Citrus Sinensis ID: 002029
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 978 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SX33 | 1200 | Putative phospholipid-tra | yes | no | 0.986 | 0.804 | 0.725 | 0.0 | |
| Q9LI83 | 1202 | Phospholipid-transporting | no | no | 0.998 | 0.812 | 0.716 | 0.0 | |
| Q9SAF5 | 1203 | Putative phospholipid-tra | no | no | 0.989 | 0.804 | 0.713 | 0.0 | |
| P57792 | 1184 | Putative phospholipid-tra | no | no | 0.977 | 0.807 | 0.709 | 0.0 | |
| Q9LK90 | 1189 | Putative phospholipid-tra | no | no | 0.947 | 0.779 | 0.677 | 0.0 | |
| Q9LNQ4 | 1216 | Putative phospholipid-tra | no | no | 0.976 | 0.785 | 0.578 | 0.0 | |
| Q9LVK9 | 1243 | Putative phospholipid-tra | no | no | 0.979 | 0.770 | 0.569 | 0.0 | |
| Q9SGG3 | 1228 | Putative phospholipid-tra | no | no | 0.984 | 0.784 | 0.576 | 0.0 | |
| Q9SLK6 | 1240 | Phospholipid-transporting | no | no | 0.983 | 0.775 | 0.554 | 0.0 | |
| Q9XIE6 | 1213 | Phospholipid-transporting | no | no | 0.922 | 0.743 | 0.481 | 0.0 |
| >sp|Q9SX33|ALA9_ARATH Putative phospholipid-transporting ATPase 9 OS=Arabidopsis thaliana GN=ALA9 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 1528 bits (3957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 715/985 (72%), Positives = 835/985 (84%), Gaps = 20/985 (2%)
Query: 1 MHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGA 60
+ ++ NF+ F+A ++CEDPNANLY+FVG++EL+ +YPL+PQQLLLRDSKLRNTD I+GA
Sbjct: 216 LRDEFNFKGFEAFVKCEDPNANLYSFVGTMELKGAKYPLSPQQLLLRDSKLRNTDFIFGA 275
Query: 61 VIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQD 120
VIFTG DTKV QNST PPSKRS +E++MDKIIY +F +++ M+FIGS+ FG+ TR+DL+D
Sbjct: 276 VIFTGHDTKVIQNSTDPPSKRSMIEKKMDKIIYLMFFMVITMAFIGSVIFGVTTRDDLKD 335
Query: 121 GKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFI 180
G MKRWYLRPD ++ ++DPKRA VAA+ HFLTA+MLY Y IPISLYVSIEIVK+LQSIFI
Sbjct: 336 GVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLTAVMLYSYFIPISLYVSIEIVKVLQSIFI 395
Query: 181 NQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRG 240
NQD+HMYYEE DKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCS+AGT+YGRG
Sbjct: 396 NQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRG 455
Query: 241 VTEVERAMARRKGSPL--------------EEEVTEEQEDKASIKGFNFEDERIMNGSWV 286
VTEVE AM RRKG PL +E +TEE +++KGFNF DERIMNG+WV
Sbjct: 456 VTEVEMAMGRRKGGPLVFQSDENDIDMEYSKEAITEE----STVKGFNFRDERIMNGNWV 511
Query: 287 NEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQ 346
E HADVIQKF RLLA+CHT +PEVDE+ KISYEAESPDEAAFVIAARELGFEF+ RTQ
Sbjct: 512 TETHADVIQKFFRLLAVCHTVIPEVDEDTEKISYEAESPDEAAFVIAARELGFEFFNRTQ 571
Query: 347 TSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFER 406
T+ISV ELD V+G +VER Y +LNVLEF+S+RKRMSVIV+ E+G LLLL KGAD+VMFER
Sbjct: 572 TTISVRELDLVSGKRVERLYKVLNVLEFNSTRKRMSVIVQEEDGKLLLLCKGADNVMFER 631
Query: 407 LAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREEL 466
L++NGREFEE+T++H+NEYADAGLRTLILAYRELDEKEYK FNE +EAK+SVSADRE L
Sbjct: 632 LSKNGREFEEETRDHVNEYADAGLRTLILAYRELDEKEYKVFNERISEAKSSVSADRESL 691
Query: 467 AEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 526
EE+ EKIEK+LILLGATAVEDKLQNGVP+CIDKLAQAGIK+WVLTGDKMETAINIGFAC
Sbjct: 692 IEEVTEKIEKDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFAC 751
Query: 527 SLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPL 586
SLLRQ M+Q+II+ ETPE ++LEK+ +K A A K +VL Q+I GK L S +
Sbjct: 752 SLLRQDMKQIIINLETPEIQSLEKTGEKDVIAKASKENVLSQIINGKTQLKYSGGN--AF 809
Query: 587 ALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 646
ALIIDGKSL YAL+DD+K +FLELA+ CASVICCRSSPKQKALVTRLVK+ TTLAIG
Sbjct: 810 ALIIDGKSLAYALDDDIKHIFLELAVSCASVICCRSSPKQKALVTRLVKSGNGKTTLAIG 869
Query: 647 DGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMIC 706
DGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR+LERLLLVHGHWCYRRIS+MIC
Sbjct: 870 DGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISTMIC 929
Query: 707 YFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFC 766
YFFYKNI FGFTLF +E Y +FS P YNDWFLSLYNVFF+SLPVIALGVFDQDVSAR+C
Sbjct: 930 YFFYKNITFGFTLFLYETYTTFSSTPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYC 989
Query: 767 LKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEIL 826
LKFPLLYQEGVQN+LFSW RILGW NG +A IIFF C +++ QAF G+ G EIL
Sbjct: 990 LKFPLLYQEGVQNVLFSWRRILGWMFNGFYSAVIIFFLCKSSLQSQAFNHDGKTPGREIL 1049
Query: 827 GTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVF 886
G TMYTC+VWVVN QMAL+++YFT IQH+ IW I WY F+ YG + IST AYKVF
Sbjct: 1050 GGTMYTCIVWVVNLQMALAISYFTLIQHIVIWSSIVVWYFFITVYGELPSRISTGAYKVF 1109
Query: 887 IEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQM 946
+EA AP+ S+WLITL V++++L+PYF YSA+QM FFP++H MIQW R +GQ +DPE+C +
Sbjct: 1110 VEALAPSLSYWLITLFVVVATLMPYFIYSALQMSFFPMYHGMIQWLRYEGQCNDPEYCDI 1169
Query: 947 VRQRSLRPTTVGYTARFEASSRDLK 971
VRQRS+RPTTVG+TAR EA R ++
Sbjct: 1170 VRQRSIRPTTVGFTARLEAKKRSVR 1194
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 1 |
| >sp|Q9LI83|ALA10_ARATH Phospholipid-transporting ATPase 10 OS=Arabidopsis thaliana GN=ALA10 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1500 bits (3884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 704/982 (71%), Positives = 828/982 (84%), Gaps = 5/982 (0%)
Query: 1 MHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGA 60
+++DS+F++F+ ++RCEDPN NLY FVG+L LEE+++PL+ QQ+LLRDSKLRNT+ +YGA
Sbjct: 215 LNQDSDFKDFRGVVRCEDPNVNLYVFVGTLALEEERFPLSIQQILLRDSKLRNTEYVYGA 274
Query: 61 VIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATRED-LQ 119
V+FTG DTKV QNST PPSKRS++ER MDKIIY +FG++ LMSF+GSI FG+ TRED ++
Sbjct: 275 VVFTGHDTKVIQNSTDPPSKRSRIERTMDKIIYLMFGLVFLMSFVGSIIFGVETREDKVK 334
Query: 120 DGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIF 179
+G+ +RWYL+PDD ++DP+RA +AA+ HF TA MLY Y IPISLYVSIEIVK+LQSIF
Sbjct: 335 NGRTERWYLKPDDADIFFDPERAPMAAIYHFFTATMLYSYFIPISLYVSIEIVKVLQSIF 394
Query: 180 INQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGR 239
IN+D+HMYYEETDKPA+ARTSNLNEELG VDTILSDKTGTLTCNSMEFIKCSIAG +YGR
Sbjct: 395 INRDIHMYYEETDKPAQARTSNLNEELGMVDTILSDKTGTLTCNSMEFIKCSIAGKAYGR 454
Query: 240 GVTEVERAMA-RRKGSPLEEEVTEEQEDKAS--IKGFNFEDERIMNGSWVNEPHADVIQK 296
G+TEVERAMA R GSPL E + D++ +KGFNFEDER+MNG+WV +P A V+QK
Sbjct: 455 GITEVERAMAVRSGGSPLVNEDLDVVVDQSGPKVKGFNFEDERVMNGNWVRQPEAAVLQK 514
Query: 297 FLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDP 356
F RLLA+CHTA+PE DEE+G +SYEAESPDEAAFV+AARE GFEF+ RTQ IS ELD
Sbjct: 515 FFRLLAVCHTAIPETDEESGNVSYEAESPDEAAFVVAAREFGFEFFNRTQNGISFRELDL 574
Query: 357 VTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEE 416
V+G KVER Y LLNVLEF+S+RKRMSVIVR ++G LLLLSKGAD+VMFERLA+NGR+FE
Sbjct: 575 VSGEKVERVYRLLNVLEFNSTRKRMSVIVRDDDGKLLLLSKGADNVMFERLAKNGRQFEA 634
Query: 417 QTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEK 476
+T+EH+N+YADAGLRTL+LAYRE+DE EY +FN+ F EAK SVS DRE L +EI +K+E+
Sbjct: 635 KTQEHVNQYADAGLRTLVLAYREVDENEYIEFNKSFNEAKASVSEDREALIDEITDKMER 694
Query: 477 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQV 536
+LILLGATAVEDKLQNGVPECIDKLAQAGIK+WVLTGDKMETAINIGFA SLLRQ M+Q+
Sbjct: 695 DLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFASSLLRQEMKQI 754
Query: 537 IISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLT 596
II+ ETP+ K+LEKS K A + SV+ QL GK LL +S S ALIIDGKSLT
Sbjct: 755 IINLETPQIKSLEKSGGKDEIELASRESVVMQLQEGKALLAASGASSEAFALIIDGKSLT 814
Query: 597 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 656
YALED++K +FL+LA CASVICCRSSPKQKALVTRLVK+ T TTLAIGDGANDVGMLQ
Sbjct: 815 YALEDEIKKMFLDLATSCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQ 874
Query: 657 EADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFG 716
EADIGVGISGVEGMQAVMSSDIAIAQFR+LERLLLVHGHWCY RI+SMICYFFYKNI FG
Sbjct: 875 EADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYSRIASMICYFFYKNITFG 934
Query: 717 FTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEG 776
T+F +EAY SFSGQP YNDWFLSL+NVFF+SLPVIALGVFDQDVSARFC KFPLLYQEG
Sbjct: 935 VTVFLYEAYTSFSGQPAYNDWFLSLFNVFFSSLPVIALGVFDQDVSARFCYKFPLLYQEG 994
Query: 777 VQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVW 836
VQNILFSW RI+GW NG +A IFF C ++K Q F G+ G EILG TMYTCVVW
Sbjct: 995 VQNILFSWKRIIGWMFNGFISALAIFFLCKESLKHQLFDPDGKTAGREILGGTMYTCVVW 1054
Query: 837 VVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSF 896
VVN QMALS++YFT++QH+ IWG I FWYIFL+ YGAM P ST AY VF+EA APAPS+
Sbjct: 1055 VVNLQMALSISYFTWVQHIVIWGSIAFWYIFLMIYGAMTPSFSTDAYMVFLEALAPAPSY 1114
Query: 897 WLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTT 956
WL TL V++ +L+PYF Y ++QMRFFP +HQMIQW R +G ++DPEF +MVRQRS+RPTT
Sbjct: 1115 WLTTLFVMIFALIPYFVYKSVQMRFFPKYHQMIQWIRYEGHSNDPEFVEMVRQRSIRPTT 1174
Query: 957 VGYTARFEASSRDLKAKLEDSL 978
VGYTAR AS R A+ D +
Sbjct: 1175 VGYTARRAASVRR-SARFHDQI 1195
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SAF5|ALA11_ARATH Putative phospholipid-transporting ATPase 11 OS=Arabidopsis thaliana GN=ALA11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1466 bits (3794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 696/975 (71%), Positives = 812/975 (83%), Gaps = 7/975 (0%)
Query: 1 MHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGA 60
+HEDS+F+ KA+++CEDPNA+LYTFVG+L EEQ+ PL+ QLLLRDSKLRNT+ IYG
Sbjct: 213 LHEDSDFKELKAVVKCEDPNADLYTFVGTLHFEEQRLPLSITQLLLRDSKLRNTEYIYGV 272
Query: 61 VIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDL-- 118
V+FTG DTKV QNST PPSKRS++ER+MDKIIY +FG++ LMSFIGSI FGI TRED
Sbjct: 273 VVFTGHDTKVIQNSTDPPSKRSRIERKMDKIIYLMFGVVFLMSFIGSIVFGIETREDRVR 332
Query: 119 QDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSI 178
G+ +RWYLRPD+ ++DP RA +AAV HF TA+MLY Y IPISLYVSIEIVK+LQS+
Sbjct: 333 NGGRTERWYLRPDNADIFFDPDRAPMAAVYHFFTAVMLYSYFIPISLYVSIEIVKVLQSL 392
Query: 179 FINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYG 238
FIN D+ MYYEE DKPA ARTSNLNEELG VDTILSDKTGTLTCNSMEFIKCSIAGT+YG
Sbjct: 393 FINNDILMYYEENDKPAHARTSNLNEELGMVDTILSDKTGTLTCNSMEFIKCSIAGTAYG 452
Query: 239 RGVTEVERAMA-RRKGSPLEEEVTEEQEDKAS--IKGFNFEDERIMNGSWVNEPHADVIQ 295
RG+TEVER+MA R GS L + + D++ IKGFNF DER+M G+WV + A V+Q
Sbjct: 453 RGITEVERSMAMRSNGSSLVGDDLDVVVDQSGPKIKGFNFLDERVMKGNWVKQRDAAVLQ 512
Query: 296 KFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELD 355
KF RLLA+CHTA+PE DE G +SYEAESPDEAAFV+AARE GFEF+ RTQ IS ELD
Sbjct: 513 KFFRLLAVCHTAIPETDEATGSVSYEAESPDEAAFVVAAREFGFEFFSRTQNGISFRELD 572
Query: 356 PVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFE 415
+G VER Y LLNVLEF+S+RKRMSVIVR E+G LLLLSKGAD+VMFERLA+NGR+FE
Sbjct: 573 LASGKTVERVYRLLNVLEFNSARKRMSVIVRDEDGRLLLLSKGADNVMFERLAKNGRKFE 632
Query: 416 EQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIE 475
E+T+EH+NEYADAGLRTLILAYRE+DE EY +F++ F EAKNSV+ADRE L +EI E++E
Sbjct: 633 EKTREHVNEYADAGLRTLILAYREVDENEYIEFSKNFNEAKNSVTADRESLIDEITEQME 692
Query: 476 KNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQ 535
++LILLGATAVEDKLQNGVP+CIDKLAQAGIK+WVLTGDKMETAINIGFACSLLRQ M+Q
Sbjct: 693 RDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQEMKQ 752
Query: 536 VIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLG--PLALIIDGK 593
+II+ ETP K LEK+ +K A A + SV++Q+ GK LL +S+ + ALIIDGK
Sbjct: 753 IIINLETPHIKALEKAGEKDAIEHASRESVVNQMEEGKALLTASSSASSHEAFALIIDGK 812
Query: 594 SLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVG 653
SLTYALEDD K FL+LA GCASVICCRSSPKQKALVTRLVK+ T TTLAIGDGANDVG
Sbjct: 813 SLTYALEDDFKKKFLDLATGCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVG 872
Query: 654 MLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNI 713
MLQEADIGVGISGVEGMQAVMSSDIAIAQFR+LERLLLVHGHWCY RISSMICYFFYKNI
Sbjct: 873 MLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYSRISSMICYFFYKNI 932
Query: 714 AFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLY 773
FG T+F +EAY SFS QP YNDWFLSL+NVFF+SLPVIALGVFDQDVSAR+C KFPLLY
Sbjct: 933 TFGVTVFLYEAYTSFSAQPAYNDWFLSLFNVFFSSLPVIALGVFDQDVSARYCYKFPLLY 992
Query: 774 QEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTC 833
QEGVQN+LFSW RI+GW NGV A IFF C ++K Q + G+ G EILG TMYTC
Sbjct: 993 QEGVQNLLFSWKRIIGWMFNGVFTALAIFFLCKESLKHQLYNPNGKTAGREILGGTMYTC 1052
Query: 834 VVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPA 893
VVWVVN QMAL+++YFT++QH+ IWG + FWYIFL+ YGA+ P ST AYKVFIEA APA
Sbjct: 1053 VVWVVNLQMALAISYFTWLQHIVIWGSVAFWYIFLMIYGAITPSFSTDAYKVFIEALAPA 1112
Query: 894 PSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLR 953
PS+WL TL V+ +L+P+F + ++QMRFFP +HQMIQW R +G ++DPEF +MVRQRS+R
Sbjct: 1113 PSYWLTTLFVMFFALIPFFVFKSVQMRFFPGYHQMIQWIRYEGHSNDPEFVEMVRQRSIR 1172
Query: 954 PTTVGYTARFEASSR 968
PTTVG+TAR AS R
Sbjct: 1173 PTTVGFTARRAASVR 1187
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P57792|ALA12_ARATH Putative phospholipid-transporting ATPase 12 OS=Arabidopsis thaliana GN=ALA12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1449 bits (3750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 683/962 (70%), Positives = 809/962 (84%), Gaps = 6/962 (0%)
Query: 1 MHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGA 60
+ E+ NF++F+A I+CEDPNANLY+FVG+++L+ ++YPL+PQQLLLR SKLRNTD IYG
Sbjct: 216 LREELNFRDFEAFIKCEDPNANLYSFVGTMDLKGEKYPLSPQQLLLRGSKLRNTDYIYGV 275
Query: 61 VIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQD 120
VIFTG DTKV QNST PPSKRS +ER+MDKIIY +F ++ ++F GS+ FGI TR+D Q+
Sbjct: 276 VIFTGPDTKVVQNSTDPPSKRSMIERKMDKIIYLMFLMVFSLAFFGSVLFGIWTRDDFQN 335
Query: 121 GKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFI 180
G M+RWYL+PDD++ ++DPKRA +AA+ HFLTALML Y IPISLYVSIEIVK+LQSIFI
Sbjct: 336 GVMERWYLKPDDSSIFFDPKRAPMAAIYHFLTALMLNSYFIPISLYVSIEIVKVLQSIFI 395
Query: 181 NQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRG 240
NQD+HMYYEE DKPA ARTSNLNEELGQV TILSDKTGTLTCNSMEFIKCSIAGT+YGRG
Sbjct: 396 NQDIHMYYEEADKPAHARTSNLNEELGQVGTILSDKTGTLTCNSMEFIKCSIAGTAYGRG 455
Query: 241 VTEVERAMARRKGSPLEEEVTEEQEDKA-----SIKGFNFEDERIMNGSWVNEPHADVIQ 295
VTEVE AM +RKGS L + + A ++KGFNF DERIM+G+WV E HADVIQ
Sbjct: 456 VTEVEMAMDKRKGSALVNQSNGNSTEDAVAAEPAVKGFNFRDERIMDGNWVTETHADVIQ 515
Query: 296 KFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELD 355
KF +LLA+CHT +PEVDE+ GKISYEAESPDEAAFVIAARELGFEF+ RTQT+ISV ELD
Sbjct: 516 KFFQLLAVCHTVIPEVDEDTGKISYEAESPDEAAFVIAARELGFEFFTRTQTTISVRELD 575
Query: 356 PVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFE 415
VTG +VER YS+LNVLEFSSS+KRMSVIV+ ++G LLLL KGADSVMFERL+E+GR++E
Sbjct: 576 LVTGERVERLYSVLNVLEFSSSKKRMSVIVQDQDGKLLLLCKGADSVMFERLSESGRKYE 635
Query: 416 EQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIE 475
++T++H+NEYADAGLRTLILAYRELDE EY+ F E +EAKNSVSADRE L +E+ EKIE
Sbjct: 636 KETRDHVNEYADAGLRTLILAYRELDENEYEVFTERISEAKNSVSADREALIDEVTEKIE 695
Query: 476 KNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQ 535
KNL+LLGATAVEDKLQNGVP+CI+KLAQAGIK+WVLTGDKMETAINIGFACSLLR+ M+Q
Sbjct: 696 KNLVLLGATAVEDKLQNGVPDCINKLAQAGIKIWVLTGDKMETAINIGFACSLLRRDMKQ 755
Query: 536 VIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSL 595
+II+ ETPE + LEKS +K A AA LK +VLHQ+ GK L +S + ALIIDGKSL
Sbjct: 756 IIINLETPEIQQLEKSGEKDAIAA-LKENVLHQITSGKAQLKASGGNAKAFALIIDGKSL 814
Query: 596 TYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGML 655
YALE+D+K +FLELAIGCASVICCRSSPKQKALVTRLVKT + TTLAIGDGANDVGML
Sbjct: 815 AYALEEDMKGIFLELAIGCASVICCRSSPKQKALVTRLVKTGSGQTTLAIGDGANDVGML 874
Query: 656 QEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAF 715
QEADIGVGISGVEGMQAVMSSDIAIAQFR+LERLLLVHGHWCYRRIS MICYFFYKNI F
Sbjct: 875 QEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISKMICYFFYKNITF 934
Query: 716 GFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQE 775
GFTLF +EAY SFS P YNDW+LSLY+VFFTSLPVI LG+FDQDVSA FCLKFP+LYQE
Sbjct: 935 GFTLFLYEAYTSFSATPAYNDWYLSLYSVFFTSLPVICLGIFDQDVSAPFCLKFPVLYQE 994
Query: 776 GVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVV 835
GVQN+LFSW RIL W +G +A IIFF C +++ QAF G+ G +ILG TMYTCVV
Sbjct: 995 GVQNLLFSWRRILSWMFHGFCSAIIIFFLCKTSLESQAFNHEGKTAGRDILGGTMYTCVV 1054
Query: 836 WVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPS 895
WVV+ QM L+++YFT IQH+ +WG + WY+FL+ YG++ +ST AY VF+EA APAPS
Sbjct: 1055 WVVSLQMVLTISYFTLIQHVVVWGSVVIWYLFLMVYGSLPIRMSTDAYMVFLEALAPAPS 1114
Query: 896 FWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPT 955
+W+ TL V++S+++PYF +SAIQMRFFP+ H +Q R + Q + +M RQ S+RPT
Sbjct: 1115 YWITTLFVVLSTMMPYFIFSAIQMRFFPMSHGTVQLLRYEDQCSNSGNFEMGRQGSVRPT 1174
Query: 956 TV 957
V
Sbjct: 1175 LV 1176
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LK90|ALA8_ARATH Putative phospholipid-transporting ATPase 8 OS=Arabidopsis thaliana GN=ALA8 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1371 bits (3548), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/937 (67%), Positives = 785/937 (83%), Gaps = 10/937 (1%)
