg~~~~~v 318 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDG-----------------TLTGRVVGPI 318 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETT-----------------EEEEEECSSC
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCC-----------------EEEeeEccCC
Confidence 789999999999999999999999999999999999999953100 000000 01111
Q ss_pred cChhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHH
Q 001960 733 SSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSV 809 (991)
Q Consensus 733 ~sP~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~ 809 (991)
..+..|..+++.+.+++| +.++++|||.||.+|++.|++|+++ ++.+..++.||+++..+++.++..++.++|.-
T Consensus 319 ~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~ 396 (415)
T 3p96_A 319 IDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLGVTRGE 396 (415)
T ss_dssp CCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHH
T ss_pred CCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHH
Confidence 226778888888776645 5699999999999999999999999 57788899999999999999999999887776
Q ss_pred HHHH
Q 001960 810 YINI 813 (991)
Q Consensus 810 ~~~i 813 (991)
+...
T Consensus 397 ~~~~ 400 (415)
T 3p96_A 397 IEAA 400 (415)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5543
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.84 E-value=8e-09 Score=112.52 Aligned_cols=69 Identities=22% Similarity=0.195 Sum_probs=62.1
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
.+|...++.+.+++| +.|+++||+.||.+|++.|++|+||| ++.+..|+.||+|+.+++-.++.++|++
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~s~~edGv~~~l~~ 281 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVS-NARQEVIAAAKHTCAPYWENGVLSVLKS 281 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHHSSEEECCGGGTHHHHHHHH
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcC-CCCHHHHHhcCeECCCCCCChHHHHHHH
Confidence 469999999888766 56999999999999999999999999 9999999999999999889999988753
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.83 E-value=6.6e-09 Score=111.98 Aligned_cols=69 Identities=29% Similarity=0.358 Sum_probs=62.4
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
..|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+.+|++||+++.+++-.++.+++++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 578889988888766 46999999999999999999999999 9999999999999999999999988754
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.81 E-value=1.1e-08 Score=110.57 Aligned_cols=69 Identities=28% Similarity=0.307 Sum_probs=61.4
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
..|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-.++.+++++
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 468888888877655 56999999999999999999999999 8999999999999999889999988754
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=1.1e-08 Score=105.24 Aligned_cols=129 Identities=19% Similarity=0.272 Sum_probs=91.7
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEec-cChhhH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-SSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar-~sP~~K 738 (991)
++.|+++++++.|++.|+++.++||+....+..+.+.+|+... .-.+-.... ..+. ..+... ..+..|
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-------~~~~-~~~~~~~~~~~~K 144 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA---FANRLIVKD-------GKLT-GDVEGEVLKENAK 144 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEE---EEEEEEEET-------TEEE-EEEECSSCSTTHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeE---EEeeeEEEC-------CEEc-CCcccCccCCccH
Confidence 5678999999999999999999999999888888888887421 000000000 0000 001001 224578
Q ss_pred HHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHH
Q 001960 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVT 801 (991)
Q Consensus 739 ~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~ 801 (991)
...++.+.+++| +.++++||+.||.+|++.|+++++|+ +.+..+..||+++.++++..+..
T Consensus 145 ~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 145 GEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGG
T ss_pred HHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHH
Confidence 777777665545 46999999999999999999999997 45666888999998777777654
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=1.2e-08 Score=103.94 Aligned_cols=108 Identities=19% Similarity=0.221 Sum_probs=87.6
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHH
Q 001960 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (991)
Q Consensus 667 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~ 746 (991)
.+++.|+++|+++.++||++...+..+++.+|+.. ++... ..|...++.+.
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~---------------------------~~~~~--kpk~~~~~~~~ 110 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH---------------------------LYQGQ--SNKLIAFSDLL 110 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE---------------------------EECSC--SCSHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce---------------------------eecCC--CCCHHHHHHHH
Confidence 48999999999999999999999999999999863 33322 34566666665
Q ss_pred hhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHH-HHHH
Q 001960 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV-TVAK 804 (991)
Q Consensus 747 ~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~-~~i~ 804 (991)
+++| +.++|+||+.||.+|++.|+++++++ ++.+.+++.||+++.+.+-.+++ ++++
T Consensus 111 ~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 111 EKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec-CcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 5545 57999999999999999999999998 77777888999999887666665 5543
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.75 E-value=3.7e-08 Score=103.78 Aligned_cols=146 Identities=20% Similarity=0.226 Sum_probs=103.6
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeee-Ccccc-------------------
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIE-GPEFR------------------- 713 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~----~~-~vi~-g~~~~------------------- 713 (991)
..+.+.+.+++++++++|++++++||+....+..+.+.+|+..+ ++ .+.. |+.+.
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 35678899999999999999999999999999999999987531 11 1111 11100
Q ss_pred --------------------cCCHHHHhhhcc----ccceE-----eccC--hhhHHHHHHHHHhhcC---CEEEEeCCC
Q 001960 714 --------------------EKSDEELSKLIP----KIQVM-----ARSS--PMDKHTLVKHLRTTLG---EVVAVTGDG 759 (991)
Q Consensus 714 --------------------~~~~~~~~~~~~----~~~v~-----ar~s--P~~K~~~v~~l~~~~g---~~v~~iGDG 759 (991)
....+.+++++. ...+. .... ...|...++.+.+++| +.++++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred CceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 001222222211 12222 1111 2478888888876645 468999999
Q ss_pred CCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 760 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 760 ~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
.||.+|++.|+++++|+ ++.+..++.||+++.+.+-.++.+++++
T Consensus 179 ~nD~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~~ 223 (231)
T 1wr8_A 179 ENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYH 223 (231)
T ss_dssp GGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHHH
Confidence 99999999999999999 7888888999999988777788877753
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.75 E-value=1e-08 Score=113.38 Aligned_cols=130 Identities=17% Similarity=0.284 Sum_probs=97.9
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceee--eCcccccCCHHHHhhhccccceEe-ccChh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAI--EGPEFREKSDEELSKLIPKIQVMA-RSSPM 736 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi--~g~~~~~~~~~~~~~~~~~~~v~a-r~sP~ 736 (991)
+++||+.+.++.|+++|+++.++||.....+..+.+.+|+...-..++ .+..+.. .+.. -..+.
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg-------------~i~~~~~~~k 245 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTD-------------NITLPIMNAA 245 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEE-------------EECSSCCCHH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeee-------------eEecccCCCC
Confidence 488999999999999999999999999999999999999863111111 0100000 0000 11346
Q ss_pred hHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 737 ~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
.|..+++.+.+++| +.++|+||+.||.+|++.|++|++++ +.+..++.||.++..+++..+..+++
T Consensus 246 pkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~--~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 246 NKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWK--AKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEES--CCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEeC--CCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 77777777655545 57999999999999999999999994 67778889999999889998887653
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.6e-08 Score=111.42 Aligned_cols=70 Identities=21% Similarity=0.231 Sum_probs=62.4
Q ss_pred hhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 735 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 735 P~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
+..|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-.++.++|++
T Consensus 226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 298 (304)
T 3l7y_A 226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVIDN 298 (304)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHHH
Confidence 3679989998887766 56999999999999999999999999 9999999999999998888899988763
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.70 E-value=1.4e-08 Score=113.42 Aligned_cols=143 Identities=16% Similarity=0.243 Sum_probs=99.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeC-ccccc--CC-----------H--------
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEG-PEFRE--KS-----------D-------- 717 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g-~~~~~--~~-----------~-------- 717 (991)
++++++.+.++.|++ |+.+.++||++...+..+.+.+++.. .+... ..... .. +
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 178 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRG---ELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGE 178 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCS---EEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhh---hhcccccchhhhccccccceeEEecCHHHHhhhhH
Confidence 568999999999999 99999999999777777777777732 11110 00000 00 0
Q ss_pred HHHhhhcccc------ceE----eccChhhHHHHHHHHHhhcC--CEEEEeCCCCCChHhhhhC----CeeEEecCCCcH
Q 001960 718 EELSKLIPKI------QVM----ARSSPMDKHTLVKHLRTTLG--EVVAVTGDGTNDAPALHEA----DIGLAMGIAGTE 781 (991)
Q Consensus 718 ~~~~~~~~~~------~v~----ar~sP~~K~~~v~~l~~~~g--~~v~~iGDG~ND~~al~~A----dvgiamg~~g~~ 781 (991)
+++ +.+.++ ..+ --..+.+|...++.+... . +.|+++|||.||++|++.| ++|||| ++.+
T Consensus 179 ~~l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~-~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~ 254 (332)
T 1y8a_A 179 ELF-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCES-KGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNE 254 (332)
T ss_dssp HHH-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHH-HTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCH
T ss_pred HHH-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChh-hcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCH
Confidence 111 111110 001 112356798888877654 2 4589999999999999999 999999 6889
Q ss_pred HHHhhcCEEeccCCchHHHHHHH----HHHHHH
Q 001960 782 VAKESADVIILDDNFSTIVTVAK----WGRSVY 810 (991)
Q Consensus 782 ~ak~~ad~vl~~~~~~~i~~~i~----~gR~~~ 810 (991)
.+|+.||+++.+++..++.++++ .||..+
T Consensus 255 ~lk~~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~ 287 (332)
T 1y8a_A 255 YALKHADVVIISPTAMSEAKVIELFMERKERAF 287 (332)
T ss_dssp HHHTTCSEEEECSSTHHHHHHHHHHHHHGGGGG
T ss_pred HHHhhCcEEecCCCCCHHHHHHHHHHHcCCchh
Confidence 99999999999989988877654 455444
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.69 E-value=4.3e-08 Score=97.04 Aligned_cols=115 Identities=16% Similarity=0.222 Sum_probs=89.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
...+++.++++.|+++|+++.++||.+...+..+.+.+|+.. .+... ..|.
T Consensus 36 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------------------------~~~~~--kp~~ 86 (162)
T 2p9j_A 36 VFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE---------------------------IYTGS--YKKL 86 (162)
T ss_dssp EEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------------------------EEECC----CH
T ss_pred eecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------------------------hccCC--CCCH
Confidence 346778999999999999999999999999999999999853 22222 2344
Q ss_pred HHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHH-HHHH
Q 001960 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV-TVAK 804 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~-~~i~ 804 (991)
..++.+.+++| +.++++||+.||.+|.+.|+++++++ ++.+..++.||+++.+.+-.+++ ++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~~~~~~ 154 (162)
T 2p9j_A 87 EIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGALREVAE 154 (162)
T ss_dssp HHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHHHHHHH
Confidence 44443333323 56899999999999999999999998 77888888999999887776766 3443
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.63 E-value=6.5e-08 Score=105.27 Aligned_cols=68 Identities=26% Similarity=0.343 Sum_probs=59.7
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
..|...++.+.+++| +.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++..++.++++
T Consensus 197 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 197 VNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEec-CCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 478888888877655 46899999999999999999999999 888888999999998888888888775
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.62 E-value=6e-08 Score=101.85 Aligned_cols=130 Identities=25% Similarity=0.333 Sum_probs=94.0
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.++.+++.. .....|+--
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~kp~~~~~ 166 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVE----------------RGKPHPDMA 166 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSS----------------SCTTSSHHH
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCC----------------CCCCCHHHH
Confidence 3567899999999999999999999999999999999999865433444443211 111222333
Q ss_pred HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCe---eEEecCCCcHHHHh-hcCEEeccCCchHHHHHHHHHH
Q 001960 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI---GLAMGIAGTEVAKE-SADVIILDDNFSTIVTVAKWGR 807 (991)
Q Consensus 739 ~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Adv---giamg~~g~~~ak~-~ad~vl~~~~~~~i~~~i~~gR 807 (991)
..+.+.+.-. .+.++++||+.||+.|++.|++ +++||.+..+..++ .||+++.+ +..+.++++.|+
T Consensus 167 ~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~--~~el~~~l~~~~ 236 (237)
T 4ex6_A 167 LHVARGLGIP-PERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDS--FPAAVTAVLDGH 236 (237)
T ss_dssp HHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESS--HHHHHHHHHHC-
T ss_pred HHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECC--HHHHHHHHHccC
Confidence 3333333322 3569999999999999999999 99998444344444 79999955 899988887654
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.62 E-value=2e-08 Score=102.25 Aligned_cols=118 Identities=27% Similarity=0.394 Sum_probs=90.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceee-eCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAI-EGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi-~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
+++|++.+.++.|++.|+++.++|++....+..+ +.+|+......+. ....+ .-....|..|
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~k 141 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKF----------------QGIRLRFRDK 141 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEE----------------EEEECCSSCH
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCce----------------ECCcCCccCH
Confidence 7899999999999999999999999998888888 8888753200111 11000 0134556789
Q ss_pred HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 739 ~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
...++.+ . .+.++++||+.||.+|++.|+++++|+ ++.+ .||+++.+ +..+.++++
T Consensus 142 ~~~l~~l--~-~~~~i~iGD~~~Di~~~~~ag~~v~~~-~~~~----~ad~v~~~--~~el~~~l~ 197 (201)
T 4ap9_A 142 GEFLKRF--R-DGFILAMGDGYADAKMFERADMGIAVG-REIP----GADLLVKD--LKELVDFIK 197 (201)
T ss_dssp HHHHGGG--T-TSCEEEEECTTCCHHHHHHCSEEEEES-SCCT----TCSEEESS--HHHHHHHHH
T ss_pred HHHHHhc--C-cCcEEEEeCCHHHHHHHHhCCceEEEC-CCCc----cccEEEcc--HHHHHHHHH
Confidence 9988888 3 567889999999999999999999999 6665 79999865 777776654
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.54 E-value=1.2e-07 Score=102.53 Aligned_cols=69 Identities=28% Similarity=0.296 Sum_probs=60.2
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
..|...++.+.+++| +.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++-.++.+++++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~~ 261 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQA 261 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHHH
Confidence 478888888877655 46899999999999999999999999 8888889999999988888889887753
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=7.2e-08 Score=99.06 Aligned_cols=124 Identities=15% Similarity=0.058 Sum_probs=92.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeeeCcccccCCHHHHhhhccccceEeccChhh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~--~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 737 (991)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..++.++. ... ..
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-------------------~~~--kp 128 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-------------------APP--KP 128 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-------------------SCC--TT
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-------------------CCC--CC
Confidence 45689999999999999999999999999999999999985421 22222211 011 11
Q ss_pred HHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCe-eEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHH
Q 001960 738 KHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI-GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGR 807 (991)
Q Consensus 738 K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Adv-giamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR 807 (991)
|...++.+.+++| +.++++||+.||..|.+.|++ +|+|+ ++.+..++.||+++.+ +..+...++..|
T Consensus 129 ~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~~ad~v~~~--~~el~~~~~~~~ 199 (205)
T 3m9l_A 129 HPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVN-LPDNPWPELTDWHARD--CAQLRDLLSAEG 199 (205)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECS-SSSCSCGGGCSEECSS--HHHHHHHHHHTT
T ss_pred CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEe-CCCCcccccCCEEeCC--HHHHHHHHHhcc
Confidence 2333444433334 569999999999999999999 99999 7776678889999955 888888775433
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.49 E-value=1.2e-07 Score=100.61 Aligned_cols=138 Identities=14% Similarity=0.183 Sum_probs=93.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCccCCc-eee-eCccc------c--cCC------------
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC-GILTDNG-IAI-EGPEF------R--EKS------------ 716 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~-gi~~~~~-~vi-~g~~~------~--~~~------------ 716 (991)
.+.+.+.++|++|+++| +++++||+....+..+.+++ ++...++ .+. +|+.. . .++
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~ 101 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLDINMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWVS 101 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSSCEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccchheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHHHHh
Confidence 46788999999999999 99999999999998887664 1111122 111 22220 0 000
Q ss_pred -------------------------HH---HHhhhc---cccceE-----eccCh--hhHHHHHHHHHhhcCCEEEEeCC
Q 001960 717 -------------------------DE---ELSKLI---PKIQVM-----ARSSP--MDKHTLVKHLRTTLGEVVAVTGD 758 (991)
Q Consensus 717 -------------------------~~---~~~~~~---~~~~v~-----ar~sP--~~K~~~v~~l~~~~g~~v~~iGD 758 (991)
++ ++.+.+ +.+.+. ....| .+|...++.|.+++| |+++||
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g--via~GD 179 (239)
T 1u02_A 102 DFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGERP--AIIAGD 179 (239)
T ss_dssp HSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC--EEEEES
T ss_pred hCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC--eEEEeC
Confidence 01 011101 111111 11223 479999999988877 889999
Q ss_pred CCCChHhhhhC--CeeEEecCCCcHHHHhhcCEEecc-CCchHHHHHHHH
Q 001960 759 GTNDAPALHEA--DIGLAMGIAGTEVAKESADVIILD-DNFSTIVTVAKW 805 (991)
Q Consensus 759 G~ND~~al~~A--dvgiamg~~g~~~ak~~ad~vl~~-~~~~~i~~~i~~ 805 (991)
+.||.+||+.| ++||||| ++ ++.||+++.+ ++-.++.++|++
T Consensus 180 ~~ND~~Ml~~a~~g~~vam~-Na----~~~A~~v~~~~~~~~gV~~~l~~ 224 (239)
T 1u02_A 180 DATDEAAFEANDDALTIKVG-EG----ETHAKFHVADYIEMRKILKFIEM 224 (239)
T ss_dssp SHHHHHHHHTTTTSEEEEES-SS----CCCCSEEESSHHHHHHHHHHHHH
T ss_pred CCccHHHHHHhhCCcEEEEC-CC----CCcceEEeCCCCCHHHHHHHHHH
Confidence 99999999999 9999999 66 6789999977 667777777643
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=3.4e-07 Score=97.33 Aligned_cols=69 Identities=14% Similarity=0.127 Sum_probs=59.1
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhh-------cCEEeccCCchHHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES-------ADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~-------ad~vl~~~~~~~i~~~i~~ 805 (991)
..|...++.+.+++| +.++++||+.||.+|++.|++|++|| ++.+..++. ||+++.+++-.++.+++++
T Consensus 161 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~ 239 (244)
T 1s2o_A 161 SNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHHH
Confidence 478888888887755 46899999999999999999999999 888888885 8899988888888887753
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.46 E-value=3.7e-07 Score=93.98 Aligned_cols=128 Identities=13% Similarity=0.130 Sum_probs=89.2
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC----ceeeeCcccccCCHHHHhhhccccceEeccChh
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~----~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (991)
++|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..+....... .. ......+|.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~ 150 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSF-----------KE-LDNSNGACD 150 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBE-----------EE-EECTTSTTT
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCce-----------ec-cCCCCCCcc
Confidence 7899999999999999999999999999999999999985311 0111111100 00 011234556
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCChHhhhh----CCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHE----ADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~----Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
.|...+........+.++++||+.||.+|+++ +.++++|+ +..+..+..||+++.+ +..+.+++
T Consensus 151 ~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~~--~~el~~~l 218 (219)
T 3kd3_A 151 SKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVARN--VAELASLI 218 (219)
T ss_dssp CHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEESS--HHHHHHHH
T ss_pred cHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeCC--HHHHHHhh
Confidence 67666655522225789999999999999975 35555555 5667788899999855 77776543
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.44 E-value=9.3e-07 Score=97.03 Aligned_cols=69 Identities=25% Similarity=0.279 Sum_probs=60.1
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEec-cCCchHHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIIL-DDNFSTIVTVAKW 805 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~-~~~~~~i~~~i~~ 805 (991)
.+|...++.+.+.+| +.++++||+.||.+|++.|++|++|| ++.+..++.||+++. +++-.++.+++++
T Consensus 223 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~~ 295 (301)
T 2b30_A 223 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLKK 295 (301)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHHH
Confidence 478888888877655 46899999999999999999999999 888888999999998 8888899887753
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.44 E-value=3.3e-07 Score=95.27 Aligned_cols=125 Identities=12% Similarity=0.136 Sum_probs=92.2
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.++... ....|
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~ 144 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDG--------------------KLSTK 144 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTS--------------------SSCSH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCC--------------------CCCCC
Confidence 3578999999999999999999999999999999999999864322333322210 11234
Q ss_pred HHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCe---eEEecCCCcHH-HHhhcCEEeccCCchHHHHHHHH
Q 001960 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAGTEV-AKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 739 ~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Adv---giamg~~g~~~-ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
...++.+.+++| +.++++||+.||..|.+.|++ +++||....+. .+..||+++.+ +..+.+++..
T Consensus 145 ~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s--~~el~~~~~~ 216 (226)
T 3mc1_A 145 EDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNS--VDELHKKILE 216 (226)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESS--HHHHHHHHHT
T ss_pred HHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECC--HHHHHHHHHH
Confidence 455555444434 579999999999999999999 88888333333 36889999955 8888887653
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.43 E-value=8.9e-07 Score=90.89 Aligned_cols=127 Identities=18% Similarity=0.113 Sum_probs=93.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...- +.++.+.+.. ....-...|+.|
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~-------------~~~~~~p~p~~~ 134 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR-------------VVGYQLRQKDPK 134 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSC-------------EEEEECCSSSHH
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCce-------------EEeeecCCCchH
Confidence 5789999999999999 999999999999999999999986421 1122222100 000012578899
Q ss_pred HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 001960 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 739 ~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
...++.+... ++.++|+||+.||.+|.+.|+++++++ ...+..+.+.+++ .-+++..+.+++
T Consensus 135 ~~~l~~l~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~-~~~~~~~l~~~l 196 (206)
T 1rku_A 135 RQSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFP-AVHTYEDLKREF 196 (206)
T ss_dssp HHHHHHHHHT-TCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSC-EECSHHHHHHHH
T ss_pred HHHHHHHHhc-CCEEEEEeCChhhHHHHHhcCccEEEC-CcHHHHHHHhhhc-cccchHHHHHHH
Confidence 9999999877 789999999999999999999999985 4444433344543 235588887765
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.42 E-value=1.2e-06 Score=95.43 Aligned_cols=68 Identities=32% Similarity=0.413 Sum_probs=58.6
Q ss_pred hHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 737 ~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
+|...++.+.+++| +.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++-.++.+++++
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~~ 286 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 286 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHHH
Confidence 57777777777655 46899999999999999999999999 8888889999999988888899888753
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=6.2e-07 Score=96.03 Aligned_cols=65 Identities=20% Similarity=0.244 Sum_probs=56.2
Q ss_pred hhHHHHHHHHHhhcC-----CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g-----~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
.+|...++.+.+++| +.++++||+.||.+|++.|++|++|| ++.+ . .++++..+++-.++.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG-RGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS-SSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC-Chhh-c--CCcEEeCCCCchHHHHHHH
Confidence 688999999887766 67999999999999999999999999 7777 4 7889998888888887764
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=2.2e-06 Score=83.62 Aligned_cols=143 Identities=15% Similarity=0.247 Sum_probs=87.1
Q ss_pred ccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHH
Q 001960 457 KTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFG 536 (991)
Q Consensus 457 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a 536 (991)
..||+|-|.++++.+...+... .+++++ .+.+.. ..+.||..+|+++++
T Consensus 13 ~~~tit~gnr~vt~v~~~~g~~---------------e~elL~---lAAs~E-------------~~SeHPla~AIv~~A 61 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQGVD---------------EKTLAD---AAQLAS-------------LADETPEGRSIVILA 61 (156)
T ss_dssp --------CEEEEEEEECTTSC---------------HHHHHH---HHHHTT-------------SSCCSHHHHHHHHHH
T ss_pred CCCceecCCCeEEEEEecCCCC---------------HHHHHH---HHHHHh-------------CcCCCHHHHHHHHHH
Confidence 4799999999999987543210 012222 222211 127799999999999
Q ss_pred HHc-CCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHH
Q 001960 537 LLL-GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNET 615 (991)
Q Consensus 537 ~~~-g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~ 615 (991)
++. +........ ......||++..++.++.+ ++ +-+.+|++..|...+.. .|. .+.+ .+.+.
T Consensus 62 ~~~~~l~~~~~~~--~~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn~~~i~~l~~~----~gi--~~~~----~~~~~ 124 (156)
T 1svj_A 62 KQRFNLRERDVQS--LHATFVPFTAQSRMSGINI---DN--RMIRKGSVDAIRRHVEA----NGG--HFPT----DVDQK 124 (156)
T ss_dssp HHHTTCCCCCHHH--HTCEEEEEETTTTEEEEEE---TT--EEEEEEEHHHHHHHHHH----HTC--CCCH----HHHHH
T ss_pred HHhcCCCcccccc--cccceeeccccCCCCeEEE---CC--EEEEEeCcHHHHHHHHH----cCC--CCcH----HHHHH
Confidence 877 654321100 0123579999998888843 33 24568998777665432 121 1221 25667
Q ss_pred HHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcc
Q 001960 616 IEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP 663 (991)
Q Consensus 616 ~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~ 663 (991)
+++++++|.+++.+| .|..++|++++.|++||
T Consensus 125 ~~~la~~G~T~v~VA----------------~d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 125 VDQVARQGATPLVVV----------------EGSRVLGVIALKDIVKG 156 (156)
T ss_dssp HHHHHHTTCEEEEEE----------------ETTEEEEEEEEEECCCC
T ss_pred HHHHHhCCCCEEEEE----------------ECCEEEEEEEEecCCCC
Confidence 888999999999998 35689999999999997
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.37 E-value=8.4e-07 Score=95.60 Aligned_cols=68 Identities=32% Similarity=0.455 Sum_probs=59.1
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
..|...++.+.+++| +.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++..++.++++
T Consensus 189 ~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 189 VDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred CChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 378888888877645 46899999999999999999999999 888888999999998888888888764
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.37 E-value=1e-06 Score=95.35 Aligned_cols=143 Identities=15% Similarity=0.127 Sum_probs=78.0
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCcc-----CCc-eee-eC--c-----c-c-ccCCHHHHhhhc
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT-----DNG-IAI-EG--P-----E-F-REKSDEELSKLI 724 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~-----~~~-~vi-~g--~-----~-~-~~~~~~~~~~~~ 724 (991)
+-+.+.++|++|+++|++++++||+....+..+.+++|+.. .++ .+. .+ + . . ..++.+...+++
T Consensus 27 ~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 106 (275)
T 1xvi_A 27 DWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVL 106 (275)
T ss_dssp SCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCTTSTTTTEEECSSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCcccccCceEEEecCCCHHHHHHHH
Confidence 44678999999999999999999999999999999998753 122 222 22 1 0 0 112211110000
Q ss_pred --------------------------------------ccc--ceEec----------------------------cCh-
Q 001960 725 --------------------------------------PKI--QVMAR----------------------------SSP- 735 (991)
Q Consensus 725 --------------------------------------~~~--~v~ar----------------------------~sP- 735 (991)
... .++.. ..|
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~leI~~~ 186 (275)
T 1xvi_A 107 NTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDA 186 (275)
T ss_dssp HHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHHHHHHHTTEEEEECSSCEEEEET
T ss_pred HHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCHHHHHHHHHHHHhhCeEEEECCceEEEecC
Confidence 000 00100 111
Q ss_pred -hhHHHHHHHHHhhcC----CE--EEEeCCCCCChHhhhhCCeeEEecCCCc---HHHHhh--cC-EEeccCCchHHHHH
Q 001960 736 -MDKHTLVKHLRTTLG----EV--VAVTGDGTNDAPALHEADIGLAMGIAGT---EVAKES--AD-VIILDDNFSTIVTV 802 (991)
Q Consensus 736 -~~K~~~v~~l~~~~g----~~--v~~iGDG~ND~~al~~Advgiamg~~g~---~~ak~~--ad-~vl~~~~~~~i~~~ 802 (991)
.+|...++.+.+.+| +. ++++||+.||.+|++.|++|++|| ++. +..++. || +++.+++-.++.++
T Consensus 187 ~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~ 265 (275)
T 1xvi_A 187 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK-GLNREGVHLHDEDPARVWRTQREGPEGWREG 265 (275)
T ss_dssp TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC-CCC----------------------------
T ss_pred CCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEec-CCCccchhhccccCCceeEccCCCchHHHHH
Confidence 357777777665544 34 899999999999999999999999 776 444543 78 88888888888877
Q ss_pred HH
Q 001960 803 AK 804 (991)
Q Consensus 803 i~ 804 (991)
++
T Consensus 266 l~ 267 (275)
T 1xvi_A 266 LD 267 (275)
T ss_dssp --
T ss_pred HH
Confidence 65
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.35 E-value=1.8e-06 Score=90.33 Aligned_cols=109 Identities=18% Similarity=0.153 Sum_probs=78.8
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC--CceeeeCcccccCCHHHHhhhccccceE-eccChh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEELSKLIPKIQVM-ARSSPM 736 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~--~~~vi~g~~~~~~~~~~~~~~~~~~~v~-ar~sP~ 736 (991)
+++||+.+.++.|++.|+++.++||.....+..+++.+|+..- .........+. -.+. ..+.+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-------------g~~~~~~~~~~ 158 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYT-------------GRIEGTPSFRE 158 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEE-------------EEEESSCSSTH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEe-------------eeecCCCCcch
Confidence 5799999999999999999999999999999999999998521 00000000000 0011 112346
Q ss_pred hHHHHHHHHHhhcC------CEEEEeCCCCCChHhhhhCCeeEEecCCCcHH
Q 001960 737 DKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (991)
Q Consensus 737 ~K~~~v~~l~~~~g------~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ 782 (991)
.|...++.+.++.| +.++++||+.||.+|++.|++++++. ...+.
T Consensus 159 ~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~-~~~~l 209 (232)
T 3fvv_A 159 GKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN-PSPGL 209 (232)
T ss_dssp HHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES-CCHHH
T ss_pred HHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC-cCHHH
Confidence 78877777655545 67999999999999999999999985 44433
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.31 E-value=8.1e-07 Score=92.55 Aligned_cols=129 Identities=20% Similarity=0.291 Sum_probs=89.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCc-ccccCCHHHHhhhccccceEe------c
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGP-EFREKSDEELSKLIPKIQVMA------R 732 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~-~~~~~~~~~~~~~~~~~~v~a------r 732 (991)
++.||+.+.++.|+++|+++.++|+.....+..+.+.+|+..+. ++... .+. ....+.+ .
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~--~f~~~~~~~-----------~~~~~~~~~~~~~~ 152 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFANRLKFY-----------FNGEYAGFDETQPT 152 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEECEEEC-----------TTSCEEEECTTSGG
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCccc--EEeeeEEEc-----------CCCcEecCCCCCcc
Confidence 68899999999999999999999999999999999999986310 11000 000 0000111 1
Q ss_pred cChhhHHHHHHHHHhhcC-CEEEEeCCCCCChHhhhhCCeeEEecCCC-cHHHHhhcCEEeccCCchHHHHHH
Q 001960 733 SSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMGIAG-TEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 733 ~sP~~K~~~v~~l~~~~g-~~v~~iGDG~ND~~al~~Advgiamg~~g-~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
+.+..|..+++.+.+++| +.++++||+.||.+|.+.|+++|++|... .+.....+|+++.+ +..+.+++
T Consensus 153 ~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 223 (225)
T 1nnl_A 153 AESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD--FVELLGEL 223 (225)
T ss_dssp GSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC--GGGGCC--
T ss_pred cCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecC--HHHHHHHH
Confidence 123467777777666546 67999999999999999999988887322 23445678999854 77665543
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.29 E-value=1.1e-06 Score=90.71 Aligned_cols=122 Identities=16% Similarity=0.239 Sum_probs=84.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+.... .....|.--.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~kp~~~~~~ 157 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLP----------------YSKPHPQVYL 157 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSS----------------CCTTSTHHHH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccC----------------CCCCChHHHH
Confidence 456899999999999999999999999988888889888864322333322210 0111122223
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEe----cCCCcHHHHhhcCEEeccCCchHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVAKESADVIILDDNFSTIVT 801 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiam----g~~g~~~ak~~ad~vl~~~~~~~i~~ 801 (991)
.+.+.+.-. .+.++++||+.||.+|++.|+++++| + ++.+..+..||+++.+ +..+..
T Consensus 158 ~~~~~~~i~-~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~~--~~el~~ 219 (226)
T 1te2_A 158 DCAAKLGVD-PLTCVALEDSVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLSS--LTELTA 219 (226)
T ss_dssp HHHHHHTSC-GGGEEEEESSHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECSC--GGGCCH
T ss_pred HHHHHcCCC-HHHeEEEeCCHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEECC--HHHHhH
Confidence 333333322 25689999999999999999999998 5 4444567889999855 555543
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.28 E-value=7.5e-07 Score=92.78 Aligned_cols=124 Identities=15% Similarity=0.089 Sum_probs=90.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|++.|+++.++|+.....+..+.+..|+...-+.++.+.+.. . ...|.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~--~kp~~ 150 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVS------------------Y--GKPDP 150 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSS------------------C--CTTST
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCC------------------C--CCCCh
Confidence 457899999999999999999999999999999999999865333333332211 1 11233
Q ss_pred HHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCe---eEEecCCCcHHHHhh-cCEEeccCCchHHHHHHHH
Q 001960 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAGTEVAKES-ADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Adv---giamg~~g~~~ak~~-ad~vl~~~~~~~i~~~i~~ 805 (991)
..++.+.+++| +.++++||+.||..|.+.|++ ++++|.+..+..++. ||+++.+ +..+.++++.
T Consensus 151 ~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~--~~el~~~l~~ 221 (233)
T 3s6j_A 151 DLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYED--PLDLLNHLDE 221 (233)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESS--HHHHHHTGGG
T ss_pred HHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECC--HHHHHHHHHH
Confidence 44444444434 569999999999999999999 777774555555554 9999855 8888887754
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.28 E-value=6.3e-07 Score=92.52 Aligned_cols=122 Identities=11% Similarity=0.065 Sum_probs=81.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|++.|+++.++|++ ..+..+.+.+|+...-..++.+++.. .....|+--.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 152 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVA----------------ASKPAPDIFI 152 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSS----------------SCTTSSHHHH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCC----------------CCCCChHHHH
Confidence 46789999999999999999999998 44566777888754322333332210 0111122222
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 802 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~ 802 (991)
.+.+.+.-. .+.++++||+.||.+|++.|+++++|+ ++.+..+ .||+++.+.+-..+..+
T Consensus 153 ~~~~~lgi~-~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~~~el~~~~~ 212 (221)
T 2wf7_A 153 AAAHAVGVA-PSESIGLEDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPDTSHYTLEFL 212 (221)
T ss_dssp HHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESSGGGCCHHHH
T ss_pred HHHHHcCCC-hhHeEEEeCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcCHHhCCHHHH
Confidence 233333222 256899999999999999999999998 6776666 89999866443334433
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.27 E-value=8.3e-07 Score=96.66 Aligned_cols=132 Identities=18% Similarity=0.155 Sum_probs=92.0
Q ss_pred CCcccHHHHHHHHHHC-CCEEEEEcCC---------------------CHHHHHHHHHHcCCccCCceeeeCcccccCCH
Q 001960 660 PMRPGVKESVAICRSA-GITVRMVTGD---------------------NINTAKAIARECGILTDNGIAIEGPEFREKSD 717 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~a-Gi~v~mlTGD---------------------~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~ 717 (991)
..++++.+.++.+++. |+++.+.|.. ....+..+.+..|+... +.........
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~~~~~-- 196 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVN---INRCNPLAGD-- 196 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEE---EEECCGGGTC--
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEE---EEEccccccC--
Confidence 4578999999999998 9998888876 34455555566665321 0000000000
Q ss_pred HHHhhhccccceEeccC--hhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEec
Q 001960 718 EELSKLIPKIQVMARSS--PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIIL 792 (991)
Q Consensus 718 ~~~~~~~~~~~v~ar~s--P~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~ 792 (991)
+....+.... ...|...++.+.+++| +.++++||+.||.+|++.|++|++|| ++.+..++.||+++.
T Consensus 197 -------~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~~~~~~a~~v~~ 268 (289)
T 3gyg_A 197 -------PEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQEAKNLHNLITD 268 (289)
T ss_dssp -------CTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCHHHHHHCCCBCS
T ss_pred -------CCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccHHHHHhCCEEcC
Confidence 0000122222 2467888887776655 46899999999999999999999999 888889999999998
Q ss_pred cCCchHHHHHHH
Q 001960 793 DDNFSTIVTVAK 804 (991)
Q Consensus 793 ~~~~~~i~~~i~ 804 (991)
+++-.++.++++
T Consensus 269 ~~~~~gv~~~~~ 280 (289)
T 3gyg_A 269 SEYSKGITNTLK 280 (289)
T ss_dssp SCHHHHHHHHHH
T ss_pred CCCcCHHHHHHH
Confidence 887778887775
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.26 E-value=1.2e-06 Score=93.81 Aligned_cols=126 Identities=20% Similarity=0.230 Sum_probs=85.8
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
++.|++.+.++.|++.|+++.++|++....+..+.+.+|+...- ..++.++... .....|.--
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------------~~kp~~~~~ 166 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVP----------------AGRPYPWMC 166 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSS----------------CCTTSSHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccC----------------CCCCCHHHH
Confidence 46789999999999999999999999998888888888765321 2222222110 011223333
Q ss_pred HHHHHHHHhhcC-CEEEEeCCCCCChHhhhhCC---eeEEecCCC------------------------cHHHHh-hcCE
Q 001960 739 HTLVKHLRTTLG-EVVAVTGDGTNDAPALHEAD---IGLAMGIAG------------------------TEVAKE-SADV 789 (991)
Q Consensus 739 ~~~v~~l~~~~g-~~v~~iGDG~ND~~al~~Ad---vgiamg~~g------------------------~~~ak~-~ad~ 789 (991)
..+.+.+.-. . +.++++||+.||.+|++.|+ +++++| ++ .+..++ .||+
T Consensus 167 ~~~~~~lgi~-~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 244 (267)
T 1swv_A 167 YKNAMELGVY-PMNHMIKVGDTVSDMKEGRNAGMWTVGVILG-SSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 244 (267)
T ss_dssp HHHHHHHTCC-SGGGEEEEESSHHHHHHHHHTTSEEEEECTT-CTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHhCCC-CCcCEEEEeCCHHHHHHHHHCCCEEEEEcCC-CCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCce
Confidence 3444444322 3 56999999999999999999 677777 44 233344 4999
Q ss_pred EeccCCchHHHHHHHH
Q 001960 790 IILDDNFSTIVTVAKW 805 (991)
Q Consensus 790 vl~~~~~~~i~~~i~~ 805 (991)
++. ++..+..++..
T Consensus 245 v~~--~~~el~~~l~~ 258 (267)
T 1swv_A 245 TIE--TMQELESVMEH 258 (267)
T ss_dssp EES--SGGGHHHHHHH
T ss_pred ecc--CHHHHHHHHHH
Confidence 985 48888877643
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.21 E-value=2.2e-06 Score=89.48 Aligned_cols=123 Identities=15% Similarity=0.151 Sum_probs=77.7
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+...-..++.+++.. .....|+--.
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~~~~~~ 153 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLA----------------KGKPDPDIFL 153 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC-------------------------CCHHH
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCC----------------CCCCChHHHH
Confidence 4689999999999999999999999754 777888899865333333332210 1111122223
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
.+.+.+.-. .+.++++||+.||+.|.+.|+++++|. ++.+..+ .||+++.+.+-..+..++
T Consensus 154 ~~~~~lgi~-~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~v~~s~~el~~~~~~ 214 (233)
T 3nas_A 154 TAAAMLDVS-PADCAAIEDAEAGISAIKSAGMFAVGV-GQGQPML-GADLVVRQTSDLTLELLH 214 (233)
T ss_dssp HHHHHHTSC-GGGEEEEECSHHHHHHHHHTTCEEEEC-C--------CSEECSSGGGCCHHHHH
T ss_pred HHHHHcCCC-HHHEEEEeCCHHHHHHHHHcCCEEEEE-CCccccc-cCCEEeCChHhCCHHHHH
Confidence 333433322 367899999999999999999999998 5555555 899999764333333343
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.21 E-value=2.1e-06 Score=91.36 Aligned_cols=57 Identities=25% Similarity=0.228 Sum_probs=47.5
Q ss_pred hhHHHHHHHHHhhc---C-CEEEEeCCCCCChHhhhhCCeeEEecCCCc-HHHHhhcCEEecc
Q 001960 736 MDKHTLVKHLRTTL---G-EVVAVTGDGTNDAPALHEADIGLAMGIAGT-EVAKESADVIILD 793 (991)
Q Consensus 736 ~~K~~~v~~l~~~~---g-~~v~~iGDG~ND~~al~~Advgiamg~~g~-~~ak~~ad~vl~~ 793 (991)
.+|...++.+.+.+ + +.|+++||+.||.+||+.|++|+||| ++. +..++.||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~g-na~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeC-CCCccccchhceEEecc
Confidence 46998888887662 2 57999999999999999999999999 777 6677788887654
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.20 E-value=1.1e-06 Score=90.71 Aligned_cols=120 Identities=18% Similarity=0.158 Sum_probs=80.8
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHH
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~ 740 (991)
+.|++.+.++.|++.|+++.++|+..........+.+|+...-..++.+++. ....| |..
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~k~--~~~ 149 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDV------------------THHKP--DPE 149 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGC------------------SSCTT--STH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhc------------------CCCCC--ChH
Confidence 3689999999999999999999999999898888888876432233322211 11112 223
Q ss_pred HHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEe----cCCCcHHHHhh-cCEEeccCCchHHHHHH
Q 001960 741 LVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVAKES-ADVIILDDNFSTIVTVA 803 (991)
Q Consensus 741 ~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiam----g~~g~~~ak~~-ad~vl~~~~~~~i~~~i 803 (991)
.++.+.+++| +.++++||+.||.+|++.|+++++| + +..+..+.. ||+++.+ +..+.+.+
T Consensus 150 ~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~-~~~~~l~~~~ad~v~~~--~~el~~~l 217 (225)
T 3d6j_A 150 GLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGM-TTAQEFQAYPYDRIIST--LGQLISVP 217 (225)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSS-CCTTGGGGSCCSEEESS--GGGGC---
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCC-CChHHHhhcCCCEEECC--HHHHHHhh
Confidence 3333333324 4688999999999999999999887 4 333334444 9999854 66666555
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.20 E-value=3.5e-06 Score=87.80 Aligned_cols=122 Identities=18% Similarity=0.212 Sum_probs=82.7
Q ss_pred CCcccHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~a-Gi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
++.|++.+.++.|++. |+++.++|+.....+..+.+.+|+...-..++.+.+ +.. .|..+
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~-----------------~~~--~~k~~ 153 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADD-----------------ALD--RNELP 153 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTT-----------------CSS--GGGHH
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCC-----------------CcC--ccchH
Confidence 4579999999999999 999999999999999999999998643222233322 101 12223
Q ss_pred HHHHHHHHhhcC-----CEEEEeCCCCCChHhhhhCC---eeEEecCCCcHH-HHh-hcCEEeccCCchHHHHHH
Q 001960 739 HTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEAD---IGLAMGIAGTEV-AKE-SADVIILDDNFSTIVTVA 803 (991)
Q Consensus 739 ~~~v~~l~~~~g-----~~v~~iGDG~ND~~al~~Ad---vgiamg~~g~~~-ak~-~ad~vl~~~~~~~i~~~i 803 (991)
...++.+.+++| +.++++||+.||.+|.+.|+ +++++| .+... .+. .+|+++.+ +..+.+++
T Consensus 154 ~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~~~a~~v~~~--~~el~~~l 225 (234)
T 2hcf_A 154 HIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATG-NFTMEELARHKPGTLFKN--FAETDEVL 225 (234)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCS-SSCHHHHHTTCCSEEESC--SCCHHHHH
T ss_pred HHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEeCC--HHhHHHHH
Confidence 333343333324 46899999999999999999 566666 33333 222 38999865 66666554
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.17 E-value=2.7e-06 Score=89.32 Aligned_cols=123 Identities=15% Similarity=0.162 Sum_probs=88.7
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.++.++... .+..|
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~ 168 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDG--------------------TRVNK 168 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTS--------------------CCCCH
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccC--------------------CCCCC
Confidence 3568999999999999999999999999999999999999864322333222110 11234
Q ss_pred HHHHHHHHhhcC----CEEEEeCCCCCChHhhhhCCe---eEEecCCCcHH-HHhhcCEEeccCCchHHHHHH
Q 001960 739 HTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADI---GLAMGIAGTEV-AKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 739 ~~~v~~l~~~~g----~~v~~iGDG~ND~~al~~Adv---giamg~~g~~~-ak~~ad~vl~~~~~~~i~~~i 803 (991)
...++.+.+++| +.++++||+.||..|.+.|++ ++++|....+. .+..+|+++.+ +..+.+++
T Consensus 169 ~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~--~~el~~~l 239 (240)
T 3sd7_A 169 NEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVEN--VESIKDIL 239 (240)
T ss_dssp HHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESS--STTHHHHH
T ss_pred HHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECC--HHHHHHHh
Confidence 455555444433 358999999999999999999 77777333333 35789999965 77777654
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.17 E-value=1.4e-06 Score=92.23 Aligned_cols=123 Identities=22% Similarity=0.294 Sum_probs=85.4
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+++... ....|+--
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~----------------~Kp~~~~~ 176 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPE----------------IKPHPAPF 176 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSS----------------CTTSSHHH
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCC----------------CCcCHHHH
Confidence 35779999999999999999999999999999999999998643333444332110 11123333
Q ss_pred HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE-ecCC----CcHHHHhhcCEEeccCCchHHHH
Q 001960 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-MGIA----GTEVAKESADVIILDDNFSTIVT 801 (991)
Q Consensus 739 ~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia-mg~~----g~~~ak~~ad~vl~~~~~~~i~~ 801 (991)
..+.+.+.-. .+.++++||+.||.+|.+.|+++.. +. . +.+..+..+|+++.+ +..+.+
T Consensus 177 ~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~ad~vi~~--~~el~~ 240 (243)
T 2hsz_A 177 YYLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVGLT-YGYNYNIPIAQSKPDWIFDD--FADILK 240 (243)
T ss_dssp HHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEES-SSCSTTCCGGGGCCSEEESS--GGGGGG
T ss_pred HHHHHHhCcC-hhhEEEEcCCHHHHHHHHHCCCeEEEEc-CCCCchhhhhhCCCCEEECC--HHHHHH
Confidence 3344444322 3568999999999999999998844 33 2 234456789999854 666554
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.16 E-value=1.4e-06 Score=90.83 Aligned_cols=126 Identities=10% Similarity=0.076 Sum_probs=91.0
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+.+.. ...-.|.--.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~kp~~~~~~ 162 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVR----------------LYKTAPAAYA 162 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTT----------------CCTTSHHHHT
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccC----------------CCCcCHHHHH
Confidence 467899999999999999999999999999999999999865433333332211 1111222223
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEe----cCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiam----g~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
.+.+.+.-. .+.++++||+.||..|.+.|+++++| + ++.+..+..+|+++.+ +..+.+++..
T Consensus 163 ~~~~~~~~~-~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~~~--~~el~~~l~~ 228 (233)
T 3umb_A 163 LAPRAFGVP-AAQILFVSSNGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAGHD--MRDLLQFVQA 228 (233)
T ss_dssp HHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEESS--HHHHHHHHHC
T ss_pred HHHHHhCCC-cccEEEEeCCHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEECC--HHHHHHHHHH
Confidence 333333322 25689999999999999999999999 5 4455556779999965 8888887754
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.16 E-value=1.9e-06 Score=89.60 Aligned_cols=123 Identities=11% Similarity=0.085 Sum_probs=87.6
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+.+.. .. ..|
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~~--kp~ 154 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVR------------------LF--KPH 154 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTT------------------CC--TTC
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcc------------------cC--CCC
Confidence 3568899999999999999999999999999999999999864322333332211 11 112
Q ss_pred HHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecC---CCcHHHHhhcCEEeccCCchHHHHHH
Q 001960 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGI---AGTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 739 ~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~---~g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
...++.+.+++| +.++++||+.||..|.+.|+++++|-. +..+..+..+|+++.+ +..+..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 223 (230)
T 3um9_A 155 QKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSD--VGVLASRF 223 (230)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESS--HHHHHHTC
T ss_pred hHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCC--HHHHHHHH
Confidence 333333333324 568999999999999999999999821 3444456789999865 77777654
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.14 E-value=6.5e-06 Score=85.72 Aligned_cols=124 Identities=19% Similarity=0.201 Sum_probs=87.9
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...-..++.+++.. .....|.--.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~----------------~~kp~~~~~~ 162 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAG----------------FFKPHPRIFE 162 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHT----------------BCTTSHHHHH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccC----------------CCCcCHHHHH
Confidence 5678999999999999 9999999999999999999999864322233222110 0111222222
Q ss_pred HHHHHHHhhcCCEEEEeCCCC-CChHhhhhCC---eeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGT-NDAPALHEAD---IGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~-ND~~al~~Ad---vgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
.+.+.+.-. .+.++++||+. ||..|.+.|+ +++++| ++.+..++.+|+++.+ +..+.++++
T Consensus 163 ~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~~--~~el~~~l~ 227 (234)
T 3u26_A 163 LALKKAGVK-GEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVSD--LREVIKIVD 227 (234)
T ss_dssp HHHHHHTCC-GGGEEEEESCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEESS--THHHHHHHH
T ss_pred HHHHHcCCC-chhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeCC--HHHHHHHHH
Confidence 333333222 26799999997 9999999999 677778 6666667799999965 888887664
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.14 E-value=1.6e-06 Score=88.57 Aligned_cols=123 Identities=15% Similarity=0.165 Sum_probs=86.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+++.. .....|+--.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~kp~~~~~~ 152 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFK----------------ESKPNPEIYL 152 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCS----------------SCTTSSHHHH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeeccccc----------------CCCCChHHHH
Confidence 568999999999999999999999999999999999999865333344333211 0111222223
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCC-cHHHHhhcCEEeccCCchHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG-TEVAKESADVIILDDNFSTIVT 801 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g-~~~ak~~ad~vl~~~~~~~i~~ 801 (991)
.+.+.+.-. .+.++++||+.||..|.+.|+++++|..++ ....+..+|+++.+ +..+.+
T Consensus 153 ~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~--~~el~~ 212 (214)
T 3e58_A 153 TALKQLNVQ-ASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDS--LTDVLD 212 (214)
T ss_dssp HHHHHHTCC-GGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESS--GGGGGG
T ss_pred HHHHHcCCC-hHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHH--HHHHHh
Confidence 333333322 356899999999999999999998886443 33345779999855 665543
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.13 E-value=4.2e-06 Score=87.03 Aligned_cols=121 Identities=12% Similarity=0.149 Sum_probs=84.5
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhh
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDN---INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~---~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 737 (991)
+.|++.+.++.|++.|+++.++|+.. ......+.+.+|+...-..++.+.+. ....|
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~kp-- 159 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEV------------------LSYKP-- 159 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHH------------------TCCTT--
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheecccc------------------CCCCC--
Confidence 47999999999999999999999999 88888888999886432223322211 01112
Q ss_pred HHHHHHHHHhhcC---CEEEEeCCCC-CChHhhhhCCeeEEe---cCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 738 KHTLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAM---GIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 738 K~~~v~~l~~~~g---~~v~~iGDG~-ND~~al~~Advgiam---g~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
|..+.+.+.+++| +.++++||+. ||..|.+.|+++++| | +..+..+..+|+++.+ +..+.+++.
T Consensus 160 ~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~--~~el~~~l~ 230 (235)
T 2om6_A 160 RKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQE-GDKVRKLEERGFEIPS--IANLKDVIE 230 (235)
T ss_dssp CHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTT-CCSCEEEETTEEEESS--GGGHHHHHH
T ss_pred CHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCC-CCCcccCCCCcchHhh--HHHHHHHHH
Confidence 2233333333334 5789999999 999999999999999 4 3333334568888744 777776653
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.12 E-value=2e-06 Score=87.24 Aligned_cols=119 Identities=18% Similarity=0.198 Sum_probs=81.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|++.|+++.++|++...... ..+.+|+...-..++.+.+.. .....|+--.
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 147 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGF----------------VRKPSPEAAT 147 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCC----------------CCTTSSHHHH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCC----------------CCCCCcHHHH
Confidence 45799999999999999999999999988887 888888753212222221110 0111122223
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee-EEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg-iamg~~g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
.+.+.+.-. .+.++++||+.||.+|++.|+++ ++|+ +|. . .||+++.+ +..+.+++
T Consensus 148 ~~~~~~~i~-~~~~~~iGD~~nDi~~~~~aG~~~i~~~-~~~-~---~a~~v~~~--~~el~~~l 204 (207)
T 2go7_A 148 YLLDKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFL-EST-Y---EGNHRIQA--LADISRIF 204 (207)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESS-CCS-C---TTEEECSS--TTHHHHHT
T ss_pred HHHHHhCCC-cccEEEECCCHHHHHHHHHCCCeEEEEe-cCC-C---CCCEEeCC--HHHHHHHH
Confidence 334444322 35689999999999999999997 8888 665 2 68998854 77776554
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.10 E-value=3.3e-06 Score=88.91 Aligned_cols=138 Identities=14% Similarity=0.132 Sum_probs=90.9
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc--cccceEeccChh
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI--PKIQVMARSSPM 736 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~--~~~~v~ar~sP~ 736 (991)
-++.|++.+.++.|+++|+++.++|+.....+..+.+ |+... ..++.++....- ..+...+ |....+-+....
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~--~~~~~~~~kp~p~~~~~~~~~ 150 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDN--DYIHIDWPHSCKGTCSNQCGC 150 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSS--SBCEEECTTCCCTTCCSCCSS
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcC--CceEEecCCCCccccccccCC
Confidence 3678999999999999999999999999988888887 76433 334443321100 0000000 000101111245
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhh--cCEEeccCCchHHHHHHHH
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES--ADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~--ad~vl~~~~~~~i~~~i~~ 805 (991)
+|..+++.+... .+.++|+||+.||+++.+.|++.++.+ ...+..++. +|+++. ++..+.+++..
T Consensus 151 ~K~~~~~~~~~~-~~~~~~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~--~~~el~~~l~~ 217 (236)
T 2fea_A 151 CKPSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPYQ--DFYEIRKEIEN 217 (236)
T ss_dssp CHHHHHHHHCCT-TCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECCS--SHHHHHHHHHT
T ss_pred cHHHHHHHHhcc-CCeEEEEeCChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeecC--CHHHHHHHHHH
Confidence 788888888755 678999999999999999999998753 212223333 777774 48888876643
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.10 E-value=5.1e-06 Score=89.00 Aligned_cols=127 Identities=15% Similarity=0.039 Sum_probs=86.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC-CceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD-NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~-~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.+++.. .....|.--
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------------~~kp~~~~~ 174 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVV----------------RGRPFPDMA 174 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSS----------------SCTTSSHHH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcC----------------CCCCCHHHH
Confidence 5678999999999999999999999999999999998887543 23333332211 011122222
Q ss_pred HHHHHHHHhhcC-CEEEEeCCCCCChHhhhhCC---eeEEecCC-----------------------CcHHHH-hhcCEE
Q 001960 739 HTLVKHLRTTLG-EVVAVTGDGTNDAPALHEAD---IGLAMGIA-----------------------GTEVAK-ESADVI 790 (991)
Q Consensus 739 ~~~v~~l~~~~g-~~v~~iGDG~ND~~al~~Ad---vgiamg~~-----------------------g~~~ak-~~ad~v 790 (991)
..+.+.+.-. . +.++++||+.||..|.+.|+ |+|++|.+ ..+..+ ..+|++
T Consensus 175 ~~~~~~lgi~-~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v 253 (277)
T 3iru_A 175 LKVALELEVG-HVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYV 253 (277)
T ss_dssp HHHHHHHTCS-CGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHcCCC-CCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEE
Confidence 3333434333 3 56999999999999999999 56777622 122333 459999
Q ss_pred eccCCchHHHHHHHH
Q 001960 791 ILDDNFSTIVTVAKW 805 (991)
Q Consensus 791 l~~~~~~~i~~~i~~ 805 (991)
+.+ +..+.+++..
T Consensus 254 ~~~--~~el~~~l~~ 266 (277)
T 3iru_A 254 IDS--VADLETVITD 266 (277)
T ss_dssp ESS--GGGTHHHHHH
T ss_pred ecC--HHHHHHHHHH
Confidence 955 8888877643
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.09 E-value=3.9e-06 Score=87.36 Aligned_cols=126 Identities=16% Similarity=0.124 Sum_probs=86.8
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+.+.. .....|+-.
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~~~~~ 145 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFG----------------EKKPSPTPV 145 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSC----------------TTCCTTHHH
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCC----------------CCCCChHHH
Confidence 3568999999999999999999999999999999999999864323333333210 112233333
Q ss_pred HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee-EEecC-CCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGI-AGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 739 ~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg-iamg~-~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
..+.+.+.-. .+.++++||+.||.+|.+.|++. |++.. .+.... ..+|+++.+ +..+.+++.
T Consensus 146 ~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~--~~el~~~l~ 209 (222)
T 2nyv_A 146 LKTLEILGEE-PEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSR--PSDLVKLMD 209 (222)
T ss_dssp HHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESS--TTHHHHHHH
T ss_pred HHHHHHhCCC-chhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECC--HHHHHHHHH
Confidence 4444444333 35689999999999999999987 55541 212212 568988854 888877654
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.08 E-value=2.8e-06 Score=91.95 Aligned_cols=127 Identities=13% Similarity=0.023 Sum_probs=88.5
Q ss_pred CCCcccHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChh
Q 001960 659 DPMRPGVKESVAICRSAGI--TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi--~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (991)
-++.|++.+.++.|++.|+ ++.++|+.....+..+.+.+|+...-+.++.+..... .. ..+.
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~--------------~~--~~~K 204 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRT--------------DT--LVCK 204 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSC--------------SS--CCCT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCC--------------cc--cCCC
Confidence 3568999999999999999 9999999999999999999998654334443322110 00 1122
Q ss_pred hHHHHHHHHHhhcC----CEEEEeCCCCCChHhhhhCCeeEEecCCCcHH-----HHhhcCEEeccCCchHHHHHH
Q 001960 737 DKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV-----AKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 737 ~K~~~v~~l~~~~g----~~v~~iGDG~ND~~al~~Advgiamg~~g~~~-----ak~~ad~vl~~~~~~~i~~~i 803 (991)
.|...++.+.+++| +.++++||+.||..|.+.|++|.+|+...... ....||+++.+ +..+.+++
T Consensus 205 p~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~s--l~el~~~l 278 (282)
T 3nuq_A 205 PHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISD--ILELPHVV 278 (282)
T ss_dssp TSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESS--GGGGGGTS
T ss_pred cCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCC--HHHHHHHh
Confidence 33444444433323 57999999999999999999999998443322 13478899855 77766544
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.08 E-value=5.9e-06 Score=86.11 Aligned_cols=122 Identities=15% Similarity=0.127 Sum_probs=83.4
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.++.+.+.. .....|+--.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~~~~~~ 166 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTG----------------TIKPSPEPVL 166 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSS----------------CCTTSSHHHH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccC----------------CCCCChHHHH
Confidence 468999999999999999999999999999999999999864322333322210 0111222223
Q ss_pred HHHHHHHhhcCC-EEEEeCCCCCChHhhhhCCe-eEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 740 TLVKHLRTTLGE-VVAVTGDGTNDAPALHEADI-GLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 740 ~~v~~l~~~~g~-~v~~iGDG~ND~~al~~Adv-giamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
.+.+.+.-. .+ .++++||+.||..|.+.|++ ++.++ ++.+ ..+|+++.+ +..+.+++.