Query: 3 EDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVI 62
++ + +NF+ +I+CEDPN +LY+FVG+L E +QYPL+PQQ+LLRDSKL+NTD +YG V+
Sbjct: 211 DEESIKNFRGMIKCEDPNEHLYSFVGTLYFEGKQYPLSPQQILLRDSKLKNTDYVYGVVV 270
Query: 63 FTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQD-G 121
FTG DTKV QN+T PPSKRSK+E++MD+IIY LF IL++++F GS+FFGIATR D+ D G
Sbjct: 271 FTGHDTKVMQNATDPPSKRSKIEKKMDQIIYILFSILIVIAFTGSVFFGIATRRDMSDNG 330
Query: 122 KMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFIN 181
K++RWYLRPD TT +YDP+RA AA HFLTALMLYGYLIPISLYVSIE+VK+LQSIFIN
Sbjct: 331 KLRRWYLRPDHTTVFYDPRRAVAAAFFHFLTALMLYGYLIPISLYVSIEVVKVLQSIFIN 390
Query: 182 QDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGV 241
QD MY+EETD+PARARTSNLNEELGQVDTILSDKTGTLTCNSMEF+KCSIAGT+YGRG+
Sbjct: 391 QDQEMYHEETDRPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGTAYGRGM 450
Query: 242 TEVERAMARRKGSPLEEEVTEEQ----EDKASIKGFNFEDERIMNGSWVNEPHADVIQKF 297
TEVE A+ ++KG +EEV + + +++ ++KGFNF DERI++G W+N+P+A++IQKF
Sbjct: 451 TEVEVALRKQKGLMTQEEVGDNESLSIKEQKAVKGFNFWDERIVDGQWINQPNAELIQKF 510
Query: 298 LRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPV 357
R+LAICHTA+P+V+ + G+I+YEAESPDEAAFVIA+RELGFEF+ R+QTSIS+HE+D +
Sbjct: 511 FRVLAICHTAIPDVNSDTGEITYEAESPDEAAFVIASRELGFEFFSRSQTSISLHEIDHM 570
Query: 358 TGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQ 417
TG KV+R Y LL+VLEFSSSRKRMSVIVR+ E LLLLSKGADSVMF+RLA++GR+ E +
Sbjct: 571 TGEKVDRVYELLHVLEFSSSRKRMSVIVRNPENRLLLLSKGADSVMFKRLAKHGRQNERE 630
Query: 418 TKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKN 477
TKEHI +YA+AGLRTL++ YRE+DE EY + EEF AK V+ DR+ L + A+KIEK+
Sbjct: 631 TKEHIKKYAEAGLRTLVITYREIDEDEYIVWEEEFLNAKTLVTEDRDALIDAAADKIEKD 690
Query: 478 LILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVI 537
LILLG+TAVEDKLQ GVP+CI+KL+QAG+K+WVLTGDK ETAINIG+ACSLLR+GM+Q++
Sbjct: 691 LILLGSTAVEDKLQKGVPDCIEKLSQAGVKIWVLTGDKTETAINIGYACSLLREGMKQIL 750
Query: 538 ISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL-----DSSNESLGPLALIIDG 592
++ ++ + + LEK DK A A A S+ QL G +S+ E+ L+IDG
Sbjct: 751 VTLDSSDIEALEKQGDKEAVAKASFQSIKKQLREGMSQTAAVTDNSAKENSEMFGLVIDG 810
Query: 593 KSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDV 652
KSLTYAL+ ++ FLELAI C SVICCRSSPKQKALVTRLVK T TTLAIGDGANDV
Sbjct: 811 KSLTYALDSKLEKEFLELAIRCNSVICCRSSPKQKALVTRLVKNGTGRTTLAIGDGANDV 870
Query: 653 GMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKN 712
GMLQEADIGVGISG EGMQAVM+SD AIAQFRFLERLLLVHGHWCYRRI+ MICYFFYKN
Sbjct: 871 GMLQEADIGVGISGAEGMQAVMASDFAIAQFRFLERLLLVHGHWCYRRITLMICYFFYKN 930
Query: 713 IAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLL 772
+AFGFTLF++EAYASFSG+P YNDW++S YNVFFTSLPVIALGVFDQDVSAR CLK+PLL
Sbjct: 931 LAFGFTLFWYEAYASFSGKPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLL 990
Query: 773 YQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYT 832
YQEGVQN+LFSW RILGW LNGV ++ IIFF I+ M QAFRK G+V+ +LG TMY+
Sbjct: 991 YQEGVQNVLFSWERILGWMLNGVISSMIIFFLTINTMATQAFRKDGQVVDYSVLGVTMYS 1050
Query: 833 CVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAP 892
VVW VNCQMA+S+ YFT+IQH FIWG I WY+FL+ YG++ P STTA++VF+E AP
Sbjct: 1051 SVVWTVNCQMAISINYFTWIQHCFIWGSIGVWYLFLVIYGSLPPTFSTTAFQVFVETSAP 1110
Query: 893 APSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMI 929
+P +WL+ LV+ S+LLPYFTY A Q++F P++H +I
Sbjct: 1111 SPIYWLVLFLVVFSALLPYFTYRAFQIKFRPMYHDII 1147
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LNQ4|ALA4_ARATH Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1189 bits (3077), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 573/990 (57%), Positives = 733/990 (74%), Gaps = 35/990 (3%)
Query: 6 NFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTG 65
+F++F IIRCEDPN +LYTFVG+LE E Q +PL P Q+LLRDSKLRNT +YG V+FTG
Sbjct: 220 SFKDFTGIIRCEDPNPSLYTFVGNLEYERQIFPLDPSQILLRDSKLRNTPYVYGVVVFTG 279
Query: 66 RDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKR 125
DTKV QNST PSKRS++E+ MD IIY L +L+L+S I S F T+ + K
Sbjct: 280 HDTKVMQNSTKSPSKRSRIEKTMDYIIYTLLVLLILISCISSSGFAWETKFHMP----KW 335
Query: 126 WYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLH 185
WYLRP++ +P A +H +TAL+LYGYLIPISLYVSIE+VK+LQ+ FIN+DLH
Sbjct: 336 WYLRPEEPENLTNPSNPVYAGFVHLITALLLYGYLIPISLYVSIEVVKVLQASFINKDLH 395
Query: 186 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 245
MY E+ PA ARTSNLNEELGQVDTILSDKTGTLTCN M+F+KCSIAGTSYG +EVE
Sbjct: 396 MYDSESGVPAHARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVE 455
Query: 246 RAMARRKGSPLEE------------------EVTEEQEDKASIKGFNFEDERIMNGSWVN 287
A A++ L+E EV + IKGF FED R+M+G+W+
Sbjct: 456 VAAAQQMAVDLDEHGEVSSRTSTPRAQARDIEVESSITPRIPIKGFGFEDIRLMDGNWLR 515
Query: 288 EPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQT 347
EPH D I F R+LAICHTA+PE++EE GK +YEAESPDEA+F+ AA E GF F++RTQ+
Sbjct: 516 EPHTDDILLFFRILAICHTAIPELNEETGKYTYEAESPDEASFLTAASEFGFVFFKRTQS 575
Query: 348 SISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERL 407
S+ VHE +G +ER Y +LN+L+F+S RKRMSV+VR EEG +LLL KGADS++FERL
Sbjct: 576 SVYVHERLSHSGQTIEREYKVLNLLDFTSKRKRMSVVVRDEEGQILLLCKGADSIIFERL 635
Query: 408 AENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELA 467
A+NG+ + T +H+NEY +AGLRTL L+YR+LDE+EY +N EF +AK S+ +DR+EL
Sbjct: 636 AKNGKVYLGPTTKHLNEYGEAGLRTLALSYRKLDEEEYSAWNAEFHKAKTSIGSDRDELL 695
Query: 468 EEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACS 527
E I++ IEK+LIL+GATAVEDKLQ GVP+CIDKLAQAG+KLWVLTGDKMETAINIG++CS
Sbjct: 696 ERISDMIEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGYSCS 755
Query: 528 LLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLA 587
LLRQGM+Q+ I T+ SE S A A+K ++L+Q+ + +++ + A
Sbjct: 756 LLRQGMKQICI--------TVVNSEGASQDAKAVKDNILNQITKAVQMVKLEKDPHAAFA 807
Query: 588 LIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 647
LIIDGK+LTYALED++K FL LA+ CASVICCR SPKQKALVTRLVK T TLAIGD
Sbjct: 808 LIIDGKTLTYALEDEMKYQFLALAVDCASVICCRVSPKQKALVTRLVKEGTGKITLAIGD 867
Query: 648 GANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICY 707
GANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQFRFLERLL+VHGHWCY+RI+ MICY
Sbjct: 868 GANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICY 927
Query: 708 FFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCL 767
FFYKNIAFG TLF+FEA+ FSGQ VYND++L L+NV TSLPVIALGVF+QDVS+ CL
Sbjct: 928 FFYKNIAFGLTLFYFEAFTGFSGQSVYNDYYLLLFNVVLTSLPVIALGVFEQDVSSEICL 987
Query: 768 KFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILG 827
+FP LYQ+G +N+ F W RILGW NGV ++ +IFF I + +QAFR G+ ++ +G
Sbjct: 988 QFPALYQQGKKNLFFDWYRILGWMGNGVYSSLVIFFLNIGIIYEQAFRVSGQTADMDAVG 1047
Query: 828 TTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFI 887
TTM+TC++W VN Q+AL+V++FT+IQH+ IWG I WY+F+ YG M P +S Y++ +
Sbjct: 1048 TTMFTCIIWAVNVQIALTVSHFTWIQHVLIWGSIGLWYLFVALYGMMPPSLSGNIYRILV 1107
Query: 888 EACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQ---WFRSDGQTDDPEFC 944
E APAP +W+ T LV ++++LPYF + + Q PL H +IQ +++ D +D
Sbjct: 1108 EILAPAPIYWIATFLVTVTTVLPYFAHISFQRFLHPLDHHIIQEIKYYKRD--VEDRRMW 1165
Query: 945 QMVRQRSLRPTTVGYTARFEASSRDLKAKL 974
R ++ T +G+TAR +A R L++KL
Sbjct: 1166 TRERTKAREKTKIGFTARVDAKIRHLRSKL 1195
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LVK9|ALA7_ARATH Putative phospholipid-transporting ATPase 7 OS=Arabidopsis thaliana GN=ALA7 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 1187 bits (3072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 580/1018 (56%), Positives = 731/1018 (71%), Gaps = 60/1018 (5%)
Query: 1 MHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGA 60
+ D FQ+F I+CEDPN NLYTFVG+LE + Q YPL P Q+LLRDSKLRNT +YG
Sbjct: 215 LERDDTFQSFSGTIKCEDPNPNLYTFVGNLEYDGQVYPLDPSQILLRDSKLRNTSYVYGV 274
Query: 61 VIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQD 120
V+FTG DTKV QNST PSKRS++E+RMD IIY LF +LVL+SFI S+ F + T+ + D
Sbjct: 275 VVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLFALLVLVSFISSLGFAVMTKMHMGD 334
Query: 121 GKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFI 180
WYLRPD +P+ A V+H +TA++LYGYLIPISLYVSIE+VK+LQ+ FI
Sbjct: 335 W----WYLRPDKPERLTNPRNPFHAWVVHLITAVLLYGYLIPISLYVSIELVKVLQATFI 390
Query: 181 NQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRG 240
NQDL MY E+ PA+ARTSNLNEELGQVDTILSDKTGTLTCN M+F+KCSIAGTSYG
Sbjct: 391 NQDLQMYDSESGTPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTSYGVR 450
Query: 241 VTEVERAMARRKGSPLEEEVTEE------------------------------------- 263
+EVE A A++ L+EE EE
Sbjct: 451 ASEVELAAAKQMAIDLDEEQGEEVTHLPRTRGRMHGYAKMPSKTSSDIELETVITATDEG 510
Query: 264 -QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEA 322
Q IKGF+FED+R+M G+W+NEP++D I FLR+LA+CHTA+PEVDE+ GK +YEA
Sbjct: 511 DQTQSTGIKGFSFEDQRLMGGNWLNEPNSDDILMFLRILAVCHTAIPEVDEDTGKCTYEA 570
Query: 323 ESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMS 382
ESPDE AF++AA E GFEF +RTQ+S+ + E +G VER Y +LNVL+F+S RKRMS
Sbjct: 571 ESPDEVAFLVAAGEFGFEFTKRTQSSVFISERH--SGQPVEREYKVLNVLDFTSKRKRMS 628
Query: 383 VIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDE 442
VIVR E+G +LLL KGADS++FERL++NG+ + E T +H+N Y +AGLRTL L+YR+LDE
Sbjct: 629 VIVRDEKGQILLLCKGADSIIFERLSKNGKNYLEATSKHLNGYGEAGLRTLALSYRKLDE 688
Query: 443 KEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLA 502
EY +N EF +AK SV ADR+E+ E++++ +EK LIL+GATAVEDKLQ GVP+CIDKLA
Sbjct: 689 TEYSIWNSEFHKAKTSVGADRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDKLA 748
Query: 503 QAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALK 562
QAG+K+WVLTGDKMETAINIG+ACSLLRQGM+Q+ I+ E S+D AAA +
Sbjct: 749 QAGLKIWVLTGDKMETAINIGYACSLLRQGMKQIYIALRNEEGS----SQDPEAAA---R 801
Query: 563 ASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS 622
++L Q+I +++ + ALIIDGK+LTYALEDD+K FL LA+ CASVICCR
Sbjct: 802 ENILMQIINASQMIKLEKDPHAAFALIIDGKTLTYALEDDIKYQFLALAVDCASVICCRV 861
Query: 623 SPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682
SPKQKALVTRL K T TTLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQ
Sbjct: 862 SPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQ 921
Query: 683 FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLY 742
FRFLERLL+VHGHWCY+RI+ MICYFFYKNI FG TLF+FEA+ FSGQ +YND +L L+
Sbjct: 922 FRFLERLLVVHGHWCYKRIAQMICYFFYKNITFGLTLFYFEAFTGFSGQAIYNDSYLLLF 981
Query: 743 NVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIF 802
NV TSLPVIALGVF+QDVS+ CL+FP LYQ+G +N+ F W RI+GW NGV + +IF
Sbjct: 982 NVILTSLPVIALGVFEQDVSSEVCLQFPALYQQGPKNLFFDWYRIIGWMANGVYASVVIF 1041
Query: 803 FFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGIT 862
I Q+F GG+ ++ +GT M+TC++W VN Q+AL++++FT+IQH+ IWG I
Sbjct: 1042 SLNIGIFHVQSFCSGGQTADMDAMGTAMFTCIIWAVNVQIALTMSHFTWIQHVLIWGSIV 1101
Query: 863 FWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFF 922
WYIFL +G + P +S + + E APAP FWL +LLV+ ++ LPY Y + Q
Sbjct: 1102 TWYIFLALFGMLPPKVSGNIFHMLSETLAPAPIFWLTSLLVIAATTLPYLAYISFQRSLN 1161
Query: 923 PLHHQMIQ---WFRSDGQTDDPEFCQMVRQRS--LRPTTVGYTARFEASSRDLKAKLE 975
PL H +IQ FR D Q + C R+RS T +G TAR +A R L+ +L+
Sbjct: 1162 PLDHHIIQEIKHFRIDVQDE----CMWTRERSKAREKTKIGVTARVDAKIRQLRGRLQ 1215
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SGG3|ALA5_ARATH Putative phospholipid-transporting ATPase 5 OS=Arabidopsis thaliana GN=ALA5 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1182 bits (3059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/1004 (57%), Positives = 728/1004 (72%), Gaps = 41/1004 (4%)
Query: 1 MHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGA 60
+ +D +F+NF A IRCEDPN NLYTFVG+LE E Q +PL P Q+LLRDSKLRNT +YG
Sbjct: 215 LDDDESFKNFMATIRCEDPNPNLYTFVGNLEFERQTFPLDPSQILLRDSKLRNTTYVYGV 274
Query: 61 VIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQD 120
V+FTG DTKV QNST PSKRS++ER MD IIY L +L+L+S I S F T +
Sbjct: 275 VVFTGFDTKVMQNSTKSPSKRSRIERTMDYIIYTLLVLLILISCISSSGFAWETEFHMP- 333
Query: 121 GKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFI 180
K WYLRP + + +P A V+H +TAL+LYGYLIPISLYVSIE+VK+ Q+ FI
Sbjct: 334 ---KMWYLRPGEPIDFTNPINPIYAGVVHLITALLLYGYLIPISLYVSIEVVKVWQASFI 390
Query: 181 NQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRG 240
NQDLHMY +E+ PA ARTSNLNEELGQV TILSDKTGTLTCN M+F+KCSIAGTSYG
Sbjct: 391 NQDLHMYDDESGVPANARTSNLNEELGQVHTILSDKTGTLTCNQMDFLKCSIAGTSYGVR 450
Query: 241 VTEVERAMARRKGSPLEE------------------------EVTEEQED-----KASIK 271
+EVE A A++ LEE E+ E ++ +A IK
Sbjct: 451 SSEVEVAAAKQMAVDLEEHGEISSTPQSQTKVYGTWDSSRTQEIEVEGDNNYNTPRAPIK 510
Query: 272 GFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFV 331
GF FED R+MNG+W+ E + I +F R+LAICHTA+PE++EE GK +YEAESPDEA+F+
Sbjct: 511 GFGFEDNRLMNGNWLRESQPNDILQFFRILAICHTAIPELNEETGKYTYEAESPDEASFL 570
Query: 332 IAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGT 391
AARE GFEF++RTQ+S+ + E +G +ER Y +LN+LEF+S RKRM+VIVR EEG
Sbjct: 571 AAAREFGFEFFKRTQSSVFIRERFSGSGQIIEREYKVLNLLEFTSKRKRMTVIVRDEEGQ 630
Query: 392 LLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEE 451
+LLL KGADS++FERLA+NG+ + T H+ EY +AGLRTL LAYR+LDE EY +N E
Sbjct: 631 ILLLCKGADSIIFERLAKNGKTYLGPTTRHLTEYGEAGLRTLALAYRKLDEDEYAAWNSE 690
Query: 452 FTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVL 511
F +AK S+ +DR+EL E A+ IEK LIL+GATAVEDKLQ GVP+CIDKLAQAG+KLWVL
Sbjct: 691 FLKAKTSIGSDRDELLETGADMIEKELILIGATAVEDKLQKGVPQCIDKLAQAGLKLWVL 750
Query: 512 TGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIR 571
TGDKMETAINIGFACSLLRQGMRQ+ I+S E S+D + +K ++L+QL +
Sbjct: 751 TGDKMETAINIGFACSLLRQGMRQICITSMNSEGG----SQD---SKRVVKENILNQLTK 803
Query: 572 GKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVT 631
+++ + ALIIDGK+LTYALEDD+K FL LA+ CASVICCR SPKQKALV
Sbjct: 804 AVQMVKLEKDPHAAFALIIDGKTLTYALEDDMKYQFLALAVDCASVICCRVSPKQKALVV 863
Query: 632 RLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLL 691
RLVK T TTLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQFRFLERLL+
Sbjct: 864 RLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLV 923
Query: 692 VHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPV 751
VHGHWCY+RI+ MICYFFYKNIAFG TLF+FEA+ FSGQ VYND++L L+NV TSLPV
Sbjct: 924 VHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSVYNDYYLLLFNVVLTSLPV 983
Query: 752 IALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQ 811
IALGVF+QDVS+ CL+FP LYQ+G +N+ F W+RILGW NGV + +IFF I +
Sbjct: 984 IALGVFEQDVSSEICLQFPALYQQGTKNLFFDWSRILGWMCNGVYASLVIFFLNIGIIYS 1043
Query: 812 QAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAY 871
QAFR G+ ++ +GTTM+TC++W N Q+AL++++FT+IQH+ IWG I WY+F+ Y
Sbjct: 1044 QAFRDNGQTADMDAVGTTMFTCIIWAANVQIALTMSHFTWIQHVLIWGSIGMWYLFVAIY 1103
Query: 872 GAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQW 931
M P S Y++ E APAP +W+ TLLV ++++LPY + A Q PL H +IQ
Sbjct: 1104 SMMPPSYSGNIYRILDEILAPAPIYWMATLLVTVAAVLPYVAHIAFQRFLNPLDHHIIQE 1163
Query: 932 FRSDGQ-TDDPEFCQMVRQRSLRPTTVGYTARFEASSRDLKAKL 974
+ G+ +D R ++ T +G+TAR +A R L++KL
Sbjct: 1164 IKYYGRDIEDARLWTRERTKAREKTKIGFTARVDAKIRHLRSKL 1207
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SLK6|ALA6_ARATH Phospholipid-transporting ATPase 6 OS=Arabidopsis thaliana GN=ALA6 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1164 bits (3010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 563/1015 (55%), Positives = 725/1015 (71%), Gaps = 53/1015 (5%)
Query: 1 MHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGA 60
+ +D +FQNF I+CEDPN NLYTFVG+LE + Q YPL P Q+LLRDSKLRNT +YG
Sbjct: 216 LEKDESFQNFSGTIKCEDPNPNLYTFVGNLECDGQVYPLDPNQILLRDSKLRNTAYVYGV 275
Query: 61 VIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQD 120
V+FTG DTKV QNST PSKRS++E+RMD IIY LF +L+ +SFI S+ F + T+ + +
Sbjct: 276 VVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLFALLLTVSFISSLGFAVMTKLLMAE 335
Query: 121 GKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFI 180
WYLRPD + +P A V+H +TAL+LYGYLIPISLYVSIE+VK+LQ+ FI
Sbjct: 336 W----WYLRPDKPESLTNPTNPLYAWVVHLITALLLYGYLIPISLYVSIEVVKVLQAHFI 391
Query: 181 NQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRG 240
NQDL +Y E+ PA+ARTSNLNEELGQVDTILSDKTGTLTCN M+F+KCSIAGTSYG
Sbjct: 392 NQDLQLYDSESGTPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTSYGVR 451
Query: 241 VTEVERAMARRKGSPLEEEVTE-------------------------------------E 263
+EVE A A++ LEE+ E +
Sbjct: 452 ASEVELAAAKQMAMDLEEKGEEVANLSMNKGRTQRYAKLASKTSSDFELETVVTASDEKD 511
Query: 264 QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 323
Q+ +KGF+FED R+MN +W+NEP++D I F R+LA+CHTA+PEVDE+ G +YEAE
Sbjct: 512 QKQNTGVKGFSFEDNRLMNENWLNEPNSDDILMFFRILAVCHTAIPEVDEDTGMCTYEAE 571
Query: 324 SPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSV 383
SPDE AF++A+RE GFEF +RTQ+S+ + E +G V+R Y +LN+L+F+S RKRMS
Sbjct: 572 SPDEVAFLVASREFGFEFTKRTQSSVFIAERFSSSGQPVDREYKILNLLDFTSKRKRMSA 631
Query: 384 IVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEK 443