T Consensus 167 ~~~~~lgi~-~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~~~--~~el~~~l~ 226 (231)
T 3kzx_A 167 AALTNINIE-PSKEVFFIGDSISDIQSAIEAGCLPIKYG-STNI---IKDILSFKN--FYDIRNFIC 226 (231)
T ss_dssp HHHHHHTCC-CSTTEEEEESSHHHHHHHHHTTCEEEEEC-C--------CCEEESS--HHHHHHHHH
T ss_pred HHHHHcCCC-cccCEEEEcCCHHHHHHHHHCCCeEEEEC-CCCC---CCCceeeCC--HHHHHHHHH
Confidence 344444333 34 68999999999999999997 67776 5444 357888755 888777653
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.07 E-value=7e-06 Score=87.85 Aligned_cols=137 Identities=25% Similarity=0.292 Sum_probs=89.1
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCH------HHHH-HHHHHcCC-ccC------------CceeeeCcccccCCHHH-
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNI------NTAK-AIARECGI-LTD------------NGIAIEGPEFREKSDEE- 719 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~------~ta~-~ia~~~gi-~~~------------~~~vi~g~~~~~~~~~~- 719 (991)
.++.+.+.++.+++.|+.+.+.|++.. .... ..-..+++ ... ...++.+ .+++
T Consensus 86 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~------~~~~~ 159 (261)
T 2rbk_A 86 PQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFI------TEEEE 159 (261)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECC------CHHHH
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEEEe------CHHHH
Confidence 357789999999999999888887763 1111 11122232 000 0011111 1222
Q ss_pred --HhhhccccceEe--------ccChhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhh
Q 001960 720 --LSKLIPKIQVMA--------RSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES 786 (991)
Q Consensus 720 --~~~~~~~~~v~a--------r~sP~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ 786 (991)
+.+.++.+.+.. -.....|...++.+.+++| +.++++||+.||.+|++.|++|++|| ++.+..++.
T Consensus 160 ~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~~~~~~~ 238 (261)
T 2rbk_A 160 KEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAA 238 (261)
T ss_dssp HHHGGGSTTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHH
T ss_pred HHHHHhcCCeEEEEecCCeEEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec-CccHHHHhh
Confidence 222233322211 1123578888888877655 46899999999999999999999999 888888999
Q ss_pred cCEEeccCCchHHHHHHH
Q 001960 787 ADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 787 ad~vl~~~~~~~i~~~i~ 804 (991)
||+++.+.+-.++.++++
T Consensus 239 a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 239 ADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp SSEECCCGGGTHHHHHHH
T ss_pred CCEEeccCchhhHHHHHH
Confidence 999998766677888765
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.02 E-value=4.5e-06 Score=87.10 Aligned_cols=125 Identities=9% Similarity=0.052 Sum_probs=86.7
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+++.. .....|.--.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 158 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQ----------------VYKPDNRVYE 158 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGT----------------CCTTSHHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccC----------------CCCCCHHHHH
Confidence 467999999999999999999999999999999999999864333333333211 1122233333
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCC---CcHHHHhhcCEEeccCCchHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA---GTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~---g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
.+.+.+.-. .+.++++||+.||..|.+.|+++.++-.. ..+..+..+|+++.+ +..+..++
T Consensus 159 ~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 222 (232)
T 1zrn_A 159 LAEQALGLD-RSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTS--LRAVVELF 222 (232)
T ss_dssp HHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESS--HHHHHTTC
T ss_pred HHHHHcCCC-cccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECC--HHHHHHHH
Confidence 344444322 35688999999999999999999888322 223335668998854 77776554
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=7.8e-06 Score=85.86 Aligned_cols=124 Identities=10% Similarity=0.104 Sum_probs=84.0
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+++.. .....|+--.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 168 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLK----------------IYKPDPRIYQ 168 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTT----------------CCTTSHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccC----------------CCCCCHHHHH
Confidence 477999999999999999999999999999999999999864333333332211 0111222223
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee---EEecCCCcHHHHhhc-CEEeccCCchHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG---LAMGIAGTEVAKESA-DVIILDDNFSTIVTVA 803 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg---iamg~~g~~~ak~~a-d~vl~~~~~~~i~~~i 803 (991)
.+.+.+.-. .+.++++||+.||..|.+.|++. +..| .+.+..+..+ |+++.+ +..+..++
T Consensus 169 ~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~~~~~~~~~--~~el~~~l 232 (240)
T 2no4_A 169 FACDRLGVN-PNEVCFVSSNAWDLGGAGKFGFNTVRINRQ-GNPPEYEFAPLKHQVNS--LSELWPLL 232 (240)
T ss_dssp HHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCEEEEECTT-CCCCCCTTSCCSEEESS--GGGHHHHH
T ss_pred HHHHHcCCC-cccEEEEeCCHHHHHHHHHCCCEEEEECCC-CCCCcccCCCCceeeCC--HHHHHHHH
Confidence 333333322 25688999999999999999955 4445 2233334557 998854 78777655
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.01 E-value=1.6e-06 Score=98.03 Aligned_cols=114 Identities=16% Similarity=0.165 Sum_probs=77.3
Q ss_pred eeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC--CceeeeCcccccCCHHHHhhhccccceEec
Q 001960 655 VGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEELSKLIPKIQVMAR 732 (991)
Q Consensus 655 ~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~--~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 732 (991)
..--..++|++++.|+.|+++|++|+|+||.....++.+|+++|+... ...|+ |..+....+ -.+..+
T Consensus 216 ~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vi-g~~l~~~~d---------G~~tg~ 285 (385)
T 4gxt_A 216 YFVGIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVL-GLRLMKDDE---------GKILPK 285 (385)
T ss_dssp EEECCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEE-EECEEECTT---------CCEEEE
T ss_pred eccCceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEE-EeEEEEecC---------Cceeee
Confidence 333445799999999999999999999999999999999999986321 11222 222111000 001111
Q ss_pred -------cChhhHHHHHHHHHhh-cC-CEEEEeCCCCCChHhhhh-CCeeEEecCC
Q 001960 733 -------SSPMDKHTLVKHLRTT-LG-EVVAVTGDGTNDAPALHE-ADIGLAMGIA 778 (991)
Q Consensus 733 -------~sP~~K~~~v~~l~~~-~g-~~v~~iGDG~ND~~al~~-Advgiamg~~ 778 (991)
+..+.|...++.+.+. .| ..++++|||.||.+||++ +|.++++.++
T Consensus 286 ~~~~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~liin 341 (385)
T 4gxt_A 286 FDKDFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSLIIH 341 (385)
T ss_dssp ECTTSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEEEEC
T ss_pred ecCccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEEEEc
Confidence 2357799999876432 12 347788999999999986 6666665544
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.97 E-value=4.4e-05 Score=80.17 Aligned_cols=124 Identities=15% Similarity=0.100 Sum_probs=83.0
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.++.+++.. .....|+--.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 157 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEG----------------VKKPHPKIFK 157 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGT----------------CCTTCHHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCC----------------CCCCCHHHHH
Confidence 467899999999999999999999999998999999999864322333332211 0111122112
Q ss_pred HHHHHHHhhcCCEEEEeCCCC-CChHhhhhCCeeEEe---cCCCcHHHH---hhcCEEeccCCchHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIGLAM---GIAGTEVAK---ESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~-ND~~al~~Advgiam---g~~g~~~ak---~~ad~vl~~~~~~~i~~~i 803 (991)
.+.+.+.-. .+.++++||+. ||..|.+.|+++.+. | .+..... ..+|+++.+ +..+..++
T Consensus 158 ~~~~~~g~~-~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~i~~--~~el~~~l 224 (241)
T 2hoq_A 158 KALKAFNVK-PEEALMVGDRLYSDIYGAKRVGMKTVWFRYG-KHSERELEYRKYADYEIDN--LESLLEVL 224 (241)
T ss_dssp HHHHHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEECCS-CCCHHHHTTGGGCSEEESS--TTHHHHHH
T ss_pred HHHHHcCCC-cccEEEECCCchHhHHHHHHCCCEEEEECCC-CCCcccccccCCCCEEECC--HHHHHHHH
Confidence 222333222 25689999998 999999999987654 4 3333333 268998855 77777655
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.96 E-value=1.2e-05 Score=84.46 Aligned_cols=125 Identities=15% Similarity=0.124 Sum_probs=80.4
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeeeCcccccCCHHHHhhhccccceEeccChh
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~--~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (991)
.++.|++.+.++.|++.|+++.++|+.....+....+. |+...- +.++.+.+.. .....|+
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~----------------~~kp~~~ 169 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVK----------------YGKPNPE 169 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCS----------------SCTTSSH
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCC----------------CCCCCCH
Confidence 46789999999999999999999999998877777777 876432 3333333211 1112222
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee-EEecCCCcHH----HHhhcCEEeccCCchHHHHHHH
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGTEV----AKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg-iamg~~g~~~----ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
--..+.+.+.-. .+.++++||+.||..|.+.|+++ +.+. .|... .+..||+++.+ +..+.+++.
T Consensus 170 ~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~~--~~el~~~l~ 238 (247)
T 3dv9_A 170 PYLMALKKGGFK-PNEALVIENAPLGVQAGVAAGIFTIAVN-TGPLHDNVLLNEGANLLFHS--MPDFNKNWE 238 (247)
T ss_dssp HHHHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTSEEEEEC-CSSSCHHHHHTTTCSEEESS--HHHHHHHHH
T ss_pred HHHHHHHHcCCC-hhheEEEeCCHHHHHHHHHCCCeEEEEc-CCCCCHHHHHhcCCCEEECC--HHHHHHHHH
Confidence 223333333322 35689999999999999999965 3333 33222 23479999965 888777654
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.96 E-value=1.1e-05 Score=80.86 Aligned_cols=121 Identities=15% Similarity=0.144 Sum_probs=79.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCH---------------HHHHHHHHHcC--CccCCceeee-----CcccccCCH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECG--ILTDNGIAIE-----GPEFREKSD 717 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~---------------~ta~~ia~~~g--i~~~~~~vi~-----g~~~~~~~~ 717 (991)
++.|++.++++.|+++|+++.++|+... ..+..+.+.+| +.. ++. +++.
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~----~~~~~~~~~~~~----- 97 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDA----IFMCPHGPDDGC----- 97 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCE----EEEECCCTTSCC-----
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeE----EEEcCCCCCCCC-----
Confidence 5789999999999999999999999985 56667777788 321 110 0100
Q ss_pred HHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCe---eEEecCCCcHHHH----hhcCEE
Q 001960 718 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI---GLAMGIAGTEVAK----ESADVI 790 (991)
Q Consensus 718 ~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Adv---giamg~~g~~~ak----~~ad~v 790 (991)
-...-.|+-=..+.+.+.-. .+.++|+||+.||..|.+.|++ ++++| .+.+... ..+|++
T Consensus 98 -----------~~~KP~~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~~d~v 164 (179)
T 3l8h_A 98 -----------ACRKPLPGMYRDIARRYDVD-LAGVPAVGDSLRDLQAAAQAGCAPWLVQTG-NGRKTLAQGGLPEGTRV 164 (179)
T ss_dssp -----------SSSTTSSHHHHHHHHHHTCC-CTTCEEEESSHHHHHHHHHHTCEEEEESTT-THHHHHHHCCCCTTEEE
T ss_pred -----------CCCCCCHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCcEEEECCC-CcchhhhhcccCCCcEE
Confidence 00111122222333333322 3679999999999999999994 77776 4444333 457999
Q ss_pred eccCCchHHHHHHH
Q 001960 791 ILDDNFSTIVTVAK 804 (991)
Q Consensus 791 l~~~~~~~i~~~i~ 804 (991)
+.+ +..+.+++.
T Consensus 165 ~~~--l~el~~~l~ 176 (179)
T 3l8h_A 165 CED--LAAVAEQLL 176 (179)
T ss_dssp ESS--HHHHHHHHH
T ss_pred ecC--HHHHHHHHH
Confidence 865 888777653
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.93 E-value=1.1e-05 Score=84.95 Aligned_cols=124 Identities=17% Similarity=0.162 Sum_probs=82.4
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeeeCcccccCCHHHHhhhccccceEeccChhh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~--~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 737 (991)
++.|++.+.++.|++.|+++.++|+.....+....+. |+...- +.++.+++.. .....|+-
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~----------------~~kp~~~~ 171 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVK----------------YGKPNPEP 171 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCS----------------SCTTSSHH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCC----------------CCCCChHH
Confidence 5679999999999999999999999987777777776 876433 3344443311 11112222
Q ss_pred HHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee-EEecCCCcHH----HHhhcCEEeccCCchHHHHHHH
Q 001960 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGTEV----AKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 738 K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg-iamg~~g~~~----ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
-..+.+.+.-. .+.++++||+.||..|.+.|+++ +.++ +|... .+..||+++.+ +..+.++++
T Consensus 172 ~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~s--~~el~~~l~ 239 (243)
T 3qxg_A 172 YLMALKKGGLK-ADEAVVIENAPLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLFPS--MQTLCDSWD 239 (243)
T ss_dssp HHHHHHHTTCC-GGGEEEEECSHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEESC--HHHHHHHHH
T ss_pred HHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEECC--HHHHHHHHH
Confidence 22233332222 25689999999999999999985 4444 44322 23469999855 888877654
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.91 E-value=8e-06 Score=86.85 Aligned_cols=124 Identities=15% Similarity=0.150 Sum_probs=85.0
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCce-eeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI-AIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~-vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+++.. . ...| |
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~---------------~--~~Kp--~ 170 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVG---------------G--RGKP--H 170 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGT---------------T--CCTT--S
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcC---------------c--CCCC--C
Confidence 4568999999999999999999999999999999999998532111 22222110 0 1111 2
Q ss_pred HHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCee-EEecCCC-------cH-HHHhhcCEEeccCCchHHHHHHHH
Q 001960 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMGIAG-------TE-VAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 739 ~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advg-iamg~~g-------~~-~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
...++.+.+++| +.++++||+.||..|.+.|+++ +.+. .| .+ ..+..+|+++.+ +..+.+++..
T Consensus 171 ~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ad~vi~~--l~el~~~l~~ 246 (259)
T 4eek_A 171 PDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLL-VPGHPHPDGAAALSRLGAARVLTS--HAELRAALAE 246 (259)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEC-CTTSCCSSCHHHHHHHTCSEEECS--HHHHHHHHHH
T ss_pred hHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEc-cCCCcccccHHHHHhcCcchhhCC--HHHHHHHHHh
Confidence 233333333324 5799999999999999999998 4443 33 22 334559999955 8888887753
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.91 E-value=3.4e-06 Score=89.23 Aligned_cols=119 Identities=14% Similarity=0.170 Sum_probs=79.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeeeCc--ccccCCHHHHhhhccccceEeccChh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGP--EFREKSDEELSKLIPKIQVMARSSPM 736 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~-~gi~~~~~~vi~g~--~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (991)
++.|++.+.++.|++.|+++.++|+.....+.....+ .|+...-..++.++ +. ....|
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~------------------~~~Kp- 172 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEV------------------QHGKP- 172 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTC------------------CSCTT-
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhc------------------cCCCC-
Confidence 5688999999999999999999999987665543322 34432222233222 11 01111
Q ss_pred hHHHHHHHHHhhcC-----CEEEEeCCCCCChHhhhhCC---eeEEecCCCcHHHHhhcCEEeccCCchHHHH
Q 001960 737 DKHTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEAD---IGLAMGIAGTEVAKESADVIILDDNFSTIVT 801 (991)
Q Consensus 737 ~K~~~v~~l~~~~g-----~~v~~iGDG~ND~~al~~Ad---vgiamg~~g~~~ak~~ad~vl~~~~~~~i~~ 801 (991)
|..+++.+.+++| +.++++||+.||..|.+.|+ +++++| ++.+..+..||+++.+ +..+..
T Consensus 173 -~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~ad~v~~s--l~el~~ 241 (250)
T 3l5k_A 173 -DPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG-NLSRDLTTKATLVLNS--LQDFQP 241 (250)
T ss_dssp -STHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT-TSCGGGSTTSSEECSC--GGGCCG
T ss_pred -ChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC-CCchhhcccccEeecC--HHHhhH
Confidence 2233444433334 67999999999999999999 677777 5566678899999855 665543
|
| >2l1w_B Vacuolar calcium ATPase BCA1 peptide; calmodulin, calmodulin complex, soybean calmodulin, vacuolar ATPase, metal binding protein; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=97.89 E-value=1.8e-06 Score=55.85 Aligned_cols=25 Identities=60% Similarity=0.954 Sum_probs=23.0
Q ss_pred HHHHHHHhhcccccccccchhhhcc
Q 001960 21 ALQRWRKLCGFVKNRKRRFRFTANL 45 (991)
Q Consensus 21 ~~~~~~~~~~~~~~~~r~f~~~~~l 45 (991)
+++|||+|+++|+||+|||+++++|
T Consensus 1 al~rWR~a~~~v~n~~rrfr~~~~L 25 (26)
T 2l1w_B 1 ARQRWRSSVSIVKNRARRFRMISNL 25 (26)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHC
T ss_pred CchhHHHHHHHHhCccccccccccc
Confidence 4799999988999999999999987
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.88 E-value=2.6e-05 Score=81.26 Aligned_cols=120 Identities=11% Similarity=0.064 Sum_probs=86.5
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|+ .|+++.++|+.....+..+.+.+|+...-+.++.+.+.. . ...|.
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~--~kp~~ 165 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLG------------------V--LKPRP 165 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGTT------------------C--CTTSH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccCC------------------C--CCCCH
Confidence 46789999999999 999999999999999999999999864333333332211 1 11233
Q ss_pred HHHHHHHhhcC---CEEEEeCCCC-CChHhhhhCCeeEEecCCCcH-HHHhhcCEEeccCCchHHHHH
Q 001960 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAMGIAGTE-VAKESADVIILDDNFSTIVTV 802 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG~-ND~~al~~Advgiamg~~g~~-~ak~~ad~vl~~~~~~~i~~~ 802 (991)
..++.+.+++| +.++++||+. ||..|.+.|+++++|...+.. ..+..+|+++.+ +..+..+
T Consensus 166 ~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~s--l~e~~~~ 231 (240)
T 3qnm_A 166 EIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHS--LKELMNL 231 (240)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESS--THHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECC--HHHHHHH
Confidence 34444433334 5799999995 999999999999999855442 456679999965 7777654
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.87 E-value=4.2e-05 Score=79.62 Aligned_cols=122 Identities=11% Similarity=0.055 Sum_probs=86.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|++. +++.++|+.....+....+.+|+...-..++.+.+.. . ...|.
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~--~kp~~ 161 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTG------------------F--QKPMK 161 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTT------------------S--CTTCH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccC------------------C--CCCCh
Confidence 5678999999999999 9999999999999999999999864333333322211 1 11223
Q ss_pred HHHHHHHhhcC----CEEEEeCCCC-CChHhhhhCCeeEEecCCC--cHHHHhhcCEEeccCCchHHHHHHH
Q 001960 740 TLVKHLRTTLG----EVVAVTGDGT-NDAPALHEADIGLAMGIAG--TEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 740 ~~v~~l~~~~g----~~v~~iGDG~-ND~~al~~Advgiamg~~g--~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
..++.+.+++| +.++++||+. ||..|.+.|+++..+-..| .+..+..+|+++.+ +..+.+++.
T Consensus 162 ~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~--~~el~~~l~ 231 (238)
T 3ed5_A 162 EYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRK--LEELYHILN 231 (238)
T ss_dssp HHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESS--GGGHHHHHT
T ss_pred HHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECC--HHHHHHHHH
Confidence 44444444435 5699999998 9999999999964432243 44466789999965 888887764
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.83 E-value=2.2e-05 Score=82.55 Aligned_cols=120 Identities=15% Similarity=0.173 Sum_probs=81.7
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+. .-..++.+++. .+ +..|.
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~~~~~~~------------------~~--~Kp~p 168 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFALGEKSG------------------IR--RKPAP 168 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEEEEECTT------------------SC--CTTSS
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEEEecCCC------------------CC--CCCCH
Confidence 35689999999999999999999999988888888999975 33334433321 01 11222
Q ss_pred HHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCee---EEecCCCc-HHH-HhhcCEEeccCCchHHHHHH
Q 001960 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG---LAMGIAGT-EVA-KESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advg---iamg~~g~-~~a-k~~ad~vl~~~~~~~i~~~i 803 (991)
.+++.+.+++| +.++++||+.||..|.+.|++. +++| .+. +.. +..+|+++.+ +..+..++
T Consensus 169 ~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~-~~~~~~~~~~~a~~~~~~--~~el~~~l 237 (240)
T 2hi0_A 169 DMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWG-FRSVPFLQKHGATVIVDT--AEKLEEAI 237 (240)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSS-SSCHHHHHHTTCCCEECS--HHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCC-CCchhHHHhcCCCEEECC--HHHHHHHh
Confidence 33333322223 5699999999999999999984 5555 323 333 3468998854 77766544
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.83 E-value=3.5e-05 Score=79.69 Aligned_cols=117 Identities=11% Similarity=0.076 Sum_probs=83.1
Q ss_pred CCcccHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVAICRSAG-ITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aG-i~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
++.|++.+.++.|++.| +++.++|+........+.+.+|+...-.. +++...| |
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~-----------------------~~~~~kp--k 159 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDH-----------------------IEVMSDK--T 159 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSE-----------------------EEEESCC--S
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhhe-----------------------eeecCCC--C
Confidence 56789999999999999 99999999999888999999998542111 2232233 5
Q ss_pred HHHHHHHHhhcC---CEEEEeCCCC-CChHhhhhCCeeEEecC------CCcHHHHh-hcCEEeccCCchHHHHHH
Q 001960 739 HTLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAMGI------AGTEVAKE-SADVIILDDNFSTIVTVA 803 (991)
Q Consensus 739 ~~~v~~l~~~~g---~~v~~iGDG~-ND~~al~~Advgiamg~------~g~~~ak~-~ad~vl~~~~~~~i~~~i 803 (991)
...++.+.+++| +.++++||+. ||..|.+.|+++.++=. ++.+..+. .+|+++.+ +..+.+++
T Consensus 160 ~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~--l~el~~~l 233 (234)
T 3ddh_A 160 EKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKR--LDDLLSLL 233 (234)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSS--GGGHHHHC
T ss_pred HHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceeccc--HHHHHHhc
Confidence 555555555435 5689999996 99999999999988710 22222233 34888855 77777643
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=3.5e-05 Score=79.60 Aligned_cols=136 Identities=15% Similarity=0.116 Sum_probs=83.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCC---------------HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDN---------------INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~---------------~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~ 724 (991)
++.|++.++++.|+++|+++.++|+.. ...+..+.+++|+. -...+..+........ . .
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-f~~~~~~~~~~~~~~~----~-~ 123 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD-LDGIYYCPHHPQGSVE----E-F 123 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC-CSEEEEECCBTTCSSG----G-G
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc-eEEEEECCcCCCCccc----c-c
Confidence 788999999999999999999999999 46778888888885 2212222211000000 0 0
Q ss_pred cccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCe----eEEecCCCcHHHHhhcCEEeccCCchHHH
Q 001960 725 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI----GLAMGIAGTEVAKESADVIILDDNFSTIV 800 (991)
Q Consensus 725 ~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Adv----giamg~~g~~~ak~~ad~vl~~~~~~~i~ 800 (991)
........-.|+--..+.+.+.-. .+.++||||+.||..+.+.|++ ++..|....+.....+|+++.+ +..+.
T Consensus 124 ~~~~~~~KP~p~~~~~~~~~lgi~-~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~--l~el~ 200 (211)
T 2gmw_A 124 RQVCDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNS--LADLP 200 (211)
T ss_dssp BSCCSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESC--GGGHH
T ss_pred CccCcCCCCCHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCC--HHHHH
Confidence 000011122233223333333322 2568999999999999999995 4444422233344568999854 88887
Q ss_pred HHHH
Q 001960 801 TVAK 804 (991)
Q Consensus 801 ~~i~ 804 (991)
+++.
T Consensus 201 ~~l~ 204 (211)
T 2gmw_A 201 QAIK 204 (211)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.80 E-value=3e-05 Score=78.95 Aligned_cols=121 Identities=13% Similarity=0.089 Sum_probs=82.4
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+ ++.|++. +++.++|+.....+..+.+.+|+...-..++.+.+.. ...-.|+--.
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 135 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVK----------------EYKPSPKVYK 135 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGT----------------CCTTCHHHHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcC----------------CCCCCHHHHH
Confidence 46789999 9999999 9999999999999999999999864333333332211 0111222223
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecC---CCcHHHHhhcCEEeccCCchHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI---AGTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~---~g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
.+.+.+. .+.++++||+.||..|.+.|+++.++-. ++.+..+..+|+++.+ +..+.+++
T Consensus 136 ~~~~~~~---~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 197 (201)
T 2w43_A 136 YFLDSIG---AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVND--FKELYEWI 197 (201)
T ss_dssp HHHHHHT---CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESS--HHHHHHHH
T ss_pred HHHHhcC---CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECC--HHHHHHHH
Confidence 3333333 2568899999999999999999987721 2223334568998854 77777655
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.79 E-value=3.1e-05 Score=82.15 Aligned_cols=124 Identities=12% Similarity=0.119 Sum_probs=85.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|+ |+++.++|+.....+..+.+.+|+...-..++.+.+.. .....|.--.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 154 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKR----------------VFKPHPDSYA 154 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGT----------------CCTTSHHHHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccC----------------CCCCCHHHHH
Confidence 57899999999999 99999999999999999999999864323333332211 1112222223
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCC-----------------------C---cHHHHhhcCEEecc
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA-----------------------G---TEVAKESADVIILD 793 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~-----------------------g---~~~ak~~ad~vl~~ 793 (991)
.+.+.+.-. .+.++++||+.||..|.+.|+++.++... + .+..+..+|+++.+
T Consensus 155 ~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (253)
T 1qq5_A 155 LVEEVLGVT-PAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPA 233 (253)
T ss_dssp HHHHHHCCC-GGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESS
T ss_pred HHHHHcCCC-HHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCC
Confidence 333333222 25688999999999999999999988733 1 12234568998854
Q ss_pred CCchHHHHHHH
Q 001960 794 DNFSTIVTVAK 804 (991)
Q Consensus 794 ~~~~~i~~~i~ 804 (991)
+..+..++.
T Consensus 234 --~~el~~~l~ 242 (253)
T 1qq5_A 234 --LGDLPRLVR 242 (253)
T ss_dssp --GGGHHHHHH
T ss_pred --HHHHHHHHH
Confidence 888877653
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.79 E-value=4.4e-06 Score=85.68 Aligned_cols=121 Identities=12% Similarity=0.205 Sum_probs=80.2
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...-..++.+++.. ...-.|+--.
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~KP~~~~~~ 145 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTP----------------KRKPDPLPLL 145 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSS----------------CCTTSSHHHH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCC----------------CCCCCcHHHH
Confidence 4689999999999999 9999999999998999998888753212222222110 0011122223
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecC--C-CcHHHHhhcCEEeccCCchHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI--A-GTEVAKESADVIILDDNFSTIVT 801 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~--~-g~~~ak~~ad~vl~~~~~~~i~~ 801 (991)
.+.+.+.-. .+.++++||+.||.+|.+.|+++++|.. . ..+..++ +|+++.+ +..+.+
T Consensus 146 ~~~~~~~~~-~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~--~~el~~ 206 (209)
T 2hdo_A 146 TALEKVNVA-PQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQK--PLDILE 206 (209)
T ss_dssp HHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESS--GGGGGG
T ss_pred HHHHHcCCC-cccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCC--HHHHHH
Confidence 333333222 2568999999999999999999999742 1 2334445 9999854 655543
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.77 E-value=2.5e-05 Score=80.95 Aligned_cols=118 Identities=12% Similarity=0.179 Sum_probs=79.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhccccceEeccCh--h
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSP--M 736 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP--~ 736 (991)
++.|++.+.++.|+. ++.++|+........+.+.+|+...- ..++.++.. . .+ .
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~------------------~--~~~~k 143 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDL------------------G--ADRVK 143 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHH------------------C--TTCCT
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceEEecccc------------------c--cCCCC
Confidence 456788888887764 99999999999999999999986421 222222110 0 11 2
Q ss_pred hHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCee-EEecCCCcH-------HHHhh-cCEEeccCCchHHHHHH
Q 001960 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMGIAGTE-------VAKES-ADVIILDDNFSTIVTVA 803 (991)
Q Consensus 737 ~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advg-iamg~~g~~-------~ak~~-ad~vl~~~~~~~i~~~i 803 (991)
.|...++.+.+++| +.++++||+.||.+|++.|+++ ++++ ++.+ ..++. ||+++.+ +..+.+++
T Consensus 144 pk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~~l~~~~ad~v~~~--~~el~~~l 219 (229)
T 2fdr_A 144 PKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVISR--MQDLPAVI 219 (229)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHH
T ss_pred cCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEe-cCCccchhhhHHHhhcCCceeecC--HHHHHHHH
Confidence 23344444333324 5689999999999999999998 6676 5543 25566 9999854 77777655
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.75 E-value=3.6e-05 Score=79.14 Aligned_cols=117 Identities=16% Similarity=0.134 Sum_probs=83.7
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|++ |+++.++|+.....+..+.+.+|+...-..++ .+...+..|.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~----------------------~~~~~~Kp~p 140 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGIY----------------------GSSPEAPHKA 140 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEE----------------------EECSSCCSHH
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeeee----------------------cCCCCCCCCh
Confidence 467999999999999 99999999999888888889999864222221 1111223445
Q ss_pred HHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCe---eEEecCCC-cHHHH-hhcCEEeccCCchHHHHH
Q 001960 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAG-TEVAK-ESADVIILDDNFSTIVTV 802 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Adv---giamg~~g-~~~ak-~~ad~vl~~~~~~~i~~~ 802 (991)
.+.+.+.+++| +.++++||+.||+.|.++|++ ++++| .+ .+..+ ..+|+++.+ +..+..+
T Consensus 141 ~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~-~~~~~~l~~~~a~~v~~~--~~el~~~ 208 (210)
T 2ah5_A 141 DVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWG-FGEQADLLNYQPDYIAHK--PLEVLAY 208 (210)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS-SSCHHHHHTTCCSEEESS--TTHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEECC--HHHHHHH
Confidence 55555544435 569999999999999999998 77777 44 33333 368999865 6666543
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.73 E-value=4.7e-05 Score=76.42 Aligned_cols=106 Identities=16% Similarity=0.074 Sum_probs=71.6
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHH
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~ 740 (991)
+.|++.+.++.|++.|+++.++|+... .+..+.+.+|+...-..++.+++. .+..| |..