IVR EEG +LLL KGADS++FERL+++G+E+ T +H+N Y +AGLRTL L YR+LDE
Sbjct: 632 IVRDEEGQILLLCKGADSIIFERLSKSGKEYLGATSKHLNVYGEAGLRTLALGYRKLDET 691
Query: 444 EYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 503
EY +N EF +AK SV ADR+E+ E++++ +EK LIL+GATAVEDKLQ GVP+CID LAQ
Sbjct: 692 EYAAWNSEFHKAKTSVGADRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDNLAQ 751
Query: 504 AGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKA 563
AG+K+WVLTGDKMETAINIG+ACSLLRQGM+Q+ IS E E S++ AAA K
Sbjct: 752 AGLKIWVLTGDKMETAINIGYACSLLRQGMKQISISLTNVE----ESSQNSEAAA---KE 804
Query: 564 SVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS 623
S+L Q+ +++ + ALIIDGK+LTYAL+DDVK FL LA+ CASVICCR S
Sbjct: 805 SILMQITNASQMIKIEKDPHAAFALIIDGKTLTYALKDDVKYQFLALAVDCASVICCRVS 864
Query: 624 PKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 683
PKQKALVTRL K T TTLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQF
Sbjct: 865 PKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQF 924
Query: 684 RFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYN 743
RFLERLL+VHGHWCY+RI+ MICYFFYKNI FG TLF+FE + FSGQ +YND +L L+N
Sbjct: 925 RFLERLLVVHGHWCYKRIAQMICYFFYKNITFGLTLFYFECFTGFSGQSIYNDSYLLLFN 984
Query: 744 VFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFF 803
V TSLPVI+LGVF+QDV + CL+FP LYQ+G +N+ F W RILGW NGV + +IF
Sbjct: 985 VVLTSLPVISLGVFEQDVPSDVCLQFPALYQQGPKNLFFDWYRILGWMGNGVYASIVIFT 1044
Query: 804 FCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITF 863
+ Q+FR G+ + +GT M+TC++W VN Q+AL++++FT+IQH+ IWG I
Sbjct: 1045 LNLGIFHVQSFRSDGQTADMNAMGTAMFTCIIWAVNVQIALTMSHFTWIQHVMIWGSIGA 1104
Query: 864 WYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFP 923
WY+FL YG + +S + + +E APAP FWL +LLV+ ++ LPY + + Q P
Sbjct: 1105 WYVFLALYGMLPVKLSGNIFHMLVEILAPAPIFWLTSLLVIAATTLPYLFHISYQRSVNP 1164
Query: 924 LHHQMIQ---WFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFEASSRDLKAKLE 975
L H +IQ FR D +D + + ++ T +G+TAR +A R L+ +L+
Sbjct: 1165 LDHHIIQEIKHFRID--VEDERMWKREKSKAREKTKIGFTARVDAKIRQLRGRLQ 1217
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9XIE6|ALA3_ARATH Phospholipid-transporting ATPase 3 OS=Arabidopsis thaliana GN=ALA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/932 (48%), Positives = 607/932 (65%), Gaps = 30/932 (3%)
Query: 10 FKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTK 69
FK I+CE PN +LYTF G+L +++Q PL+P QLLLR LRNT+ I GAV+FTG +TK
Sbjct: 216 FKGEIQCEQPNNSLYTFTGNLVVQKQTLPLSPDQLLLRGCSLRNTEYIVGAVVFTGHETK 275
Query: 70 VFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIAT-REDLQDGKMKRWYL 128
V N+ PSKRS +E+++DK+I +F +LV M IG+I I T RED G L
Sbjct: 276 VMMNAMNAPSKRSTLEKKLDKLIITIFCVLVTMCLIGAIGCSIVTDREDKYLG------L 329
Query: 129 RPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSI-FINQDLHMY 187
D ++ + + F T + L+ +IPISLYVSIE++K +QS FIN+DL+MY
Sbjct: 330 HNSD----WEYRNGLMIGFFTFFTLVTLFSSIIPISLYVSIEMIKFIQSTQFINRDLNMY 385
Query: 188 YEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERA 247
+ ET+ PA ARTSNLNEELGQV+ I SDKTGTLT N MEF KCSI G SYG GVTE+E+
Sbjct: 386 HAETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGVSYGCGVTEIEKG 445
Query: 248 MARRKGSPLEEEVTEEQEDKASI--KGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICH 305
+A+R G +V EEQ +I KGFNF+D R+M G+W NEP+ D+ ++ R LAICH
Sbjct: 446 IAQRHGL----KVQEEQRSTGAIREKGFNFDDPRLMRGAWRNEPNPDLCKELFRCLAICH 501
Query: 306 TALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVER- 364
T LPE DE KI Y+A SPDEAA V AA+ GF FY RT T + V E K++
Sbjct: 502 TVLPEGDESPEKIVYQAASPDEAALVTAAKNFGFFFYRRTPTMVYVRESHVEKMGKIQDV 561
Query: 365 SYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINE 424
+Y +LNVLEF+S+RKR SV+ R +G L+L KGAD+V+FERLA + + T+EH+
Sbjct: 562 AYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKGADNVIFERLANGMDDVRKVTREHLEH 621
Query: 425 YADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGAT 484
+ +GLRTL LAY++L+ + Y +NE+F +AK+++ DRE+ +E+AE IEK+LIL+G+T
Sbjct: 622 FGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSALR-DREKKLDEVAELIEKDLILIGST 680
Query: 485 AVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE 544
A+EDKLQ GVP CI+ L++AGIK+WVLTGDKMETAINI +AC+L+ M+Q +ISSET
Sbjct: 681 AIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFVISSETDA 740
Query: 545 SKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESL----GP-LALIIDGKSLTYAL 599
+ E+ D+ A +K V +L K+ L+ + SL GP L+L+IDGK L YAL
Sbjct: 741 IREAEERGDQVEIARVIKEEVKREL---KKSLEEAQHSLHTVAGPKLSLVIDGKCLMYAL 797
Query: 600 EDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD 659
+ ++ + L L++ C SV+CCR SP QKA VT LV+ TL+IGDGANDV M+Q A
Sbjct: 798 DPSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQKITLSIGDGANDVSMIQAAH 857
Query: 660 IGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTL 719
+G+GISG+EGMQAVM+SD AIAQFRFL LLLVHG W Y RI ++ YFFYKN+ F T
Sbjct: 858 VGIGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVMYFFYKNLTFTLTQ 917
Query: 720 FFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQN 779
F+F FSGQ Y+DWF SL+NV FT+LPVI LG+F++DVSA ++P LY+EG++N
Sbjct: 918 FWFTFRTGFSGQRFYDDWFQSLFNVVFTALPVIVLGLFEKDVSASLSKRYPELYREGIRN 977
Query: 780 ILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVN 839
F W + WA + V + + + F + A G+V GL + T ++TC+V VN
Sbjct: 978 SFFKWRVVAVWATSAVYQSLVCYLF-VTTSSFGAVNSSGKVFGLWDVSTMVFTCLVIAVN 1036
Query: 840 CQMALSVTYFTYIQHLFIWGGITFWYIFLLAY-GAMDPYISTTAYKVFIEACAPAPSFWL 898
++ L T ++ + G I W +F Y G M P+ I F+
Sbjct: 1037 VRILLMSNSITRWHYITVGGSILAWLVFAFVYCGIMTPHDRNENVYFVIYVLMSTFYFYF 1096
Query: 899 ITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQ 930
LLV + SLL F + ++ FFP +Q++Q
Sbjct: 1097 TLLLVPIVSLLGDFIFQGVERWFFPYDYQIVQ 1128
|
Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Required for secretory processes during plant development. Requires an interaction with an ALIS protein for activity. Has activity with phosphatidylserine, phosphatidylcholine and phosphatidylethanolamine, but not with lysolipid. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 978 | ||||||
| 224121336 | 1183 | aminophospholipid ATPase [Populus tricho | 0.989 | 0.818 | 0.836 | 0.0 | |
| 356567694 | 1189 | PREDICTED: putative phospholipid-transpo | 0.987 | 0.812 | 0.833 | 0.0 | |
| 356516900 | 1190 | PREDICTED: putative phospholipid-transpo | 0.987 | 0.811 | 0.831 | 0.0 | |
| 356513878 | 1205 | PREDICTED: putative phospholipid-transpo | 0.989 | 0.803 | 0.804 | 0.0 | |
| 255541872 | 1187 | Phospholipid-transporting ATPase, putati | 0.989 | 0.815 | 0.816 | 0.0 | |
| 225455798 | 1192 | PREDICTED: putative phospholipid-transpo | 0.993 | 0.815 | 0.810 | 0.0 | |
| 356563129 | 1217 | PREDICTED: putative phospholipid-transpo | 0.989 | 0.795 | 0.798 | 0.0 | |
| 449439369 | 1196 | PREDICTED: putative phospholipid-transpo | 0.987 | 0.807 | 0.781 | 0.0 | |
| 449486875 | 1196 | PREDICTED: LOW QUALITY PROTEIN: putative | 0.987 | 0.807 | 0.779 | 0.0 | |
| 449439677 | 1196 | PREDICTED: putative phospholipid-transpo | 0.987 | 0.807 | 0.776 | 0.0 |
| >gi|224121336|ref|XP_002318557.1| aminophospholipid ATPase [Populus trichocarpa] gi|222859230|gb|EEE96777.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1734 bits (4491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 816/975 (83%), Positives = 896/975 (91%), Gaps = 7/975 (0%)
Query: 1 MHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGA 60
+HEDS FQ+FKAIIRCEDPNANLY+F+GSL+L E Q+ L PQQLLLRDSKLRNTD IYG
Sbjct: 208 LHEDSGFQDFKAIIRCEDPNANLYSFIGSLDLGEDQHALMPQQLLLRDSKLRNTDYIYGV 267
Query: 61 VIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQD 120
VIFTG DTKV QNST PPSKRSK+E+RMDK+IY LF +LVL+SFIGSIFFGI+T+EDL+D
Sbjct: 268 VIFTGHDTKVMQNSTAPPSKRSKIEKRMDKVIYLLFFLLVLISFIGSIFFGISTKEDLED 327
Query: 121 GKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFI 180
G+MKRWYLRPD TT YYDP RA AA+LHF TALMLYGYLIPISLYVSIEIVK+LQSIFI
Sbjct: 328 GRMKRWYLRPDKTTIYYDPHRAPAAAILHFFTALMLYGYLIPISLYVSIEIVKVLQSIFI 387
Query: 181 NQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRG 240
N+DLHMY+EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCS+AGTSYGRG
Sbjct: 388 NRDLHMYHEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTSYGRG 447
Query: 241 VTEVERAMARRKGSPLEEE-------VTEEQEDKASIKGFNFEDERIMNGSWVNEPHADV 293
VTEVE+ MARRKGSPL +E V E K S+KGFNF DERI NG WVNEPHADV
Sbjct: 448 VTEVEKDMARRKGSPLPQEETEEEDIVEGVAEGKPSVKGFNFVDERITNGHWVNEPHADV 507
Query: 294 IQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHE 353
+QKFLRLLAICHTA+PE+DEE G+ISYEAESPDEAAFVIAARELGF+FYERTQTSI +HE
Sbjct: 508 VQKFLRLLAICHTAIPEIDEETGRISYEAESPDEAAFVIAARELGFKFYERTQTSILLHE 567
Query: 354 LDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGRE 413
LD V+GTKVERSY LLN++EF+SSRKRMSVIVR+E+G LLLL KGADSVMFERLA +GRE
Sbjct: 568 LDLVSGTKVERSYQLLNIIEFNSSRKRMSVIVRNEKGKLLLLCKGADSVMFERLARDGRE 627
Query: 414 FEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEK 473
FEE T+EHI EYADAGLRTL+LAYRELDE+EY +FN EFTEAKNS+SADRE++ EE+AEK
Sbjct: 628 FEEPTREHIGEYADAGLRTLVLAYRELDEEEYDEFNHEFTEAKNSLSADREDMIEEVAEK 687
Query: 474 IEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM 533
IE++LILLGATAVEDKLQNGVPECIDKLAQAGIK+WVLTGDKMETAINIGFACSLLRQGM
Sbjct: 688 IERDLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGM 747
Query: 534 RQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGK 593
+Q+IISS+TPE+K LEK EDK+A ALKASV+HQ+ GK LL +S+E+ LALIIDGK
Sbjct: 748 KQIIISSDTPENKALEKMEDKAAGVTALKASVVHQMNEGKALLTASSETSEALALIIDGK 807
Query: 594 SLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVG 653
SLTYA+EDDVK+LFLELAIGCASVICCRSSPKQKALVTRLVK+KT TTLAIGDGANDVG
Sbjct: 808 SLTYAIEDDVKNLFLELAIGCASVICCRSSPKQKALVTRLVKSKTGKTTLAIGDGANDVG 867
Query: 654 MLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNI 713
MLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNI
Sbjct: 868 MLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNI 927
Query: 714 AFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLY 773
AFGFTLFF+EAYASFSGQP YNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLY
Sbjct: 928 AFGFTLFFYEAYASFSGQPAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLY 987
Query: 774 QEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTC 833
QEGVQN+LFSW RI GWA NGV++A +IFFFCI AM+ QAFRKGGEV+GLEILG TMYTC
Sbjct: 988 QEGVQNVLFSWIRIFGWAFNGVSSAVLIFFFCIRAMEHQAFRKGGEVVGLEILGATMYTC 1047
Query: 834 VVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPA 893
VVWVVNCQMALS+ YFTYIQHLFIWGGI FWYIFL+ YGAMDPY+STTAYKVF+EACAPA
Sbjct: 1048 VVWVVNCQMALSINYFTYIQHLFIWGGIVFWYIFLMVYGAMDPYLSTTAYKVFVEACAPA 1107
Query: 894 PSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLR 953
PS+WLITLLVL+SSL+PYF YSAIQMRFFPL+HQMI W R+DGQT+DPE+C MVRQRSLR
Sbjct: 1108 PSYWLITLLVLLSSLIPYFIYSAIQMRFFPLYHQMIHWLRNDGQTEDPEYCNMVRQRSLR 1167
Query: 954 PTTVGYTARFEASSR 968
PTTVGYTAR+ A S+
Sbjct: 1168 PTTVGYTARYVAKSK 1182
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356567694|ref|XP_003552052.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1711 bits (4430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 806/967 (83%), Positives = 887/967 (91%), Gaps = 1/967 (0%)
Query: 1 MHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGA 60
+ EDS+FQNFKAII+CEDPNANLY+FVGSLELE+Q YPL+PQ LLLRDSKLRNT+ IYG
Sbjct: 212 LQEDSSFQNFKAIIKCEDPNANLYSFVGSLELEDQLYPLSPQHLLLRDSKLRNTEFIYGV 271
Query: 61 VIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQD 120
VIFTG DTKV QNST PPSKRS VE+RMDKIIYFLF +L+L+SFIGS+FFGIATREDL++
Sbjct: 272 VIFTGHDTKVMQNSTEPPSKRSTVEKRMDKIIYFLFLVLLLISFIGSVFFGIATREDLEN 331
Query: 121 GKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFI 180
G MKRWYLRPDDTT Y+DPK+A VAA+LHFLTALMLY YLIPISLYVSIE+VK+LQSIFI
Sbjct: 332 GVMKRWYLRPDDTTIYFDPKKAPVAAMLHFLTALMLYSYLIPISLYVSIEVVKVLQSIFI 391
Query: 181 NQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRG 240
NQDLHMYYEETD+PA ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAG +YG+G
Sbjct: 392 NQDLHMYYEETDRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGIAYGQG 451
Query: 241 VTEVERAMARRKGSPLEEEVTEEQE-DKASIKGFNFEDERIMNGSWVNEPHADVIQKFLR 299
VTEVERA+ARRKG P ++E+TE+ K+SIKGFNF DERIMNG+W+NEPHA+VIQ FLR
Sbjct: 452 VTEVERALARRKGVPTDQELTEDGNVPKSSIKGFNFMDERIMNGNWINEPHANVIQNFLR 511
Query: 300 LLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTG 359
LLA+CHTA+PEVD+E GK+SYEAESPDEAAFV+AARELGFEFYERTQT+IS+HE +P +G
Sbjct: 512 LLAVCHTAIPEVDDEIGKVSYEAESPDEAAFVVAARELGFEFYERTQTNISLHEFNPRSG 571
Query: 360 TKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTK 419
ERSY LLN+LEFSS+RKRMSVIVR EEG LLL SKGADSVMFERLA NGREFEE+TK
Sbjct: 572 KTTERSYKLLNILEFSSTRKRMSVIVRDEEGKLLLFSKGADSVMFERLARNGREFEEKTK 631
Query: 420 EHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLI 479
+HI EYADAGLRTLILAYRELDE+EY FNEEF EAKN VSADRE++ EEI+EKIEK+LI
Sbjct: 632 QHIEEYADAGLRTLILAYRELDEEEYNLFNEEFMEAKNLVSADREQIVEEISEKIEKDLI 691
Query: 480 LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIIS 539
LLG TAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM+Q+IIS
Sbjct: 692 LLGVTAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIIS 751
Query: 540 SETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYAL 599
S+T E+K+LEK EDKSAAA A+KASV+HQL +GKELL S+E+ LALIIDGKSLTYAL
Sbjct: 752 SDTTETKSLEKMEDKSAAAVAIKASVIHQLAKGKELLAESDENSEALALIIDGKSLTYAL 811
Query: 600 EDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD 659
EDDVKDLFLELA+GCASVICCRSSPKQKALVTRLVK KT STTLAIGDGANDVGMLQEAD
Sbjct: 812 EDDVKDLFLELAVGCASVICCRSSPKQKALVTRLVKIKTGSTTLAIGDGANDVGMLQEAD 871
Query: 660 IGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTL 719
IG+GISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTL
Sbjct: 872 IGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTL 931
Query: 720 FFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQN 779
FF+E YASFSGQ YNDW+LSLYNVFFTSLPVIALGVFDQDVSAR CLKFPLLYQEGVQN
Sbjct: 932 FFYEIYASFSGQAAYNDWYLSLYNVFFTSLPVIALGVFDQDVSARLCLKFPLLYQEGVQN 991
Query: 780 ILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVN 839
+LFSW RILGWA NGV +A IIFFFCI+AM+ QAFRK GEV LE+LG TMYTCVVWVVN
Sbjct: 992 VLFSWKRILGWAFNGVLSATIIFFFCINAMENQAFRKAGEVADLEVLGATMYTCVVWVVN 1051
Query: 840 CQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLI 899
QMALS++YFTYIQHLFIWGGI FWYIFLL YG MDP +STTAYKV IEACAPAPS+WLI
Sbjct: 1052 SQMALSISYFTYIQHLFIWGGILFWYIFLLVYGTMDPSLSTTAYKVLIEACAPAPSYWLI 1111
Query: 900 TLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGY 959
TLLVL++SLLPYF Y++IQMRFFP HQMIQW R+DGQT DPE+ +VRQRS+R TTVG+
Sbjct: 1112 TLLVLVASLLPYFAYASIQMRFFPTFHQMIQWIRNDGQTTDPEYVNIVRQRSIRHTTVGF 1171
Query: 960 TARFEAS 966
TARFEAS
Sbjct: 1172 TARFEAS 1178
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356516900|ref|XP_003527130.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1678 bits (4346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 804/967 (83%), Positives = 881/967 (91%), Gaps = 1/967 (0%)
Query: 1 MHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGA 60
+ EDS+FQNFKAII+CEDPNANLY+FVGSLELE+Q YPL+P LLLRDSKLRNT+ IYG
Sbjct: 213 LQEDSSFQNFKAIIKCEDPNANLYSFVGSLELEDQLYPLSPLHLLLRDSKLRNTEFIYGV 272
Query: 61 VIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQD 120
VIFTG DTKV QNST PPSKRS VE+RMDKIIYFLF +L L+SFIGSIFFGIATR+DL++
Sbjct: 273 VIFTGHDTKVMQNSTEPPSKRSTVEKRMDKIIYFLFLVLFLISFIGSIFFGIATRKDLEN 332
Query: 121 GKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFI 180
G MKRWYLRPDDTT Y+DPK+A VAA+LHFLTALMLY YLIPISLYVSIE+VK+LQSIFI
Sbjct: 333 GVMKRWYLRPDDTTIYFDPKKAPVAAMLHFLTALMLYSYLIPISLYVSIEVVKVLQSIFI 392
Query: 181 NQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRG 240
NQDLHMYYEE D+PA ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAG +YG+G
Sbjct: 393 NQDLHMYYEEADRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGIAYGQG 452
Query: 241 VTEVERAMARRKGSPLEEEVTEEQE-DKASIKGFNFEDERIMNGSWVNEPHADVIQKFLR 299
VTEVERA+ARR+G PL +E+TE+ K+SIKGFNF DERIM G+W+NEPHADVIQ FLR
Sbjct: 453 VTEVERALARREGVPLSQELTEDGNVPKSSIKGFNFMDERIMKGNWINEPHADVIQNFLR 512
Query: 300 LLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTG 359
LLA+CHTA+PEVDEE GK+SYEAESPDEAAFV+AARELGFEFYERTQT+IS+HE +P +G
Sbjct: 513 LLAVCHTAIPEVDEEIGKVSYEAESPDEAAFVVAARELGFEFYERTQTNISLHEFNPRSG 572
Query: 360 TKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTK 419
ERSY LLN+LEFSS+RKRMSVIVR EEG LLL SKGADSVMFERLA NGREFEE+TK
Sbjct: 573 QTTERSYKLLNILEFSSTRKRMSVIVRDEEGKLLLFSKGADSVMFERLARNGREFEEKTK 632
Query: 420 EHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLI 479
+HI+EYADAGLRTLILAYRELDE+EY FNEEF EAKN VSADRE++ EEI+EKIEK+LI
Sbjct: 633 QHIDEYADAGLRTLILAYRELDEEEYNLFNEEFMEAKNLVSADREQIVEEISEKIEKDLI 692
Query: 480 LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIIS 539
LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM+Q+IIS
Sbjct: 693 LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIIS 752
Query: 540 SETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYAL 599
S+TPE+K+LEK EDKSAAAAA+K SV+HQL GKELL S+E+ LALIIDGKSLTYAL
Sbjct: 753 SDTPETKSLEKVEDKSAAAAAVKVSVIHQLTNGKELLAESDENSEALALIIDGKSLTYAL 812
Query: 600 EDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD 659
EDDVKDLFL LA GCASVICCRSSPKQKALVTRLVK KT STTLAIGDGANDVGMLQEAD
Sbjct: 813 EDDVKDLFLTLAAGCASVICCRSSPKQKALVTRLVKVKTGSTTLAIGDGANDVGMLQEAD 872
Query: 660 IGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTL 719
IG+GISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTL
Sbjct: 873 IGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTL 932
Query: 720 FFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQN 779
FF+E YASFSGQ YNDW+LSLYNVFFTSLPVIALGVFDQDVSAR C KFPLLYQEGVQN
Sbjct: 933 FFYEIYASFSGQAAYNDWYLSLYNVFFTSLPVIALGVFDQDVSARLCHKFPLLYQEGVQN 992
Query: 780 ILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVN 839
+LFSW RILGWA NGV +A IIFFFCI+ M+ QAFRK GEV LE+LG TMYTCVVWVVN
Sbjct: 993 VLFSWKRILGWAFNGVLSATIIFFFCINGMENQAFRKAGEVADLEVLGATMYTCVVWVVN 1052
Query: 840 CQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLI 899
QMALS++YFTYIQHLFIWGGI FWYIFLL YG MDP +STTAYKV IEACAPAPS+WLI
Sbjct: 1053 SQMALSISYFTYIQHLFIWGGILFWYIFLLVYGTMDPSLSTTAYKVLIEACAPAPSYWLI 1112
Query: 900 TLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGY 959
TLLVL++SLLPYF Y++IQMRFFP HQMIQW R+DGQT DPE+ +VRQRS+R TTVG+
Sbjct: 1113 TLLVLVASLLPYFAYASIQMRFFPTFHQMIQWIRNDGQTTDPEYVNIVRQRSIRHTTVGF 1172
Query: 960 TARFEAS 966
TARFEAS
Sbjct: 1173 TARFEAS 1179
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513878|ref|XP_003525635.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1674 bits (4334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 779/968 (80%), Positives = 882/968 (91%)
Query: 1 MHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGA 60
+HEDSNFQNF+A+I+CEDPNANLYTFVGS+ELE+QQYPL PQQLLLRDSKLRNTD +YG
Sbjct: 212 LHEDSNFQNFRAVIKCEDPNANLYTFVGSMELEDQQYPLAPQQLLLRDSKLRNTDFVYGV 271
Query: 61 VIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQD 120
VIFTG DTKV QN+T PPSKRSK+E+RMDKIIY LF +L+L+SFIGSIFFGIAT +DL++
Sbjct: 272 VIFTGHDTKVMQNATDPPSKRSKIEKRMDKIIYCLFFVLILISFIGSIFFGIATNDDLEN 331
Query: 121 GKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFI 180
G+MKRWYLRPDDT YYDP AA+LHF TALMLYGYLIPISLYVSIEIVK+LQS+FI
Sbjct: 332 GRMKRWYLRPDDTEIYYDPNEPVAAAILHFFTALMLYGYLIPISLYVSIEIVKVLQSVFI 391
Query: 181 NQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRG 240
NQD+HMYYEETDKPA ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAG +YG+
Sbjct: 392 NQDVHMYYEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGQR 451
Query: 241 VTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRL 300
VTEVERA++ R S + + + E K+SIKGFNF DER+MNG+W+ EP+A+VIQ FL+L
Sbjct: 452 VTEVERALSGRHESHPGQVLEKISESKSSIKGFNFMDERVMNGNWIKEPNANVIQNFLQL 511
Query: 301 LAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGT 360
LA+CHTA+PEVDEE GK+SYEAESPDEAAFVIAARELGFEFYERT T+IS+HELDP++G
Sbjct: 512 LAVCHTAIPEVDEETGKVSYEAESPDEAAFVIAARELGFEFYERTHTTISLHELDPISGQ 571
Query: 361 KVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKE 420
K+ RSY LLN+LEF+S+RKRMSVIVR EG LLLLSKGADSVMFER+A+NGR+FEE+TK+
Sbjct: 572 KINRSYKLLNILEFTSARKRMSVIVRDAEGKLLLLSKGADSVMFERIAKNGRDFEEKTKQ 631
Query: 421 HINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLIL 480
HI+EYAD+GLRTLILAYREL+E+EY +F++EFTEAKN VS D+E++ E I + IEK+LIL
Sbjct: 632 HISEYADSGLRTLILAYRELNEEEYNKFSKEFTEAKNLVSEDQEQIVEGIVQNIEKDLIL 691
Query: 481 LGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISS 540
LGATAVEDKLQ+GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM+Q+IISS
Sbjct: 692 LGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISS 751
Query: 541 ETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALE 600
+TPE+K+LEK EDKSAA AA+K+SVL QL K LL +S+E+ LALIIDGKSLTYALE
Sbjct: 752 DTPETKSLEKMEDKSAAEAAIKSSVLRQLREAKALLSTSDENYEALALIIDGKSLTYALE 811
Query: 601 DDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADI 660
DDVKDLFLELAIGCASVICCRSSPKQKALVTRLVK +T STTLAIGDGANDVGMLQEADI
Sbjct: 812 DDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKMRTGSTTLAIGDGANDVGMLQEADI 871
Query: 661 GVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 720
G+GISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF
Sbjct: 872 GIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 931
Query: 721 FFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNI 780
FFE YASFSGQ YNDWF+SLYNVFFTSLPVIALGVFDQDVS++ CLKFPLLYQEGVQNI
Sbjct: 932 FFEIYASFSGQAAYNDWFMSLYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGVQNI 991
Query: 781 LFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNC 840
LFSW RI+GWALNGV +AI+FFFCI +M+ QAFRKGGEV+GLE+LG TMYTCVVWVVNC
Sbjct: 992 LFSWKRIIGWALNGVVTSAIVFFFCIRSMEYQAFRKGGEVMGLEVLGATMYTCVVWVVNC 1051
Query: 841 QMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLIT 900
QMALS++YFTYIQH+FIWG I FWYIFLLAYGA+DP STTAYKVFIEA APAP FW+IT
Sbjct: 1052 QMALSISYFTYIQHIFIWGSILFWYIFLLAYGAIDPSFSTTAYKVFIEALAPAPFFWIIT 1111
Query: 901 LLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYT 960
LL+L++SLLPYF Y++IQMRFFP++HQMIQW R+D QT DPE+C +VRQRS+R TTVG+T
Sbjct: 1112 LLILIASLLPYFIYASIQMRFFPMYHQMIQWMRNDRQTSDPEYCNVVRQRSIRHTTVGFT 1171
Query: 961 ARFEASSR 968
AR EAS R
Sbjct: 1172 ARLEASKR 1179
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255541872|ref|XP_002512000.1| Phospholipid-transporting ATPase, putative [Ricinus communis] gi|223549180|gb|EEF50669.1| Phospholipid-transporting ATPase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1669 bits (4321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 796/975 (81%), Positives = 871/975 (89%), Gaps = 7/975 (0%)
Query: 1 MHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGA 60
+ EDS+F +FK++IRCEDPNANLY+F+GS EL EQQYPL+PQQLLLRDSKLRNT IYG
Sbjct: 212 LQEDSSFHDFKSLIRCEDPNANLYSFIGSFELGEQQYPLSPQQLLLRDSKLRNTYFIYGV 271
Query: 61 VIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQD 120
VIFTG DTKV QNST PPSKRSK+ERR DK+IY LF ILVLMSFIGSIFFGIATRED+++
Sbjct: 272 VIFTGHDTKVMQNSTAPPSKRSKIERRTDKVIYLLFFILVLMSFIGSIFFGIATREDIEN 331
Query: 121 GKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFI 180
GKMKRWYLRPD TT YYDPKRA AA+LHFLTALMLY YLIPISLYVSIEIVK+LQSIFI
Sbjct: 332 GKMKRWYLRPDHTTVYYDPKRAPAAAILHFLTALMLYSYLIPISLYVSIEIVKVLQSIFI 391
Query: 181 NQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRG 240
NQDLHMY+EE DKPARARTSNLNEELGQVDTILSDKTGTLTCNSME IK S+AGTSYGRG
Sbjct: 392 NQDLHMYFEEGDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMELIKFSVAGTSYGRG 451
Query: 241 VTEVERAMARRKGSPLEEE-------VTEEQEDKASIKGFNFEDERIMNGSWVNEPHADV 293
+TEVE+AMARRKGSPL +E V E+ E S KG+NF DERI +G WVNEP ADV
Sbjct: 452 ITEVEKAMARRKGSPLPQEEIEGDTDVEEQTEQTISTKGYNFVDERISDGHWVNEPCADV 511
Query: 294 IQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHE 353
IQKFLRLLAICHTA+PE DEE G+ISYEAESPDEAAFVIAARELGFEF+ERTQ SIS+ E
Sbjct: 512 IQKFLRLLAICHTAIPESDEETGRISYEAESPDEAAFVIAARELGFEFFERTQASISLLE 571
Query: 354 LDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGRE 413
LDPVTG KV R Y LLNV+EF+SSRKRMSVIVR E G LLLL KGADS+MFERLA+NGRE
Sbjct: 572 LDPVTGQKVTRYYQLLNVIEFTSSRKRMSVIVRDEGGKLLLLCKGADSIMFERLAKNGRE 631
Query: 414 FEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEK 473
FE +TKEHI+EYADAGLRTL+LAYRELDE+EY +F++EF EAK+ +SADREE EE+A +
Sbjct: 632 FEGKTKEHISEYADAGLRTLVLAYRELDEEEYNEFSQEFNEAKSLLSADREETIEEVAAR 691
Query: 474 IEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM 533
IE++LILLGATAVEDKLQ GVPECIDKLAQAGIK+WVLTGDKMETAINIGFACSLLRQGM
Sbjct: 692 IERDLILLGATAVEDKLQQGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGM 751
Query: 534 RQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGK 593
+QVIISSET E+KTL+K EDK AA A KASVL Q+ GK LL +S+ESL LALIIDG
Sbjct: 752 KQVIISSETSENKTLQKMEDKDAADVASKASVLRQINEGKALLGASSESLEALALIIDGN 811
Query: 594 SLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVG 653
SL YAL+DDVKD FLELAIGCASVICCRSSPKQKALVTRLVKTKT STTLAIGDGANDVG
Sbjct: 812 SLAYALQDDVKDEFLELAIGCASVICCRSSPKQKALVTRLVKTKTGSTTLAIGDGANDVG 871
Query: 654 MLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNI 713
MLQEADIGVGISGVEGMQA+MSSD AIAQFR+LERLLLVHGHWCYRRISSMICYFFYKNI
Sbjct: 872 MLQEADIGVGISGVEGMQAIMSSDFAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNI 931
Query: 714 AFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLY 773
AFGFTLFF+EAYASFSGQ YNDWFLSLYNVFFTSLPVIALGVFDQDVSAR+CLKFPLLY
Sbjct: 932 AFGFTLFFYEAYASFSGQAAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARYCLKFPLLY 991
Query: 774 QEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTC 833
QEGVQN+LFSW +I+GW NG+ +A +IFFFCI AM+ QAF KGG+V LEILG TMYTC
Sbjct: 992 QEGVQNVLFSWQQIIGWVFNGILSATLIFFFCISAMENQAFYKGGKVADLEILGATMYTC 1051
Query: 834 VVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPA 893
+V VVNCQMALS+ YFTYIQHLFIWGGI FWY+FLLAYGAMDPYISTTAYKVFIEACAPA
Sbjct: 1052 IVCVVNCQMALSINYFTYIQHLFIWGGIIFWYLFLLAYGAMDPYISTTAYKVFIEACAPA 1111
Query: 894 PSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLR 953
PS+WLIT VL+SSLLPYF YSAIQMRFFPL+HQMI W R+DGQT+DPE+C ++RQRSLR
Sbjct: 1112 PSYWLITFFVLISSLLPYFAYSAIQMRFFPLYHQMILWIRNDGQTEDPEYCNVIRQRSLR 1171
Query: 954 PTTVGYTARFEASSR 968
TTVGYTARF R
Sbjct: 1172 HTTVGYTARFSKRER 1186
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225455798|ref|XP_002271424.1| PREDICTED: putative phospholipid-transporting ATPase 9-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1667 bits (4316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 793/979 (81%), Positives = 883/979 (90%), Gaps = 7/979 (0%)
Query: 3 EDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVI 62
+DS F+NF+AII+CEDPNANLY+FVG+L+LEEQQ+PLTPQQLLLRDSKLRNTD IYG VI
Sbjct: 214 DDSRFENFRAIIKCEDPNANLYSFVGNLQLEEQQFPLTPQQLLLRDSKLRNTDYIYGVVI 273
Query: 63 FTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGK 122
FTG DTKV QNST PPSKRSK+ERRMDK++Y LF LV +SFIGS+FFGI T EDL++G
Sbjct: 274 FTGHDTKVIQNSTAPPSKRSKIERRMDKLVYLLFSALVFLSFIGSVFFGITTSEDLENGV 333
Query: 123 MKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQ 182
M RWYLRPDDTT YYDPKRA VAA+LHFLTALMLYGYLIPISLYVSIEIVK+LQS+FINQ
Sbjct: 334 MTRWYLRPDDTTIYYDPKRAPVAAILHFLTALMLYGYLIPISLYVSIEIVKVLQSVFINQ 393
Query: 183 DLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVT 242
D HMYYEE DKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGT+YGRG+T
Sbjct: 394 DPHMYYEEGDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTAYGRGIT 453
Query: 243 EVERAMARRKGSPLEEEVTEEQ-------EDKASIKGFNFEDERIMNGSWVNEPHADVIQ 295
EVERA AR K +PL +EV E++ E K SIKG+NF DERI NG+WVNEP ADVIQ
Sbjct: 454 EVERAQARGKETPLAQEVVEDKDNVEEITETKPSIKGYNFIDERITNGNWVNEPRADVIQ 513
Query: 296 KFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELD 355
FLRLLA+CHTA+PEVD+E GKISYEAESPDEAAFVI ARELGFEFYERTQTSIS+HELD
Sbjct: 514 NFLRLLAVCHTAIPEVDDETGKISYEAESPDEAAFVIGARELGFEFYERTQTSISLHELD 573
Query: 356 PVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFE 415
P++G KV R+Y L+N++EFSS+RKRMSVIVR+EEG LLLLSKGADSVMFERLA++GREFE
Sbjct: 574 PMSGRKVARTYKLMNIIEFSSARKRMSVIVRNEEGRLLLLSKGADSVMFERLAQDGREFE 633
Query: 416 EQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIE 475
QT+ HINEYADAGLRTL+LAYRELD++EY +FNEEF++AKN VSADREE+ EE+AE+IE
Sbjct: 634 VQTRLHINEYADAGLRTLVLAYRELDDEEYNEFNEEFSQAKNLVSADREEIIEEVAERIE 693
Query: 476 KNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQ 535
K+LILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM+Q
Sbjct: 694 KDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQ 753
Query: 536 VIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSL 595
+II+SETP K LEK+ DKSA A KA+V+ Q+ GK LL+ ++E LALIIDGKSL
Sbjct: 754 IIINSETPGIKALEKAGDKSAVDEAAKANVIQQISEGKALLNIASEDSEALALIIDGKSL 813
Query: 596 TYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGML 655
YALEDDVKD+FLELAIGCASVICCRSSPKQKALVTRLVK KT STTLAIGDGANDVGML
Sbjct: 814 IYALEDDVKDMFLELAIGCASVICCRSSPKQKALVTRLVKVKTGSTTLAIGDGANDVGML 873
Query: 656 QEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAF 715
QEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAF
Sbjct: 874 QEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAF 933
Query: 716 GFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQE 775
GFTLFFFEAYASFSGQ YNDW+LSLYNVFFTSLPVIA+GVFDQDV+ARFCLKFPLLYQE
Sbjct: 934 GFTLFFFEAYASFSGQAAYNDWYLSLYNVFFTSLPVIAMGVFDQDVAARFCLKFPLLYQE 993
Query: 776 GVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVV 835
GVQN+LFSWTRILGWA NGV ++ +IFFFC AM+ QAFRKGGEV+G+EI G MYTCVV
Sbjct: 994 GVQNVLFSWTRILGWAFNGVLSSTLIFFFCACAMEHQAFRKGGEVVGMEIFGAVMYTCVV 1053
Query: 836 WVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPS 895
WVVNCQMALS+ YFT IQH+FIWG I FWYIFLL YGAMDP ISTTAY+VFIEACAPA S
Sbjct: 1054 WVVNCQMALSINYFTLIQHVFIWGSIVFWYIFLLVYGAMDPNISTTAYQVFIEACAPALS 1113
Query: 896 FWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPT 955
FWL+TL V +++LLPYF+Y+AIQMRFFP++HQMIQW R+DG ++DPE+CQMVRQRSLR T
Sbjct: 1114 FWLVTLFVTVATLLPYFSYAAIQMRFFPMYHQMIQWIRNDGHSEDPEYCQMVRQRSLRST 1173
Query: 956 TVGYTARFEASSRDLKAKL 974
TVGYTARF S +L ++
Sbjct: 1174 TVGYTARFSRSKLELPEQI 1192
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356563129|ref|XP_003549818.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1666 bits (4315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 773/968 (79%), Positives = 878/968 (90%)
Query: 1 MHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGA 60
+ EDSN QNF+A+I+CEDPNANLYTFVGS+EL +QQYPL PQQLLLRDSKLRNTD +YG
Sbjct: 212 LQEDSNVQNFRAVIKCEDPNANLYTFVGSMELGDQQYPLAPQQLLLRDSKLRNTDFVYGV 271
Query: 61 VIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQD 120
VIFTG DTKV QN+T PPSKRSK+E+RMDKIIY LF +L+L+SFIGSIFFGIAT +DL++
Sbjct: 272 VIFTGHDTKVMQNATDPPSKRSKIEKRMDKIIYCLFFVLILISFIGSIFFGIATNDDLEN 331
Query: 121 GKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFI 180
G+MKRWYLRPDDT YYDP AA+LHF TALMLY YLIPISLYVSIEIVK+LQS+FI
Sbjct: 332 GRMKRWYLRPDDTEIYYDPNEPVAAAILHFFTALMLYSYLIPISLYVSIEIVKVLQSVFI 391
Query: 181 NQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRG 240
NQD+HMYYEETDKPA ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAG +YGRG
Sbjct: 392 NQDVHMYYEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRG 451
Query: 241 VTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRL 300
VTEVERA++RR S +E+ + E K+SIKGFNF DER+MNG+W+ EP+A+VIQ FLRL
Sbjct: 452 VTEVERALSRRHESHPGQELKKISESKSSIKGFNFMDERVMNGNWIKEPNANVIQNFLRL 511
Query: 301 LAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGT 360
LA+CHTA+PEVDEE GK+SYEAESPDEAAFVIAARELGFEFYERT T+IS+ ELD ++G
Sbjct: 512 LAVCHTAIPEVDEETGKVSYEAESPDEAAFVIAARELGFEFYERTHTTISLRELDTISGQ 571
Query: 361 KVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKE 420
K+ RSY LLN+LEF+S+RKRMSVIV+ EEG LLLLSKGADSVMFE++A+NGR+FEE+TK+
Sbjct: 572 KINRSYKLLNILEFTSARKRMSVIVKDEEGKLLLLSKGADSVMFEQIAKNGRDFEEKTKQ 631
Query: 421 HINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLIL 480
HI EYAD+GLRTLILAYREL+++EY +FN+EFTEAKN VS D+E++ E I + IEK+LIL
Sbjct: 632 HIAEYADSGLRTLILAYRELNDEEYNKFNKEFTEAKNLVSEDQEQIVEGIIQNIEKDLIL 691
Query: 481 LGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISS 540
LGATAVEDKLQ+GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM+Q+IISS
Sbjct: 692 LGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISS 751
Query: 541 ETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALE 600
+TPE+K+LEK EDKSAA AA+K+SVL QL K LL +++E+ LALIIDGKSLTYALE
Sbjct: 752 DTPETKSLEKMEDKSAAEAAIKSSVLRQLRESKALLSTADENYEALALIIDGKSLTYALE 811
Query: 601 DDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADI 660
DDVKDLFLELAIGCASVICCRSSPKQKALVTRLVK +T STTLAIGDGANDVGMLQEADI
Sbjct: 812 DDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKMRTGSTTLAIGDGANDVGMLQEADI 871
Query: 661 GVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 720
G+GISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF
Sbjct: 872 GIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 931
Query: 721 FFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNI 780
FFE YASFSGQ YNDWF+SLYNVFFTSLPVIALGVFDQDVS++ CLKFPLLYQEG QNI
Sbjct: 932 FFEMYASFSGQAAYNDWFMSLYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGTQNI 991
Query: 781 LFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNC 840
LFSW RI+GWALNGV +AI+FFFCI +M+ QAFRKGGEV+GLE+LG TMYTCVVWVVNC
Sbjct: 992 LFSWKRIIGWALNGVVTSAIVFFFCIRSMEYQAFRKGGEVMGLEVLGATMYTCVVWVVNC 1051
Query: 841 QMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLIT 900
QMALS++YFTYIQH+FIWG I FWYIFLLAYGA+DP STTAYKVFIEA APAPSFW++T