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~~------------------~~~kp--~~~ 141 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSG------------------FKRKP--NPE 141 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGC------------------CCCTT--SCH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeecccc------------------CCCCC--CHH
Confidence 579999999999999999999999874 567778888875422222222211 11112 233
Q ss_pred HHHHHHhhcCC-EEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcC
Q 001960 741 LVKHLRTTLGE-VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD 788 (991)
Q Consensus 741 ~v~~l~~~~g~-~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad 788 (991)
.++.+.+++|- .++++||+.||.+|++.|++++++. +.....++..+
T Consensus 142 ~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~l~ 189 (190)
T 2fi1_A 142 SMLYLREKYQISSGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHHTTCSSEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHT
T ss_pred HHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCeEEEE-CCCCChhhccC
Confidence 34444333242 6899999999999999999998886 44444455443
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.71 E-value=3.4e-05 Score=81.14 Aligned_cols=121 Identities=15% Similarity=0.189 Sum_probs=86.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.- ..++.++. +....| |.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f--~~~~~~~~------------------~~~~kp--~~ 172 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPW--DVIIGSDI------------------NRKYKP--DP 172 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCC--SCCCCHHH------------------HTCCTT--SH
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCe--eEEEEcCc------------------CCCCCC--CH
Confidence 5678999999999997 9999999999999999999999841 11111111 011122 23
Q ss_pred HHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCC----CcH----H-HHhhcCEEeccCCchHHHHHHHH
Q 001960 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIA----GTE----V-AKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~----g~~----~-ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
..++.+.+++| +.++++||+.||..|.+.|+++++|... |.. . .+..+|+++.+ +..+..++..
T Consensus 173 ~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~--~~el~~~l~~ 248 (254)
T 3umg_A 173 QAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATD--ITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESS--HHHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECC--HHHHHHHhcC
Confidence 44454444435 5799999999999999999999999742 211 1 35678999965 8888887643
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.67 E-value=3.6e-05 Score=82.88 Aligned_cols=116 Identities=14% Similarity=0.055 Sum_probs=78.8
Q ss_pred CCcccHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~a-Gi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
++.|++.+.++.|++. |+++.++|+.....+..+.+.+|+.. -..++.+++... ....|+--
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~-f~~i~~~~~~~~----------------~kp~~~~~ 176 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR-PEYFITANDVKQ----------------GKPHPEPY 176 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC-CSSEECGGGCSS----------------CTTSSHHH
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc-cCEEEEcccCCC----------------CCCChHHH
Confidence 3578999999999999 99999999999999999999988752 223343332110 11122322
Q ss_pred HHHHHHHHh-------hcCCEEEEeCCCCCChHhhhhCCeeEEe---cCCCcHHHHhhcCEEecc
Q 001960 739 HTLVKHLRT-------TLGEVVAVTGDGTNDAPALHEADIGLAM---GIAGTEVAKESADVIILD 793 (991)
Q Consensus 739 ~~~v~~l~~-------~~g~~v~~iGDG~ND~~al~~Advgiam---g~~g~~~ak~~ad~vl~~ 793 (991)
..+.+.+.- . .+.++++||+.||.+|++.|+++++| |.+..+..+..||+++.+
T Consensus 177 ~~~~~~lgi~~~~~~~~-~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 177 LKGRNGLGFPINEQDPS-KSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp HHHHHHTTCCCCSSCGG-GSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred HHHHHHcCCCccccCCC-cceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 334444433 3 35699999999999999999977665 523233333459998854
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00014 Score=73.66 Aligned_cols=137 Identities=10% Similarity=0.058 Sum_probs=89.7
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCH---HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccCh
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNI---NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~---~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (991)
-++.||+.++++.|+++|+++.++|+... ..+..+.+.+|+...-+.++...+... ..-...-.|
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~------------~~~~~KP~p 100 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQ------------PGKMEKPDK 100 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSS------------TTCCCTTSH
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEcccccc------------ccCCCCcCH
Confidence 46899999999999999999999998775 888999999998643223333322100 000112223
Q ss_pred hhHHHHHHHHHhhcCCEEEEeCCC-CCChHhhhhCCeeEEecCCCcHH-----H-HhhcCEEeccCCchHHHHHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLGEVVAVTGDG-TNDAPALHEADIGLAMGIAGTEV-----A-KESADVIILDDNFSTIVTVAKWGRS 808 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g~~v~~iGDG-~ND~~al~~Advgiamg~~g~~~-----a-k~~ad~vl~~~~~~~i~~~i~~gR~ 808 (991)
+--..+.+.+.-. .+.++||||+ .+|..+-+.|++....=..+... . ...+|+++.+.++..+.++++..+.
T Consensus 101 ~~~~~~~~~~~~~-~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~~~ 179 (189)
T 3ib6_A 101 TIFDFTLNALQID-KTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLKK 179 (189)
T ss_dssp HHHHHHHHHHTCC-GGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHcCCC-cccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHHHH
Confidence 3333344444322 3579999999 79999999999875432122211 1 1268999986679999988776543
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.64 E-value=3.5e-05 Score=81.28 Aligned_cols=120 Identities=13% Similarity=0.076 Sum_probs=84.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+. -..++.++. .. ....|.
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~--f~~~~~~~~------------------~~--~~kp~~ 176 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP--WDMLLCADL------------------FG--HYKPDP 176 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC--CSEECCHHH------------------HT--CCTTSH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC--cceEEeecc------------------cc--cCCCCH
Confidence 4578999999999985 999999999999999999999984 112222111 01 112233
Q ss_pred HHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecC----CCc---HH--HHhhcCEEeccCCchHHHHHHH
Q 001960 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGI----AGT---EV--AKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~----~g~---~~--ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
.+++.+.+++| +.++++||+.||..|.+.|+++++|.. .|. +. .+..+|+++.+ +..+.+++.
T Consensus 177 ~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~--l~el~~~l~ 251 (254)
T 3umc_A 177 QVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASD--LLDLHRQLA 251 (254)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESS--HHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECC--HHHHHHHhc
Confidence 44444433334 569999999999999999999999984 232 11 26679999965 888877653
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.64 E-value=3.5e-05 Score=82.37 Aligned_cols=125 Identities=10% Similarity=0.174 Sum_probs=85.2
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.++++.|++.|+++.++|+.... ...+.+.+|+...-..++.+.+. -.....|+--.
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~~~~~~----------------~~~Kp~~~~~~ 168 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVLTSEAA----------------GWPKPDPRIFQ 168 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEEEHHHH----------------SSCTTSHHHHH
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEEeeccc----------------CCCCCCHHHHH
Confidence 46799999999999999999999997664 67888889986432222222211 01122333333
Q ss_pred HHHHHHHhhcCCEEEEeCCCC-CChHhhhhCCeeEEecCCCcHH-----HHhhcCEEeccCCchHHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIGLAMGIAGTEV-----AKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~-ND~~al~~Advgiamg~~g~~~-----ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
.+.+.+.-. .+.++++||+. ||+.|.+.|+++.+|...+... ....+|+++.+ +..+.+++.
T Consensus 169 ~~~~~~g~~-~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~--l~el~~~l~ 236 (263)
T 3k1z_A 169 EALRLAHME-PVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPS--LAHLLPALD 236 (263)
T ss_dssp HHHHHHTCC-GGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESS--GGGHHHHHH
T ss_pred HHHHHcCCC-HHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCC--HHHHHHHHH
Confidence 444444322 36799999997 9999999999999987444321 12368999855 888887764
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.61 E-value=6.7e-05 Score=77.96 Aligned_cols=123 Identities=13% Similarity=0.148 Sum_probs=83.9
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|++ |+++.++|+..........+.++- .-+.++.+.+. -.....|.-..
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~--~fd~i~~~~~~----------------~~~KP~~~~~~ 159 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV--EFDHIITAQDV----------------GSYKPNPNNFT 159 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS--CCSEEEEHHHH----------------TSCTTSHHHHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC--ccCEEEEcccc----------------CCCCCCHHHHH
Confidence 678999999999999 899999999998877777665442 11223322211 11223444444
Q ss_pred HHHHHHHhhcC---CEEEEeCCCC-CChHhhhhCCeeEEecCCC----------cHHHHhhcCEEeccCCchHHHHHHH
Q 001960 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAMGIAG----------TEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG~-ND~~al~~Advgiamg~~g----------~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
..++.+++. | +.++++||+. ||..|.+.|+++++|...+ .+..+..+|+++.+ +..+.+++.
T Consensus 160 ~~l~~~~~l-gi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~--~~el~~~l~ 235 (240)
T 3smv_A 160 YMIDALAKA-GIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNS--MGEMAEAHK 235 (240)
T ss_dssp HHHHHHHHT-TCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESS--HHHHHHHHH
T ss_pred HHHHHHHhc-CCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCC--HHHHHHHHH
Confidence 554443332 4 5689999996 9999999999999995322 12345789999965 888877654
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.61 E-value=7e-05 Score=75.61 Aligned_cols=91 Identities=14% Similarity=0.109 Sum_probs=66.8
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhh
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~-~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 737 (991)
-++.|++.++++.|++.|+++.++||.. ...+..+.+.+|+...-+. ++. .+..
T Consensus 67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~-----------------------~~~--~~~~ 121 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVH-----------------------REI--YPGS 121 (187)
T ss_dssp ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEE-----------------------EEE--SSSC
T ss_pred cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcce-----------------------eEE--EeCc
Confidence 3678999999999999999999999999 7899999999998642100 111 1123
Q ss_pred HHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEE
Q 001960 738 KHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 774 (991)
Q Consensus 738 K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgia 774 (991)
|....+.+.+++| +.++++||+.+|+.+.++|++...
T Consensus 122 k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 122 KITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred hHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 4444443333324 568999999999999999987643
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00044 Score=72.85 Aligned_cols=118 Identities=14% Similarity=0.106 Sum_probs=79.9
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccCh--hh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--MD 737 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP--~~ 737 (991)
++.|++.+.++.|+ .|+++.++|+.....+....+.+|+...-.. +++...| +-
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~-----------------------i~~~~kp~~~~ 167 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPR-----------------------IEVVSEKDPQT 167 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCC-----------------------EEEESCCSHHH
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCce-----------------------eeeeCCCCHHH
Confidence 45799999999999 9999999999999888888888888542111 2222223 22
Q ss_pred HHHHHHHHHhhcCCEEEEeCCCC-CChHhhhhCCeeEEecCCCcH--------HHHhhcCE-EeccCCchHHHHHHH
Q 001960 738 KHTLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIGLAMGIAGTE--------VAKESADV-IILDDNFSTIVTVAK 804 (991)
Q Consensus 738 K~~~v~~l~~~~g~~v~~iGDG~-ND~~al~~Advgiamg~~g~~--------~ak~~ad~-vl~~~~~~~i~~~i~ 804 (991)
-..+.+.+.-. .+.++++||+. ||..|.+.|++++++=..|.. .....+|+ ++.+ +..+..++.
T Consensus 168 ~~~~~~~l~~~-~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~~l~ 241 (251)
T 2pke_A 168 YARVLSEFDLP-AERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPD--PSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHTCC-GGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSS--GGGHHHHHH
T ss_pred HHHHHHHhCcC-chhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCC--HHHHHHHHH
Confidence 22333333222 25789999999 999999999999876323321 11345787 7744 888877653
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00043 Score=71.07 Aligned_cols=124 Identities=19% Similarity=0.233 Sum_probs=81.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|++.|+++.++|+.+...+....+.+|+...-+.++.+.+.. ...-.|+-=.
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~----------------~~KP~p~~~~ 147 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVK----------------NGKPDPEIYL 147 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSS----------------SCTTSTHHHH
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccC----------------CCcccHHHHH
Confidence 357899999999999999999999999999999999999975433344333211 1122233223
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee----EEecCCCcHHHHhh-cCEEeccCCchHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG----LAMGIAGTEVAKES-ADVIILDDNFSTIVTVA 803 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg----iamg~~g~~~ak~~-ad~vl~~~~~~~i~~~i 803 (991)
.+.+.+.-. .+.++||||..+|+.+-++|++. +.-|.+..+..+++ ++.+. + ...+.+.+
T Consensus 148 ~a~~~lg~~-p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~-~--~~eli~~l 212 (216)
T 3kbb_A 148 LVLERLNVV-PEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV-K--PEEILNVL 212 (216)
T ss_dssp HHHHHHTCC-GGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE-C--GGGHHHHH
T ss_pred HHHHhhCCC-ccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC-C--HHHHHHHH
Confidence 333444322 35689999999999999999974 33343334444444 44444 3 45555544
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00017 Score=72.98 Aligned_cols=102 Identities=9% Similarity=0.003 Sum_probs=70.8
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|++.| ++.++|+.....+..+.+.+|+...-+.++.+.+. -.....|+--.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~----------------~~~Kp~~~~~~ 148 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSAL----------------GVMKPNPAMYR 148 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHH----------------SCCTTCHHHHH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEEeeccc----------------CCCCCCHHHHH
Confidence 36799999999999999 99999999999999999999986432222222111 01122333323
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCC
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g 779 (991)
.+.+.+.-. .+.++++||+.||..|.+.|++...+-..+
T Consensus 149 ~~~~~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 187 (200)
T 3cnh_A 149 LGLTLAQVR-PEEAVMVDDRLQNVQAARAVGMHAVQCVDA 187 (200)
T ss_dssp HHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEECSCH
T ss_pred HHHHHcCCC-HHHeEEeCCCHHHHHHHHHCCCEEEEECCc
Confidence 333333322 356899999999999999999998775333
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.27 E-value=8e-05 Score=76.16 Aligned_cols=102 Identities=6% Similarity=-0.052 Sum_probs=68.5
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH------cCCccCCceeeeCcccccCCHHHHhhhccccceEecc
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE------CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~------~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (991)
++.|++.+.++.|++ |+++.++|+.....+..+.+. .|+...-+.++.+.+. -....
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~----------------~~~Kp 151 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQM----------------GKYKP 151 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHH----------------TCCTT
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeeccc----------------CCCCC
Confidence 467899999999999 999999999998888877776 6764322222222110 01112
Q ss_pred ChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCC
Q 001960 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779 (991)
Q Consensus 734 sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g 779 (991)
.|+--..+.+.+.-. .+.++++||+.||..|.+.|+++.+|...+
T Consensus 152 ~~~~~~~~~~~~~~~-~~~~~~igD~~~Di~~a~~aG~~~~~~~~~ 196 (211)
T 2i6x_A 152 NEDIFLEMIADSGMK-PEETLFIDDGPANVATAERLGFHTYCPDNG 196 (211)
T ss_dssp SHHHHHHHHHHHCCC-GGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred CHHHHHHHHHHhCCC-hHHeEEeCCCHHHHHHHHHcCCEEEEECCH
Confidence 222223333333322 356899999999999999999999887443
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00037 Score=73.72 Aligned_cols=37 Identities=19% Similarity=0.263 Sum_probs=31.8
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGI 699 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi 699 (991)
++-+.+.++|++|+++|++++++||+.... +.+.++.
T Consensus 21 ~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~---~~~~l~~ 57 (246)
T 3f9r_A 21 CQTDEMRALIKRARGAGFCVGTVGGSDFAK---QVEQLGR 57 (246)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHCT
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHHhhh
Confidence 577889999999999999999999999884 4566664
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00039 Score=74.22 Aligned_cols=44 Identities=16% Similarity=0.103 Sum_probs=36.9
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCcc
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILT 701 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTG---D~~~ta~~ia~~~gi~~ 701 (991)
.+.+-|+++++|++++++|++++++|| +.........+++|+..
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~ 68 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEV 68 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCC
Confidence 444567899999999999999999999 67777777778888853
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0011 Score=70.63 Aligned_cols=124 Identities=12% Similarity=0.133 Sum_probs=82.9
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|++ |+++.++|+.....+..+.+.+|+...-+.++.+.+.. ...-.|+--.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~~----------------~~KP~p~~~~ 183 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQK----------------EEKPAPSIFY 183 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSS----------------SCTTCHHHHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCCC----------------CCCCCHHHHH
Confidence 567999999999998 69999999999999999999999864333333333211 1112232223
Q ss_pred HHHHHHHhhcCCEEEEeCCC-CCChHhhhhCCe--eEEecCCCcH--HHHhhcCEEeccCCchHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDG-TNDAPALHEADI--GLAMGIAGTE--VAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG-~ND~~al~~Adv--giamg~~g~~--~ak~~ad~vl~~~~~~~i~~~i 803 (991)
.+.+.+.-. .+.++||||+ .||+.+-+.|++ .+.++..+.+ .....+|+++.+ +..+..++
T Consensus 184 ~~~~~~~~~-~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~--~~el~~~l 249 (260)
T 2gfh_A 184 HCCDLLGVQ-PGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSS--VLELPALL 249 (260)
T ss_dssp HHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESS--GGGHHHHH
T ss_pred HHHHHcCCC-hhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECC--HHHHHHHH
Confidence 333333322 3568999995 999999999999 5777522211 123468888855 77777655
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0006 Score=70.40 Aligned_cols=119 Identities=15% Similarity=0.232 Sum_probs=74.2
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|++. +++.++|+.... .+.+|+...-+.++.+.+. -.....|+--.
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~----------------~~~kp~~~~~~ 162 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAFALCAEDL----------------GIGKPDPAPFL 162 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHH----------------TCCTTSHHHHH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeeeeEEcccc----------------CCCCcCHHHHH
Confidence 4678999999999998 999999987754 2445554221122211110 00111222222
Q ss_pred HHHHHHHhhcCCEEEEeCCCC-CChHhhhhCCeeEEe---cCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIGLAM---GIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~-ND~~al~~Advgiam---g~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
.+.+.+.-. .+.++++||+. ||..|.+.|+++.++ |....+. +..+|+++.+ +..+.+++.
T Consensus 163 ~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~~--l~el~~~l~ 227 (230)
T 3vay_A 163 EALRRAKVD-ASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIHN--LSQLPEVLA 227 (230)
T ss_dssp HHHHHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEESS--GGGHHHHHH
T ss_pred HHHHHhCCC-chheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeECC--HHHHHHHHH
Confidence 333333222 25689999998 999999999998887 2122222 6678999965 888887663
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00014 Score=68.70 Aligned_cols=98 Identities=11% Similarity=0.040 Sum_probs=65.6
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
.++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...-+.++.+.+. -.....|+--
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~----------------~~~Kp~~~~~ 80 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGEL----------------GVEKPEEAAF 80 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHH----------------SCCTTSHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccC----------------CCCCCCHHHH
Confidence 357789999999999999999999999988888888888875432222222110 0111222222
Q ss_pred HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeE
Q 001960 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 739 ~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgi 773 (991)
..+.+.+.-. .+.++++||+.+|..+.++|++..
T Consensus 81 ~~~~~~~~~~-~~~~~~vgD~~~di~~a~~~G~~~ 114 (137)
T 2pr7_A 81 QAAADAIDLP-MRDCVLVDDSILNVRGAVEAGLVG 114 (137)
T ss_dssp HHHHHHTTCC-GGGEEEEESCHHHHHHHHHHTCEE
T ss_pred HHHHHHcCCC-cccEEEEcCCHHHHHHHHHCCCEE
Confidence 2233333222 246899999999999999999753
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0015 Score=69.62 Aligned_cols=43 Identities=14% Similarity=0.037 Sum_probs=36.4
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCcc
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILT 701 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTG---D~~~ta~~ia~~~gi~~ 701 (991)
+.+-|+++++|++++++|++++++|| +.........+++|+..
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 34557899999999999999999988 77777888888888854
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00016 Score=74.93 Aligned_cols=133 Identities=17% Similarity=0.137 Sum_probs=76.0
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeeeCccc-ccCCHHHHh
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEF-REKSDEELS 721 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~---------------~ta~~ia~~~gi~~~~~~vi~g~~~-~~~~~~~~~ 721 (991)
+.++.|++.++++.|+++|+++.++|+... ..+..+.+++|+.-+ ......... ..+.
T Consensus 54 ~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-~~~~~~~~~~g~~~----- 127 (218)
T 2o2x_A 54 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD-MVLACAYHEAGVGP----- 127 (218)
T ss_dssp GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS-EEEEECCCTTCCST-----
T ss_pred cCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCcee-eEEEeecCCCCcee-----
Confidence 357889999999999999999999999987 677888888887411 111110000 0000
Q ss_pred hhccccceEeccChhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeE-EecCCCc---HHHHhhcCEEeccC
Q 001960 722 KLIPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL-AMGIAGT---EVAKESADVIILDD 794 (991)
Q Consensus 722 ~~~~~~~v~ar~sP~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgi-amg~~g~---~~ak~~ad~vl~~~ 794 (991)
+.... + ....| |..+.+.+.+++| +.++||||+.||..+.+.|++.. .+-..|. +.....+|+++.+
T Consensus 128 ~~~~~--~-~~~KP--~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~- 201 (218)
T 2o2x_A 128 LAIPD--H-PMRKP--NPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSE- 201 (218)
T ss_dssp TCCSS--C-TTSTT--SCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHH-
T ss_pred ecccC--C-ccCCC--CHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEeccc-
Confidence 00000 0 01112 2223333322223 56899999999999999999764 3211222 1112345655543
Q ss_pred CchHHHHHH
Q 001960 795 NFSTIVTVA 803 (991)
Q Consensus 795 ~~~~i~~~i 803 (991)
+..+.+++
T Consensus 202 -l~el~~~l 209 (218)
T 2o2x_A 202 -LGDLLAAI 209 (218)
T ss_dssp -HHHHHHHH
T ss_pred -HHHHHHHH
Confidence 55555544
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00082 Score=75.61 Aligned_cols=137 Identities=15% Similarity=0.170 Sum_probs=84.0
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeeeCcccccCCHHHHhhhccccceEeccChh
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~--~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (991)
-++.||+.+.++.|+++|+++.++|+.....+..+.+..|+...-. .++.+++... ..+..+...-...-.|+
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~-----~~~~~~~~kp~~KP~P~ 288 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLE-----AENMYPQARPLGKPNPF 288 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHH-----HHHHSTTSCCCCTTSTH
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccc-----cccccccccCCCCCCHH
Confidence 3688999999999999999999999999999999999999864322 3444332110 00000000001122222
Q ss_pred hHHHHHHHHH---------h----hcCCEEEEeCCCCCChHhhhhCCeeE-EecCCCc-------HHHHhhcCEEeccCC
Q 001960 737 DKHTLVKHLR---------T----TLGEVVAVTGDGTNDAPALHEADIGL-AMGIAGT-------EVAKESADVIILDDN 795 (991)
Q Consensus 737 ~K~~~v~~l~---------~----~~g~~v~~iGDG~ND~~al~~Advgi-amg~~g~-------~~ak~~ad~vl~~~~ 795 (991)
-=....+.+. + -..+.++||||+.+|+.+-++|++.. .+. .|. +.....||+++.+
T Consensus 289 ~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~-~g~~~~~~~~~l~~~~ad~vi~s-- 365 (384)
T 1qyi_A 289 SYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL-TGLKGKDAAGELEAHHADYVINH-- 365 (384)
T ss_dssp HHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEES-CBTTBGGGHHHHHHTTCSEEESS--
T ss_pred HHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEEC-CCccccccHHHHhhcCCCEEECC--
Confidence 2112222211 0 00256899999999999999999763 333 221 2223468999865
Q ss_pred chHHHHHH
Q 001960 796 FSTIVTVA 803 (991)
Q Consensus 796 ~~~i~~~i 803 (991)
+..+..++
T Consensus 366 l~eL~~~l 373 (384)
T 1qyi_A 366 LGELRGVL 373 (384)
T ss_dssp GGGHHHHH
T ss_pred HHHHHHHH
Confidence 88877665
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.91 E-value=9.8e-05 Score=75.09 Aligned_cols=105 Identities=12% Similarity=0.069 Sum_probs=63.5
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~-~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
++.|++.+.++.|++.|+++.++|+........+... .|+...-+.++.+.+. -...-.|+--
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~----------------~~~Kp~~~~~ 154 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDL----------------GMRKPEARIY 154 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHH----------------TCCTTCHHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEeccc----------------CCCCCCHHHH
Confidence 5679999999999999999999999765443332222 2322110111111110 0011223233
Q ss_pred HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcH
Q 001960 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 781 (991)
Q Consensus 739 ~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~ 781 (991)
..+.+.+.-. .+.++++||+.||..|.+.|++...+...+.+
T Consensus 155 ~~~~~~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~ 196 (206)
T 2b0c_A 155 QHVLQAEGFS-PSDTVFFDDNADNIEGANQLGITSILVKDKTT 196 (206)
T ss_dssp HHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEECCSTTH
T ss_pred HHHHHHcCCC-HHHeEEeCCCHHHHHHHHHcCCeEEEecCCch
Confidence 3344444322 35689999999999999999999887644444
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.00028 Score=75.39 Aligned_cols=58 Identities=14% Similarity=0.276 Sum_probs=48.8
Q ss_pred hhHHHHHHHHHhh-cCCEEEEeCC----CCCChHhhhhCC-eeEEecCCCcHHHHhhcCEEeccCC
Q 001960 736 MDKHTLVKHLRTT-LGEVVAVTGD----GTNDAPALHEAD-IGLAMGIAGTEVAKESADVIILDDN 795 (991)
Q Consensus 736 ~~K~~~v~~l~~~-~g~~v~~iGD----G~ND~~al~~Ad-vgiamg~~g~~~ak~~ad~vl~~~~ 795 (991)
.+|...++.| .. ..+.|+++|| |.||.+||+.|+ +|++|| ++.+..|+.||+++.+++
T Consensus 196 vsKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 196 WDKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPETA 259 (262)
T ss_dssp CSTTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTTC-
T ss_pred CCHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCCCc
Confidence 5788888888 22 1267999999 999999999999 699998 999999999999886654
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0024 Score=68.02 Aligned_cols=43 Identities=16% Similarity=0.153 Sum_probs=38.1
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCcc
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGILT 701 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlT---GD~~~ta~~ia~~~gi~~ 701 (991)
+++-+++.+++++|+++|++++++| |+.........+++|+..
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 5667899999999999999999999 889888888888888853
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.69 E-value=0.00069 Score=70.31 Aligned_cols=103 Identities=14% Similarity=0.032 Sum_probs=67.4
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH------HHcCCccCCceeeeCcccccCCHHHHhhhccccceEecc
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA------RECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia------~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (991)
++.|++.+.++.|++. +++.++|+.....+..+. +..|+...-+.++.+.+. -....
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~----------------~~~KP 174 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEM----------------KMAKP 174 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHH----------------TCCTT
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeeccc----------------CCCCC
Confidence 3569999999999999 999999999998888666 344543211112111110 01122
Q ss_pred ChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCc
Q 001960 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780 (991)
Q Consensus 734 sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~ 780 (991)
.|+--..+.+.+.-. .+.++++||+.||+.|.+.|+++.++...+.
T Consensus 175 ~~~~~~~~~~~~g~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~ 220 (229)
T 4dcc_A 175 EPEIFKAVTEDAGID-PKETFFIDDSEINCKVAQELGISTYTPKAGE 220 (229)
T ss_dssp CHHHHHHHHHHHTCC-GGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred CHHHHHHHHHHcCCC-HHHeEEECCCHHHHHHHHHcCCEEEEECCHH
Confidence 233333344444322 3678999999999999999999998874443
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.019 Score=60.51 Aligned_cols=40 Identities=20% Similarity=0.187 Sum_probs=35.9
Q ss_pred CcccHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCc
Q 001960 661 MRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGIL 700 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlT---GD~~~ta~~ia~~~gi~ 700 (991)
+-++..++++.+++.|+++.++| |..........+++|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 55788999999999999999999 99999888888888875
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.60 E-value=0.00028 Score=74.55 Aligned_cols=53 Identities=19% Similarity=0.286 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHhh-cCCEEEEeCC----CCCChHhhhhCCe-eEEecCCCcHHHHhhcCEE
Q 001960 736 MDKHTLVKHLRTT-LGEVVAVTGD----GTNDAPALHEADI-GLAMGIAGTEVAKESADVI 790 (991)
Q Consensus 736 ~~K~~~v~~l~~~-~g~~v~~iGD----G~ND~~al~~Adv-giamg~~g~~~ak~~ad~v 790 (991)
.+|...++.+ .. ..+.|+++|| |.||.+||+.|+. |++|| ++.+..|+.||+|
T Consensus 187 ~~Kg~al~~l-~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v 245 (246)
T 2amy_A 187 WDKRYCLRHV-ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLF 245 (246)
T ss_dssp CSGGGGGGGT-TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHC
T ss_pred CchHHHHHHH-hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhc
Confidence 4788888877 21 1268999999 9999999999987 99999 9999999999986
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0043 Score=62.99 Aligned_cols=118 Identities=11% Similarity=0.107 Sum_probs=73.9
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.++++.|+++|+++.++||.....+..+.. .. .+.++.+.+. .+..|.- .
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~--~d~v~~~~~~------------------~~~KP~p-~ 91 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PV--NDWMIAAPRP------------------TAGWPQP-D 91 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TT--TTTCEECCCC------------------SSCTTST-H
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---cc--CCEEEECCcC------------------CCCCCCh-H
Confidence 678999999999999999999999999887755443 11 1122322221 1112211 2
Q ss_pred HHHHHHHhh---cCCEEEEeCCCCCChHhhhhCCee-EEecCCCc---------------------------HHHHhhcC
Q 001960 740 TLVKHLRTT---LGEVVAVTGDGTNDAPALHEADIG-LAMGIAGT---------------------------EVAKESAD 788 (991)
Q Consensus 740 ~~v~~l~~~---~g~~v~~iGDG~ND~~al~~Advg-iamg~~g~---------------------------~~ak~~ad 788 (991)
-+.+.+++. ..+.++||||..+|+.+-++|++- |.+. .|. +.....+|
T Consensus 92 ~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~-~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d 170 (196)
T 2oda_A 92 ACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA-SCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVH 170 (196)
T ss_dssp HHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEES-SSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEc-cCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCC
Confidence 223333332 124689999999999999999963 4333 221 01123589
Q ss_pred EEeccCCchHHHHHHH
Q 001960 789 VIILDDNFSTIVTVAK 804 (991)
Q Consensus 789 ~vl~~~~~~~i~~~i~ 804 (991)
+++.+ +..+..++.
T Consensus 171 ~vi~~--~~eL~~~l~ 184 (196)
T 2oda_A 171 SVIDH--LGELESCLA 184 (196)
T ss_dssp EEESS--GGGHHHHHH
T ss_pred EEeCC--HHHHHHHHH
Confidence 99854 888877653
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0019 Score=68.15 Aligned_cols=86 Identities=17% Similarity=0.174 Sum_probs=65.8
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCH----HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEecc
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNI----NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~----~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (991)
+.++.|++.+.++.|+++|+++.++||... ..+..-.+++||..... -.++-|.
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~----------------------~~Lilr~ 156 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND----------------------KTLLLKK 156 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST----------------------TTEEEES
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc----------------------ceeEecC
Confidence 467889999999999999999999999965 47777778899964210 0033333
Q ss_pred ChhhHHHHHHHHHhhcCCEEEEeCCCCCChHh
Q 001960 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPA 765 (991)
Q Consensus 734 sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~a 765 (991)
....|....+.+.+.--.+|+++||..+|.++
T Consensus 157 ~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 157 DKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp SCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred CCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 34678888888887513679999999999987
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0015 Score=69.04 Aligned_cols=85 Identities=18% Similarity=0.137 Sum_probs=64.7
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCH----HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEecc
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNI----NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~----~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (991)
++++.|++.+.++.|+++|+++.++||... ..+..-.+++||..-.. -.++-|.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~----------------------~~Lilr~ 156 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE----------------------SAFYLKK 156 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG----------------------GGEEEES
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc----------------------cceeccC
Confidence 567889999999999999999999999865 46777778899964110 0033333
Q ss_pred ChhhHHHHHHHHHhhcC-CEEEEeCCCCCChHh
Q 001960 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPA 765 (991)
Q Consensus 734 sP~~K~~~v~~l~~~~g-~~v~~iGDG~ND~~a 765 (991)
.-..|....+.+.+. | .+|+++||..+|.++
T Consensus 157 ~~~~K~~~r~~l~~~-Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 157 DKSAKAARFAEIEKQ-GYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp SCSCCHHHHHHHHHT-TEEEEEEEESSGGGGCS
T ss_pred CCCChHHHHHHHHhc-CCCEEEEECCChHHhcc
Confidence 335677777888776 5 579999999999986
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.004 Score=65.67 Aligned_cols=117 Identities=13% Similarity=0.210 Sum_probs=78.4
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
.++.|++.+.++.|++.|+++.+.|+.. .+..+.+.+|+...-+.++.+++.. ...-.|+-=
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~i~~~~~~~----------------~~KP~p~~~ 176 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDFIADAGKCK----------------NNKPHPEIF 176 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSEECCGGGCC----------------SCTTSSHHH
T ss_pred cccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccceeecccccC----------------CCCCcHHHH
Confidence 4578999999999999999999877654 3566778899875444444444321 112233333
Q ss_pred HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCe-eEEecCCCcHHHHhhcCEEeccCCchHH
Q 001960 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMGIAGTEVAKESADVIILDDNFSTI 799 (991)
Q Consensus 739 ~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Adv-giamg~~g~~~ak~~ad~vl~~~~~~~i 799 (991)
..+.+.+.-. .+.++||||..+|..+-++|++ .|+++ +..+ ...||+++.+ +..+
T Consensus 177 ~~a~~~lg~~-p~e~l~VGDs~~Di~aA~~aG~~~i~v~-~~~~--~~~ad~vi~~--l~eL 232 (250)
T 4gib_A 177 LMSAKGLNVN-PQNCIGIEDASAGIDAINSANMFSVGVG-NYEN--LKKANLVVDS--TNQL 232 (250)
T ss_dssp HHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEES-CTTT--TTTSSEEESS--GGGC
T ss_pred HHHHHHhCCC-hHHeEEECCCHHHHHHHHHcCCEEEEEC-ChhH--hccCCEEECC--hHhC
Confidence 4444444333 3568999999999999999997 45454 3222 3458999855 6655
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0052 Score=61.61 Aligned_cols=32 Identities=16% Similarity=0.273 Sum_probs=23.9
Q ss_pred HHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCC
Q 001960 613 NETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660 (991)
Q Consensus 613 ~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~ 660 (991)
.+.+.++..+|..++.+| .|..++|++++.|+
T Consensus 154 ~~~~~~~~~~G~T~V~va----------------idg~l~g~iavaD~ 185 (185)
T 2kmv_A 154 NDFMTEHERKGRTAVLVA----------------VDDELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHTTCEEEEEE----------------ETTEEEEEEEEECC
T ss_pred HHHHHHHHhCCCeEEEEE----------------ECCEEEEEEEEEcC
Confidence 344566777887777777 35679999999995
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0073 Score=62.65 Aligned_cols=38 Identities=16% Similarity=0.193 Sum_probs=31.6
Q ss_pred ccHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCc
Q 001960 663 PGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGIL 700 (991)
Q Consensus 663 ~~v~~~I~~l~~aGi~v~mlT---GD~~~ta~~ia~~~gi~ 700 (991)
+++.++++.+++.|+++..+| |...........+.|+.
T Consensus 22 ~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~ 62 (250)
T 2c4n_A 22 PGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred cCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 445889999999999999999 88888777777777764
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=96.24 E-value=0.0073 Score=64.15 Aligned_cols=43 Identities=16% Similarity=0.236 Sum_probs=37.7
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCccC
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGILTD 702 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlT---GD~~~ta~~ia~~~gi~~~ 702 (991)
.++ |+++++|++++++|++++++| |+.........+++|+...
T Consensus 21 ~~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 21 SRI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp EEC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred EEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 355 899999999999999999999 8888888888889998543
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.0055 Score=62.97 Aligned_cols=94 Identities=13% Similarity=0.080 Sum_probs=61.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|+++|+++.++|+... .+..+.+.+|+...-+.++.+.+.. ...-.|+--.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 157 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIK----------------AVKPNPKIFG 157 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC---------------------------CCHHH
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccC----------------CCCCCHHHHH
Confidence 4679999999999999999999999866 4788888899864322233222210 1111222222
Q ss_pred HHHHHHHhhcC-CEEEEeCCCCC-ChHhhhhCCeeEEe
Q 001960 740 TLVKHLRTTLG-EVVAVTGDGTN-DAPALHEADIGLAM 775 (991)
Q Consensus 740 ~~v~~l~~~~g-~~v~~iGDG~N-D~~al~~Advgiam 775 (991)
.+ +++. | .. +++||+.+ |..+-+.|++....
T Consensus 158 ~~---~~~~-~~~~-~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 158 FA---LAKV-GYPA-VHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp HH---HHHH-CSSE-EEEESSCCCCCCCSSSCSEEEEE
T ss_pred HH---HHHc-CCCe-EEEcCCchHhHHHHHHCCCeEEE
Confidence 22 3332 4 23 99999999 99999999987553
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=96.04 E-value=0.004 Score=67.70 Aligned_cols=97 Identities=15% Similarity=0.114 Sum_probs=68.5
Q ss_pred ccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHH--------cCCccCCceeeeCcccccCCHHHHhhhcc
Q 001960 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTA---KAIARE--------CGILTDNGIAIEGPEFREKSDEELSKLIP 725 (991)
Q Consensus 657 i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta---~~ia~~--------~gi~~~~~~vi~g~~~~~~~~~~~~~~~~ 725 (991)
.++++.||+.++++.|+++|+++.++||.....+ ...-+. .|+. ...++.+.+.
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~------------- 249 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP--LVMQCQREQG------------- 249 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC--CSEEEECCTT-------------
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC--chheeeccCC-------------
Confidence 4678899999999999999999999999985432 333444 6872 2233333221
Q ss_pred ccceEeccChhhHHHHHHHHHhhcC-CEEEEeCCCCCChHhhhhCCeeE
Q 001960 726 KIQVMARSSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 726 ~~~v~ar~sP~~K~~~v~~l~~~~g-~~v~~iGDG~ND~~al~~Advgi 773 (991)
-.+-.|+-|..+.+.+... . +.++|+||..+|+.|-++|++-.
T Consensus 250 ----~~kp~p~~~~~~~~~~~~~-~~~~~~~vgD~~~di~~a~~aG~~~ 293 (301)
T 1ltq_A 250 ----DTRKDDVVKEEIFWKHIAP-HFDVKLAIDDRTQVVEMWRRIGVEC 293 (301)
T ss_dssp ----CCSCHHHHHHHHHHHHTTT-TCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred ----CCcHHHHHHHHHHHHHhcc-ccceEEEeCCcHHHHHHHHHcCCeE
Confidence 1233467777777777433 3 34688999999999999999753
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=95.42 E-value=0.0029 Score=62.99 Aligned_cols=97 Identities=18% Similarity=0.132 Sum_probs=61.5
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCceeeeC----cccccCCHHH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAIEG----PEFREKSDEE 719 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD---------------~~~ta~~ia~~~gi~~~~~~vi~g----~~~~~~~~~~ 719 (991)
-++.|++.++++.|++.|+++.++|+- ....+..+.+.+|+. -+..++++ .+..
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-fd~v~~s~~~~~~~~~------ 113 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ-FDEVLICPHLPADECD------ 113 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC-EEEEEEECCCGGGCCS------
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC-eeEEEEcCCCCccccc------
Confidence 367899999999999999999999998 466788888889985 11122221 1100
Q ss_pred HhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeE
Q 001960 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 720 ~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgi 773 (991)
...-.|+-=..+.+.+.-. .+.++||||+.+|..+-+.|++..
T Consensus 114 ----------~~KP~p~~~~~~~~~~gi~-~~~~l~VGD~~~Di~~A~~aG~~~ 156 (176)
T 2fpr_A 114 ----------CRKPKVKLVERYLAEQAMD-RANSYVIGDRATDIQLAENMGING 156 (176)
T ss_dssp ----------SSTTSCGGGGGGC----CC-GGGCEEEESSHHHHHHHHHHTSEE
T ss_pred ----------ccCCCHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHcCCeE
Confidence 0001111001111222212 245889999999999999999863
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.40 E-value=0.015 Score=60.21 Aligned_cols=116 Identities=11% Similarity=0.181 Sum_probs=73.5
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
-++.||+.+.++.|++.| ++.++|+.....+..+.+.+|+... +... +... ..|
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~---------------------f~~~-~~~~---~~K 148 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDE---------------------VEGR-VLIY---IHK 148 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHH---------------------TTTC-EEEE---SSG
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHh---------------------cCee-EEec---CCh
Confidence 367899999999999999 9999999999889999999987521 0000 1111 122
Q ss_pred HHHHHHHHhh-cCCEEEEeCCCCC---ChHhhhhCCee-EEecCCC----c-HHHHh--hcCEEeccCCchHHHHHH
Q 001960 739 HTLVKHLRTT-LGEVVAVTGDGTN---DAPALHEADIG-LAMGIAG----T-EVAKE--SADVIILDDNFSTIVTVA 803 (991)
Q Consensus 739 ~~~v~~l~~~-~g~~v~~iGDG~N---D~~al~~Advg-iamg~~g----~-~~ak~--~ad~vl~~~~~~~i~~~i 803 (991)
...++.+.+. ..+.++++||+.| |..+-+.|++. +.+. .| . +..++ .+|+++.+ +..+.+++
T Consensus 149 ~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~-~g~~~~~~~~l~~~~~~~~~i~~--~~el~~~l 222 (231)
T 2p11_A 149 ELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPR-QGHYAFDPKEISSHPPADVTVER--IGDLVEMD 222 (231)
T ss_dssp GGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEEC-CSSSSSCHHHHHHSCCCSEEESS--GGGGGGCG
T ss_pred HHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeC-CCCCCCcchhccccCCCceeecC--HHHHHHHH
Confidence 2233333322 1468999999999 55555667754 2222 22 2 22333 38998854 66665443
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=95.19 E-value=0.019 Score=60.92 Aligned_cols=84 Identities=17% Similarity=0.300 Sum_probs=56.1
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHcCCc--cCCceeeeCcccccCCHHHHhhhccccceEecc
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDN---INTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~---~~ta~~ia~~~gi~--~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (991)
.++.|++.++++.|++.|+++.++||.. ...+....+.+|+. ....+++.+++. .
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~--------------------~ 159 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE--------------------K 159 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC--------------------C
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC--------------------C
Confidence 4677999999999999999999999998 44555566778986 333344444321 0
Q ss_pred ChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhh
Q 001960 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766 (991)
Q Consensus 734 sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al 766 (991)
.|.-...+ .... -..++|+||..+|..+-
T Consensus 160 K~~~~~~~---~~~~-~~~~l~VGDs~~Di~aA 188 (258)
T 2i33_A 160 GKEKRREL---VSQT-HDIVLFFGDNLSDFTGF 188 (258)
T ss_dssp SSHHHHHH---HHHH-EEEEEEEESSGGGSTTC
T ss_pred CcHHHHHH---HHhC-CCceEEeCCCHHHhccc
Confidence 12211111 1122 24688999999998875
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=95.10 E-value=0.21 Score=52.00 Aligned_cols=44 Identities=20% Similarity=0.301 Sum_probs=32.9
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCcc
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGILT 701 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlT---GD~~~ta~~ia~~~gi~~ 701 (991)
.++.-+++.++++.+++.|+++.++| |..........++.|+..
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~ 67 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI 67 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc
Confidence 44555788999999999999999999 666666666666777753
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.10 E-value=0.016 Score=63.60 Aligned_cols=118 Identities=15% Similarity=0.154 Sum_probs=74.2
Q ss_pred eccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc----CCccCCceeeeCcccc--------cCC-HHHHhh
Q 001960 656 GIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC----GILTDNGIAIEGPEFR--------EKS-DEELSK 722 (991)
Q Consensus 656 ~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~----gi~~~~~~vi~g~~~~--------~~~-~~~~~~ 722 (991)
.....+.|+.++.++.|+++|++|+++||-...-++.+|..+ ||..++ || |..+. ... ..+..+
T Consensus 139 ~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~--Vi-G~~~~~~~~~~~~~~~~~~~~~d 215 (327)
T 4as2_A 139 VEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPEN--VI-GVTTLLKNRKTGELTTARKQIAE 215 (327)
T ss_dssp ECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGG--EE-EECEEEECTTTCCEECHHHHHHT
T ss_pred ccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHH--eE-eeeeeeecccccccccccccccc
Confidence 344567899999999999999999999999999999999984 665432 22 11110 000 111111
Q ss_pred h------ccccceEec-----cChhhHHHHHHHHHhhcCCEEEEeCCC-CCChHhhhh--CCeeEEec
Q 001960 723 L------IPKIQVMAR-----SSPMDKHTLVKHLRTTLGEVVAVTGDG-TNDAPALHE--ADIGLAMG 776 (991)
Q Consensus 723 ~------~~~~~v~ar-----~sP~~K~~~v~~l~~~~g~~v~~iGDG-~ND~~al~~--Advgiamg 776 (991)
- ..+..+..+ +--+-|...|+.........+++.||+ ..|.+||.. ++.|+.+-
T Consensus 216 g~y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~ 283 (327)
T 4as2_A 216 GKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHLW 283 (327)
T ss_dssp TCCCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEEE
T ss_pred ccccccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEEE
Confidence 0 011111111 223678888877654413568899999 579999965 45555544
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=94.96 E-value=0.04 Score=59.81 Aligned_cols=43 Identities=16% Similarity=0.089 Sum_probs=36.0
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCc
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGIL 700 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlT---GD~~~ta~~ia~~~gi~ 700 (991)
.+++-+++.+++++|++.|++++++| |..........+.+|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 34667889999999999999999999 57777777777778875
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=94.92 E-value=0.032 Score=59.14 Aligned_cols=116 Identities=16% Similarity=0.175 Sum_probs=73.3
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc---CCccCCceeeeCcccccCCHHHHhhhccccceEeccCh
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC---GILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~---gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (991)
-++.|++.++++.|+++|+++.++|+-+...+..+-+.+ |+...-+.++.+ + +-..-.|
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~-----------------~~~KP~p 190 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-K-----------------IGHKVES 190 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-G-----------------GCCTTCH
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-C-----------------CCCCCCH
Confidence 467899999999999999999999999988887776644 454321222222 1 1122223
Q ss_pred hhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeE-EecCCCc---HHHHhhcCEEecc
Q 001960 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL-AMGIAGT---EVAKESADVIILD 793 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgi-amg~~g~---~~ak~~ad~vl~~ 793 (991)
+-=..+.+.+.-. .+.++||||..+|+.+-++|++-. .+...+. +.....+|.++.+
T Consensus 191 ~~~~~~~~~lg~~-p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~ 251 (261)
T 1yns_A 191 ESYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITS 251 (261)
T ss_dssp HHHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESS
T ss_pred HHHHHHHHHhCcC-cccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECC
Confidence 2223344444322 357999999999999999999753 3321121 1222457777744
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=93.81 E-value=0.043 Score=57.34 Aligned_cols=111 Identities=14% Similarity=0.204 Sum_probs=72.5
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
.++.|++.+.++.|++.|+++.++|+... +..+-+.+|+...-+.++.+.+.. ...-.|+-=
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~i~~~~~~~----------------~~KP~p~~~ 155 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTFCADASQLK----------------NSKPDPEIF 155 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSEECCGGGCS----------------SCTTSTHHH
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccccccccccccc----------------CCCCcHHHH
Confidence 35689999999999999999999998653 456678889875444444444321 112223322
Q ss_pred HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee-EEecCCCcHHHHhhcCEEecc
Q 001960 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGTEVAKESADVIILD 793 (991)
Q Consensus 739 ~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg-iamg~~g~~~ak~~ad~vl~~ 793 (991)
....+.+.-. .+.++||||..+|+.+-++|++- |+++ .|. ..+|.++.+
T Consensus 156 ~~a~~~lg~~-p~e~l~VgDs~~di~aA~~aG~~~I~V~-~g~----~~ad~~~~~ 205 (243)
T 4g9b_A 156 LAACAGLGVP-PQACIGIEDAQAGIDAINASGMRSVGIG-AGL----TGAQLLLPS 205 (243)
T ss_dssp HHHHHHHTSC-GGGEEEEESSHHHHHHHHHHTCEEEEES-TTC----CSCSEEESS
T ss_pred HHHHHHcCCC-hHHEEEEcCCHHHHHHHHHcCCEEEEEC-CCC----CcHHHhcCC
Confidence 3333434333 36799999999999999999964 3344 332 346666543
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=92.33 E-value=0.42 Score=46.70 Aligned_cols=30 Identities=13% Similarity=0.252 Sum_probs=22.0
Q ss_pred HHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccC
Q 001960 614 ETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659 (991)
Q Consensus 614 ~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D 659 (991)
+.+..+..+|..++.+| .|..++|++++.|
T Consensus 136 ~~~~~~~~~G~T~v~va----------------~dg~~~g~i~l~D 165 (165)
T 2arf_A 136 DAMTDHEMKGQTAILVA----------------IDGVLCGMIAIAD 165 (165)
T ss_dssp HHHHHHHTTTSEEEEEE----------------ETTEEEEEEEECC
T ss_pred HHHHHHHhCCCeEEEEE----------------ECCEEEEEEEEEC
Confidence 34456677887777777 3567899999987
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=90.51 E-value=0.024 Score=58.11 Aligned_cols=89 Identities=17% Similarity=0.181 Sum_probs=53.8
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHH----HHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChh
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAI----ARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~i----a~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (991)
+.+++.+.++.|+++|+++.++|+.....+..+ ....+... .|.+. ..+....|.
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~------~~~~~---------------~~~~~~KP~ 147 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA------TNMNP---------------VIFAGDKPG 147 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT------TTBCC---------------CEECCCCTT
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc------cccch---------------hhhcCCCCC
Confidence 467899999999999999999999874433222 22222210 01000 011122221
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeE
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgi 773 (991)
- ..+.+.+++. |- ++|+||..+|+.+-+.|++-.
T Consensus 148 p-~~~~~~~~~~-g~-~l~VGDs~~Di~aA~~aG~~~ 181 (211)
T 2b82_A 148 Q-NTKSQWLQDK-NI-RIFYGDSDNDITAARDVGARG 181 (211)
T ss_dssp C-CCSHHHHHHT-TE-EEEEESSHHHHHHHHHTTCEE
T ss_pred H-HHHHHHHHHC-CC-EEEEECCHHHHHHHHHCCCeE
Confidence 1 1122333333 54 999999999999999999753
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=90.11 E-value=0.11 Score=60.43 Aligned_cols=97 Identities=13% Similarity=0.200 Sum_probs=60.0
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCC------CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEecc
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGD------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD------~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (991)
++.|++.+.++.|+++|+++.++|+- ......... .|+...-+.++.+++.. ...-
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~--~~l~~~fd~i~~~~~~~----------------~~KP 161 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM--CELKMHFDFLIESCQVG----------------MVKP 161 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH--HHHHTTSSEEEEHHHHT----------------CCTT
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh--hhhhhheeEEEeccccC----------------CCCC
Confidence 67899999999999999999999996 222222221 13332222333333211 1122
Q ss_pred ChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEe
Q 001960 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 775 (991)
Q Consensus 734 sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiam 775 (991)
.|+-=..+.+.+.-. .+.++++||..||+.+.+.|++....
T Consensus 162 ~p~~~~~~~~~lg~~-p~~~~~v~D~~~di~~a~~aG~~~~~ 202 (555)
T 3i28_A 162 EPQIYKFLLDTLKAS-PSEVVFLDDIGANLKPARDLGMVTIL 202 (555)
T ss_dssp CHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHcCCC-hhHEEEECCcHHHHHHHHHcCCEEEE
Confidence 233333333444323 35688999999999999999988655
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=87.87 E-value=0.011 Score=59.37 Aligned_cols=41 Identities=12% Similarity=0.090 Sum_probs=35.7
Q ss_pred CCCcccHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCC
Q 001960 659 DPMRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECGI 699 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~a-Gi~v~mlTGD~~~ta~~ia~~~gi 699 (991)
-++.||+.+.++.|+++ |+++.++|+.....+..+.+.+|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 46789999999999999 999999999988777777777776
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=87.50 E-value=0.16 Score=54.79 Aligned_cols=35 Identities=14% Similarity=0.165 Sum_probs=27.6
Q ss_pred Hhccccccccchhhhcc---------CCeEEEEeCccCccccCce
Q 001960 431 MMNDKALVRHLAACETM---------GSATSICSDKTGTLTTNHM 466 (991)
Q Consensus 431 ~~~~~ilvr~~~~~E~l---------g~v~~I~~DKTGTLT~n~m 466 (991)
+.|.++++|+++.+|.+ .+.. |+||||||||+...
T Consensus 16 l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~ 59 (297)
T 4fe3_A 16 FQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSY 59 (297)
T ss_dssp GTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEE
T ss_pred HhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeecc
Confidence 57889999999999874 2333 67799999998654
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=86.74 E-value=0.61 Score=48.82 Aligned_cols=118 Identities=13% Similarity=0.139 Sum_probs=60.4
Q ss_pred ccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHH--HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccce-Eecc
Q 001960 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINT--AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV-MARS 733 (991)
Q Consensus 657 i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~t--a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v-~ar~ 733 (991)
-..++.|++.++++.|+ .|+++ ++|...... +.. .+.+.. . ....+...+..-.+ ...-
T Consensus 123 ~~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~-------------~~~~~~--~-l~~~f~~~~~~~~~~~~KP 184 (264)
T 1yv9_A 123 DTELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERG-------------LLPGAG--S-VVTFVETATQTKPVYIGKP 184 (264)
T ss_dssp CTTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTE-------------EEECHH--H-HHHHHHHHHTCCCEECSTT
T ss_pred CCCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCC-------------cccCCc--H-HHHHHHHHhCCCccccCCC
Confidence 35567899999999997 89997 777755311 000 000000 0 00011111110001 1222
Q ss_pred ChhhHHHHHHHHHhhcCCEEEEeCCC-CCChHhhhhCCee---EEecCCCcHHHHh---hcCEEecc
Q 001960 734 SPMDKHTLVKHLRTTLGEVVAVTGDG-TNDAPALHEADIG---LAMGIAGTEVAKE---SADVIILD 793 (991)
Q Consensus 734 sP~~K~~~v~~l~~~~g~~v~~iGDG-~ND~~al~~Advg---iamg~~g~~~ak~---~ad~vl~~ 793 (991)
.|.-=..+.+.+.-. .+.++||||+ .||+.+.++|++. +..|....+..++ .+|+++.+
T Consensus 185 ~p~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~ 250 (264)
T 1yv9_A 185 KAIIMERAIAHLGVE-KEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDS 250 (264)
T ss_dssp SHHHHHHHHHHHCSC-GGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESS
T ss_pred CHHHHHHHHHHcCCC-HHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEec
Confidence 222222222333212 2569999999 6999999999977 4445222222232 58998854
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=86.43 E-value=0.75 Score=43.58 Aligned_cols=41 Identities=12% Similarity=0.097 Sum_probs=34.8
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHcCCcc
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDN---INTAKAIARECGILT 701 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~---~~ta~~ia~~~gi~~ 701 (991)
+-|++.++|++|+++|++++++||++ ...+....++.|+..