Sbjct: 1052 QMALSISYFTYIQHIFIWGSILFWYIFLLAYGAIDPSFSTTAYKVFIEALAPAPSFWIVT 1111
Query: 901 LLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYT 960
L+L++SLLPYF Y++IQ+RFFP++HQMIQW R+D QT DPE+C +VRQRS+R TTVG+T
Sbjct: 1112 FLILIASLLPYFVYASIQLRFFPMYHQMIQWMRNDRQTSDPEYCNVVRQRSIRHTTVGFT 1171
Query: 961 ARFEASSR 968
AR EAS R
Sbjct: 1172 ARLEASKR 1179
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449439369|ref|XP_004137458.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1629 bits (4218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 760/972 (78%), Positives = 864/972 (88%), Gaps = 6/972 (0%)
Query: 1 MHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGA 60
+H+DS+FQNFKA I+CEDPNANLY+FVGS+ LEEQQ+PL+PQQLLLRDSKLRNTD +YG
Sbjct: 213 LHDDSSFQNFKATIKCEDPNANLYSFVGSMLLEEQQHPLSPQQLLLRDSKLRNTDFVYGV 272
Query: 61 VIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQD 120
VIFTG DTKV QNST PPSKRSK+E+RMDKI++FLFG+LVL+S +GSIFFG+ TR+DL++
Sbjct: 273 VIFTGHDTKVIQNSTDPPSKRSKIEKRMDKIVFFLFGVLVLLSVVGSIFFGVKTRDDLEN 332
Query: 121 GKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFI 180
G+ RWYLRPDDTT YYDPK A AAVL FLTALML+ YLIPISLYVSIEIVK+LQS+FI
Sbjct: 333 GRATRWYLRPDDTTIYYDPKNAPAAAVLQFLTALMLFSYLIPISLYVSIEIVKVLQSVFI 392
Query: 181 NQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRG 240
NQDLHMY+EETDKPA ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCS+ GT+YGRG
Sbjct: 393 NQDLHMYHEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVGGTAYGRG 452
Query: 241 VTEVERAMARRKGSPLEEEVTEEQE----DKASIKGFNFEDERIMNGSWVNEPHADVIQK 296
+TEVERA+ARRK S L + + +K +KGFNF+DER+M+G+WV EP A+VIQK
Sbjct: 453 ITEVERALARRKESTLPQNFGADNARLSGEKTFVKGFNFKDERMMDGNWVKEPRANVIQK 512
Query: 297 FLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDP 356
FL+LLAICHTALPE+DEE GKISYEAESPDEAAFVIAARE GFEFYER+QTSIS+ E DP
Sbjct: 513 FLQLLAICHTALPEIDEETGKISYEAESPDEAAFVIAAREFGFEFYERSQTSISLREFDP 572
Query: 357 VTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEE 416
+ KVERSY LL+VLEF+S+RKRMSVI+R +G LLLL KGADSVMFERLA+NG EFEE
Sbjct: 573 TSAKKVERSYQLLDVLEFNSTRKRMSVIIRDSKGKLLLLCKGADSVMFERLAKNGNEFEE 632
Query: 417 QTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEK 476
QTK HINEYADAGLRTL+LAYREL E+E+ F++EF +AKN+VS R+++ +++ E IEK
Sbjct: 633 QTKVHINEYADAGLRTLVLAYRELKEEEFNAFHQEFIKAKNTVSTGRDDIIDQLTESIEK 692
Query: 477 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQV 536
+LILLGATAVEDKLQNGVPECIDKLAQAGIK+WVLTGDKMETAINIGFACSLLRQGM+Q+
Sbjct: 693 DLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQI 752
Query: 537 IISSETPESKTLEKSED--KSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKS 594
IISSETPE K L+K ED KSAA A K SV+ Q+ K LL SS E+ LALIIDGKS
Sbjct: 753 IISSETPEGKALDKVEDVHKSAAIKAFKTSVIQQITDAKALLTSSTETPETLALIIDGKS 812
Query: 595 LTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGM 654
LTYALEDDVKDLFLELAIGCASVICCRSSPKQKA VT++VK KT STTLA+GDGANDVGM
Sbjct: 813 LTYALEDDVKDLFLELAIGCASVICCRSSPKQKAQVTQMVKVKTGSTTLAVGDGANDVGM 872
Query: 655 LQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIA 714
+QEADIG+GISGVEGMQAVMSSDIAIAQFR+LERLLLVHGHWCYRRISSMICYFFYKNI
Sbjct: 873 IQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNIV 932
Query: 715 FGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQ 774
FGFTLFFFE YASFSGQ VYNDWFLSLYNVFFTSLPVIALGVFDQDVS+R+CLKF LLYQ
Sbjct: 933 FGFTLFFFEMYASFSGQTVYNDWFLSLYNVFFTSLPVIALGVFDQDVSSRYCLKFSLLYQ 992
Query: 775 EGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCV 834
EGVQN+LFSW RI GW NG+ ++ IIFFFC+ AM QAFR GEV+GLEILG TMYTCV
Sbjct: 993 EGVQNVLFSWVRIFGWVFNGLLSSVIIFFFCVGAMDYQAFRNSGEVVGLEILGVTMYTCV 1052
Query: 835 VWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAP 894
VWVVNCQMALS++YFTYIQHLFIWG I WY+FL+AYGA++P ISTTA++VFIEACAPAP
Sbjct: 1053 VWVVNCQMALSISYFTYIQHLFIWGSIVLWYLFLMAYGAINPTISTTAFQVFIEACAPAP 1112
Query: 895 SFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRP 954
SFW++TLL L +SLLPYF + +IQMRFFP++HQMIQW ++DGQ +DPE+CQ+VRQRSLR
Sbjct: 1113 SFWILTLLALGASLLPYFVFGSIQMRFFPMYHQMIQWIKADGQLNDPEYCQVVRQRSLRH 1172
Query: 955 TTVGYTARFEAS 966
TTVGYTARFEAS
Sbjct: 1173 TTVGYTARFEAS 1184
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449486875|ref|XP_004157428.1| PREDICTED: LOW QUALITY PROTEIN: putative phospholipid-transporting ATPase 9-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1625 bits (4209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 758/972 (77%), Positives = 864/972 (88%), Gaps = 6/972 (0%)
Query: 1 MHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGA 60
+H+DS+FQNFKA I+CEDPNANLY+FVGS+ LEEQQ+PL+PQQLLLRDSKLRNTD +YG
Sbjct: 213 LHDDSSFQNFKATIKCEDPNANLYSFVGSMLLEEQQHPLSPQQLLLRDSKLRNTDFVYGV 272
Query: 61 VIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQD 120
VIFTG DTKV QNST PPSKRSK+E+RMDKI++FLFG+LVL+S +GSIFFG+ TR+DL++
Sbjct: 273 VIFTGHDTKVIQNSTDPPSKRSKIEKRMDKIVFFLFGVLVLLSVVGSIFFGVKTRDDLEN 332
Query: 121 GKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFI 180
G+ RWYLRPDDTT YYDPK A AAVL FLTALML+ YLIPISLYVSIEIVK+LQS+FI
Sbjct: 333 GRATRWYLRPDDTTIYYDPKNAPAAAVLQFLTALMLFSYLIPISLYVSIEIVKVLQSVFI 392
Query: 181 NQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRG 240
NQDLHMY+EETDKPA ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCS+ GT+YGRG
Sbjct: 393 NQDLHMYHEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVGGTAYGRG 452
Query: 241 VTEVERAMARRKGSPLEEEVTEEQE----DKASIKGFNFEDERIMNGSWVNEPHADVIQK 296
+TEVERA+ARRK S L + + +K +KGFNF+DER+M+G+WV EP A+VIQK
Sbjct: 453 ITEVERALARRKESTLPQNFGADNARLSGEKXFVKGFNFKDERMMDGNWVKEPRANVIQK 512
Query: 297 FLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDP 356
FL+LLAICHTALPE+DEE GKISYEAESPDEAAFVIAARE GFEFYER+QTSIS+ E DP
Sbjct: 513 FLQLLAICHTALPEIDEETGKISYEAESPDEAAFVIAAREFGFEFYERSQTSISLREFDP 572
Query: 357 VTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEE 416
+ KVERSY LL+VLEF+S+RKRMSVI+R + G LLLL KGADSVMFERLA+N EFEE
Sbjct: 573 TSAKKVERSYQLLDVLEFNSTRKRMSVIIRDQRGKLLLLCKGADSVMFERLAKNRCEFEE 632
Query: 417 QTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEK 476
QTK H+NEYADAGLRTL+LAYREL E+E+ F++EF +AKN+VS DR+++ +++ E +EK
Sbjct: 633 QTKVHVNEYADAGLRTLVLAYRELKEEEFNSFHQEFIKAKNTVSTDRDDIIDQLTESVEK 692
Query: 477 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQV 536
+LILLGATAVEDKLQNGVPECIDKLAQAGIK+WVLTGDKMETAINIGFACSLLRQGM+Q+
Sbjct: 693 DLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQI 752
Query: 537 IISSETPESKTLEKSED--KSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKS 594
IISSETPE K L+K ED KSAA A K SV Q+ K LL SS+E+ LALIIDGKS
Sbjct: 753 IISSETPEGKALDKVEDDHKSAAIKAFKTSVTQQITDAKALLTSSSETPETLALIIDGKS 812
Query: 595 LTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGM 654
LTYALEDDVKDLFLELAIGCASVICCRSSPKQKA VT++VK KT STTLA+GDGANDVGM
Sbjct: 813 LTYALEDDVKDLFLELAIGCASVICCRSSPKQKAQVTQMVKVKTGSTTLAVGDGANDVGM 872
Query: 655 LQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIA 714
+QEADIG+GISGVEGMQAVMSSDIAIAQFR+LERLLLVHGHWCYRRISSMICYFFYKNI
Sbjct: 873 IQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNIV 932
Query: 715 FGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQ 774
FGFTLFFFE YASFSGQ VYNDWFLSLYNVFFTSLPVIALGVFDQDVS+R+CLKF LLYQ
Sbjct: 933 FGFTLFFFEMYASFSGQTVYNDWFLSLYNVFFTSLPVIALGVFDQDVSSRYCLKFSLLYQ 992
Query: 775 EGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCV 834
EGVQN+LFSW RI GW NG+ ++ IIFFFC+ AM QAFR GEV+GLEILG TMYTCV
Sbjct: 993 EGVQNVLFSWVRIXGWVFNGLLSSVIIFFFCVGAMDYQAFRNSGEVVGLEILGVTMYTCV 1052
Query: 835 VWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAP 894
VWVVNCQMALS++YFTYIQHLFIWG I WY+FL+AYGA++P ISTTA++VFIEACAPAP
Sbjct: 1053 VWVVNCQMALSISYFTYIQHLFIWGSIVLWYLFLMAYGAINPTISTTAFQVFIEACAPAP 1112
Query: 895 SFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRP 954
SFW++TLL L +SLLPYF + +IQMRFFP++HQMIQW ++DGQ +DPE+CQ+VRQRSLR
Sbjct: 1113 SFWILTLLALGASLLPYFVFGSIQMRFFPMYHQMIQWIKADGQLNDPEYCQVVRQRSLRH 1172
Query: 955 TTVGYTARFEAS 966
TTVGYTARFEAS
Sbjct: 1173 TTVGYTARFEAS 1184
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449439677|ref|XP_004137612.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1624 bits (4205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 755/972 (77%), Positives = 864/972 (88%), Gaps = 6/972 (0%)
Query: 1 MHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGA 60
+H+DS+FQNFKA I+CEDPNANLY+FVGS+ LEEQQ+PL+PQQLLLRDSKLRNTD +YG
Sbjct: 213 LHDDSSFQNFKATIKCEDPNANLYSFVGSMLLEEQQHPLSPQQLLLRDSKLRNTDFVYGV 272
Query: 61 VIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQD 120
VIFTG DTKV QNST PPSKRSK+E+RMDKI++FLF +LVL+S +GSIFFG+ TR+DL++
Sbjct: 273 VIFTGHDTKVIQNSTDPPSKRSKIEKRMDKIVFFLFAVLVLLSVVGSIFFGVKTRDDLEN 332
Query: 121 GKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFI 180
G+ RWYLRPDDTT YY+PK A AAVL FLTALML+ YLIPISLYVSIEIVK+LQS+FI
Sbjct: 333 GRATRWYLRPDDTTTYYNPKNAPAAAVLQFLTALMLFSYLIPISLYVSIEIVKVLQSVFI 392
Query: 181 NQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRG 240
NQDLHMY+EETDKPA ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCS+ GT+YGRG
Sbjct: 393 NQDLHMYHEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVGGTAYGRG 452
Query: 241 VTEVERAMARRKGSPLEEEVTEEQE----DKASIKGFNFEDERIMNGSWVNEPHADVIQK 296
+TEVERA+ARRK S L + + +K +KGFNF+DER+M+G+WV EP A+VIQK
Sbjct: 453 ITEVERALARRKESTLPQNFGADNARLSGEKTFVKGFNFKDERMMDGNWVKEPRANVIQK 512
Query: 297 FLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDP 356
FL+LLAICHTALPE+DE+ GKISYEAESPDEAAFVIAARE GFEFYER+QTSIS+ E DP
Sbjct: 513 FLQLLAICHTALPEIDEKTGKISYEAESPDEAAFVIAAREFGFEFYERSQTSISLREFDP 572
Query: 357 VTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEE 416
+ KVERSY LL+VLEF+S+RKRMSVI+R +G LLLL KGADSVMFERLA+N EFEE
Sbjct: 573 TSAKKVERSYQLLDVLEFNSTRKRMSVIIRDSKGKLLLLCKGADSVMFERLAKNRCEFEE 632
Query: 417 QTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEK 476
QTK H+NEYADAGLRTL+LAYREL E+E+ F++EF +AKN+VS DR+++ +++ E +EK
Sbjct: 633 QTKVHVNEYADAGLRTLVLAYRELKEEEFNSFHQEFIKAKNTVSTDRDDIIDQLTESVEK 692
Query: 477 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQV 536
+LILLGATAVEDKLQNGVPECIDKLAQAGIK+WVLTGDKMETAINIGFACSLLRQGM+Q+
Sbjct: 693 DLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQI 752
Query: 537 IISSETPESKTLEKSED--KSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKS 594
IISSETPE K L+K ED KSAA A K SV+ Q+ K LL SS+E+ LALIIDGKS
Sbjct: 753 IISSETPEGKALDKVEDVHKSAAIKAFKTSVIQQITDAKALLTSSSETPETLALIIDGKS 812
Query: 595 LTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGM 654
LTYALEDDVKDLFLELAIGCASVICCRSSPKQKA VT++VK KT STTLA+GDGANDVGM
Sbjct: 813 LTYALEDDVKDLFLELAIGCASVICCRSSPKQKAQVTQMVKVKTGSTTLAVGDGANDVGM 872
Query: 655 LQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIA 714
+QEADIG+GISGVEGMQAVMSSDIAIAQFR+LERLLLVHGHWCYRRISSMICYFFYKNI
Sbjct: 873 IQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNIV 932
Query: 715 FGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQ 774
FGFTLFFFE YASFSGQ VYNDWFLSLYNVFFTSLPVIALGVFDQDVS+R+CLKF LLYQ
Sbjct: 933 FGFTLFFFEMYASFSGQTVYNDWFLSLYNVFFTSLPVIALGVFDQDVSSRYCLKFSLLYQ 992
Query: 775 EGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCV 834
EGVQN+LFSW RI GW NG+ ++ IIFFFC+ AM QAFR GEV+GLEILG TMYTCV
Sbjct: 993 EGVQNVLFSWVRIFGWVFNGLLSSVIIFFFCVGAMDYQAFRNSGEVVGLEILGVTMYTCV 1052
Query: 835 VWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAP 894
VWVVNCQMALS++YFTYIQHLFIWG I WY+FL+AYGA++P ISTTA++VFIEACAPAP
Sbjct: 1053 VWVVNCQMALSISYFTYIQHLFIWGSIVLWYLFLMAYGAINPTISTTAFQVFIEACAPAP 1112
Query: 895 SFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRP 954
SFW++TLL L +SLLPYF + +IQMRFFP++HQMIQW ++DGQ +DPE+CQ+VRQRSLR
Sbjct: 1113 SFWILTLLALGASLLPYFVFGSIQMRFFPMYHQMIQWIKADGQLNDPEYCQVVRQRSLRH 1172
Query: 955 TTVGYTARFEAS 966
TTVGYTARFEAS
Sbjct: 1173 TTVGYTARFEAS 1184
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 978 | ||||||
| TAIR|locus:2026900 | 1200 | AT1G68710 [Arabidopsis thalian | 0.990 | 0.807 | 0.690 | 0.0 | |
| TAIR|locus:2102345 | 1202 | AT3G25610 [Arabidopsis thalian | 0.998 | 0.812 | 0.684 | 0.0 | |
| TAIR|locus:2031860 | 1203 | ACA.l "autoinhibited Ca2+/ATPa | 0.998 | 0.812 | 0.678 | 0.0 | |
| TAIR|locus:2088217 | 1243 | AT3G13900 [Arabidopsis thalian | 0.715 | 0.563 | 0.555 | 6e-293 | |
| TAIR|locus:2030180 | 1228 | AT1G72700 [Arabidopsis thalian | 0.716 | 0.570 | 0.562 | 1e-290 | |
| TAIR|locus:2007858 | 1216 | AT1G17500 [Arabidopsis thalian | 0.976 | 0.785 | 0.550 | 8.4e-287 | |
| TAIR|locus:2020038 | 1240 | AT1G54280 [Arabidopsis thalian | 0.751 | 0.592 | 0.521 | 1.3e-286 | |
| TAIR|locus:2025961 | 1213 | ALA3 "aminophospholipid ATPase | 0.948 | 0.765 | 0.442 | 5.6e-203 | |
| DICTYBASE|DDB_G0269380 | 1313 | DDB_G0269380 "P-type ATPase" [ | 0.529 | 0.394 | 0.404 | 2.8e-187 | |
| UNIPROTKB|F1LS08 | 1168 | Atp8b4 "Protein Atp8b4" [Rattu | 0.922 | 0.772 | 0.398 | 1.4e-165 |
| TAIR|locus:2026900 AT1G68710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3554 (1256.1 bits), Expect = 0., P = 0.
Identities = 677/981 (69%), Positives = 783/981 (79%)
Query: 1 MHEDSNFQNFKAIIRCEDPNANLYTFVGSXXXXXXXXXXXXXXXXXRDSKLRNTDCIYGA 60
+ ++ NF+ F+A ++CEDPNANLY+FVG+ RDSKLRNTD I+GA
Sbjct: 216 LRDEFNFKGFEAFVKCEDPNANLYSFVGTMELKGAKYPLSPQQLLLRDSKLRNTDFIFGA 275
Query: 61 VIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQD 120
VIFTG DTKV QNST PPSKRS +E++MDKIIY +F +++ M+FIGS+ FG+ TR+DL+D
Sbjct: 276 VIFTGHDTKVIQNSTDPPSKRSMIEKKMDKIIYLMFFMVITMAFIGSVIFGVTTRDDLKD 335
Query: 121 GKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFI 180
G MKRWYLRPD ++ ++DPKRA VAA+ HFLTA+MLY Y IPISLYVSIEIVK+LQSIFI
Sbjct: 336 GVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLTAVMLYSYFIPISLYVSIEIVKVLQSIFI 395
Query: 181 NQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRG 240
NQD+HMYYEE DKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCS+AGT+YGRG
Sbjct: 396 NQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRG 455
Query: 241 VTEVERAMARRKGSPL-----EEEVTEEQEDKA-----SIKGFNFEDERIMNGSWVNEPH 290
VTEVE AM RRKG PL E ++ E +A ++KGFNF DERIMNG+WV E H
Sbjct: 456 VTEVEMAMGRRKGGPLVFQSDENDIDMEYSKEAITEESTVKGFNFRDERIMNGNWVTETH 515
Query: 291 ADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSIS 350
ADVIQKF RLLA+CHT +PEVDE+ KISYEAESPDEAAFVIAARELGFEF+ RTQT+IS
Sbjct: 516 ADVIQKFFRLLAVCHTVIPEVDEDTEKISYEAESPDEAAFVIAARELGFEFFNRTQTTIS 575
Query: 351 VHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN 410
V ELD V+G +VER Y +LNVLEF+S+RKRMSVIV+ E+G LLLL KGAD+VMFERL++N
Sbjct: 576 VRELDLVSGKRVERLYKVLNVLEFNSTRKRMSVIVQEEDGKLLLLCKGADNVMFERLSKN 635
Query: 411 GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRXXXXXXX 470
GREFEE+T++H+NEYADAGLRTLILAYRELDEKEYK FNE +EAK+SVSADR
Sbjct: 636 GREFEEETRDHVNEYADAGLRTLILAYRELDEKEYKVFNERISEAKSSVSADRESLIEEV 695
Query: 471 XXXXXXXXXXXGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 530
GATAVEDKLQNGVP+CIDKLAQAGIK+WVLTGDKMETAINIGFACSLLR
Sbjct: 696 TEKIEKDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 755
Query: 531 QGMRQVIISSETPESKTXXXXXXXXXXXXXXXXXVLHQLIRGKELLDSSNESLGPLALII 590
Q M+Q+II+ ETPE ++ VL Q+I GK L S + ALII
Sbjct: 756 QDMKQIIINLETPEIQSLEKTGEKDVIAKASKENVLSQIINGKTQLKYSGGNA--FALII 813
Query: 591 DGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGAN 650
DGKSL YAL+DD+K +FLELA+ CASVICCRSSPKQKALVTRLVK+ TTLAIGDGAN
Sbjct: 814 DGKSLAYALDDDIKHIFLELAVSCASVICCRSSPKQKALVTRLVKSGNGKTTLAIGDGAN 873
Query: 651 DVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFY 710
DVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR+LERLLLVHGHWCYRRIS+MICYFFY
Sbjct: 874 DVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISTMICYFFY 933
Query: 711 KNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFP 770
KNI FGFTLF +E Y +FS P YNDWFLSLYNVFF+SLPVIALGVFDQDVSAR+CLKFP
Sbjct: 934 KNITFGFTLFLYETYTTFSSTPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFP 993
Query: 771 LLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTM 830
LLYQEGVQN+LFSW RILGW NG +A IIFF C +++ QAF G+ G EILG TM
Sbjct: 994 LLYQEGVQNVLFSWRRILGWMFNGFYSAVIIFFLCKSSLQSQAFNHDGKTPGREILGGTM 1053
Query: 831 YTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEAC 890
YTC+VWVVN QMAL+++YFT IQH+ IW I WY F+ YG + IST AYKVF+EA
Sbjct: 1054 YTCIVWVVNLQMALAISYFTLIQHIVIWSSIVVWYFFITVYGELPSRISTGAYKVFVEAL 1113
Query: 891 APAPSFWXXXXXXXXXXXXPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQR 950
AP+ S+W PYF YSA+QM FFP++H MIQW R +GQ +DPE+C +VRQR
Sbjct: 1114 APSLSYWLITLFVVVATLMPYFIYSALQMSFFPMYHGMIQWLRYEGQCNDPEYCDIVRQR 1173
Query: 951 SLRPTTVGYTARFEASSRDLK 971
S+RPTTVG+TAR EA R ++
Sbjct: 1174 SIRPTTVGFTARLEAKKRSVR 1194
|
|
| TAIR|locus:2102345 AT3G25610 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3532 (1248.4 bits), Expect = 0., P = 0.
Identities = 672/982 (68%), Positives = 781/982 (79%)
Query: 1 MHEDSNFQNFKAIIRCEDPNANLYTFVGSXXXXXXXXXXXXXXXXXRDSKLRNTDCIYGA 60
+++DS+F++F+ ++RCEDPN NLY FVG+ RDSKLRNT+ +YGA
Sbjct: 215 LNQDSDFKDFRGVVRCEDPNVNLYVFVGTLALEEERFPLSIQQILLRDSKLRNTEYVYGA 274
Query: 61 VIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATRED-LQ 119
V+FTG DTKV QNST PPSKRS++ER MDKIIY +FG++ LMSF+GSI FG+ TRED ++
Sbjct: 275 VVFTGHDTKVIQNSTDPPSKRSRIERTMDKIIYLMFGLVFLMSFVGSIIFGVETREDKVK 334
Query: 120 DGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIF 179
+G+ +RWYL+PDD ++DP+RA +AA+ HF TA MLY Y IPISLYVSIEIVK+LQSIF
Sbjct: 335 NGRTERWYLKPDDADIFFDPERAPMAAIYHFFTATMLYSYFIPISLYVSIEIVKVLQSIF 394
Query: 180 INQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGR 239
IN+D+HMYYEETDKPA+ARTSNLNEELG VDTILSDKTGTLTCNSMEFIKCSIAG +YGR
Sbjct: 395 INRDIHMYYEETDKPAQARTSNLNEELGMVDTILSDKTGTLTCNSMEFIKCSIAGKAYGR 454
Query: 240 GVTEVERAMARRKG-SPLEEEVTEEQEDKAS--IKGFNFEDERIMNGSWVNEPHADVIQK 296
G+TEVERAMA R G SPL E + D++ +KGFNFEDER+MNG+WV +P A V+QK
Sbjct: 455 GITEVERAMAVRSGGSPLVNEDLDVVVDQSGPKVKGFNFEDERVMNGNWVRQPEAAVLQK 514
Query: 297 FLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDP 356
F RLLA+CHTA+PE DEE+G +SYEAESPDEAAFV+AARE GFEF+ RTQ IS ELD
Sbjct: 515 FFRLLAVCHTAIPETDEESGNVSYEAESPDEAAFVVAAREFGFEFFNRTQNGISFRELDL 574
Query: 357 VTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEE 416
V+G KVER Y LLNVLEF+S+RKRMSVIVR ++G LLLLSKGAD+VMFERLA+NGR+FE
Sbjct: 575 VSGEKVERVYRLLNVLEFNSTRKRMSVIVRDDDGKLLLLSKGADNVMFERLAKNGRQFEA 634
Query: 417 QTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRXXXXXXXXXXXXX 476
+T+EH+N+YADAGLRTL+LAYRE+DE EY +FN+ F EAK SVS DR
Sbjct: 635 KTQEHVNQYADAGLRTLVLAYREVDENEYIEFNKSFNEAKASVSEDREALIDEITDKMER 694
Query: 477 XXXXXGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQV 536
GATAVEDKLQNGVPECIDKLAQAGIK+WVLTGDKMETAINIGFA SLLRQ M+Q+
Sbjct: 695 DLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFASSLLRQEMKQI 754
Query: 537 IISSETPESKTXXXXXXXXXXXXXXXXXVLHQLIRGKELLDSSNESLGPLALIIDGKSLT 596
II+ ETP+ K+ V+ QL GK LL +S S ALIIDGKSLT
Sbjct: 755 IINLETPQIKSLEKSGGKDEIELASRESVVMQLQEGKALLAASGASSEAFALIIDGKSLT 814
Query: 597 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 656
YALED++K +FL+LA CASVICCRSSPKQKALVTRLVK+ T TTLAIGDGANDVGMLQ
Sbjct: 815 YALEDEIKKMFLDLATSCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQ 874
Query: 657 EADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFG 716
EADIGVGISGVEGMQAVMSSDIAIAQFR+LERLLLVHGHWCY RI+SMICYFFYKNI FG
Sbjct: 875 EADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYSRIASMICYFFYKNITFG 934
Query: 717 FTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEG 776
T+F +EAY SFSGQP YNDWFLSL+NVFF+SLPVIALGVFDQDVSARFC KFPLLYQEG
Sbjct: 935 VTVFLYEAYTSFSGQPAYNDWFLSLFNVFFSSLPVIALGVFDQDVSARFCYKFPLLYQEG 994
Query: 777 VQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVW 836
VQNILFSW RI+GW NG +A IFF C ++K Q F G+ G EILG TMYTCVVW
Sbjct: 995 VQNILFSWKRIIGWMFNGFISALAIFFLCKESLKHQLFDPDGKTAGREILGGTMYTCVVW 1054
Query: 837 VVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSF 896
VVN QMALS++YFT++QH+ IWG I FWYIFL+ YGAM P ST AY VF+EA APAPS+
Sbjct: 1055 VVNLQMALSISYFTWVQHIVIWGSIAFWYIFLMIYGAMTPSFSTDAYMVFLEALAPAPSY 1114
Query: 897 WXXXXXXXXXXXXPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTT 956
W PYF Y ++QMRFFP +HQMIQW R +G ++DPEF +MVRQRS+RPTT
Sbjct: 1115 WLTTLFVMIFALIPYFVYKSVQMRFFPKYHQMIQWIRYEGHSNDPEFVEMVRQRSIRPTT 1174
Query: 957 VGYTARFEASSRDLKAKLEDSL 978
VGYTAR AS R A+ D +
Sbjct: 1175 VGYTARRAASVRR-SARFHDQI 1195
|
|
| TAIR|locus:2031860 ACA.l "autoinhibited Ca2+/ATPase II" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3464 (1224.4 bits), Expect = 0., P = 0.
Identities = 668/985 (67%), Positives = 769/985 (78%)
Query: 1 MHEDSNFQNFKAIIRCEDPNANLYTFVGSXXXXXXXXXXXXXXXXXRDSKLRNTDCIYGA 60
+HEDS+F+ KA+++CEDPNA+LYTFVG+ RDSKLRNT+ IYG
Sbjct: 213 LHEDSDFKELKAVVKCEDPNADLYTFVGTLHFEEQRLPLSITQLLLRDSKLRNTEYIYGV 272
Query: 61 VIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDL-- 118
V+FTG DTKV QNST PPSKRS++ER+MDKIIY +FG++ LMSFIGSI FGI TRED
Sbjct: 273 VVFTGHDTKVIQNSTDPPSKRSRIERKMDKIIYLMFGVVFLMSFIGSIVFGIETREDRVR 332
Query: 119 QDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSI 178
G+ +RWYLRPD+ ++DP RA +AAV HF TA+MLY Y IPISLYVSIEIVK+LQS+
Sbjct: 333 NGGRTERWYLRPDNADIFFDPDRAPMAAVYHFFTAVMLYSYFIPISLYVSIEIVKVLQSL 392
Query: 179 FINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYG 238
FIN D+ MYYEE DKPA ARTSNLNEELG VDTILSDKTGTLTCNSMEFIKCSIAGT+YG
Sbjct: 393 FINNDILMYYEENDKPAHARTSNLNEELGMVDTILSDKTGTLTCNSMEFIKCSIAGTAYG 452
Query: 239 RGVTEVERAMARRK-GSPLEEEVTEEQEDKAS--IKGFNFEDERIMNGSWVNEPHADVIQ 295
RG+TEVER+MA R GS L + + D++ IKGFNF DER+M G+WV + A V+Q
Sbjct: 453 RGITEVERSMAMRSNGSSLVGDDLDVVVDQSGPKIKGFNFLDERVMKGNWVKQRDAAVLQ 512
Query: 296 KFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELD 355
KF RLLA+CHTA+PE DE G +SYEAESPDEAAFV+AARE GFEF+ RTQ IS ELD
Sbjct: 513 KFFRLLAVCHTAIPETDEATGSVSYEAESPDEAAFVVAAREFGFEFFSRTQNGISFRELD 572
Query: 356 PVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFE 415
+G VER Y LLNVLEF+S+RKRMSVIVR E+G LLLLSKGAD+VMFERLA+NGR+FE
Sbjct: 573 LASGKTVERVYRLLNVLEFNSARKRMSVIVRDEDGRLLLLSKGADNVMFERLAKNGRKFE 632
Query: 416 EQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRXXXXXXXXXXXX 475
E+T+EH+NEYADAGLRTLILAYRE+DE EY +F++ F EAKNSV+ADR
Sbjct: 633 EKTREHVNEYADAGLRTLILAYREVDENEYIEFSKNFNEAKNSVTADRESLIDEITEQME 692
Query: 476 XXXXXXGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQ 535
GATAVEDKLQNGVP+CIDKLAQAGIK+WVLTGDKMETAINIGFACSLLRQ M+Q
Sbjct: 693 RDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQEMKQ 752
Query: 536 VIISSETPESKTXXXXXXXXXXXXXXXXXVLHQLIRGKELL--DSSNESLGPLALIIDGK 593
+II+ ETP K V++Q+ GK LL SS S ALIIDGK
Sbjct: 753 IIINLETPHIKALEKAGEKDAIEHASRESVVNQMEEGKALLTASSSASSHEAFALIIDGK 812
Query: 594 SLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVG 653
SLTYALEDD K FL+LA GCASVICCRSSPKQKALVTRLVK+ T TTLAIGDGANDVG
Sbjct: 813 SLTYALEDDFKKKFLDLATGCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVG 872
Query: 654 MLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNI 713
MLQEADIGVGISGVEGMQAVMSSDIAIAQFR+LERLLLVHGHWCY RISSMICYFFYKNI
Sbjct: 873 MLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYSRISSMICYFFYKNI 932
Query: 714 AFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLY 773
FG T+F +EAY SFS QP YNDWFLSL+NVFF+SLPVIALGVFDQDVSAR+C KFPLLY
Sbjct: 933 TFGVTVFLYEAYTSFSAQPAYNDWFLSLFNVFFSSLPVIALGVFDQDVSARYCYKFPLLY 992
Query: 774 QEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTC 833
QEGVQN+LFSW RI+GW NGV A IFF C ++K Q + G+ G EILG TMYTC
Sbjct: 993 QEGVQNLLFSWKRIIGWMFNGVFTALAIFFLCKESLKHQLYNPNGKTAGREILGGTMYTC 1052
Query: 834 VVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPA 893
VVWVVN QMAL+++YFT++QH+ IWG + FWYIFL+ YGA+ P ST AYKVFIEA APA
Sbjct: 1053 VVWVVNLQMALAISYFTWLQHIVIWGSVAFWYIFLMIYGAITPSFSTDAYKVFIEALAPA 1112
Query: 894 PSFWXXXXXXXXXXXXPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLR 953
PS+W P+F + ++QMRFFP +HQMIQW R +G ++DPEF +MVRQRS+R
Sbjct: 1113 PSYWLTTLFVMFFALIPFFVFKSVQMRFFPGYHQMIQWIRYEGHSNDPEFVEMVRQRSIR 1172
Query: 954 PTTVGYTARFEASSRDLKAKLEDSL 978
PTTVG+TAR AS R + D L
Sbjct: 1173 PTTVGFTARRAASVRR-SGRFHDQL 1196
|
|
| TAIR|locus:2088217 AT3G13900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2070 (733.7 bits), Expect = 6.0e-293, Sum P(2) = 6.0e-293
Identities = 399/718 (55%), Positives = 503/718 (70%)
Query: 263 EQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEA 322
+Q IKGF+FED+R+M G+W+NEP++D I FLR+LA+CHTA+PEVDE+ GK +YEA
Sbjct: 511 DQTQSTGIKGFSFEDQRLMGGNWLNEPNSDDILMFLRILAVCHTAIPEVDEDTGKCTYEA 570
Query: 323 ESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMS 382
ESPDE AF++AA E GFEF +RTQ+S+ + E +G VER Y +LNVL+F+S RKRMS
Sbjct: 571 ESPDEVAFLVAAGEFGFEFTKRTQSSVFISERH--SGQPVEREYKVLNVLDFTSKRKRMS 628
Query: 383 VIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDE 442
VIVR E+G +LLL KGADS++FERL++NG+ + E T +H+N Y +AGLRTL L+YR+LDE
Sbjct: 629 VIVRDEKGQILLLCKGADSIIFERLSKNGKNYLEATSKHLNGYGEAGLRTLALSYRKLDE 688
Query: 443 KEYKQFNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXXGATAVEDKLQNGVPECIDKLA 502
EY +N EF +AK SV ADR GATAVEDKLQ GVP+CIDKLA
Sbjct: 689 TEYSIWNSEFHKAKTSVGADRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDKLA 748
Query: 503 QAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTXXXXXXXXXXXXXXX 562
QAG+K+WVLTGDKMETAINIG+ACSLLRQGM+Q+ I+ E +
Sbjct: 749 QAGLKIWVLTGDKMETAINIGYACSLLRQGMKQIYIALRNEEGSSQDPEAAAREN----- 803
Query: 563 XXVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS 622
+L Q+I +++ + ALIIDGK+LTYALEDD+K FL LA+ CASVICCR
Sbjct: 804 --ILMQIINASQMIKLEKDPHAAFALIIDGKTLTYALEDDIKYQFLALAVDCASVICCRV 861
Query: 623 SPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682
SPKQKALVTRL K T TTLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQ
Sbjct: 862 SPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQ 921
Query: 683 FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLY 742
FRFLERLL+VHGHWCY+RI+ MICYFFYKNI FG TLF+FEA+ FSGQ +YND +L L+
Sbjct: 922 FRFLERLLVVHGHWCYKRIAQMICYFFYKNITFGLTLFYFEAFTGFSGQAIYNDSYLLLF 981
Query: 743 NVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIF 802
NV TSLPVIALGVF+QDVS+ CL+FP LYQ+G +N+ F W RI+GW NGV + +IF
Sbjct: 982 NVILTSLPVIALGVFEQDVSSEVCLQFPALYQQGPKNLFFDWYRIIGWMANGVYASVVIF 1041
Query: 803 FFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGIT 862
I Q+F GG+ ++ +GT M+TC++W VN Q+AL++++FT+IQH+ IWG I
Sbjct: 1042 SLNIGIFHVQSFCSGGQTADMDAMGTAMFTCIIWAVNVQIALTMSHFTWIQHVLIWGSIV 1101
Query: 863 FWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWXXXXXXXXXXXXPYFTYSAIQMRFF 922
WYIFL +G + P +S + + E APAP FW PY Y + Q
Sbjct: 1102 TWYIFLALFGMLPPKVSGNIFHMLSETLAPAPIFWLTSLLVIAATTLPYLAYISFQRSLN 1161
Query: 923 PLHHQMIQ---WFRSDGQTDDPEFCQMVRQRSL--RPTTVGYTARFEASSRDLKAKLE 975
PL H +IQ FR D Q + C R+RS T +G TAR +A R L+ +L+
Sbjct: 1162 PLDHHIIQEIKHFRIDVQDE----CMWTRERSKAREKTKIGVTARVDAKIRQLRGRLQ 1215
|
|
| TAIR|locus:2030180 AT1G72700 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2081 (737.6 bits), Expect = 1.0e-290, Sum P(2) = 1.0e-290
Identities = 399/709 (56%), Positives = 503/709 (70%)
Query: 267 KASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPD 326
+A IKGF FED R+MNG+W+ E + I +F R+LAICHTA+PE++EE GK +YEAESPD
Sbjct: 506 RAPIKGFGFEDNRLMNGNWLRESQPNDILQFFRILAICHTAIPELNEETGKYTYEAESPD 565
Query: 327 EAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVR 386
EA+F+ AARE GFEF++RTQ+S+ + E +G +ER Y +LN+LEF+S RKRM+VIVR
Sbjct: 566 EASFLAAAREFGFEFFKRTQSSVFIRERFSGSGQIIEREYKVLNLLEFTSKRKRMTVIVR 625
Query: 387 SEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYK 446
EEG +LLL KGADS++FERLA+NG+ + T H+ EY +AGLRTL LAYR+LDE EY
Sbjct: 626 DEEGQILLLCKGADSIIFERLAKNGKTYLGPTTRHLTEYGEAGLRTLALAYRKLDEDEYA 685
Query: 447 QFNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXXGATAVEDKLQNGVPECIDKLAQAGI 506
+N EF +AK S+ +DR GATAVEDKLQ GVP+CIDKLAQAG+
Sbjct: 686 AWNSEFLKAKTSIGSDRDELLETGADMIEKELILIGATAVEDKLQKGVPQCIDKLAQAGL 745
Query: 507 KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTXXXXXXXXXXXXXXXXXVL 566
KLWVLTGDKMETAINIGFACSLLRQGMRQ+ I+S E + +L
Sbjct: 746 KLWVLTGDKMETAINIGFACSLLRQGMRQICITSMNSEGGSQDSKRVVKEN-------IL 798
Query: 567 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQ 626
+QL + +++ + ALIIDGK+LTYALEDD+K FL LA+ CASVICCR SPKQ
Sbjct: 799 NQLTKAVQMVKLEKDPHAAFALIIDGKTLTYALEDDMKYQFLALAVDCASVICCRVSPKQ 858
Query: 627 KALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFL 686
KALV RLVK T TTLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQFRFL
Sbjct: 859 KALVVRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFL 918
Query: 687 ERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFF 746
ERLL+VHGHWCY+RI+ MICYFFYKNIAFG TLF+FEA+ FSGQ VYND++L L+NV
Sbjct: 919 ERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSVYNDYYLLLFNVVL 978
Query: 747 TSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCI 806
TSLPVIALGVF+QDVS+ CL+FP LYQ+G +N+ F W+RILGW NGV + +IFF I
Sbjct: 979 TSLPVIALGVFEQDVSSEICLQFPALYQQGTKNLFFDWSRILGWMCNGVYASLVIFFLNI 1038
Query: 807 HAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYI 866
+ QAFR G+ ++ +GTTM+TC++W N Q+AL++++FT+IQH+ IWG I WY+
Sbjct: 1039 GIIYSQAFRDNGQTADMDAVGTTMFTCIIWAANVQIALTMSHFTWIQHVLIWGSIGMWYL 1098
Query: 867 FLLAYGAMDPYISTTAYKVFIEACAPAPSFWXXXXXXXXXXXXPYFTYSAIQMRFFPLHH 926
F+ Y M P S Y++ E APAP +W PY + A Q PL H
Sbjct: 1099 FVAIYSMMPPSYSGNIYRILDEILAPAPIYWMATLLVTVAAVLPYVAHIAFQRFLNPLDH 1158
Query: 927 QMIQWFRSDGQT-DDPEFCQMVRQRSLRPTTVGYTARFEASSRDLKAKL 974
+IQ + G+ +D R ++ T +G+TAR +A R L++KL
Sbjct: 1159 HIIQEIKYYGRDIEDARLWTRERTKAREKTKIGFTARVDAKIRHLRSKL 1207
|
|
| TAIR|locus:2007858 AT1G17500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2755 (974.9 bits), Expect = 8.4e-287, P = 8.4e-287
Identities = 545/990 (55%), Positives = 693/990 (70%)
Query: 6 NFQNFKAIIRCEDPNANLYTFVGSXXXXXXXXXXXXXXXXXRDSKLRNTDCIYGAVIFTG 65
+F++F IIRCEDPN +LYTFVG+ RDSKLRNT +YG V+FTG
Sbjct: 220 SFKDFTGIIRCEDPNPSLYTFVGNLEYERQIFPLDPSQILLRDSKLRNTPYVYGVVVFTG 279
Query: 66 RDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKR 125
DTKV QNST PSKRS++E+ MD IIY L +L+L+S I S F T+ + K
Sbjct: 280 HDTKVMQNSTKSPSKRSRIEKTMDYIIYTLLVLLILISCISSSGFAWETKFHMP----KW 335
Query: 126 WYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLH 185
WYLRP++ +P A +H +TAL+LYGYLIPISLYVSIE+VK+LQ+ FIN+DLH
Sbjct: 336 WYLRPEEPENLTNPSNPVYAGFVHLITALLLYGYLIPISLYVSIEVVKVLQASFINKDLH 395
Query: 186 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 245
MY E+ PA ARTSNLNEELGQVDTILSDKTGTLTCN M+F+KCSIAGTSYG +EVE
Sbjct: 396 MYDSESGVPAHARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVE 455
Query: 246 RAMARRKGSPLEE--EVTE------------EQEDKAS----IKGFNFEDERIMNGSWVN 287
A A++ L+E EV+ E E + IKGF FED R+M+G+W+
Sbjct: 456 VAAAQQMAVDLDEHGEVSSRTSTPRAQARDIEVESSITPRIPIKGFGFEDIRLMDGNWLR 515
Query: 288 EPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQT 347
EPH D I F R+LAICHTA+PE++EE GK +YEAESPDEA+F+ AA E GF F++RTQ+
Sbjct: 516 EPHTDDILLFFRILAICHTAIPELNEETGKYTYEAESPDEASFLTAASEFGFVFFKRTQS 575
Query: 348 SISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERL 407
S+ VHE +G +ER Y +LN+L+F+S RKRMSV+VR EEG +LLL KGADS++FERL
Sbjct: 576 SVYVHERLSHSGQTIEREYKVLNLLDFTSKRKRMSVVVRDEEGQILLLCKGADSIIFERL 635
Query: 408 AENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRXXXX 467
A+NG+ + T +H+NEY +AGLRTL L+YR+LDE+EY +N EF +AK S+ +DR
Sbjct: 636 AKNGKVYLGPTTKHLNEYGEAGLRTLALSYRKLDEEEYSAWNAEFHKAKTSIGSDRDELL 695
Query: 468 XXXXXXXXXXXXXXGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACS 527
GATAVEDKLQ GVP+CIDKLAQAG+KLWVLTGDKMETAINIG++CS
Sbjct: 696 ERISDMIEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGYSCS 755
Query: 528 LLRQGMRQVIISSETPESKTXXXXXXXXXXXXXXXXXVLHQLIRGKELLDSSNESLGPLA 587
LLRQGM+Q+ I+ E + +L+Q+ + +++ + A
Sbjct: 756 LLRQGMKQICITVVNSEGASQDAKAVKDN--------ILNQITKAVQMVKLEKDPHAAFA 807
Query: 588 LIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 647
LIIDGK+LTYALED++K FL LA+ CASVICCR SPKQKALVTRLVK T TLAIGD
Sbjct: 808 LIIDGKTLTYALEDEMKYQFLALAVDCASVICCRVSPKQKALVTRLVKEGTGKITLAIGD 867
Query: 648 GANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICY 707
GANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQFRFLERLL+VHGHWCY+RI+ MICY
Sbjct: 868 GANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICY 927
Query: 708 FFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCL 767
FFYKNIAFG TLF+FEA+ FSGQ VYND++L L+NV TSLPVIALGVF+QDVS+ CL
Sbjct: 928 FFYKNIAFGLTLFYFEAFTGFSGQSVYNDYYLLLFNVVLTSLPVIALGVFEQDVSSEICL 987
Query: 768 KFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILG 827
+FP LYQ+G +N+ F W RILGW NGV ++ +IFF I + +QAFR G+ ++ +G
Sbjct: 988 QFPALYQQGKKNLFFDWYRILGWMGNGVYSSLVIFFLNIGIIYEQAFRVSGQTADMDAVG 1047
Query: 828 TTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFI 887
TTM+TC++W VN Q+AL+V++FT+IQH+ IWG I WY+F+ YG M P +S Y++ +
Sbjct: 1048 TTMFTCIIWAVNVQIALTVSHFTWIQHVLIWGSIGLWYLFVALYGMMPPSLSGNIYRILV 1107
Query: 888 EACAPAPSFWXXXXXXXXXXXXPYFTYSAIQMRFFPLHHQMIQ---WFRSDGQTDDPEFC 944
E APAP +W PYF + + Q PL H +IQ +++ D +D
Sbjct: 1108 EILAPAPIYWIATFLVTVTTVLPYFAHISFQRFLHPLDHHIIQEIKYYKRD--VEDRRMW 1165
Query: 945 QMVRQRSLRPTTVGYTARFEASSRDLKAKL 974
R ++ T +G+TAR +A R L++KL
Sbjct: 1166 TRERTKAREKTKIGFTARVDAKIRHLRSKL 1195
|
|
| TAIR|locus:2020038 AT1G54280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2024 (717.5 bits), Expect = 1.3e-286, Sum P(2) = 1.3e-286
Identities = 393/753 (52%), Positives = 511/753 (67%)
Query: 232 IAGTSYGRGVTEVERAMARRKGSPLEEE--VT----EEQEDKASIKGFNFEDERIMNGSW 285
+A S +G T+ +A + S E E VT ++Q+ +KGF+FED R+MN +W
Sbjct: 474 VANLSMNKGRTQRYAKLASKTSSDFELETVVTASDEKDQKQNTGVKGFSFEDNRLMNENW 533
Query: 286 VNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERT 345
+NEP++D I F R+LA+CHTA+PEVDE+ G +YEAESPDE AF++A+RE GFEF +RT
Sbjct: 534 LNEPNSDDILMFFRILAVCHTAIPEVDEDTGMCTYEAESPDEVAFLVASREFGFEFTKRT 593
Query: 346 QTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFE 405
Q+S+ + E +G V+R Y +LN+L+F+S RKRMS IVR EEG +LLL KGADS++FE
Sbjct: 594 QSSVFIAERFSSSGQPVDREYKILNLLDFTSKRKRMSAIVRDEEGQILLLCKGADSIIFE 653
Query: 406 RLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRXX 465
RL+++G+E+ T +H+N Y +AGLRTL L YR+LDE EY +N EF +AK SV ADR
Sbjct: 654 RLSKSGKEYLGATSKHLNVYGEAGLRTLALGYRKLDETEYAAWNSEFHKAKTSVGADRDE 713
Query: 466 XXXXXXXXXXXXXXXXGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 525
GATAVEDKLQ GVP+CID LAQAG+K+WVLTGDKMETAINIG+A
Sbjct: 714 MLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGYA 773
Query: 526 CSLLRQGMRQVIISSETPESKTXXXXXXXXXXXXXXXXXVLHQLIRGKELLDSSNESLGP 585
CSLLRQGM+Q+ IS E + +L Q+ +++ +
Sbjct: 774 CSLLRQGMKQISISLTNVEESSQNSEAAAKES-------ILMQITNASQMIKIEKDPHAA 826
Query: 586 LALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAI 645
ALIIDGK+LTYAL+DDVK FL LA+ CASVICCR SPKQKALVTRL K T TTLAI
Sbjct: 827 FALIIDGKTLTYALKDDVKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAI 886
Query: 646 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMI 705
GDGANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQFRFLERLL+VHGHWCY+RI+ MI
Sbjct: 887 GDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMI 946
Query: 706 CYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARF 765
CYFFYKNI FG TLF+FE + FSGQ +YND +L L+NV TSLPVI+LGVF+QDV +
Sbjct: 947 CYFFYKNITFGLTLFYFECFTGFSGQSIYNDSYLLLFNVVLTSLPVISLGVFEQDVPSDV 1006
Query: 766 CLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEI 825
CL+FP LYQ+G +N+ F W RILGW NGV + +IF + Q+FR G+ +
Sbjct: 1007 CLQFPALYQQGPKNLFFDWYRILGWMGNGVYASIVIFTLNLGIFHVQSFRSDGQTADMNA 1066
Query: 826 LGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKV 885
+GT M+TC++W VN Q+AL++++FT+IQH+ IWG I WY+FL YG + +S + +
Sbjct: 1067 MGTAMFTCIIWAVNVQIALTMSHFTWIQHVMIWGSIGAWYVFLALYGMLPVKLSGNIFHM 1126
Query: 886 FIEACAPAPSFWXXXXXXXXXXXXPYFTYSAIQMRFFPLHHQMIQ---WFRSDGQTDDPE 942
+E APAP FW PY + + Q PL H +IQ FR D +D
Sbjct: 1127 LVEILAPAPIFWLTSLLVIAATTLPYLFHISYQRSVNPLDHHIIQEIKHFRID--VEDER 1184
Query: 943 FCQMVRQRSLRPTTVGYTARFEASSRDLKAKLE 975
+ + ++ T +G+TAR +A R L+ +L+