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~ 68 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF 68 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence 45799999999999999999999998 566777777888853
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=85.58 E-value=0.51 Score=53.57 Aligned_cols=40 Identities=13% Similarity=0.260 Sum_probs=34.0
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCC------------HHHHHHHHHHcCCc
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDN------------INTAKAIARECGIL 700 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~------------~~ta~~ia~~~gi~ 700 (991)
+-|++.++++.|+++|+++.++|+.. ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999965 22377788889984
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=83.56 E-value=1.9 Score=42.18 Aligned_cols=101 Identities=10% Similarity=0.052 Sum_probs=60.2
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCC---CH---HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEecc
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGD---NI---NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD---~~---~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (991)
++.||+.+.++.|++ ++++.++|+- .. .+...+.+..|.......+++|++
T Consensus 69 ~~~pg~~e~L~~L~~-~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~---------------------- 125 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNE-HYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRK---------------------- 125 (180)
T ss_dssp CBCTTHHHHHHHHTT-TSEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCG----------------------
T ss_pred CCCcCHHHHHHHHHh-cCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCc----------------------
Confidence 678999999999998 5999999997 21 112234444554432223333322
Q ss_pred ChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 001960 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 734 sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
.| . +.++++||..+|+. ++|+-.|.+. .+... ...+++++.+ +..+..++
T Consensus 126 ---~~----------l-~~~l~ieDs~~~i~--~aaG~~i~~~-~~~~~-~~~~~~~i~~--~~el~~~l 175 (180)
T 3bwv_A 126 ---NI----------I-LADYLIDDNPKQLE--IFEGKSIMFT-ASHNV-YEHRFERVSG--WRDVKNYF 175 (180)
T ss_dssp ---GG----------B-CCSEEEESCHHHHH--HCSSEEEEEC-CGGGT-TCCSSEEECS--HHHHHHHH
T ss_pred ---Ce----------e-cccEEecCCcchHH--HhCCCeEEeC-CCccc-CCCCceecCC--HHHHHHHH
Confidence 11 1 23689999999985 4566555553 22221 1346777644 77766554
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.31 E-value=0.36 Score=48.56 Aligned_cols=91 Identities=14% Similarity=0.059 Sum_probs=64.7
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
=.+|||+.+.++.|++. +++.+.|.-....|..+.+.+|+...-..++.+++. ...|
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~----------------------~~~k 123 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVFRARLFRESC----------------------VFHR 123 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGC----------------------EEET
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEcccc----------------------eecC
Confidence 36799999999999998 999999999999999999999986421122222221 1112
Q ss_pred HHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeE
Q 001960 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 739 ~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgi 773 (991)
...++.++.- | +.|++++|..++..+=+.|++-|
T Consensus 124 ~~~lK~L~~L-g~~~~~~vivDDs~~~~~~~~~ngi~i 160 (195)
T 2hhl_A 124 GNYVKDLSRL-GRELSKVIIVDNSPASYIFHPENAVPV 160 (195)
T ss_dssp TEEECCGGGS-SSCGGGEEEEESCGGGGTTCGGGEEEC
T ss_pred CceeeeHhHh-CCChhHEEEEECCHHHhhhCccCccEE
Confidence 2233333332 3 46999999999998877776665
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=83.16 E-value=0.48 Score=47.01 Aligned_cols=91 Identities=13% Similarity=0.062 Sum_probs=63.8
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
=.+|||+.+.++.|.+. +++.+.|.-....|..+.+.+|....-..++.+++. ...|
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~----------------------~~~k 110 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRESC----------------------VFHR 110 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGS----------------------EEET
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCc----------------------eecC
Confidence 35799999999999998 999999999999999999999985321112222111 1112
Q ss_pred HHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeE
Q 001960 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 739 ~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgi 773 (991)
...++.++.- | +.|.++||..+|..+=..+++-|
T Consensus 111 ~~~~k~L~~L-g~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 111 GNYVKDLSRL-GRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp TEEECCGGGT-CSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred CcEeccHHHh-CCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 2233333332 3 56999999999998877776665
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 991 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 4e-38 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 2e-37 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 3e-32 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 9e-25 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 6e-22 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 2e-20 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 2e-16 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 7e-19 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 2e-18 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 1e-12 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 5e-11 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 2e-07 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 2e-06 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 3e-06 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 2e-04 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 5e-04 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 6e-04 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 7e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 0.001 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 0.002 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 0.002 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 0.003 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 137 bits (347), Expect = 4e-38
Identities = 67/161 (41%), Positives = 91/161 (56%), Gaps = 6/161 (3%)
Query: 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GI 705
T DP R V S+ +CR AGI V M+TGDN TA AI R GI +N
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 706 AIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPA 765
A G EF + E + + AR P K +V++L++ A+TGDG NDAPA
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEI-TAMTGDGVNDAPA 128
Query: 766 LHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 806
L +A+IG+AMG +GT VAK ++++++ DDNFSTIV + G
Sbjct: 129 LKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 142 bits (359), Expect = 2e-37
Identities = 42/390 (10%), Positives = 95/390 (24%), Gaps = 59/390 (15%)
Query: 433 NDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSS 492
+ + L +G + I + + + ++I S G +
Sbjct: 22 SALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRN-RIFQKDKILNKLKSLGLNSNWDM 80
Query: 493 IPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKI 552
+ S L+ + + L A + + Q
Sbjct: 81 LFIVFSIHLI----------------DILKKLSHDEIEAFMYQDEPVELKLQNISTNLAD 124
Query: 553 VKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHL 612
+ + V + + A+ + +++A + L
Sbjct: 125 CFNLNEQLPLQFLDNVKVGKNNIYAALEEFAT---------------TELHVSDATLFSL 169
Query: 613 NETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPM--RPGVKESVA 670
+ A E + L + G + + + VK +
Sbjct: 170 KGALWTLAQEVYQEWYLGSKLYEDVE----KKIARTTFKTGYIYQEIILRPVDEVKVLLN 225
Query: 671 ICRSAGITVRMVTGDNINTAKAIARECGILT--DNGIAIEGPEFREKSDEELSKL----- 723
+ AG + + TG G+L + + E +
Sbjct: 226 DLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKP 285
Query: 724 ----IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD---IGLAMG 776
+ + + + V + GD D + + IG G
Sbjct: 286 NPFSYIAALYGNNRDKYESYINKQDNIVN-KDDVFIVGDSLADLLSAQKIGATFIGTLTG 344
Query: 777 IAGTEVAKE----SADVIILDDNFSTIVTV 802
+ G + A E AD +I ++ + V
Sbjct: 345 LKGKDAAGELEAHHADYVI--NHLGELRGV 372
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 122 bits (307), Expect = 3e-32
Identities = 44/212 (20%), Positives = 72/212 (33%), Gaps = 15/212 (7%)
Query: 466 MTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN----KT 521
MTV +I E D ++ + L + G+ N K
Sbjct: 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKR 61
Query: 522 EILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP--EGGFRVH 579
+ G +E+A+L+ L G + R + V FNS K + E +
Sbjct: 62 DTAGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLV 121
Query: 580 CKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEI----- 634
KGA E IL C L G+ +PL++ + + R L + +
Sbjct: 122 MKGAPERILDRCSSIL-VQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKF 180
Query: 635 --GNEFSADAP-IPTEGYTCIGIVGIKDPMRP 663
G +F D PTE +G++ + D
Sbjct: 181 PRGFKFDTDELNFPTEKLCFVGLMSMIDHHHH 212
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 98.6 bits (245), Expect = 9e-25
Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 30/155 (19%)
Query: 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEG 709
T G D ++ K +V + GI V M+TGDN +A+AI+RE
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL------------ 58
Query: 710 PEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 769
V+A P K VK L+ EVVA GDG NDAPAL +A
Sbjct: 59 ---------------NLDLVIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQA 101
Query: 770 DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804
D+G+A+G +G++VA ES D++++ D+ +V +
Sbjct: 102 DLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 98.2 bits (244), Expect = 6e-22
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 33/202 (16%)
Query: 764 PALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTV 823
P A I + + +AK++A V ++ +V GR++Y N+++F+++ ++
Sbjct: 193 PEGLPAVITTCLALGTRRMAKKNAIV-------RSLPSVETLGRAIYNNMKQFIRYLISS 245
Query: 824 NVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGN 883
NV ++ F +A L L VQLLWVN++ D L A AL PP+ D+M R P K
Sbjct: 246 NVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEP 305
Query: 884 FISNVMWRNILGQSLYQ-------FLIIWYLQTRGKAV---------------FRLDGPD 921
IS ++ + Y + G V +G D
Sbjct: 306 LISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLD 365
Query: 922 PDLIL----NTLIFNTFVFCQL 939
++ T+ + V ++
Sbjct: 366 CEIFEAPEPMTMALSVLVTIEM 387
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 93.2 bits (231), Expect = 2e-20
Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 22/177 (12%)
Query: 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFF 401
D+TPLQ KL+ + K+ V + + + G F + G + +F
Sbjct: 130 DKTPLQQKLDEFGEQLSKVISLICVAVWLINI-GHFNDPVH-------GGSWIRGAIYYF 181
Query: 402 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDK--TG 459
IAV + V A+PEGLP +T LA ++M A+VR L + ET+G A +
Sbjct: 182 KIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRY 241
Query: 460 TLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIG 516
+++N V+ + A G +LL ++ + +G
Sbjct: 242 LISSNVGEVVCIFLT------------AALGLPEALIPVQLLWVNLVTDGLPATALG 286
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 80.9 bits (199), Expect = 2e-16
Identities = 35/166 (21%), Positives = 54/166 (32%), Gaps = 13/166 (7%)
Query: 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
E S T G++ + + R E YG N+ + W V E D+ + IL
Sbjct: 8 STEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRIL 65
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
+ A +S V+ EG V ILL++ A Q E+
Sbjct: 66 LLAACISFVLAWFEEGEETITAFVEPFV--ILLILIANAIVGVWQ---------ERNAEN 114
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLIN 285
A + + D P G+Q+ + LIN
Sbjct: 115 AIEALKEYEPAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLIN 160
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 84.9 bits (209), Expect = 7e-19
Identities = 32/189 (16%), Positives = 57/189 (30%), Gaps = 31/189 (16%)
Query: 499 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQA------------- 545
+L N E +G TETA+ +
Sbjct: 52 ELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANAC 111
Query: 546 ---ERQASKIVKVEPFNSVKKQMGVVIELPEGG-----FRVHCKGASEIILAACDKFLNS 597
RQ K F+ +K M V + ++ KGA E ++ C+
Sbjct: 112 NSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV- 170
Query: 598 NGEVVPLNEAAVNHLNETIEKF--ASEALRTLCLACMEIGNEFSADAPIPTEGY------ 649
VP+ + I+++ + LR L LA + + + +
Sbjct: 171 GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETD 230
Query: 650 -TCIGIVGI 657
T +G+VG+
Sbjct: 231 LTFVGVVGM 239
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 83.5 bits (205), Expect = 2e-18
Identities = 27/210 (12%), Positives = 59/210 (28%), Gaps = 11/210 (5%)
Query: 612 LNETIEKFASEALRTLCLACM--EIGNEFSADAPIPTEGYTC----IGIVGIKDPMRPGV 665
+ ++ FA L + + + + V +R G
Sbjct: 21 IINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLEDAKIREGF 80
Query: 666 KESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP 725
+E VA I +++G + I F + +
Sbjct: 81 REFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDR--IYCNHASF-DNDYIHIDWPHS 137
Query: 726 KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKE 785
+ K +++ L + + + GD D A +D+ A E ++
Sbjct: 138 CKGTCSNQCGCCKPSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQ 196
Query: 786 SADVIILDDNFSTIVTVAKWGRSVYINIQK 815
+ + + D F I + + V +Q
Sbjct: 197 NLNHLPYQD-FYEIRKEIENVKEVQEWLQN 225
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 63.6 bits (154), Expect = 1e-12
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 16/114 (14%)
Query: 239 TVQVARNGFR--RKISIYDLLPGDIVHLCMGDQVPADGLFVSGF--SVLINESSLTGESE 294
+V R + ++I D++PGDIV + +GD+VPAD +S ++ +++S LTGES
Sbjct: 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESV 61
Query: 295 PVNVNA------------LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL 336
V + L SGT + G +V T G+ T+ GK+ +
Sbjct: 62 SVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.5 bits (148), Expect = 5e-11
Identities = 26/142 (18%), Positives = 52/142 (36%), Gaps = 8/142 (5%)
Query: 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 713
I + PG++E V+ + + V +++G + + +A + I N A
Sbjct: 76 IAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKF-- 133
Query: 714 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIG 772
+ + + K ++K L+ + + + GDG D A AD
Sbjct: 134 ----YFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAF 189
Query: 773 LAMG-IAGTEVAKESADVIILD 793
+ G + K++A I D
Sbjct: 190 IGFGGNVIRQQVKDNAKWYITD 211
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 50.6 bits (119), Expect = 2e-07
Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 9/145 (6%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
G +E++ ++ G V +V+G I + G+ + + + D
Sbjct: 75 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGD-- 132
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
+ + + + K L + VAV GDG ND +A + +A
Sbjct: 133 ----VEGEVLKENAKGEILEKIAKIEGINLEDTVAV-GDGANDISMFKKAGLKIAFC--A 185
Query: 780 TEVAKESADVIILDDNFSTIVTVAK 804
+ KE AD+ I + I+ K
Sbjct: 186 KPILKEKADICIEKRDLREILKYIK 210
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 47.2 bits (111), Expect = 2e-06
Identities = 16/77 (20%), Positives = 22/77 (28%), Gaps = 1/77 (1%)
Query: 718 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI 777
+L V + D +L V GD ND L EA G+
Sbjct: 113 HKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH- 171
Query: 778 AGTEVAKESADVIILDD 794
A V +E +
Sbjct: 172 APENVIREFPQFPAVHT 188
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 47.3 bits (111), Expect = 3e-06
Identities = 32/226 (14%), Positives = 55/226 (24%), Gaps = 11/226 (4%)
Query: 586 IILAACDK---FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADA 642
I + D N + A+ T+ A
Sbjct: 2 IKAISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFA-EAASILIGTSG 60
Query: 643 PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD 702
P+ E I + + +E + I R T I+ +
Sbjct: 61 PVVAEDGGAISYKKKRIFLASMDEEWILWNE---IRKRFPNARTSYTMPDRRAGLVIMRE 117
Query: 703 NGIAIEGPEFREKSDEELSKLIPK--IQVMARSSPMDKHTLVKHLRTTLG-EVVAVTGDG 759
E + + L + I V + + VA GDG
Sbjct: 118 TINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 177
Query: 760 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805
ND A +A+ A ++ KE+AD + +
Sbjct: 178 ENDLDAFKVVGYKVAVAQA-PKILKENADYVTKKEYGEGGAEAIYH 222
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 42.2 bits (98), Expect = 2e-04
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
E AV GD ND L A G+AMG A E K AD + L ++
Sbjct: 231 ETAAV-GDSLNDKSMLEAAGKGVAMGNA-REDIKSIADAVTLTND 273
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 40.4 bits (93), Expect = 5e-04
Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 741 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 790
L + R E AV GD ND P D +G + A+ + +I
Sbjct: 188 LDFYKRLGQIESYAV-GDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSII 236
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 40.3 bits (93), Expect = 6e-04
Identities = 30/221 (13%), Positives = 57/221 (25%), Gaps = 68/221 (30%)
Query: 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-----------CGILTD 702
+ + ES+ G+TV +++G+ I A+ GI+ D
Sbjct: 14 LTDRDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFD 73
Query: 703 NGIAIE----------------------------------GPEFREKSDEELSKLIPKIQ 728
N +I+ G + + + + K
Sbjct: 74 NDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRG 133
Query: 729 VMARSSPMDKHTLVKHLRTTLG------------EVVAVTGDGTNDAPALHEADIGLAMG 776
+ S H + + + + V GD ND P
Sbjct: 134 FVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPA 193
Query: 777 IAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFV 817
A T+ K +D V+ +G + + F
Sbjct: 194 NA-TDNIKAVSD----------FVSDYSYGEEIGQIFKHFE 223
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 40.4 bits (93), Expect = 7e-04
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
+ V V GD ND L A+ A T+ AK A ++ +
Sbjct: 224 DQVLVVGDAENDIAMLSNFKYSFAVANA-TDSAKSHAKCVLPVSH 267
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 39.2 bits (90), Expect = 0.001
Identities = 37/240 (15%), Positives = 67/240 (27%), Gaps = 40/240 (16%)
Query: 594 FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIG 653
LN N E+ + + L+ + R L F P +
Sbjct: 13 LLNDNLEISEKDRRNIEKLSRKCYVVFASG-RMLVSTLNVEKKYFKRTFPTIAYNGAIVY 71
Query: 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 713
+ + + VA I V + + + ++R
Sbjct: 72 LPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYR 131
Query: 714 EKSD-EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVT---------------- 756
+ + EL + +++ +P L + L +VV V
Sbjct: 132 VEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDK 191
Query: 757 ---------------------GDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
GD ND EA + +AM A E KE++D++ L +N
Sbjct: 192 GKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENA-IEKVKEASDIVTLTNN 250
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 39.2 bits (90), Expect = 0.002
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
E + GD ND + A +G+A+ A KE A+ + +
Sbjct: 214 EEIMAIGDQENDIAMIEYAGVGVAVDNA-IPSVKEVANFVTKSNL 257
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 38.7 bits (89), Expect = 0.002
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Query: 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIIL 792
K + + G E GDG ND L A IG+AMG A E K +AD +
Sbjct: 185 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQA-KEDVKAAADYVTA 243
Query: 793 DDN 795
+
Sbjct: 244 PID 246
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 38.4 bits (88), Expect = 0.003
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 4/66 (6%)
Query: 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVY 810
+ V GD NDA L A AMG A E K+ A D+N + V + V
Sbjct: 207 QNVVAIGDSGNDAEMLKMARYSFAMGNA-AENIKQIARYATDDNNHEGALNVIQA---VL 262
Query: 811 INIQKF 816
N F
Sbjct: 263 DNTYPF 268
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 991 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 100.0 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.96 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.95 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.93 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.9 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.88 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.25 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.21 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.13 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.07 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.05 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.05 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.02 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.98 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.95 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.92 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.87 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.76 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.7 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.7 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.66 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.41 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.98 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.91 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.68 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.59 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.54 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.44 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.2 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.09 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.96 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 96.86 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.73 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.63 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.62 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.57 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 96.51 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.26 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.2 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 95.98 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.94 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 95.3 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 95.22 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 95.02 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 94.36 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 93.87 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 93.85 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 93.51 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 92.83 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 92.55 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 92.43 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 91.82 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 89.63 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 89.54 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 87.76 | |
| d2aw0a_ | 72 | Menkes copper-transporting ATPase {Human (Homo sap | 86.75 | |
| d1cpza_ | 68 | Copper chaperone {Enterococcus hirae [TaxId: 1354] | 86.12 | |
| d2qifa1 | 69 | Copper chaperone {Bacillus subtilis, CopZ [TaxId: | 83.18 | |
| d1q8la_ | 84 | Menkes copper-transporting ATPase {Human (Homo sap | 82.78 | |
| d1osda_ | 72 | Mercuric ion binding protein MerP {Ralstonia metal | 81.96 | |
| d2ggpb1 | 72 | Copper transporter domain ccc2a {Baker's yeast (Sa | 81.37 | |
| d1p6ta1 | 72 | Potential copper-translocating P-type ATPase CopA | 80.37 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=3.2e-38 Score=367.78 Aligned_cols=230 Identities=24% Similarity=0.374 Sum_probs=177.6
Q ss_pred CCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCC-
Q 001960 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWP- 197 (991)
Q Consensus 119 ~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~- 197 (991)
.+++++++.|++|+++||+++| +++|+++||+|++++++++++|+.++++|+++++++|+++|++|++++...++..
T Consensus 7 ~~~e~v~~~l~td~~~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~ 84 (472)
T d1wpga4 7 KSTEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEET 84 (472)
T ss_dssp SCHHHHHHHHTCCTTTCBCHHH--HHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTTST
T ss_pred CCHHHHHHHhCcCcccCcCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhccccc
Confidence 4799999999999999999987 9999999999999999999999999999999999999999999999998765543
Q ss_pred -CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEE
Q 001960 198 -KGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLF 276 (991)
Q Consensus 198 -~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgil 276 (991)
..|+|+..|++.+++...++.++|++.++...++.+...+.
T Consensus 85 ~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~-------------------------------------- 126 (472)
T d1wpga4 85 ITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA-------------------------------------- 126 (472)
T ss_dssp TSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC--------------------------------------
T ss_pred chhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc--------------------------------------
Confidence 57999988877777777776666666665555554421110
Q ss_pred EeecceEEecccCCCCCcceeccCCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHH
Q 001960 277 VSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATI 356 (991)
Q Consensus 277 l~g~~l~VDeS~LTGES~pv~k~~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~ 356 (991)
...+++|+|.++++++..
T Consensus 127 --------------------------------------------------------------~~~~~~P~d~~l~~~g~~ 144 (472)
T d1wpga4 127 --------------------------------------------------------------TEQDKTPLQQKLDEFGEQ 144 (472)
T ss_dssp --------------------------------------------------------------CCCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------ccccCchHHHHHHHHHHH
Confidence 112358888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhcccc
Q 001960 357 IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKA 436 (991)
Q Consensus 357 i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~i 436 (991)
++..+..++..++...+.+. .. ..........+.+.+..+++++|+++|||||++++++++++++||+|+|+
T Consensus 145 i~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~ 216 (472)
T d1wpga4 145 LSKVISLICVAVWLINIGHF-----ND---PVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNA 216 (472)
T ss_dssp HHHHHHHHHHHHHHHCCTTS-----SS---CCSSSCSSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTE
T ss_pred HHHHHHHHHHHHHHHHHHHH-----HH---HHhhhhhHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhccc
Confidence 87766555544443321111 00 00111112245677889999999999999999999999999999999999
Q ss_pred ccccchhhhccCCeEEEEeCcc
Q 001960 437 LVRHLAACETMGSATSICSDKT 458 (991)
Q Consensus 437 lvr~~~~~E~lg~v~~I~~DKT 458 (991)
+||+++++|++|+.+++|+|||
T Consensus 217 lVr~L~avE~~g~~~~~~~~k~ 238 (472)
T d1wpga4 217 IVRSLPSVETLGRAIYNNMKQF 238 (472)
T ss_dssp EESCTTHHHHHTHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHhHHh
Confidence 9999998888777777777666
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=3.8e-33 Score=276.35 Aligned_cols=146 Identities=46% Similarity=0.692 Sum_probs=140.8
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----eeeeCcccccCCHHHHhhhccccceEeccC
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----IAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~----~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 734 (991)
||+|++++++|+.|+++||+|+|+|||+..||.++|+++||..++. ..++|.+++.+...++.+..++..+|+|++
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence 9999999999999999999999999999999999999999987653 467899999999999999999999999999
Q ss_pred hhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHH
Q 001960 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 806 (991)
Q Consensus 735 P~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~g 806 (991)
|+||..+|+.+|++ |++|+|+|||.||+|||++|||||+|| +|+++|+++||+++++++|..|+++|+||
T Consensus 99 p~~K~~lv~~l~~~-g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 99 PSHKSKIVEYLQSY-DEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp HHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhc-ccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999 999999999999999999999999999 99999999999999999999999999998
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.96 E-value=5e-29 Score=258.57 Aligned_cols=198 Identities=21% Similarity=0.244 Sum_probs=154.5
Q ss_pred eEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCC----ceeecCChhhHHHHHHHHHcCC
Q 001960 466 MTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGG 541 (991)
Q Consensus 466 m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~ 541 (991)
|+|+++|++++.++.+.............++.++.+..+.++|+++.+..++.+ .....|+|+|.||+.++.+.|.
T Consensus 2 MTV~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~ 81 (214)
T d1q3ia_ 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCG 81 (214)
T ss_dssp CEEEEEEETTEEEECCCC------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHS
T ss_pred eEEEEEEECCEEEEcCCCCcCCCcccccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCC
Confidence 999999999998875543322222223345566667788888888877654332 3456899999999999999999
Q ss_pred ChHHHhhhcceEEEecCCCCCceEEEEEEeC--CCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHH
Q 001960 542 DFQAERQASKIVKVEPFNSVKKQMGVVIELP--EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKF 619 (991)
Q Consensus 542 ~~~~~~~~~~il~~~pF~s~~k~msviv~~~--~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~ 619 (991)
+....+..+++++.+||+|+||+|+++++.+ ++.+++|+|||||.|+++|++++. +|...+++++.++.+.+.+++|
T Consensus 82 ~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i~~~~~~~ 160 (214)
T d1q3ia_ 82 SVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILV-QGKEIPLDKEMQDAFQNAYLEL 160 (214)
T ss_dssp CHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHH
T ss_pred CHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheee-CCceeechHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999875 356899999999999999998875 7889999999999999999999
Q ss_pred HHcccceeeeeEEecCCCC--------CCCCCCCCCCcEEEEEeeccCCCccc
Q 001960 620 ASEALRTLCLACMEIGNEF--------SADAPIPTEGYTCIGIVGIKDPMRPG 664 (991)
Q Consensus 620 a~~glR~l~~A~~~l~~~~--------~~~~~~~e~~l~~lG~~~i~D~lr~~ 664 (991)
+++|+||||+|||+++.+. .++.+..++||+|+|++||+||||++
T Consensus 161 a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 161 GGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp HHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred hhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 9999999999999997642 12235568899999999999999975
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.95 E-value=1.4e-28 Score=233.52 Aligned_cols=123 Identities=41% Similarity=0.628 Sum_probs=108.8
Q ss_pred EEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEe
Q 001960 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMA 731 (991)
Q Consensus 652 lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a 731 (991)
.+.++++|++||+++++|+.|+++||+++|+|||+..+|.++|++|||.. +++
T Consensus 13 ~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~---------------------------v~~ 65 (135)
T d2b8ea1 13 TLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIA 65 (135)
T ss_dssp CCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EEC
T ss_pred EEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh---------------------------hcc
Confidence 45788999999999999999999999999999999999999999999964 999
Q ss_pred ccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 732 RSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 732 r~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
+++|++|..+|+.+|+ +++|+|+|||.||+|||++|||||+|| ++++.++++||+++++++|.+|+++|+
T Consensus 66 ~~~p~~k~~~v~~~q~--~~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 66 EVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp SCCHHHHHHHHHHHTT--TSCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred ccchhHHHHHHHHHHc--CCEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 9999999999999986 568999999999999999999999999 899999999999999999999998874
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.93 E-value=6.3e-32 Score=305.55 Aligned_cols=325 Identities=13% Similarity=0.047 Sum_probs=221.0
Q ss_pred cchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCC
Q 001960 440 HLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN 519 (991)
Q Consensus 440 ~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~ 519 (991)
-+.+.|+||..+++|+|||||+|.|+|++..+.........+. ...+++ .+++. ..+.|+.+...
T Consensus 29 ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~--------~g~n~~-~dl~~-~~~~~~~~~~~----- 93 (380)
T d1qyia_ 29 LLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKS--------LGLNSN-WDMLF-IVFSIHLIDIL----- 93 (380)
T ss_dssp HHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHH--------TTCCCH-HHHHH-HHHHHHHHHHH-----
T ss_pred HhhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhh--------cCCChh-HHHHH-HHHHHHHHHHH-----
Confidence 3567799999999999999999999998743221111110000 001111 12211 11111111111
Q ss_pred ceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCC
Q 001960 520 KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNG 599 (991)
Q Consensus 520 ~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g 599 (991)
...++|++.+++......+..+...++.+.....+||++.+|+|+++....++.+....||+++.+.
T Consensus 94 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~----------- 160 (380)
T d1qyia_ 94 --KKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH----------- 160 (380)
T ss_dssp --TTSCHHHHHHHHHCSSCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT-----------
T ss_pred --hhcCCCcHHHHHHHHhhccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC-----------
Confidence 1256788888887655444444555667777788999999999988765444444455566665432
Q ss_pred eeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcc--cHHHHHHHHHHCCC
Q 001960 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAGI 677 (991)
Q Consensus 600 ~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~--~v~~~I~~l~~aGi 677 (991)
+++..+..+.+.+..++.+|+|++++|++.++.... ....+....|+++.+|++|| |++++++.|+++|+
T Consensus 161 ----~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~----~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi 232 (380)
T d1qyia_ 161 ----VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEK----KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGF 232 (380)
T ss_dssp ----CSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHC----SCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTC
T ss_pred ----CcHHHHHHHHhHHHHHHHHHHHHHHHhhhccccccc----ccchhhHhcccccccccccchhhHHHHHHHHHHCCC
Confidence 222233445667888999999999999987643211 11123344588899999665 99999999999999
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCccC--CceeeeCcccccCCHHHH---------hhhccccceEeccChhhHHHHHHHHH
Q 001960 678 TVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEEL---------SKLIPKIQVMARSSPMDKHTLVKHLR 746 (991)
Q Consensus 678 ~v~mlTGD~~~ta~~ia~~~gi~~~--~~~vi~g~~~~~~~~~~~---------~~~~~~~~v~ar~sP~~K~~~v~~l~ 746 (991)
+++|+|||+..+|.++++++||... ...++++.+......... .+.+....+++|.+|.+|..+++.++
T Consensus 233 ~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~ 312 (380)
T d1qyia_ 233 ELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNI 312 (380)
T ss_dssp EEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTC
T ss_pred eEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhC
Confidence 9999999999999999999999742 223444443211100000 01122334788999999999999999
Q ss_pred hhcCCEEEEeCCCCCChHhhhhCC---eeEEecCCCcHHHHh----hcCEEeccCCchHHHHHH
Q 001960 747 TTLGEVVAVTGDGTNDAPALHEAD---IGLAMGIAGTEVAKE----SADVIILDDNFSTIVTVA 803 (991)
Q Consensus 747 ~~~g~~v~~iGDG~ND~~al~~Ad---vgiamg~~g~~~ak~----~ad~vl~~~~~~~i~~~i 803 (991)
.. ++.|+|||||.||++|++.|| |||+||..|++++++ .||+++ +++..+.+++
T Consensus 313 ~~-~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 313 VN-KDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp SC-TTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred CC-CCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 88 999999999999999999999 999999888876554 799999 4488887654
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.90 E-value=1e-24 Score=199.50 Aligned_cols=98 Identities=35% Similarity=0.515 Sum_probs=89.1
Q ss_pred EEEEEeCCeE--EEeecCCcccCcEEEeCCCCeecccEEEEeec--ceEEecccCCCCCcceeccC------------CC
Q 001960 239 TVQVARNGFR--RKISIYDLLPGDIVHLCMGDQVPADGLFVSGF--SVLINESSLTGESEPVNVNA------------LN 302 (991)
Q Consensus 239 ~v~V~R~G~~--~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~--~l~VDeS~LTGES~pv~k~~------------~~ 302 (991)
.++|+|+|++ ++|+++||+|||+|.|++||+|||||+|+++. ++.||||+|||||.|+.|.. ..
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 5789999984 78999999999999999999999999998744 48999999999999999952 35
Q ss_pred CeEEeccEEecCeEEEEEEEEeccchhhHHHhhh
Q 001960 303 PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL 336 (991)
Q Consensus 303 ~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~ 336 (991)
+++|+||.|.+|+++++|++||.+|.+|+|++++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 6899999999999999999999999999998764
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.88 E-value=2.9e-22 Score=210.97 Aligned_cols=161 Identities=20% Similarity=0.185 Sum_probs=132.8
Q ss_pred hHHHHHHHHHHhcCCCceeec-CCCceeecCChhhHHHHHHHHHcCCChHH----------------HhhhcceEEEecC
Q 001960 496 SASKLLLQSIFNNTGGEVVIG-EGNKTEILGTPTETAILEFGLLLGGDFQA----------------ERQASKIVKVEPF 558 (991)
Q Consensus 496 ~~~~~l~~~i~~~~~~~~~~~-~~~~~~~~g~p~e~All~~a~~~g~~~~~----------------~~~~~~il~~~pF 558 (991)
+.++.++.+.++||++.+..+ +++.+...|+|+|.||+.++.+.|++... .+..+++++.+||
T Consensus 48 ~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF 127 (239)
T d1wpga3 48 DGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEF 127 (239)
T ss_dssp HHHHHHHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEeee
Confidence 344556677888888888765 34677889999999999999998876542 2467899999999
Q ss_pred CCCCceEEEEEEeCCC-----eEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHH--HHcccceeeeeE
Q 001960 559 NSVKKQMGVVIELPEG-----GFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKF--ASEALRTLCLAC 631 (991)
Q Consensus 559 ~s~~k~msviv~~~~~-----~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~--a~~glR~l~~A~ 631 (991)
+|+||||+|+++.+++ .+++|+|||||.|+++|+.++. +|...|++++.++.+.+.++++ |++|+|||++||
T Consensus 128 ~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~ 206 (239)
T d1wpga3 128 SRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALAT 206 (239)
T ss_dssp ETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEE
T ss_pred cccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceec-CCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEE
Confidence 9999999999997764 4789999999999999998875 6778899999999999999986 789999999999
Q ss_pred EecCCCCCCC-------CCCCCCCcEEEEEeec
Q 001960 632 MEIGNEFSAD-------APIPTEGYTCIGIVGI 657 (991)
Q Consensus 632 ~~l~~~~~~~-------~~~~e~~l~~lG~~~i 657 (991)
|+++.+.... .+.+|+||+|+|++||
T Consensus 207 k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 207 RDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp ESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred EECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 9997653211 1345789999999986
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.25 E-value=1e-11 Score=127.88 Aligned_cols=146 Identities=21% Similarity=0.240 Sum_probs=107.7
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccc--------------------------
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR-------------------------- 713 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~-------------------------- 713 (991)
.+.+.+.+++++|+++|++++++||++...+..++..+++..+ -..-+|..+.