Sbjct: 1185 MWKREKSKAREKTKIGFTARVDAKIRQLRGRLQ 1217
|
|
| TAIR|locus:2025961 ALA3 "aminophospholipid ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1964 (696.4 bits), Expect = 5.6e-203, P = 5.6e-203
Identities = 422/953 (44%), Positives = 572/953 (60%)
Query: 10 FKAIIRCEDPNANLYTFVGSXXXXXXXXXXXXXXXXXRDSKLRNTDCIYGAVIFTGRDTK 69
FK I+CE PN +LYTF G+ R LRNT+ I GAV+FTG +TK
Sbjct: 216 FKGEIQCEQPNNSLYTFTGNLVVQKQTLPLSPDQLLLRGCSLRNTEYIVGAVVFTGHETK 275
Query: 70 VFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIAT-REDLQDGKMKRWYL 128
V N+ PSKRS +E+++DK+I +F +LV M IG+I I T RED G L
Sbjct: 276 VMMNAMNAPSKRSTLEKKLDKLIITIFCVLVTMCLIGAIGCSIVTDREDKYLG------L 329
Query: 129 RPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSI-FINQDLHMY 187
D ++ + + F T + L+ +IPISLYVSIE++K +QS FIN+DL+MY
Sbjct: 330 HNSD----WEYRNGLMIGFFTFFTLVTLFSSIIPISLYVSIEMIKFIQSTQFINRDLNMY 385
Query: 188 YEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERA 247
+ ET+ PA ARTSNLNEELGQV+ I SDKTGTLT N MEF KCSI G SYG GVTE+E+
Sbjct: 386 HAETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGVSYGCGVTEIEKG 445
Query: 248 MARRKGSPLEEEVTEEQEDKASI--KGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICH 305
+A+R G +V EEQ +I KGFNF+D R+M G+W NEP+ D+ ++ R LAICH
Sbjct: 446 IAQRHGL----KVQEEQRSTGAIREKGFNFDDPRLMRGAWRNEPNPDLCKELFRCLAICH 501
Query: 306 TALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVER- 364
T LPE DE KI Y+A SPDEAA V AA+ GF FY RT T + V E K++
Sbjct: 502 TVLPEGDESPEKIVYQAASPDEAALVTAAKNFGFFFYRRTPTMVYVRESHVEKMGKIQDV 561
Query: 365 SYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINE 424
+Y +LNVLEF+S+RKR SV+ R +G L+L KGAD+V+FERLA + + T+EH+
Sbjct: 562 AYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKGADNVIFERLANGMDDVRKVTREHLEH 621
Query: 425 YADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXXGAT 484
+ +GLRTL LAY++L+ + Y +NE+F +AK+++ DR G+T
Sbjct: 622 FGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSALR-DREKKLDEVAELIEKDLILIGST 680
Query: 485 AVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE 544
A+EDKLQ GVP CI+ L++AGIK+WVLTGDKMETAINI +AC+L+ M+Q +ISSET
Sbjct: 681 AIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFVISSETDA 740
Query: 545 SKTXXXXXXXXXXXXXXXXXVLHQLIRGKELLDSSNESL-GP-LALIIDGKSLTYALEDD 602
+ V +L + E S ++ GP L+L+IDGK L YAL+
Sbjct: 741 IREAEERGDQVEIARVIKEEVKRELKKSLEEAQHSLHTVAGPKLSLVIDGKCLMYALDPS 800
Query: 603 VKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGV 662
++ + L L++ C SV+CCR SP QKA VT LV+ TL+IGDGANDV M+Q A +G+
Sbjct: 801 LRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQKITLSIGDGANDVSMIQAAHVGI 860
Query: 663 GISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFF 722
GISG+EGMQAVM+SD AIAQFRFL LLLVHG W Y RI ++ YFFYKN+ F T F+F
Sbjct: 861 GISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVMYFFYKNLTFTLTQFWF 920
Query: 723 EAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILF 782
FSGQ Y+DWF SL+NV FT+LPVI LG+F++DVSA ++P LY+EG++N F
Sbjct: 921 TFRTGFSGQRFYDDWFQSLFNVVFTALPVIVLGLFEKDVSASLSKRYPELYREGIRNSFF 980
Query: 783 SWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQM 842
W + WA + V + + + F + A G+V GL + T ++TC+V VN ++
Sbjct: 981 KWRVVAVWATSAVYQSLVCYLF-VTTSSFGAVNSSGKVFGLWDVSTMVFTCLVIAVNVRI 1039
Query: 843 ALSVTYFTYIQHLFIWGGITFWYIFLLAY-GAMDPYISTTAYKVFIEACAPAPSFWXXXX 901
L T ++ + G I W +F Y G M P+ I F+
Sbjct: 1040 LLMSNSITRWHYITVGGSILAWLVFAFVYCGIMTPHDRNENVYFVIYVLMSTFYFYFTLL 1099
Query: 902 XXXXXXXXPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRP 954
F + ++ FFP +Q++Q ++D + Q+ + L P
Sbjct: 1100 LVPIVSLLGDFIFQGVERWFFPYDYQIVQEIHRH-ESDASKADQLEVENELTP 1151
|
|
| DICTYBASE|DDB_G0269380 DDB_G0269380 "P-type ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 973 (347.6 bits), Expect = 2.8e-187, Sum P(2) = 2.8e-187
Identities = 222/549 (40%), Positives = 325/549 (59%)
Query: 1 MHEDSNFQNFKAIIRCEDPNANLYTFVGSXXXXXXXXXX--XXXXXXXRDSKLRNTDCIY 58
+ + + +F+ I CE PN +Y + G+ R LRNT+ IY
Sbjct: 336 LRSEEDLAHFRGNIECEHPNNVIYVYNGAIQMTDDSQKHPLNNTQTLLRGCVLRNTEWIY 395
Query: 59 GAVIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDL 118
GAV++TG DTK+ QNST PSKRS +E+ +++ + LF I+ ++ +G I I T ++
Sbjct: 396 GAVVYTGEDTKLMQNSTDAPSKRSTLEKLVNRALINLFIIMFVVCVVGMIVSVILTSTNI 455
Query: 119 QDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSI 178
K+WYL D ++ K AVL+ + ++ + +IPISLYVS+E+VK+ Q++
Sbjct: 456 D----KQWYL---D----FEQKDVR-KAVLNLFSFMIAFAVMIPISLYVSLELVKVAQAV 503
Query: 179 FINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYG 238
++ D+ MY ET+ PAR RTSNL+EELGQ++ I SDKTGTLT N M+F+KCS+ YG
Sbjct: 504 YVGWDVKMYDPETNTPARTRTSNLSEELGQIEYIFSDKTGTLTRNQMDFLKCSVGKMVYG 563
Query: 239 RGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMN--GSWVNEPHADVIQK 296
E + + + G +E V + + F F+D RI+ N + +I +
Sbjct: 564 NVEREDDASSNKPYGIAMEGIVGADPK-------FGFKDRRIITHLDEDKNSEQSFLINE 616
Query: 297 FLRLLAICHTALPE-VDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELD 355
FL LLA+CH+ +P+ ++++ +I YEA SPDEAA V AA+ LG+ FY R T V+
Sbjct: 617 FLTLLAVCHSVVPDRPNKDDSEIIYEASSPDEAALVSAAKNLGYAFYNRDPTGCLVN--- 673
Query: 356 PVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFE 415
+ G K+ER + +LNVLEF+S RKRMSVI R+ +G ++L KGAD+ + L ++ E
Sbjct: 674 -IRG-KIER-FEVLNVLEFNSDRKRMSVICRNPQGRIILYCKGADTTVLPLLRKDQEELY 730
Query: 416 EQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRXXXXXXXXXXXX 475
T E + ++A GLRTL LAY L+E++Y+Q+NE + EA S+ DR
Sbjct: 731 SITLEFLQDFAADGLRTLCLAYTYLEEEDYQQWNELYKEAAISIQ-DRDMKVDKVSELIE 789
Query: 476 XXXXXXGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQ 535
G+TA+EDKLQ GVP+ I L +A IK+WVLTGDK ETAINIGF+C LL MR
Sbjct: 790 RNLSLIGSTAIEDKLQEGVPQAIANLIKANIKIWVLTGDKQETAINIGFSCHLLTSDMRI 849
Query: 536 VIISSETPE 544
+I++ E
Sbjct: 850 IILNGSNQE 858
|
|
| UNIPROTKB|F1LS08 Atp8b4 "Protein Atp8b4" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1611 (572.2 bits), Expect = 1.4e-165, P = 1.4e-165
Identities = 375/940 (39%), Positives = 530/940 (56%)
Query: 5 SNFQNFKAIIRCEDPNANLYTFVGSXXXXXXXXXXXXXXXXXRDSKLRNTDCIYGAVIFT 64
S+ F I+ CE PN L F G R LRNT +G V+F
Sbjct: 165 SSLAKFDGIVICEAPNNKLDRFSGVLSWKDSKHTLSNQKIILRGCVLRNTSWCFGMVLFA 224
Query: 65 GRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMK 124
G DTK+ QNS KR+ ++R M+ ++ ++FG LV + I ++ G + E + G
Sbjct: 225 GPDTKLMQNSGKTKFKRTSIDRLMNTLVLWIFGFLVCLGIILAV--GNSIWES-EVGNQF 281
Query: 125 RWYLRPDDTTAYY--DPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQ 182
R T+ ++ K + + L F + +++ L+PISLYVS+E++++ S FIN
Sbjct: 282 R-------TSLFWREGEKSSLFSGFLTFWSYVIILNTLVPISLYVSVEVIRLGHSYFINW 334
Query: 183 DLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVT 242
D MYY PA ART+ LNEELGQ++ I SDKTGTLT N M F KCSI G Y G
Sbjct: 335 DRKMYYAAKAMPAEARTTTLNEELGQIEYIFSDKTGTLTQNIMTFKKCSINGRVYA-G-- 391
Query: 243 EVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLA 302
EV + ++K ++E + S + +F D +M + +P + +FLRLLA
Sbjct: 392 EVLDDLDQKKEITKKKEAVDFSGKSKSERTLHFFDHSLMESIELGDPK---VHEFLRLLA 448
Query: 303 ICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKV 362
+CHT + E D G++ Y+ +SPDE A V AAR GF F RT +I++ EL GT V
Sbjct: 449 LCHTVMSEEDSA-GQLVYQVQSPDEGALVTAARNFGFIFKSRTPETITIEEL----GTPV 503
Query: 363 ERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHI 422
+Y LL L+F++ RKRMSVIVR+ EG + L SKGAD+++FE+L + + T +H+
Sbjct: 504 --TYQLLAFLDFNNIRKRMSVIVRNPEGQIKLYSKGADTILFEKLHPSNEDLLSLTSDHL 561
Query: 423 NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXXG 482
+E+A GLRTL +AYRELD+K +K + + +A NS A+R G
Sbjct: 562 SEFAGEGLRTLAIAYRELDDKYFKMWQKMLEDA-NSAIAERDERISGLYEEIERDLMLLG 620
Query: 483 ATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQV-IISSE 541
ATAVEDKLQ GV E I L+ A IK+W+LTGDK ETAINIG+AC++L M V +I+
Sbjct: 621 ATAVEDKLQEGVIETITSLSLANIKIWILTGDKQETAINIGYACNVLTDAMDAVFVITGN 680
Query: 542 TP-ESKTXXXXXXXXXXXXXXXXXVLHQLIRGKELL--DS-SNESL-GPLALIIDGKSLT 596
T E + H + K+ L DS + E++ G AL+I+G SL
Sbjct: 681 TAVEVREELRKAKENLLGQNTSFSNGHAVYENKQRLELDSGAGETVTGEYALVINGHSLA 740
Query: 597 YALEDDV-KDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGML 655
+ALE DV KDL LELA C +V+CCR +P QKA V LVK ++ TLAIGDGANDV M+
Sbjct: 741 HALESDVEKDL-LELACVCKTVVCCRVTPLQKAQVVELVKKHRNAVTLAIGDGANDVSMI 799
Query: 656 QEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAF 715
+ A IG+GISG EG+QAV++SD A+AQFR+L+RLLLVHG W Y R+ +CYFFYKN AF
Sbjct: 800 KSAHIGIGISGQEGLQAVLASDYALAQFRYLQRLLLVHGRWSYYRMCKFLCYFFYKNFAF 859
Query: 716 GFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQE 775
F+F Y FS Q VY+ WF++L+N+ +TSLPV+A+GVFDQDVS + + P LY+
Sbjct: 860 TLVHFWFAFYCGFSAQTVYDQWFITLFNIVYTSLPVLAMGVFDQDVSEQNSMDCPQLYEP 919
Query: 776 GVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVV 835
G N+LF+ R +G+ + I+FF A A G + + T+ T +V
Sbjct: 920 GQLNLLFNKRRFFICVAHGIYTSLILFFIPYGAFYNVAAEDGQHIADYQSFAVTVATSLV 979
Query: 836 WVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPS 895
VV+ Q+AL +Y+T + H+FIWG + ++ LLA + + F+ + S
Sbjct: 980 IVVSVQIALDTSYWTVVNHVFIWGSVATYFSILLAMHSDGVFGIFPRQFPFVGNARRSLS 1039
Query: 896 ---FWXXXXXXXXXXXXPYFTYSAIQMRFFP-LHHQMIQW 931
W P + ++M +P L Q+ +W
Sbjct: 1040 QKFVWLVVLLTAVTSVMPVVVFRFLKMHLYPSLSDQIRRW 1079
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SX33 | ALA9_ARATH | 3, ., 6, ., 3, ., 1 | 0.7258 | 0.9867 | 0.8041 | yes | no |
| Q9LI83 | ALA10_ARATH | 3, ., 6, ., 3, ., 1 | 0.7169 | 0.9989 | 0.8128 | no | no |
| P57792 | ALA12_ARATH | 3, ., 6, ., 3, ., 1 | 0.7099 | 0.9775 | 0.8074 | no | no |
| Q9SAF5 | ALA11_ARATH | 3, ., 6, ., 3, ., 1 | 0.7138 | 0.9897 | 0.8046 | no | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 978 | |||
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.0 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-116 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 3e-29 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 9e-28 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 9e-25 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 8e-18 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 2e-16 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 3e-12 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 4e-11 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-10 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 3e-07 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 5e-07 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 5e-07 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 5e-04 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 0.002 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 0.004 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 1199 bits (3104), Expect = 0.0
Identities = 458/924 (49%), Positives = 614/924 (66%), Gaps = 36/924 (3%)
Query: 9 NFKAIIRCEDPNANLYTFVGSLELEE-QQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRD 67
NF I CE PNA+LY+F G++ + +QYPL+P +LLR LRNTD + G V++TG D
Sbjct: 167 NFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHD 226
Query: 68 TKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWY 127
TK+ +N+T PSKRS++E+ ++ +I LF +L ++ I S+ GI +D WY
Sbjct: 227 TKLMRNATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKD----LWY 282
Query: 128 LRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMY 187
+R D + + AA FLT L+L+ LIPISLYVS+E+VK +Q+ FIN DL MY
Sbjct: 283 IRLDVS-----ERNAAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMY 337
Query: 188 YEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERA 247
+E+TD PA RTSNLNEELGQV+ I SDKTGTLT N MEF KCSIAG SYG G TE++
Sbjct: 338 HEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDG 397
Query: 248 MARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTA 307
+ R GS +E E + E KGF F D R+++ N+P+A I +F LA+CHT
Sbjct: 398 IRERLGSYVENENSMLVE----SKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTV 453
Query: 308 LPEV-DEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSY 366
+PE D+ +I+Y+A SPDEAA V AAR++GF F+ERT SIS+ + G + Y
Sbjct: 454 VPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLI--EMHG--ETKEY 509
Query: 367 SLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYA 426
+LNVLEF+S RKRMSVIVR+ +G + LL KGAD+V+F+RL+ G + E+TKEH+ YA
Sbjct: 510 EILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYA 569
Query: 427 DAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAV 486
GLRTL +AYREL E+EY+++NEE+ EA ++ DREE + +AE IEK+LILLGATA+
Sbjct: 570 SEGLRTLCIAYRELSEEEYEEWNEEYNEASTAL-TDREEKLDVVAESIEKDLILLGATAI 628
Query: 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESK 546
EDKLQ GVPE I+ L QAGIK+WVLTGDK+ETAINIG++C LL + M Q++I+S++ ++
Sbjct: 629 EDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSDSLDAT 688
Query: 547 TLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDL 606
++ K L+ + L DS N +AL+IDGKSL YAL+++++
Sbjct: 689 RSVEAAIKFG----LEGTSEEFN----NLGDSGN-----VALVIDGKSLGYALDEELEKE 735
Query: 607 FLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISG 666
FL+LA+ C +VICCR SP QKA V RLVK T TTLAIGDGANDV M+QEAD+GVGISG
Sbjct: 736 FLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISG 795
Query: 667 VEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYA 726
EGMQAVM+SD AI QFRFL +LLLVHG W Y+RIS MI YFFYKN+ F F++ Y
Sbjct: 796 KEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYN 855
Query: 727 SFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTR 786
FSGQ +Y W++ LYNVFFT+LPVI+LGVFDQDVSA L++P LY+EG + FS
Sbjct: 856 GFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKT 915
Query: 787 ILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSV 846
GW L+G+ + +IFFF + A F G V +G ++T +V +VN ++AL +
Sbjct: 916 FWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGSVDDFSSVGVIVFTALVVIVNLKIALEI 975
Query: 847 TYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMS 906
+ +I + IWG I W IF++ Y + A+ FWL+ L++++
Sbjct: 976 NRWNWISLITIWGSILVWLIFVIVYS---SIFPSPAFYKAAPRVMGTFGFWLVLLVIVLI 1032
Query: 907 SLLPYFTYSAIQMRFFPLHHQMIQ 930
SLLP FTY AIQ F P + ++Q
Sbjct: 1033 SLLPRFTYKAIQRLFRPPDYDIVQ 1056
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 608 bits (1570), Expect = 0.0
Identities = 341/935 (36%), Positives = 513/935 (54%), Gaps = 58/935 (6%)
Query: 8 QNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRD 67
+ +I+CE PN N+Y F ++E++ ++ L P ++LR +L+NT G ++ GR+
Sbjct: 249 EKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRE 308
Query: 68 TKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWY 127
TK N++G PSKRS++E RM+ I L L+ + I S+ + R + +Y
Sbjct: 309 TKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFY 368
Query: 128 LRPD------DTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFIN 181
R D YY FL +++++ +IPISLY+S+E+V++ Q+ F+
Sbjct: 369 RRKDFSEGGPKNYNYYG---WGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMI 425
Query: 182 QDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGV 241
+D MY E ++ + R N+NE+LGQ+ + SDKTGTLT N MEF SI G Y G
Sbjct: 426 RDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGR 485
Query: 242 TEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLL 301
T + A ++ ++ K +K + + + E A + F L
Sbjct: 486 TPTQNDHAGYSVE-VDGKILRP---KMKVK-VDPQLLELSKSGKDTE-EAKHVHDFFLAL 539
Query: 302 AICHTALPEVDEENGK-----ISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDP 356
A C+T +P V ++ + Y+ ESPDE A V AA GF ERT S H +
Sbjct: 540 AACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERT----SGHIVID 595
Query: 357 VTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN-GREFE 415
+ G + + +++L + EF S RKRMSVI+ + T+ + KGAD+ MF + +
Sbjct: 596 IHGER--QRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVI 653
Query: 416 EQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIE 475
T+ H++ Y+ GLRTL++ REL++ E++Q++ F EA ++ R L ++A +E
Sbjct: 654 RATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSF-EAASTALIGRAALLRKVASNVE 712
Query: 476 KNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQ 535
NL +LGA+A+EDKLQ GVPE I+ L AGIK+WVLTGDK ETAI+IG++ LL M Q
Sbjct: 713 NNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQ 772
Query: 536 VIISSETPES--KTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGK 593
+II+S + ES K+LE A + K + + + + SS + P+ALIIDG
Sbjct: 773 IIINSNSKESCRKSLE-----DALVMSKKLTTVSGISQNTGG--SSAAASDPVALIIDGT 825
Query: 594 SLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVG 653
SL Y L+ ++++ +LA C+ V+CCR +P QKA + LVK +TS TLAIGDGANDV
Sbjct: 826 SLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVS 885
Query: 654 MLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNI 713
M+Q AD+GVGISG EG QAVM+SD A+ QFRFL LLLVHGHW Y+R+ MI Y FY+N
Sbjct: 886 MIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNA 945
Query: 714 AFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLY 773
F LF++ + F+ N+W LY+V +T+LP I +G+ D+D+S R LK+P LY
Sbjct: 946 VFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLY 1005
Query: 774 -----QEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGT 828
QE + LF T I + + +A++FF + F I +G
Sbjct: 1006 GAGQRQEAYNSKLFWLTMI-----DTLWQSAVVFFVPL-------FAYWASTIDGSSIGD 1053
Query: 829 TMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIE 888
VV +VN +A+ + + +I H IWG I +I ++ +D + Y
Sbjct: 1054 LWTLAVVILVNLHLAMDIIRWNWITHAAIWGSIVATFICVI---VIDAIPTLPGYWAIFH 1110
Query: 889 ACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFP 923
A SFWL L +++++LLP F + F P
Sbjct: 1111 I-AKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTP 1144
|
Length = 1178 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 378 bits (972), Expect = e-116
Identities = 212/915 (23%), Positives = 323/915 (35%), Gaps = 219/915 (23%)
Query: 26 FVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVE 85
L + L +L + + + G V+ TG +T+ + + P+K+
Sbjct: 201 QALPLTKSDAPLGLDRDNMLFSGTTVVSGRAK-GIVVATGFETEFGKIARLLPTKKEVKT 259
Query: 86 RRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVA 145
K+ +LVL +G++ F + + +
Sbjct: 260 PLQRKLNKLGKFLLVLALVLGALVFVVGL-----------FRGGNGLLES---------- 298
Query: 146 AVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEE 205
FLTAL L +P L + I L + + +D + R+ N E
Sbjct: 299 ----FLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIV----------RSLNAIET 344
Query: 206 LGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQE 265
LG VD I SDKTGTLT N M K I G +
Sbjct: 345 LGSVDVICSDKTGTLTQNKMTVKKIYINGGG--------------------------KDI 378
Query: 266 DKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESP 325
D +K FL A+C++ PE + Y+A P
Sbjct: 379 DDKDLKDSPALLR------------------FLLAAALCNSVTPEKNGW-----YQAGDP 415
Query: 326 DEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIV 385
E A V A +LGF +E Y +L + F S RKRMSVIV
Sbjct: 416 TEGALVEFAEKLGFSLDLS----------------GLEVEYPILAEIPFDSERKRMSVIV 459
Query: 386 RSEEGTLLLLSKGADSVMFERLAENGREFE------EQTKEHINEYADAGLRTLILAYRE 439
+++EG +L KGA V+ ER G +E + E A GLR L +AY++
Sbjct: 460 KTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKK 519
Query: 440 LDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECID 499
LD E ++ ++IE +L+ LG T +ED + V E I+
Sbjct: 520 LDRAE----------------------KDDEVDEIESDLVFLGLTGIEDPPREDVKEAIE 557
Query: 500 KLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAA 559