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~-~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGP-VVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 97 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSC-EEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcc-cccccceeeeccccccccccccHHHHHHHHHHHhcc
Confidence 4678899999999999999999999999999999999988532 0000111000
Q ss_pred --------------------cCCHHHHhhhcc----c-------cceEeccChhhHHHHHHHHHhhcC---CEEEEeCCC
Q 001960 714 --------------------EKSDEELSKLIP----K-------IQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDG 759 (991)
Q Consensus 714 --------------------~~~~~~~~~~~~----~-------~~v~ar~sP~~K~~~v~~l~~~~g---~~v~~iGDG 759 (991)
....+.++++.. . ..+-.......|...++.+.+++| +.++++|||
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~ 177 (230)
T d1wr8a_ 98 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 177 (230)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred cccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecC
Confidence 001122222221 1 112223345788888888877645 569999999
Q ss_pred CCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHH
Q 001960 760 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGR 807 (991)
Q Consensus 760 ~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR 807 (991)
.||.+|++.|++||||| ++.+.+|+.||+|+.+++..++.+++++..
T Consensus 178 ~NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~l 224 (230)
T d1wr8a_ 178 ENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHIL 224 (230)
T ss_dssp GGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHHHH
Confidence 99999999999999999 899999999999999999999998876543
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.21 E-value=2.9e-11 Score=124.67 Aligned_cols=147 Identities=20% Similarity=0.190 Sum_probs=106.1
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeCcc--cccCCH-------------
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEGPE--FREKSD------------- 717 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~----~~-~vi~g~~--~~~~~~------------- 717 (991)
+.++.+++.+++++|++.|++++++||++...+..++...|+... ++ .+..... ......
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 456778999999999999999999999999999999999998542 11 1111000 000000
Q ss_pred -------------------------HHHhhhc--cccce-----Ee--ccChhhHHHHHHHHHhhcC---CEEEEeCCCC
Q 001960 718 -------------------------EELSKLI--PKIQV-----MA--RSSPMDKHTLVKHLRTTLG---EVVAVTGDGT 760 (991)
Q Consensus 718 -------------------------~~~~~~~--~~~~v-----~a--r~sP~~K~~~v~~l~~~~g---~~v~~iGDG~ 760 (991)
+.+.+.. ....+ .. .....+|...++.+.+++| +.|+++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 1111111 00001 11 1223589999998877655 4588899999
Q ss_pred CChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 761 NDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 761 ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
||.+|++.|++||||+ ++.+.+|+.||+++..++..+|.+++++
T Consensus 178 nD~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred chHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 9999999999999999 8999999999999999999999988764
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.13 E-value=3.7e-11 Score=127.28 Aligned_cols=144 Identities=24% Similarity=0.316 Sum_probs=104.8
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceee--eCccc---------cc--C-----------
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAI--EGPEF---------RE--K----------- 715 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi--~g~~~---------~~--~----------- 715 (991)
++-+.+.+++++|+++|++++++||++...+..+.+++++..+...++ .|..+ .. +
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~~ 100 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKL 100 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHHH
Confidence 467889999999999999999999999999999999999875432111 11100 00 0
Q ss_pred -----------------------------------------------------------CHHHHhhh---c----c-ccc
Q 001960 716 -----------------------------------------------------------SDEELSKL---I----P-KIQ 728 (991)
Q Consensus 716 -----------------------------------------------------------~~~~~~~~---~----~-~~~ 728 (991)
.++.+.+. + . ...
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (271)
T d1rkqa_ 101 SREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYT 180 (271)
T ss_dssp HHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHEE
T ss_pred HHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcceE
Confidence 00111110 0 0 010
Q ss_pred e------EeccCh--hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCch
Q 001960 729 V------MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFS 797 (991)
Q Consensus 729 v------~ar~sP--~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~ 797 (991)
+ +....| .+|...++.+.++++ +.++++|||.||.+||+.|++|+||+ ++.+..|+.||+++..++-.
T Consensus 181 ~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~~~ 259 (271)
T d1rkqa_ 181 VLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLED 259 (271)
T ss_dssp EEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTT
T ss_pred EEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCcC
Confidence 1 111233 379999999988755 45899999999999999999999999 99999999999999988888
Q ss_pred HHHHHHH
Q 001960 798 TIVTVAK 804 (991)
Q Consensus 798 ~i~~~i~ 804 (991)
++.++++
T Consensus 260 Gv~~~l~ 266 (271)
T d1rkqa_ 260 GVAFAIE 266 (271)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 8888775
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.07 E-value=6.9e-11 Score=125.09 Aligned_cols=68 Identities=28% Similarity=0.318 Sum_probs=61.3
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
.+|...++.|.+++| +.|+++|||.||.|||+.|+.|+||+ ++.+.+|+.||+|+.+++-.++.++|+
T Consensus 189 ~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 189 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred hHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 469999999988766 45899999999999999999999999 999999999999999888888888775
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.05 E-value=2.4e-10 Score=121.76 Aligned_cols=68 Identities=32% Similarity=0.413 Sum_probs=61.8
Q ss_pred hHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 737 ~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
+|...++.+.+++| +.|+++|||.||.+||+.|+.|+||+ ++++.+|+.||+++..++-.++.++|++
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 89999999988766 46999999999999999999999999 9999999999999998888889888753
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.05 E-value=2.4e-10 Score=112.41 Aligned_cols=101 Identities=20% Similarity=0.265 Sum_probs=85.8
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHH
Q 001960 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (991)
Q Consensus 667 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~ 746 (991)
.+|+.|++.|+.+.++||+....+...++++++.. ++. ...+|...++.+.
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~---------------------------~~~--~~~~K~~~l~~~~ 89 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL---------------------------FFL--GKLEKETACFDLM 89 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------EEE--SCSCHHHHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------ccc--ccccHHHHHHHHH
Confidence 48999999999999999999999999999999853 222 3346777777666
Q ss_pred hhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCch
Q 001960 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFS 797 (991)
Q Consensus 747 ~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~ 797 (991)
+++| +.|+++||+.||.|||+.|++|+||+ ++.+.+|+.||+|+..+.=.
T Consensus 90 ~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~ 142 (177)
T d1k1ea_ 90 KQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGK 142 (177)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTT
T ss_pred HHhcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCCCC
Confidence 5545 67999999999999999999999999 99999999999999876633
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.02 E-value=2.4e-10 Score=116.98 Aligned_cols=126 Identities=21% Similarity=0.274 Sum_probs=93.8
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCce-----ee-eCcccccCCHHHHhhhccccceEecc
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI-----AI-EGPEFREKSDEELSKLIPKIQVMARS 733 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~-----vi-~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (991)
+++|++.+.|+.|++.|++++++||.....+..+++.+|+...+.. +. +|.... ......-.
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g------------~~~~~p~~ 149 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAG------------FDETQPTA 149 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEE------------ECTTSGGG
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhcccc------------ceeeeeee
Confidence 3689999999999999999999999999999999999999642100 00 111100 00001113
Q ss_pred ChhhHHHHHHHHHhhcC-CEEEEeCCCCCChHhhhhCCeeEEecCC-CcHHHHhhcCEEeccCCchHH
Q 001960 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMGIA-GTEVAKESADVIILDDNFSTI 799 (991)
Q Consensus 734 sP~~K~~~v~~l~~~~g-~~v~~iGDG~ND~~al~~Advgiamg~~-g~~~ak~~ad~vl~~~~~~~i 799 (991)
.+..|..+++.++++.+ +.+.++|||.||.+|++.||++||+|.+ ..+..++.||+++.+ |..+
T Consensus 150 ~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~--f~el 215 (217)
T d1nnla_ 150 ESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD--FVEL 215 (217)
T ss_dssp STTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC--GGGG
T ss_pred ccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCC--HHHh
Confidence 46789999999987634 4689999999999999999999999732 345677889999855 6543
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.98 E-value=2.1e-10 Score=120.72 Aligned_cols=69 Identities=30% Similarity=0.365 Sum_probs=61.9
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
..|...++.|.+++| +.++++|||.||.+||+.|+.|+||+ ++++.+|+.||+|..+++-.++.++|++
T Consensus 185 ~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 185 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 479999999987655 56888999999999999999999999 9999999999999998888899988854
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.95 E-value=5.9e-10 Score=118.29 Aligned_cols=68 Identities=25% Similarity=0.289 Sum_probs=56.4
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCC-chHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN-FSTIVTVAK 804 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~-~~~i~~~i~ 804 (991)
..|...++.+.+.++ +.|+++|||.||.+||+.|++|+||+ ++.+.+|+.||+++..++ -.++.++++
T Consensus 206 ~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 206 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred chhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 478888888877644 57999999999999999999999999 999999999999997544 444666553
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.92 E-value=1e-09 Score=115.81 Aligned_cols=68 Identities=32% Similarity=0.455 Sum_probs=60.8
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
.+|...++.+.+++| ..|+++|||.||.|||+.|++|+||| ++.+.+|+.||+++.+++..++.++++
T Consensus 189 ~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 189 VDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred CchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 479999999877655 35888899999999999999999999 999999999999999888899988764
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.87 E-value=1.1e-09 Score=112.33 Aligned_cols=144 Identities=13% Similarity=0.086 Sum_probs=103.4
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC---ceeeeCcccccCCHHHHhhhccccceEeccChh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN---GIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~---~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (991)
+++|++.+.++.|++.|+++.++|+.....+..+.+++|+...- .....+...... ...+.....++..|.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~------~~~~~~~~~~~~k~~ 148 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHID------WPHSCKGTCSNQCGC 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEE------CTTCCCTTCCSCCSS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceec------cccccccccccCCHH
Confidence 47899999999999999999999999999999999999875320 011111111000 000111244567899
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHH
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYI 811 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~ 811 (991)
.|..+++.++.. ++.|+|+||+.||.+|+++||+++|++..+..+.++..++.. -++|..|...+++-....+
T Consensus 149 ~~~~~~~~~~~~-~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~~~~~ 221 (226)
T d2feaa1 149 CKPSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLP-YQDFYEIRKEIENVKEVQE 221 (226)
T ss_dssp CHHHHHHHHCCT-TCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEEC-CSSHHHHHHHHHTSHHHHH
T ss_pred HHHHHHHHhcCC-CceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeee-cCCHHHHHHHHHHHHHHHH
Confidence 999999999887 889999999999999999999999998333334444455544 4579998887765444433
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.76 E-value=1.6e-08 Score=101.20 Aligned_cols=130 Identities=17% Similarity=0.118 Sum_probs=93.2
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
+..++....++.+ +.+.+..++|+.............++.......+..... ..........+..+.
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------------~~~~~~~~~~~~~~~ 135 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS------------DRVVGYQLRQKDPKR 135 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTT------------SCEEEEECCSSSHHH
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecc------------cccccccccchhhHH
Confidence 3455666666665 578999999999999999999999986421111100000 011133344556666
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
..++.++.. .+.|+++|||.||.+||+.||+||||+ +..++.++++|++.. .++..+++.+..
T Consensus 136 ~~~~~~~i~-~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 136 QSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHT-TCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred HHHHHhccc-ccceEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 777777766 788999999999999999999999996 778888888898875 458888876543
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.70 E-value=1.5e-08 Score=104.96 Aligned_cols=141 Identities=15% Similarity=0.171 Sum_probs=96.8
Q ss_pred cHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceee-eCccccc---------------CC-----------
Q 001960 664 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAI-EGPEFRE---------------KS----------- 716 (991)
Q Consensus 664 ~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi-~g~~~~~---------------~~----------- 716 (991)
+..+++.++++.|+.+.++||++...+..+.+++++..++..+. .|..+.. ..
T Consensus 22 ~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (244)
T d1s2oa1 22 EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGF 101 (244)
T ss_dssp HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhc
Confidence 44556667788899999999999999999999999865422111 1111100 00
Q ss_pred -------------------------H---HHHhhhc----cccc--------eEeccChhhHHHHHHHHHhhcC---CEE
Q 001960 717 -------------------------D---EELSKLI----PKIQ--------VMARSSPMDKHTLVKHLRTTLG---EVV 753 (991)
Q Consensus 717 -------------------------~---~~~~~~~----~~~~--------v~ar~sP~~K~~~v~~l~~~~g---~~v 753 (991)
+ +++.+.. .... +-.-....+|...++.+.+.+| +.|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~ 181 (244)
T d1s2oa1 102 EALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQT 181 (244)
T ss_dssp TTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGE
T ss_pred ccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhE
Confidence 0 1111111 1110 1111234679999999988866 458
Q ss_pred EEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcC-------EEeccCCchHHHHHHHH
Q 001960 754 AVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD-------VIILDDNFSTIVTVAKW 805 (991)
Q Consensus 754 ~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad-------~vl~~~~~~~i~~~i~~ 805 (991)
.++|||.||.+||+.|+.|++|| ++.+..|+.|| ++-..++..++.+++++
T Consensus 182 v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 182 LVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp EEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 88999999999999999999999 88888898888 56556667788887764
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.70 E-value=8e-09 Score=103.73 Aligned_cols=134 Identities=17% Similarity=0.188 Sum_probs=93.5
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhh
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 737 (991)
..++.+++.+.++.++..|..+.++||.....+....++.++...-...+....... ... ....-..+..
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~-~~~~~~~~~~ 142 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKL---------TGD-VEGEVLKENA 142 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEE---------EEE-EECSSCSTTH
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhccccccc---------ccc-cccccccccc
Confidence 346788999999999999999999999999999999999887642111111100000 000 0000112233
Q ss_pred HHHHHHHHHhhc---CCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 001960 738 KHTLVKHLRTTL---GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 738 K~~~v~~l~~~~---g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
|...++.+.++. .+.+.++|||.||.+|++.||+|||| ++.+..++.||+++..+|+.+|++.|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 143 KGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred ccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 444444433321 35688999999999999999999999 57888899999999988898887654
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.66 E-value=1.4e-08 Score=104.70 Aligned_cols=44 Identities=9% Similarity=0.045 Sum_probs=39.2
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~ 701 (991)
.+...+.++++|++|+++|++++++||++...+..+.+++|+..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 34445778999999999999999999999999999999999864
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.41 E-value=4.2e-07 Score=92.33 Aligned_cols=42 Identities=10% Similarity=0.060 Sum_probs=38.8
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~ 700 (991)
..+.+.+++++++|+++|+.++++||++...+..+.+++|+.
T Consensus 20 ~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 20 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 346788999999999999999999999999999999999985
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.98 E-value=1.2e-06 Score=89.25 Aligned_cols=55 Identities=15% Similarity=0.288 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHhhcCCEEEEeCC----CCCChHhhhhCC-eeEEecCCCcHHHHhhcCEEe
Q 001960 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEAD-IGLAMGIAGTEVAKESADVII 791 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g~~v~~iGD----G~ND~~al~~Ad-vgiamg~~g~~~ak~~ad~vl 791 (991)
..|...++.|.+...+.|.++|| |.||.+||+.|+ .|+||+ ++.|.+|..+|+++
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~ 243 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFF 243 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcC
Confidence 67899999997764578999999 569999999997 799999 99999999999876
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.91 E-value=2.3e-06 Score=86.50 Aligned_cols=61 Identities=18% Similarity=0.378 Sum_probs=45.1
Q ss_pred hhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 001960 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
.+|...++.|.++ ..++++||+.||.+||+.|+.|+||+ +|. ++.+|++.+.+ ...+.+++
T Consensus 158 ~~Kg~al~~l~~~--~~~i~~GDs~ND~~Mf~~~~~~~av~-~g~--~~~~A~~~~~~--~~ev~~~l 218 (229)
T d1u02a_ 158 VNKGSAIRSVRGE--RPAIIAGDDATDEAAFEANDDALTIK-VGE--GETHAKFHVAD--YIEMRKIL 218 (229)
T ss_dssp CCHHHHHHHHHTT--SCEEEEESSHHHHHHHHTTTTSEEEE-ESS--SCCCCSEEESS--HHHHHHHH
T ss_pred CCHHHHHHHHhcc--ccceeecCCCChHHHHhccCCeEEEE-eCC--CCccCeEEcCC--HHHHHHHH
Confidence 6799999999876 44678899999999999997666654 332 25678999865 44554443
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.68 E-value=3.6e-05 Score=77.74 Aligned_cols=126 Identities=18% Similarity=0.219 Sum_probs=84.6
Q ss_pred CCcccHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEecc-Chhh
Q 001960 660 PMRPGVKESVAICRSAG-ITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS-SPMD 737 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aG-i~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~-sP~~ 737 (991)
++-||+.+.+++|++.| +++.++|+.....+..+.+..|+...-+.++.+.+ +..+- .|.-
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~-----------------~~~~k~~p~~ 153 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADD-----------------ALDRNELPHI 153 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTT-----------------CSSGGGHHHH
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccc-----------------cccccchhHH
Confidence 34689999999999987 89999999999999999999999754333333332 11111 1111
Q ss_pred HHHHHHHHHhh--cCCEEEEeCCCCCChHhhhhCC---eeEEecCCCcHH-HHhhcCEEeccCCchHHHHHHH
Q 001960 738 KHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEAD---IGLAMGIAGTEV-AKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 738 K~~~v~~l~~~--~g~~v~~iGDG~ND~~al~~Ad---vgiamg~~g~~~-ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
-...++.+... ..+.++||||+.+|..|-+.|+ |+|+.|....+. .+..+|+++. +++.+.+++.
T Consensus 154 ~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~--~~~el~~~l~ 224 (228)
T d2hcfa1 154 ALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHHH
T ss_pred HHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEEC--CHHHHHHHHH
Confidence 12223333211 1257999999999999999999 445555333332 4456899984 4888887764
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.59 E-value=3.6e-05 Score=77.07 Aligned_cols=125 Identities=22% Similarity=0.297 Sum_probs=86.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++++.++.|++.|+++.++|+.....+..+.+++|+...-..++.+.+.. .....|+--.
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~----------------~~kp~p~~~~ 158 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLP----------------EIKPHPAPFY 158 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSS----------------SCTTSSHHHH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccccccc----------------cccccchhhH
Confidence 468999999999999999999999999999999999999975333333332211 1122334333
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCe-eEEe--cCC-CcHHHHhhcCEEeccCCchHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAM--GIA-GTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Adv-giam--g~~-g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
.+.+.++-. .+.++|+||..+|..+-+.|++ .|.+ |.+ ..+.....+|+++.+ +..+.+++
T Consensus 159 ~~~~~~~~~-~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~--l~dL~~ii 223 (224)
T d2hsza1 159 YLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDD--FADILKIT 223 (224)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESS--GGGGGGGT
T ss_pred HHHHHhhhh-hhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECC--HHHHHHhh
Confidence 444444433 4679999999999999999986 3333 211 223455668999854 77776654
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.54 E-value=6.2e-05 Score=75.17 Aligned_cols=120 Identities=15% Similarity=0.235 Sum_probs=82.9
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.++++.|+++|+++.++|+.....+..+.+..|+...-..++.+++.. .+.-.|+-=.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~----------------~~Kp~~~~~~ 151 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLP----------------YSKPHPQVYL 151 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSS----------------CCTTSTHHHH
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccc----------------cchhhHHHHH
Confidence 456999999999999999999999999999999999999975433445444321 1122233333
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCc----HHHHhhcCEEeccCCchHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT----EVAKESADVIILDDNFSTI 799 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~----~~ak~~ad~vl~~~~~~~i 799 (991)
.+++.+.-. .+.++|+||+.+|..|-+.|++... +..+. +.....||+++.+ +..+
T Consensus 152 ~~~~~l~~~-~~~~l~igD~~~di~aA~~~G~~~i-~v~~~~~~~~~~~~~a~~~i~~--l~el 211 (218)
T d1te2a_ 152 DCAAKLGVD-PLTCVALEDSVNGMIASKAARMRSI-VVPAPEAQNDPRFVLANVKLSS--LTEL 211 (218)
T ss_dssp HHHHHHTSC-GGGEEEEESSHHHHHHHHHTTCEEE-ECCCTTTTTCGGGGGSSEECSC--GGGC
T ss_pred HHHHHcCCC-chhcEEEeeCHHHHHHHHHcCCEEE-EECCCCCccchhhcCCCEEECC--hhhC
Confidence 444444333 4679999999999999999997532 22222 2233568988755 6543
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.44 E-value=0.00012 Score=75.24 Aligned_cols=126 Identities=19% Similarity=0.196 Sum_probs=86.2
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
++.||+.++++.|++.|+++.++||.+...+..+.+..|+...- +.++.+++.. .....|..=
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~----------------~~KP~p~~~ 162 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVP----------------AGRPYPWMC 162 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSS----------------CCTTSSHHH
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccccccccccccc----------------ccccChHHH
Confidence 57899999999999999999999999999999999999986421 2333333211 122344444
Q ss_pred HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee-EEecCCCc------H---------------------HHHhhcCEE
Q 001960 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGT------E---------------------VAKESADVI 790 (991)
Q Consensus 739 ~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg-iamg~~g~------~---------------------~ak~~ad~v 790 (991)
....+.+.-...+.++||||..+|+.+=+.|++- |++. .|. + ..+..||++
T Consensus 163 ~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~v 241 (257)
T d1swva_ 163 YKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVI-LGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFT 241 (257)
T ss_dssp HHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEEC-TTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEc-cCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCEE
Confidence 4555555432235699999999999999999963 3332 221 0 011238999
Q ss_pred eccCCchHHHHHHH
Q 001960 791 ILDDNFSTIVTVAK 804 (991)
Q Consensus 791 l~~~~~~~i~~~i~ 804 (991)
+.+ +..+..+|+
T Consensus 242 i~~--l~eL~~ii~ 253 (257)
T d1swva_ 242 IET--MQELESVME 253 (257)
T ss_dssp ESS--GGGHHHHHH
T ss_pred ECC--HHHHHHHHH
Confidence 954 888887764
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.20 E-value=0.0003 Score=73.29 Aligned_cols=136 Identities=15% Similarity=0.200 Sum_probs=82.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeee-CcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIE-GPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~-g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
++|||+++.++.|++.|+.+.++||--...+.++++++|+..++..++. .-++.. +.+.--+..- + .....|
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~---~~~~~~~~~~-~---i~~~~K 207 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDE---NGVLKGFKGE-L---IHVFNK 207 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECT---TSBEEEECSS-C---CCTTCH
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeC---CeeEeeccCC-c---cccccC
Confidence 5899999999999999999999999999999999999999754322221 111110 0000000000 0 112233
Q ss_pred HHHH----HHHHhh-cCCEEEEeCCCCCChHhhhh---CCeeEEecC-CC-cH----HHHhhcCEEeccCCchHHHHH
Q 001960 739 HTLV----KHLRTT-LGEVVAVTGDGTNDAPALHE---ADIGLAMGI-AG-TE----VAKESADVIILDDNFSTIVTV 802 (991)
Q Consensus 739 ~~~v----~~l~~~-~g~~v~~iGDG~ND~~al~~---Advgiamg~-~g-~~----~ak~~ad~vl~~~~~~~i~~~ 802 (991)
...+ ...+.. ....|.++|||.||.+|.+. ++..++.|- +. .+ .-.++-|+|+.+|.-..++..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~v~~~ 285 (291)
T d2bdua1 208 HDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNS 285 (291)
T ss_dssp HHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCHHHHH
T ss_pred cchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChhHHHH
Confidence 3222 111221 13578899999999999874 344444442 11 11 133678999988775555543
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.09 E-value=0.00015 Score=71.83 Aligned_cols=118 Identities=15% Similarity=0.128 Sum_probs=81.4
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.+++.+.++.++..| ++.++|+.....+..+.+..|+...-+.++.+.+ .+..|-
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~----------------------~~~~~p 140 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSP----------------------EAPHKA 140 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECS----------------------SCCSHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccccccccccc----------------------cccccc
Confidence 56789999999998775 8999999999999999999999754333332222 223333
Q ss_pred HHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCe---eEEecCCCcHH-HHhhcCEEeccCCchHHHHH
Q 001960 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAGTEV-AKESADVIILDDNFSTIVTV 802 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Adv---giamg~~g~~~-ak~~ad~vl~~~~~~~i~~~ 802 (991)
.+++...+++| +.++||||+.||..|-+.|++ +|.-|....+. ....+|+++.+ +..+.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~--l~el~~~ 208 (210)
T d2ah5a1 141 DVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLAY 208 (210)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHHH
T ss_pred cccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECC--HHHHHHH
Confidence 34444333323 578999999999999999997 44334222333 33458999855 7777654
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.96 E-value=0.0011 Score=66.48 Aligned_cols=125 Identities=16% Similarity=0.170 Sum_probs=81.4
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.++++.|+ +|+++.++|+........+.+.+|+...-+.++...+.. ...-.|+-=.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~----------------~~KP~~~~~~ 162 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAG----------------FFKPHPRIFE 162 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHT----------------BCTTSHHHHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccccccccccccc----------------ccchhhHHHH
Confidence 46799999999996 589999999999999999999999864322222221110 1111222212
Q ss_pred HHHHHHHhhcCCEEEEeCCC-CCChHhhhhCCeeEE-ecC-CCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDG-TNDAPALHEADIGLA-MGI-AGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG-~ND~~al~~Advgia-mg~-~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
.+++.+.-. .+.++++||. .+|..+-+.|++-.. +.- .........+|+++.+ +..+.++++
T Consensus 163 ~~~~~l~~~-p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~ 227 (230)
T d1x42a1 163 LALKKAGVK-GEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSD--LREVIKIVD 227 (230)
T ss_dssp HHHHHHTCC-GGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESS--TTHHHHHHH
T ss_pred HHHhhhccc-ccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECC--HHHHHHHHH
Confidence 233333222 3569999997 689999888987532 211 1222345678999866 898888775
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.86 E-value=8.4e-05 Score=75.00 Aligned_cols=51 Identities=20% Similarity=0.365 Sum_probs=36.5
Q ss_pred hhHHHHHHHHHhhcCCEEEEeCC----CCCChHhhhhCC-eeEEecCCCcHHHHhhcC
Q 001960 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEAD-IGLAMGIAGTEVAKESAD 788 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g~~v~~iGD----G~ND~~al~~Ad-vgiamg~~g~~~ak~~ad 788 (991)
.+|...++.|.....+.|+++|| |.||.+||+.|+ .|++++ +..| .++.++
T Consensus 184 vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~~~~-~~~~~~ 239 (243)
T d2amya1 184 WDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APED-TRRICE 239 (243)
T ss_dssp CSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHH-HHHHHH
T ss_pred cCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeC-CHHH-HHHHHH
Confidence 57887777776543478999999 789999999998 688776 5444 454443
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.73 E-value=0.00084 Score=65.85 Aligned_cols=119 Identities=18% Similarity=0.184 Sum_probs=76.4
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||++++++.|++.|+++.++|+... .+..+.+..|+...-+.++..++. ......|+--.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~----------------~~~Kp~~~~~~ 144 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSG----------------FVRKPSPEAAT 144 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGC----------------CCCTTSSHHHH
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccccccccccc----------------cccchhHHHHH
Confidence 4679999999999999999999998664 556778889986432222222211 11122333334
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeE-EecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL-AMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgi-amg~~g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
.+++.+.-. .+.++||||+.+|..+-+.|++.. .+. .+. ..+|..+.+ +..+.+++
T Consensus 145 ~~~~~~~~~-p~~~l~VgD~~~Di~~A~~~G~~~i~v~-~~~----~~~~~~~~~--~~dl~~l~ 201 (204)
T d2go7a1 145 YLLDKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFL-EST----YEGNHRIQA--LADISRIF 201 (204)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESS-CCS----CTTEEECSS--TTHHHHHT
T ss_pred HHHHHhCCC-CceEEEEeCCHHHHHHHHHcCCeEEEEc-CCC----CCcCeecCC--HHHHHHHh
Confidence 444444332 367999999999999999999853 343 332 235665533 66665543
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.63 E-value=0.00029 Score=69.60 Aligned_cols=121 Identities=12% Similarity=0.224 Sum_probs=80.8
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|+ +++++.++|+.....+..+.+..|+...-..++.+.+.. ...-.|+--.
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~p~~~~ 144 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTP----------------KRKPDPLPLL 144 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSS----------------CCTTSSHHHH
T ss_pred ccccchhhhhhhhc-ccccccccccccccccccccccccccccccccccccccc----------------cchhhhhhhc
Confidence 35689999999997 579999999999999999999999865322333222211 1112233333
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEe---cCCCcHHHHhhcCEEeccCCchHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM---GIAGTEVAKESADVIILDDNFSTIVT 801 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiam---g~~g~~~ak~~ad~vl~~~~~~~i~~ 801 (991)
.+++.++-. .+.++||||+.+|..+-+.|++.... | ..+....+.+|+++. ++..|.+
T Consensus 145 ~~~~~~~~~-~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i~--~l~dll~ 205 (207)
T d2hdoa1 145 TALEKVNVA-PQNALFIGDSVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRFQ--KPLDILE 205 (207)
T ss_dssp HHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEES--SGGGGGG
T ss_pred ccccceeee-ccceeEecCCHHHHHHHHHcCCeEEEEecC-CCChhHhhhcCcEeC--CHHHHHh
Confidence 444443322 25789999999999999999987553 3 233334567888874 3666543
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.62 E-value=0.0028 Score=61.15 Aligned_cols=135 Identities=16% Similarity=0.140 Sum_probs=74.8
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHH---------------HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcc
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINT---------------AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP 725 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~t---------------a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~ 725 (991)
+-||+.++++.|+++|+++.++|...... ........|+... ...+......... ....
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~cp~~p~~~~-----~~~~ 101 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD-GIYYCPHHPQGSV-----EEFR 101 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS-EEEEECCBTTCSS-----GGGB
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccccc-ceeeccccccccc-----cccc
Confidence 45899999999999999999999976311 1111222222211 0000000000000 0000
Q ss_pred ccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee--EEe--cCCCcHHHHhhcCEEeccCCchHHHH
Q 001960 726 KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG--LAM--GIAGTEVAKESADVIILDDNFSTIVT 801 (991)
Q Consensus 726 ~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg--iam--g~~g~~~ak~~ad~vl~~~~~~~i~~ 801 (991)
+...+..-.|.-=..+.+.+.-. .+.+.||||..+|..|=+.|+++ +.+ |..-.+.....||+++.+ +..+++
T Consensus 102 ~~~~~rKP~p~m~~~~~~~~~i~-~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~--l~dl~~ 178 (182)
T d2gmwa1 102 QVCDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNS--LADLPQ 178 (182)
T ss_dssp SCCSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESC--GGGHHH
T ss_pred ccccccCCccccccchhhhcccc-cccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECC--HHHHHH
Confidence 00011122333333444444333 35689999999999999999985 333 322234566779999855 888888
Q ss_pred HHH
Q 001960 802 VAK 804 (991)
Q Consensus 802 ~i~ 804 (991)
+|+
T Consensus 179 ~ik 181 (182)
T d2gmwa1 179 AIK 181 (182)
T ss_dssp HHH
T ss_pred Hhc
Confidence 775
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.57 E-value=0.0015 Score=65.69 Aligned_cols=120 Identities=17% Similarity=0.157 Sum_probs=78.7
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhh
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 737 (991)
.-.+.||+.+.+++|++.|+++.++|+............+|+..-........+ .....+-.|+-
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d---------------~~~~~KP~p~~ 189 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFD---------------TKIGHKVESES 189 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEEC---------------GGGCCTTCHHH
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeec---------------cccccCCCcHH
Confidence 345689999999999999999999999999999999999987532111000000 00112233333
Q ss_pred HHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEe----cCCCcHHHHhhcCEEecc
Q 001960 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVAKESADVIILD 793 (991)
Q Consensus 738 K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiam----g~~g~~~ak~~ad~vl~~ 793 (991)
=....+.+.-. .+.++||||..+|+.+-++|++-... |.....-....++.++.+
T Consensus 190 ~~~~~~~~~~~-p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~s 248 (253)
T d1zs9a1 190 YRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITS 248 (253)
T ss_dssp HHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESS
T ss_pred HHHHHHHhCCC-cCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECC
Confidence 33444444333 36799999999999999999986544 323333344566777754
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=96.51 E-value=0.0046 Score=56.46 Aligned_cols=107 Identities=19% Similarity=0.294 Sum_probs=69.8
Q ss_pred cCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeec
Q 001960 524 LGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVP 603 (991)
Q Consensus 524 ~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~ 603 (991)
+.||..+|++++|++.+..... .....-....||....+..++.+ . +. .+..|++..+...... .|..
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~--~-g~--~v~~G~~~~~~~~~~~----~g~~-- 96 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRER-DVQSLHATFVPFTAQSRMSGINI--D-NR--MIRKGSVDAIRRHVEA----NGGH-- 96 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCC-CTTTTTCEEEEEETTTTEEEEEE--T-TE--EEEEECHHHHHHHHHH----HTCC--
T ss_pred CCchHHHHHHHHHHHhcCCCcc-ccccccccccccccccceEEEEE--C-CE--EEEecHHHHHHHHHHH----cCCC--
Confidence 7799999999999876533211 11223334567777766555432 2 22 3456888776543321 1111
Q ss_pred CCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCc
Q 001960 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMR 662 (991)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr 662 (991)
++ ..+.+.+++++.+|..++.+| .|.+++|++++.|+++
T Consensus 97 ~~----~~~~~~~~~~~~~G~Tvv~Va----------------~d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 97 FP----TDVDQKVDQVARQGATPLVVV----------------EGSRVLGVIALKDIVK 135 (136)
T ss_dssp CC----HHHHHHHHHHHHTTSEEEEEE----------------ETTEEEEEEEEEESSC
T ss_pred Cc----HHHHHHHHHHHHCCCeEEEEE----------------ECCEEEEEEEEEeecC
Confidence 22 246677889999999999888 4668999999999986
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.26 E-value=0.0031 Score=60.81 Aligned_cols=109 Identities=15% Similarity=0.076 Sum_probs=71.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+++.++.|++.|+++.++|+-+.... .+.+..|+...-+.++.+.+.. ...-.|+--.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~----------------~~KP~p~~~~ 141 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGF----------------KRKPNPESML 141 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCC----------------CCTTSCHHHH
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhcccccccccccccccc----------------ccCCCHHHHH
Confidence 4679999999999999999999999776554 5678888864322233222211 0111222222
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCE
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV 789 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~ 789 (991)
.+.+.+. -+.+++|||..+|..+-++|++-... .++.+..++.-|+
T Consensus 142 ~~~~~~~---~~~~l~vgDs~~Di~aA~~aG~~~i~-v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 142 YLREKYQ---ISSGLVIGDRPIDIEAGQAAGLDTHL-FTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHTT---CSSEEEEESSHHHHHHHHHTTCEEEE-CSCHHHHHHHHTC
T ss_pred HHHHHcC---CCCeEEEeCCHHHHHHHHHcCCEEEE-ECCCCChHhhcCC
Confidence 2223222 24589999999999999999887543 3666666776653
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.20 E-value=0.003 Score=59.68 Aligned_cols=89 Identities=11% Similarity=0.034 Sum_probs=61.2
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~-~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
++.||+.++++.|+++|+++.++|+-+ ...+..+-+..++...... +.+...|..+
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~-----------------------~~~~~kp~~~ 102 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQ-----------------------REIYPGSKVT 102 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSE-----------------------EEESSSCHHH
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhccccccccee-----------------------eecccCCChH
Confidence 578999999999999999999999654 5566777777776532111 2222233322
Q ss_pred --HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee
Q 001960 739 --HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (991)
Q Consensus 739 --~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg 772 (991)
..+.+.+.-. .+.++|+||..+|..+-+.|++-
T Consensus 103 ~~~~~~~~~~~~-~~~~l~igD~~~di~aA~~aG~~ 137 (164)
T d1u7pa_ 103 HFERLHHKTGVP-FSQMVFFDDENRNIIDVGRLGVT 137 (164)
T ss_dssp HHHHHHHHHCCC-GGGEEEEESCHHHHHHHHTTTCE
T ss_pred HHHHHHHHhCCC-hHHEEEEcCCHHHHHHHHHcCCE
Confidence 2233333222 36799999999999999999874
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=95.98 E-value=0.0073 Score=55.61 Aligned_cols=99 Identities=14% Similarity=0.153 Sum_probs=61.9
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhh--ccccceE-----
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKL--IPKIQVM----- 730 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~--~~~~~v~----- 730 (991)
+|++.|++.+.++.|+++|++++++||.+......+.+.++.. ....... .+....+
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~----------------~~~~~~~~~~~~~~~~~~~~~ 97 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMT----------------RKWVEDIAGVPLVMQCQREQG 97 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHH----------------HHHHHHTTCCCCSEEEECCTT
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHH----------------hhhhhhcCCCcEEEeeccccc
Confidence 6889999999999999999999999998742111111100000 0000000 0000011
Q ss_pred -eccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee
Q 001960 731 -ARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (991)
Q Consensus 731 -ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg 772 (991)
.|..+.-|..+.+.+.....++++|+||...|+.|.+++++-
T Consensus 98 ~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 98 DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 122346677777777655346788999999999999999875
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.94 E-value=0.0087 Score=60.05 Aligned_cols=125 Identities=12% Similarity=0.112 Sum_probs=80.6
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHH
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~ 740 (991)
+.||+.++++.|+ .|+++.++|+..........+.+|+...-+.++.+.+.. .+.-+|+==..
T Consensus 110 ~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~----------------~~KP~p~~~~~ 172 (247)
T d2gfha1 110 LADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQK----------------EEKPAPSIFYH 172 (247)
T ss_dssp CCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSS----------------SCTTCHHHHHH
T ss_pred cCccHHHHHHHhh-cccceEEeecccchhhhhhhhhccccccccccccccccc----------------cchhhhhhHHH
Confidence 5799999999998 589999999999999999999999865333333332211 01111211122
Q ss_pred HHHHHHhhcCCEEEEeCCCC-CChHhhhhCCeeEEecCCCc----HHHHhhcCEEeccCCchHHHHHHHH
Q 001960 741 LVKHLRTTLGEVVAVTGDGT-NDAPALHEADIGLAMGIAGT----EVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 741 ~v~~l~~~~g~~v~~iGDG~-ND~~al~~Advgiamg~~g~----~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
+.+.+.-. .+.++||||.. +|+.+-+.|++.-....++. +.....+|+++.+ +..+.++++.
T Consensus 173 ~~~~~~~~-~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~--l~eL~~ll~~ 239 (247)
T d2gfha1 173 CCDLLGVQ-PGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSS--VLELPALLQS 239 (247)
T ss_dssp HHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESS--GGGHHHHHHH
T ss_pred HHHHhhcC-HHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECC--HHHHHHHHHH
Confidence 23333222 25689999995 89999999998632211111 1123447898865 8888887753
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=95.30 E-value=0.012 Score=57.78 Aligned_cols=125 Identities=9% Similarity=0.049 Sum_probs=84.4
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
..+.+++.++++.+++.|+++.++|+-.......+.+..++...-+.++...+.. ...-.|+-=
T Consensus 92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~----------------~~KP~p~~~ 155 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQ----------------VYKPDNRVY 155 (220)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGT----------------CCTTSHHHH
T ss_pred ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeee----------------ccccHHHHH
Confidence 3456899999999999999999999999999999999988875444444443321 112223332
Q ss_pred HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecC---CCcHHHHhhcCEEeccCCchHHHHH
Q 001960 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI---AGTEVAKESADVIILDDNFSTIVTV 802 (991)
Q Consensus 739 ~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~---~g~~~ak~~ad~vl~~~~~~~i~~~ 802 (991)
..+.+.+.-. .+.++||||..+|+.+-++|++--..-. ...+-....+|+++.+ +..+.++
T Consensus 156 ~~~~~~~g~~-p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~--l~el~~l 219 (220)
T d1zrna_ 156 ELAEQALGLD-RSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTS--LRAVVEL 219 (220)
T ss_dssp HHHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESS--HHHHHTT
T ss_pred HHHHHHhCCC-CceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECC--HHHHHhh
Confidence 3334444323 3579999999999999999997754321 1122233458998854 7777653
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.22 E-value=0.04 Score=53.52 Aligned_cols=139 Identities=19% Similarity=0.291 Sum_probs=93.6
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccC--CH------------------HHH
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREK--SD------------------EEL 720 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~--~~------------------~~~ 720 (991)
+-||+.++++.+++. ....++|---.+-+.++|+..|+.. ...-+.-+++.+ .. +++
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~--e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel 158 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRG--ELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 158 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCS--EEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCc--eeecccccccccCCChHHHHHHHHHhhhccCccHHHH
Confidence 358999999999876 6788888888899999999999952 222233333322 11 222
Q ss_pred hh-------------hccccceEeccChhhHHHHHHHHHhhcC-CEEEEeCCCCCChHhhhhCCe--eEEecCCCcHHHH
Q 001960 721 SK-------------LIPKIQVMARSSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADI--GLAMGIAGTEVAK 784 (991)
Q Consensus 721 ~~-------------~~~~~~v~ar~sP~~K~~~v~~l~~~~g-~~v~~iGDG~ND~~al~~Adv--giamg~~g~~~ak 784 (991)
.+ ++.+++..+ -..|..+++..-...+ ...+++||++.|..||+.|.= |+|+.-||.+=+.
T Consensus 159 ~e~~d~~f~~~e~~~i~e~Vk~VG---gg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal 235 (308)
T d1y8aa1 159 FRKLDELFSRSEVRKIVESVKAVG---AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYAL 235 (308)
T ss_dssp HHHHHHHHHSHHHHHHHHTCBCCC---HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHH
T ss_pred HHHHHHHhccchHhhHHhhhcccC---CchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccccc
Confidence 22 112222222 2567777665443323 335889999999999998832 5555558999999
Q ss_pred hhcCEEeccCCchHHHHHHHH
Q 001960 785 ESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 785 ~~ad~vl~~~~~~~i~~~i~~ 805 (991)
..||+++.+.+-..+..++..
T Consensus 236 ~eA~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 236 KHADVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp TTCSEEEECSSTHHHHHHHHH
T ss_pred cccceEEeccchhHHHHHHHH
Confidence 999999999887777766543
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=95.02 E-value=0.014 Score=59.00 Aligned_cols=34 Identities=18% Similarity=0.287 Sum_probs=28.4
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Q 001960 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARE 696 (991)
Q Consensus 663 ~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~ 696 (991)
|++.++|+.|+++|++++++|+....+...+++.
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~ 54 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQR 54 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHH
Confidence 7899999999999999999998776666665554
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=94.36 E-value=0.022 Score=55.77 Aligned_cols=114 Identities=11% Similarity=0.110 Sum_probs=72.9
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhh
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 737 (991)
..++-||+.+.++.|++.|+++.++|+... +....+..|+...-..++.+.+.. ...-.|+-
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~~~~ 150 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDAIADPAEVA----------------ASKPAPDI 150 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSEECCTTTSS----------------SCTTSTHH
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccccccccccccc----------------ccccChHH
Confidence 456789999999999999999999999764 567788889876444444443321 11222222
Q ss_pred HHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCe-eEEecCCCcHHHHhhcCEEecc
Q 001960 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMGIAGTEVAKESADVIILD 793 (991)
Q Consensus 738 K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Adv-giamg~~g~~~ak~~ad~vl~~ 793 (991)
=..+.+.+.-. .+.++||||..+|+.+-+.|++ .|.++ . ......++.++.+
T Consensus 151 ~~~~l~~~~i~-~~~~l~VgD~~~di~~A~~aG~~~i~v~-~--~~~~~~~~~~~~~ 203 (221)
T d1o08a_ 151 FIAAAHAVGVA-PSESIGLEDSQAGIQAIKDSGALPIGVG-R--PEDLGDDIVIVPD 203 (221)
T ss_dssp HHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEES-C--HHHHCSSSEEESS
T ss_pred HHHHHHHcCCC-CceEEEEecCHHHHHHHHHcCCEEEEEC-C--hhhcccccEEcCC
Confidence 12222222222 3568999999999999999987 34443 2 2223446666543
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.87 E-value=0.032 Score=54.41 Aligned_cols=105 Identities=12% Similarity=0.155 Sum_probs=67.8
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCC----CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccCh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGD----NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD----~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (991)
.++|++.+.++.|+++|+++.++|+- ............|+...-+.++.+++. -...-.|
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~----------------~~~KP~p 160 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQV----------------GMIKPEP 160 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHH----------------SCCTTCH
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhc----------------cCCCCCh
Confidence 46799999999999999999999963 333444555566664322233332221 1122345
Q ss_pred hhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCe-eEEecCCCcHH
Q 001960 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMGIAGTEV 782 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Adv-giamg~~g~~~ 782 (991)
+--....+.++-. .+.++||||..+|+.+-+.|++ +|-+. ++.+.
T Consensus 161 ~~~~~~~~~~~v~-p~~~l~IgD~~~Di~~A~~aG~~ti~V~-~~~~~ 206 (222)
T d1cr6a1 161 QIYNFLLDTLKAK-PNEVVFLDDFGSNLKPARDMGMVTILVH-NTASA 206 (222)
T ss_dssp HHHHHHHHHHTSC-TTSEEEEESSSTTTHHHHHHTCEEEECC-SSSHH
T ss_pred HHHHHHHHHhCCC-cceEEEEECCHHHHHHHHHcCCEEEEEC-CcchH
Confidence 5555556655544 4678999999999999999997 44443 44444
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=93.85 E-value=0.098 Score=52.57 Aligned_cols=41 Identities=15% Similarity=0.091 Sum_probs=32.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCccC
Q 001960 662 RPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILTD 702 (991)
Q Consensus 662 r~~v~~~I~~l~~aGi~v~mlTG---D~~~ta~~ia~~~gi~~~ 702 (991)
=|++.++++.|+++|++++++|+ ..........+++|+...
T Consensus 25 i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~~~ 68 (261)
T d1vjra_ 25 LPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVP 68 (261)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCC
T ss_pred CchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhccccc
Confidence 37999999999999999999985 455555666667887543
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=93.51 E-value=0.018 Score=55.81 Aligned_cols=85 Identities=18% Similarity=0.205 Sum_probs=61.1
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCC----HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccC--
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDN----INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS-- 734 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~----~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s-- 734 (991)
+-|++.+.++.+++.|++|+.+||+. ..|+..+-+.+|+...+.. ..++.+..
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~---------------------~vll~~~~~~ 145 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMN---------------------PVIFAGDKPG 145 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBC---------------------CCEECCCCTT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCccccc---------------------ceEeeCCCCC
Confidence 45799999999999999999999986 4577777788898643210 00222222
Q ss_pred hhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCe
Q 001960 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771 (991)
Q Consensus 735 P~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Adv 771 (991)
...|...++ + -++++++||..+|..+-.+|++
T Consensus 146 K~~rr~~Ik----~-y~I~l~~GD~l~Df~aA~eagi 177 (209)
T d2b82a1 146 QNTKSQWLQ----D-KNIRIFYGDSDNDITAARDVGA 177 (209)
T ss_dssp CCCSHHHHH----H-TTEEEEEESSHHHHHHHHHTTC
T ss_pred chHHHHHHH----H-cCeEEEecCCHHHHhHHHHcCC
Confidence 234555553 2 3689999999999999999985
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=92.83 E-value=0.054 Score=52.91 Aligned_cols=25 Identities=36% Similarity=0.538 Sum_probs=23.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcC
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTG 684 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTG 684 (991)
.+-||+.++++.|+++|+++.++|.
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTN 72 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTN 72 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred EecccHHHHHHHHHhhCCeEEEecc
Confidence 4679999999999999999999995
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=92.55 E-value=0.2 Score=49.22 Aligned_cols=124 Identities=12% Similarity=0.145 Sum_probs=80.8
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++-+++.+++++|+ |+.+.++|..+...+..+-+..|+...-+.++.+.+.. ...-.|+-=.
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~----------------~~KP~p~~f~ 154 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKR----------------VFKPHPDSYA 154 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGT----------------CCTTSHHHHH
T ss_pred ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccccccccccccc----------------ccCccHHHHH
Confidence 56688999999885 78999999999999999999999876544455444321 1122222223
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE-ecCCCcHH-------------------------HHhhcCEEecc
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-MGIAGTEV-------------------------AKESADVIILD 793 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia-mg~~g~~~-------------------------ak~~ad~vl~~ 793 (991)
..++.+.-. .+.+++|||..+|+.+=++|++--. +.-.+.+. .....|+++.+
T Consensus 155 ~a~~~lg~~-p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~ 233 (245)
T d1qq5a_ 155 LVEEVLGVT-PAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPA 233 (245)
T ss_dssp HHHHHHCCC-GGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESS
T ss_pred HHHHHhCCC-hhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECC
Confidence 333444333 3569999999999999999986422 21111110 01247999955
Q ss_pred CCchHHHHHHH
Q 001960 794 DNFSTIVTVAK 804 (991)
Q Consensus 794 ~~~~~i~~~i~ 804 (991)
+..+..+++
T Consensus 234 --l~el~~lv~ 242 (245)
T d1qq5a_ 234 --LGDLPRLVR 242 (245)
T ss_dssp --GGGHHHHHH
T ss_pred --HHHHHHHHH
Confidence 999998775
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=92.43 E-value=0.04 Score=55.40 Aligned_cols=44 Identities=14% Similarity=0.145 Sum_probs=32.6
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCccC
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILTD 702 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTG---D~~~ta~~ia~~~gi~~~ 702 (991)
+.+=|++.++|+.|+++|++++++|+ .........-+++|+..+
T Consensus 18 ~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~ 64 (250)
T d2c4na1 18 NVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVP 64 (250)
T ss_dssp TEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCC
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccccc
Confidence 33347899999999999999999984 445555555567787543
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=91.82 E-value=0.11 Score=50.45 Aligned_cols=122 Identities=11% Similarity=0.144 Sum_probs=75.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc-eeeeCcccccCCHHHHhhhccccceEeccChhh-
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG-IAIEGPEFREKSDEELSKLIPKIQVMARSSPMD- 737 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~-~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~- 737 (991)
.+.|++.+.+++|+ .+..++|+-....+..+-..+|+...-. .+..+.+.. ..+..|..
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~~~~KP~~~ 145 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLG----------------ADRVKPKPD 145 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHC----------------TTCCTTSSH
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccceeeccccccc----------------ccccccCHH
Confidence 45778888877665 4567899999999999999999975311 111111100 01123322
Q ss_pred -HHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee-EEecCCCc--------HHHHhhcCEEeccCCchHHHHHHH
Q 001960 738 -KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGT--------EVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 738 -K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg-iamg~~g~--------~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
=....+.+.-. .+.++||||..+|+.+-+.|++- |.+. .+. +.....+|+++.+ +..+..++.
T Consensus 146 ~~~~~~~~l~~~-p~~~l~vgDs~~dv~aA~~aG~~~i~v~-~~~~~~~~~~~~l~~~~ad~vi~~--l~eL~~ll~ 218 (222)
T d2fdra1 146 IFLHGAAQFGVS-PDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVISR--MQDLPAVIA 218 (222)
T ss_dssp HHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHHH
T ss_pred HHHHHHHhhCCC-CceEEEEcCCHHHHHHHHHcCCEEEEEc-cCCCCCcchHHHHHhCCCCEEECC--HHHHHHHHH
Confidence 22333333322 36799999999999999999963 3332 221 1123359999965 888876653
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=89.63 E-value=0.2 Score=50.05 Aligned_cols=34 Identities=15% Similarity=0.200 Sum_probs=26.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Q 001960 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIAR 695 (991)
Q Consensus 662 r~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~ 695 (991)
=|++.++|+.|+++|++++++|+....+...+++
T Consensus 20 i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~ 53 (253)
T d1wvia_ 20 IPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQE 53 (253)
T ss_dssp CHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHH
T ss_pred CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHH
Confidence 3889999999999999999999754443333333
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.54 E-value=0.094 Score=50.58 Aligned_cols=99 Identities=13% Similarity=0.190 Sum_probs=57.7
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHH----HHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccCh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTA----KAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta----~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (991)
++.|++.+.++.|++.|+++.++|....... ...-...++...-+.++.+.+.. ...-.|
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~----------------~~KP~~ 162 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVG----------------MVKPEP 162 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHT----------------CCTTCH
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccc----------------cchhHH
Confidence 3578999999999999999999997543322 22222233322111222221110 011222
Q ss_pred hhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCe-eEEe
Q 001960 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAM 775 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Adv-giam 775 (991)
+-=..+++.+.-. .+.++||||...|+.+-++|++ +|.+
T Consensus 163 ~~~~~~~~~~~~~-p~e~l~VgD~~~Di~~A~~~G~~ti~v 202 (225)
T d1zd3a1 163 QIYKFLLDTLKAS-PSEVVFLDDIGANLKPARDLGMVTILV 202 (225)
T ss_dssp HHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHhhhcccC-ccceeEEecCHHHHHHHHHcCCEEEEE
Confidence 2223334444322 2568899999999999999998 4544
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=87.76 E-value=0.081 Score=49.28 Aligned_cols=26 Identities=27% Similarity=0.456 Sum_probs=23.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCC
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGD 685 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD 685 (991)
.+-|++.++++.|+++|+++.++|..
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred eECccHHHHHHHHHHcCCceeeeccc
Confidence 45689999999999999999999975
|
| >d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.75 E-value=0.0085 Score=47.96 Aligned_cols=55 Identities=16% Similarity=0.230 Sum_probs=47.2
Q ss_pred ccchhhhHHHHHhhhhhhhHHHHhhhhhhhhhhcccCCCCccccccccccCCcccCh
Q 001960 44 NLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICP 100 (991)
Q Consensus 44 ~l~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 100 (991)
.+..+.|+.+.+.+++.+++||+.+.++.+.|++. ..+..++.+.++++||++..
T Consensus 16 ~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~--~~~~~~i~~~i~~~Gy~a~l 70 (72)
T d2aw0a_ 16 SCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPL--LTSPETLRGAIEDMGFDATL 70 (72)
T ss_dssp HHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTT--TCCHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCC--CCCHHHHHHHHHhhCCCcEe
Confidence 46677899999999999999999999999999765 45677888999999998753
|
| >d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Enterococcus hirae [TaxId: 1354]
Probab=86.12 E-value=0.013 Score=46.25 Aligned_cols=54 Identities=19% Similarity=0.210 Sum_probs=46.6
Q ss_pred ccchhhhHHHHHhhhhhhhHHHHhhhhhhhhhhcccCCCCccccccccccCCcccC
Q 001960 44 NLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQIC 99 (991)
Q Consensus 44 ~l~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 99 (991)
.+..+.|+.+.+.+++.+++|++.+.++.+.|++. ..+..++.+.++.+||++.
T Consensus 13 ~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~--~~~~~~i~~~i~~~Gy~a~ 66 (68)
T d1cpza_ 13 HCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEA--NVQATEICQAINELGYQAE 66 (68)
T ss_dssp SHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTT--TCCHHHHHHHHHTTSSCEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCC--CCCHHHHHHHHHhhCCCcE
Confidence 45677889999999999999999999999999765 4567789999999999764
|
| >d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Bacillus subtilis, CopZ [TaxId: 1423]
Probab=83.18 E-value=0.023 Score=44.84 Aligned_cols=54 Identities=11% Similarity=0.177 Sum_probs=46.5
Q ss_pred ccchhhhHHHHHhhhhhhhHHHHhhhhhhhhhhcccCCCCccccccccccCCcccC
Q 001960 44 NLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQIC 99 (991)
Q Consensus 44 ~l~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 99 (991)
.+..+.|+.+.+.+++.+++|++...++.+.|++. ..+..++...++..||++.
T Consensus 15 ~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~--~~~~~~i~~~i~~~Gy~~~ 68 (69)
T d2qifa1 15 HCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDAD--KVSVKDIADAIEDQGYDVA 68 (69)
T ss_dssp HHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTT--TCCHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCC--CCCHHHHHHHHHHhCCccc
Confidence 45677889999999999999999999999999765 4567788889999999874
|
| >d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.78 E-value=0.021 Score=47.06 Aligned_cols=57 Identities=14% Similarity=0.212 Sum_probs=49.0
Q ss_pred ccchhhhHHHHHhhhhhhhHHHHhhhhhhhhhhcccCCCCccccccccccCCcccChhh
Q 001960 44 NLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDE 102 (991)
Q Consensus 44 ~l~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 102 (991)
.+..+.|+.+.+.+++..++||+.+.++.+.|++. ..+...+.+.++.+||.+...+
T Consensus 22 ~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~--~~~~~~i~~~I~~~Gy~a~~~~ 78 (84)
T d1q8la_ 22 SCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPH--LISVEEMKKQIEAMGFPAFVKK 78 (84)
T ss_dssp SSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTT--TCCHHHHHHHHHHTTCCEECSC
T ss_pred HHHHHHHHHHhcCCCceEEEEECCCCEEceeeccc--ccCHHHHHHHHHHhCCccEEcC
Confidence 57788899999999999999999999999999876 4667788899999999866543
|
| >d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Mercuric ion binding protein MerP species: Ralstonia metallidurans CH34 [TaxId: 266264]
Probab=81.96 E-value=0.022 Score=45.46 Aligned_cols=55 Identities=15% Similarity=0.137 Sum_probs=47.2
Q ss_pred ccchhhhHHHHHhhhhhhhHHHHhhhhhhhhhhcccCCCCccccccccccCCcccCh
Q 001960 44 NLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICP 100 (991)
Q Consensus 44 ~l~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 100 (991)
.+..+.|+.+.+.+++..++|++...++.+.|++. ..+..++.+.+++.||.+..
T Consensus 16 ~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~--~~~~~~i~~~i~~~Gy~a~v 70 (72)
T d1osda_ 16 ACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDA--KTSVQKLTKATADAGYPSSV 70 (72)
T ss_dssp THHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETT--TCCHHHHHHHHHHTTCCCEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCC--CCCHHHHHHHHHhcCCCeEe
Confidence 45677889999999999999999999999999765 45677888999999998764
|
| >d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper transporter domain ccc2a species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=81.37 E-value=0.023 Score=45.28 Aligned_cols=55 Identities=7% Similarity=0.170 Sum_probs=46.7
Q ss_pred hccchhhhHHHHHhhhhhhhHHHHhhhhhhhhhhcccCCCCccccccccccCCcccCh
Q 001960 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICP 100 (991)
Q Consensus 43 ~~l~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 100 (991)
..+..+.|+.+.+.+++..++||+...++.+.|++. .+..++.+.++.+||++..
T Consensus 14 ~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~---~~~~~i~~~i~~~Gy~a~~ 68 (72)
T d2ggpb1 14 SACTNTINTQLRALKGVTKCDISLVTNECQVTYDNE---VTADSIKEIIEDCGFDCEI 68 (72)
T ss_dssp STTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSS---CCHHHHHHHHHHTTCCCEE
T ss_pred HHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCC---CCHHHHHHHHHHhCCCeEE
Confidence 356778899999999999999999999999998643 4567888999999998754
|
| >d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Probab=80.37 E-value=0.027 Score=44.91 Aligned_cols=53 Identities=11% Similarity=0.193 Sum_probs=45.5
Q ss_pred ccchhhhHHHHHhhhhhhhHHHHhhhhhhhhhhcccCCCCccccccccccCCccc
Q 001960 44 NLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQI 98 (991)
Q Consensus 44 ~l~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 98 (991)
.+..+.|+.+.+.+++.+++|++.++++.+.|++. ..+..++...++++||.+
T Consensus 19 ~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~--~~~~~~i~~~i~~~Gy~v 71 (72)
T d1p6ta1 19 ACAARIEKGLKRMPGVTDANVNLATETVNVIYDPA--ETGTAAIQEKIEKLGYHV 71 (72)
T ss_dssp HHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTT--TSCHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCC--CCCHHHHHHHHHHhCCcc
Confidence 56678889999999999999999999999999765 456678888889999965
|