+L +AGIK+W++TGD +ETAI I C + +
Sbjct: 558 ELREAGIKVWMITGDHVETAIAIAKECGIEAEAE-------------------------- 591
Query: 560 ALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVIC 619
AL+IDG L ++++ +L EL++
Sbjct: 592 --------------------------SALVIDGAELDALSDEELAELVEELSV------F 619
Query: 620 CRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD-- 677
R SP+QKA + ++ K+ GDG ND L+ AD+G+ + G EG A +
Sbjct: 620 ARVSPEQKARIVEALQ-KSGHVVAMTGDGVNDAPALKAADVGIAMGG-EGTDAAKEAADI 677
Query: 678 IAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDW 737
+ + L +V G Y I I Y KN+ TL
Sbjct: 678 VLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLI--YSLFNLFFLPLTPL 735
Query: 738 FLSLYNVFFTSLPVIALGVFD--QDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGV 795
L N+ SLP +ALGV D DV +K P G + LF+ + L
Sbjct: 736 QLLWINLLTDSLPALALGVEDPESDV-----MKRP---PRGPEEGLFNRKIFWRFILIIG 787
Query: 796 ANAAIIFFFC-IHAMKQQAFRKGGEVIGLEILGTTMYTCVVW--VVNCQMALSVTYFTYI 852
+AI+F + + G + +L TT +T +V ++ S
Sbjct: 788 LLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLS 847
Query: 853 QHLF----IWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSF-WLITLLVLMSS 907
LF +W + I L ++ K+F P F WLI + V +
Sbjct: 848 SLLFSNKYLWLALLVIIILQLLI----IFLPPLNLKIFQ--PTPLSLFEWLIAIAV--AL 899
Query: 908 LLPYFTYSAIQMRFF 922
LL Y S +
Sbjct: 900 LLLYIVVSELYKLKS 914
|
Length = 917 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 125 bits (317), Expect = 3e-29
Identities = 108/470 (22%), Positives = 176/470 (37%), Gaps = 91/470 (19%)
Query: 207 GQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQED 266
G++D DKTGTLT + ++ RGV + K + E +
Sbjct: 446 GKIDVCCFDKTGTLTEDGLDL-----------RGVQGLSGNQEFLK---IVTEDSSL--- 488
Query: 267 KASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPD 326
+ LA CH +L ++ GK+ +
Sbjct: 489 --------------------------KPSITHKALATCH-SLTKL---EGKLVGDPLDKK 518
Query: 327 EAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVR 386
E E E T V DP + S++ +FSS+ +RMSVIV
Sbjct: 519 MFEATGWTLEEDDESAEPTSILAVVRTDDP------PQELSIIRRFQFSSALQRMSVIVS 572
Query: 387 -SEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEY 445
++E + KGA + + +E + Y G R L LAY+EL +
Sbjct: 573 TNDERSPDAFVKGAPETIQSLC--SPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTL 630
Query: 446 KQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAG 505
++ + R+ + E NL LG E+ L+ E I +L +A
Sbjct: 631 QKAQD----------LSRDAV--------ESNLTFLGFIVFENPLKPDTKEVIKELKRAS 672
Query: 506 IKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPES------KTLEKSEDKSAAAA 559
I+ ++TGD TA+++ C ++ ++ +E PES K A+
Sbjct: 673 IRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFAST- 731
Query: 560 ALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVIC 619
V G++ ++ S LA + GK+ L+ +L L L +
Sbjct: 732 ----QVEIPYPLGQDSVEDLLASRYHLA--MSGKAF-AVLQAHSPELLLRLLSHTT--VF 782
Query: 620 CRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEG 669
R +P QK + L++ K T GDGAND G L++AD+G+ +S E
Sbjct: 783 ARMAPDQKETLVELLQ-KLDYTVGMCGDGANDCGALKQADVGISLSEAEA 831
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 118 bits (299), Expect = 9e-28
Identities = 56/216 (25%), Positives = 81/216 (37%), Gaps = 61/216 (28%)
Query: 313 EENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVL 372
+Y + P E A + +A +G + Y +L+V
Sbjct: 274 LVACDNNYLSGDPMEKALLKSAELVGKADKGNKE-------------------YKILDVF 314
Query: 373 EFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRT 432
FSS KRMSVIV + +G+ LL KGA + ER +E E A GLR
Sbjct: 315 PFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERC--------NNYEEKYLELARQGLRV 366
Query: 433 LILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQN 492
L A +EL++ +L LG ED L+
Sbjct: 367 LAFASKELED----------------------------------DLEFLGLITFEDPLRP 392
Query: 493 GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528
E I++L AGIK+ ++TGD + TA I +
Sbjct: 393 DAKETIEELKAAGIKVVMITGDNVLTAKAIAKELGI 428
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 9e-25
Identities = 51/270 (18%), Positives = 89/270 (32%), Gaps = 59/270 (21%)
Query: 11 KAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV 70
I + A Y F G+L + + + + T V+ TG +T+
Sbjct: 101 SGTITGDLVFAGTYVFGGTLIVV------------VTPTGILTTVGRIAVVVKTGFETR- 147
Query: 71 FQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRP 130
+ R++ I+ LF +L+ ++ +F + +
Sbjct: 148 --------TPLQSKRDRLENFIFILFLLLLALAVFLYLFIRGWD-----PNSIFKA---- 190
Query: 131 DDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEE 190
L AL++ ++P +L ++ + D +
Sbjct: 191 -------------------LLRALIVLVIVVPPALPAAVTVALA------VGDARLA--- 222
Query: 191 TDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMAR 250
K R N EELG+VD + SDKTGTLT N M I G + V
Sbjct: 223 -KKGILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDNSSSLVACDNNY 281
Query: 251 RKGSPLEEEVTEEQEDKASIKGFNFEDERI 280
G P+E+ + + E N E + +
Sbjct: 282 LSGDPMEKALLKSAELVGKADKGNKEYKIL 311
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 88.7 bits (220), Expect = 8e-18
Identities = 125/527 (23%), Positives = 189/527 (35%), Gaps = 123/527 (23%)
Query: 204 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEE 263
E LG I SDKTGTLT N M K S + E
Sbjct: 284 ETLGCTTVICSDKTGTLTTNQMSVCKVVALDPS--------------------SSSLNEF 323
Query: 264 QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 323
+ + E I + V +++ + A+C+ + +D K YE
Sbjct: 324 CVTGTT---YAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDS--SLDFNERKGVYEKV 378
Query: 324 S-PDEAAFVIAARELGFEFYERTQTSISVHELD--PVTGTKVERSYSLLNVLEFSSSRKR 380
EAA + ++G + +S L V K ++ L LEFS RK
Sbjct: 379 GEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKK----LATLEFSRDRKS 434
Query: 381 MSVIVRSEEGTLLLLSKGADSVMFER----LAENGR------EFEEQTKEHINEYADA-G 429
MSV+ + G L KGA + ER L +GR + + I E
Sbjct: 435 MSVLCKPSTGNKLF-VKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKA 493
Query: 430 LRTLILAYRE-LDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVED 488
LR L LA+++ D +E + A A IE +L +G + D
Sbjct: 494 LRCLALAFKDIPDPREED---------------LLSDPANFEA--IESDLTFIGVVGMLD 536
Query: 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTL 548
+ V + I+K AGI++ ++TGD ETA I C R++ I S
Sbjct: 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAI---C-------RRIGIFSPD------ 580
Query: 549 EKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFL 608
E KS G+E + +GP
Sbjct: 581 EDVTFKS--------------FTGREF-----DEMGPAK--------------------- 600
Query: 609 ELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGI-SGV 667
+ A ++V+ R P K+ + L++ + + GDG ND L++ADIG+ + SG
Sbjct: 601 QRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMT-GDGVNDAPALKKADIGIAMGSGT 659
Query: 668 EGMQAVMSSDIAIAQFRFLERLLLVH-GHWCYRRISSMICYFFYKNI 713
E A +SD+ +A F + V G Y + I Y NI
Sbjct: 660 E--VAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNI 704
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 84.1 bits (208), Expect = 2e-16
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 37/201 (18%)
Query: 362 VERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVM----FERLAENG--REFE 415
V ++ + F+S RK MSV+V+ G KGA ++ +RL NG
Sbjct: 468 VRAEEKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPIS 527
Query: 416 EQ----TKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIA 471
+ + I A LRT+ LAYR+ +E R++
Sbjct: 528 DDDKDRCADVIEPLASDALRTICLAYRDFAPEE----------------FPRKDYPN--- 568
Query: 472 EKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQ 531
K L L+G ++D L+ GV E + + +AGI + ++TGD ++TA I C +L
Sbjct: 569 ----KGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF 624
Query: 532 GMRQVIISSETPESKTLEKSE 552
G ++ E E ++L E
Sbjct: 625 G----GLAMEGKEFRSLVYEE 641
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 3e-12
Identities = 96/481 (19%), Positives = 162/481 (33%), Gaps = 177/481 (36%)
Query: 204 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEE 263
E LG V+ I SDKTGTLT N M K +
Sbjct: 319 ETLGSVNVICSDKTGTLTKNHMTVTKIWTSDG---------------------------- 350
Query: 264 QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 323
+ N E I++G ++ + + + L +C+ N K EA+
Sbjct: 351 LHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCN---------NAKFRNEAD 401
Query: 324 S----PDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRK 379
+ P + A + + G + + +T I V E+ FSS RK
Sbjct: 402 TLLGNPTDVALIELLMKFGLD--DLRETYIRVAEV------------------PFSSERK 441
Query: 380 RMSV-IVRSEEGTLLLLSKGADSVMFERLAE--------NGR--EFEEQTKEHINE---- 424
M+V V ++ + + KGA +E++ + +G+ +Q ++ I E
Sbjct: 442 WMAVKCVHRQDRSEMCFMKGA----YEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAE 497
Query: 425 YADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKN-LILLGA 483
A AGLR + A EK L LG
Sbjct: 498 MASAGLRVIAFAS-----------------------------------GPEKGQLTFLGL 522
Query: 484 TAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETP 543
+ D + GV E + L G+++ ++TGD ETA++I R++ + S+T
Sbjct: 523 VGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIA----------RRLGMPSKTS 572
Query: 544 ESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDV 603
+S + G++L ++ L +
Sbjct: 573 QSVS------------------------GEKLDAMDDQQL-----------------SQI 591
Query: 604 KDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVG 663
+ R+SP+ K + + ++ K GDG ND L+ ADIGV
Sbjct: 592 VP---------KVAVFARASPEHKMKIVKALQ-KRGDVVAMTGDGVNDAPALKLADIGVA 641
Query: 664 I 664
+
Sbjct: 642 M 642
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 4e-11
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 22/107 (20%)
Query: 302 AICHTALPEVDEENGKISYEAE-SPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGT 360
A+C+ A + E K E P E+A ++ A +LG I V EL
Sbjct: 1 ALCNDA--KFGENEEKNGGEIIGDPTESALLVFAEKLG----------IDVEEL------ 42
Query: 361 KVERSYSLLNVLEFSSSRKRMSVIVRSE-EGTLLLLSKGADSVMFER 406
Y + + F+S RKRMS + + E + L KGA + ER
Sbjct: 43 --RARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAPERILER 87
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 65.8 bits (160), Expect = 1e-10
Identities = 131/596 (21%), Positives = 210/596 (35%), Gaps = 127/596 (21%)
Query: 204 EELGQVDTILSDKTGTLTCNSM--------EFIKCSIAGTSYGRGVTEVERAMARRKGSP 255
E LG V+ I SDKTGT+T M F SI + E + R SP
Sbjct: 354 EALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRF-SP 412
Query: 256 LEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEEN 315
E E D+ +K F + + + D+ K L A+ + A D+
Sbjct: 413 YEYSHNEAA-DQDILKEFK---DELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDAT 468
Query: 316 GKISYEAESPDEAAFVIAARELGFEFY------------ERTQTSISVHELDPVTGTKVE 363
+ P E A + A++ E Q+S+S H P +
Sbjct: 469 DCWKAHGD-PTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSA---- 523
Query: 364 RSYSLLNVLEFSSSRKRMSVIVRSEEG-TLLLLSKGADSVMFERLAE-NGREFEEQT--- 418
+ + F S KRM+ I G T + +KGA + E + NG++ + +
Sbjct: 524 -QFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLE 582
Query: 419 -------KEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIA 471
++ A GLR L A + D+ + N E L A
Sbjct: 583 DCDRELIIANMESLAAEGLRVLAFASKSFDKAD-----------NNDDQLKNETLNRATA 631
Query: 472 EKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQ 531
E +L LG + D +N ++K QAGI + +LTGD ETA I ++
Sbjct: 632 ES---DLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPP 688
Query: 532 GM---RQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLAL 588
R I+ S ++ G + S+E +
Sbjct: 689 NFIHDRDEIMDS---------------------------MVMTGSQFDALSDEEV----- 716
Query: 589 IIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 648
DD+K L L +A R +P+ K + + + + + GDG
Sbjct: 717 ------------DDLKALCLVIA---------RCAPQTKVKMIEALHRRKAFCAMT-GDG 754
Query: 649 ANDVGMLQEADIGVGISGVEGMQ-AVMSSDIAIAQFRFLERLLLV-HGHWCYRRISSMIC 706
ND L+ A++G+ + G+ G A +SDI ++ F L + G + I +
Sbjct: 755 VNDSPSLKMANVGIAM-GINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVL 813
Query: 707 YFFYKNIAFGFTL-----FFFEAYAS-FSGQPVYNDWFLSLYNVFFTSLPVIALGV 756
+ +N+A L F E S F PV W + + P + LG+
Sbjct: 814 HLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWC----IMITSCFPAMGLGL 865
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 3e-07
Identities = 31/147 (21%), Positives = 52/147 (35%), Gaps = 25/147 (17%)
Query: 609 ELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVE 668
+A + R SP+QK + ++ K GDG ND L++AD+G+ +
Sbjct: 421 AIAKELGIDVFARVSPEQKLQIVEALQ-KKGHIVAMTGDGVNDAPALKKADVGIAMG--- 476
Query: 669 GMQAVMSSDIAIAQFRFLERLLLV-HGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYAS 727
A ++DI + + V G + I S I + IA+ L
Sbjct: 477 ---AKAAADIVLLDDDLSAIVKAVKEGRKIFSNIKSNIFW----AIAYNLILIPLAL--- 526
Query: 728 FSGQPVYNDWFLSLYNVFFTSLPVIAL 754
L + + L +AL
Sbjct: 527 ----------LLIVIILLLPMLAALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 5e-07
Identities = 74/294 (25%), Positives = 122/294 (41%), Gaps = 79/294 (26%)
Query: 393 LLLSKGADSVMFERLAE---NGRE--FEEQTKEHIN----EYADAGLRTLILAYRELDEK 443
LL+ KGA + ER + +G+E +E+ KE E G R L + L ++
Sbjct: 478 LLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDE 537
Query: 444 EYK---QFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDK 500
++ QF+ T+ N + NL +G ++ D + VP+ + K
Sbjct: 538 QFPEGFQFD---TDDVNFPT---------------DNLCFVGLISMIDPPRAAVPDAVGK 579
Query: 501 LAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT------LEKSEDK 554
AGIK+ ++TGD TA I ++ +G +ET E + + +
Sbjct: 580 CRSAGIKVIMVTGDHPITAKAIAKGVGIISEG-------NETVEDIAARLNIPVSQVNPR 632
Query: 555 SAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGC 614
A KA V+H G +L D ++E L + L Y E
Sbjct: 633 DA-----KACVVH----GSDLKDMTSEQLD--------EILKYHTE-------------- 661
Query: 615 ASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGV--GISG 666
++ R+SP+QK ++ + + + GDG ND L++ADIGV GI+G
Sbjct: 662 --IVFARTSPQQKLIIVEGCQ-RQGAIVAVTGDGVNDSPALKKADIGVAMGIAG 712
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 5e-07
Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 30/160 (18%)
Query: 364 RSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFE---RLAENG--REFEEQT 418
Y ++ L F R+R+SV+V +G LL+ KGA M + + R +E
Sbjct: 437 AGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEAR 496
Query: 419 KEHI----NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKI 474
+E + Y G R L++A RE+ E++ S
Sbjct: 497 RERLLALAEAYNADGFRVLLVATREIPG----------GESRAQYSTAD----------- 535
Query: 475 EKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGD 514
E++L++ G D + I L + G+ + VLTGD
Sbjct: 536 ERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGD 575
|
Length = 903 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 5e-04
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 6/136 (4%)
Query: 426 ADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIE-KNLILLGAT 484
A G+ +I A L ++ ++ + EEL A + +L++LG
Sbjct: 30 AALGVAIVIAAGENLTKEGREELVRRLLLRALAGEELLEELLRAGATVVAVLDLVVLGLI 89
Query: 485 AVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE 544
A+ D L G E + +L +AGIKL +LTGD TA I G+ ++S++
Sbjct: 90 ALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAI-----ARLLGLFDALVSADLYG 144
Query: 545 SKTLEKSEDKSAAAAA 560
+ K + K A
Sbjct: 145 LVGVGKPDPKIFELAL 160
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 0.002
Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 36/152 (23%)
Query: 374 FSSSRKRMSVIVRSEEGTLLLLSKGADSVMFE---RLAENGR------EFEEQTKEHINE 424
F R+RMSV+V L+ KGA + ++ NG + K +
Sbjct: 449 FDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDT 508
Query: 425 YADAGLRTLILAYREL--DEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLG 482
GLR + +A + L E +Y++ AD E +LIL G
Sbjct: 509 LNRQGLRVVAVATKYLPAREGDYQR-------------AD------------ESDLILEG 543
Query: 483 ATAVEDKLQNGVPECIDKLAQAGIKLWVLTGD 514
A D + + L +G+ + +LTGD
Sbjct: 544 YIAFLDPPKETTAPALKALKASGVTVKILTGD 575
|
Length = 902 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.004
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 365 SYSLLNVLEFSSSRKRMSVIVRS-EEGTLLLLSKGADSVMFERLAENGREFEEQTKEHIN 423
Y +L + F KR V E G ++KGA V+ L +N +E EE+ +E ++
Sbjct: 352 GYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVIL-DLCDNKKEIEEKVEEKVD 410
Query: 424 EYADAGLRTLILAY 437
E A G R L +A
Sbjct: 411 ELASRGYRALGVAR 424
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 978 | |||
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.87 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.55 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.52 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.33 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.31 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.87 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.79 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.77 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.75 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.69 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.66 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.66 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.65 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.59 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.56 | |
| PLN02887 | 580 | hydrolase family protein | 98.54 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.53 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.52 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.51 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.45 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.39 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.38 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.32 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 98.29 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.25 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.24 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.21 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.18 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.16 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.14 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.11 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.1 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.09 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.08 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.05 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.02 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.01 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.99 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.96 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.94 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 97.91 | |
| PLN02954 | 224 | phosphoserine phosphatase | 97.91 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.85 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.82 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.81 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.74 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.7 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.68 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.67 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.66 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.61 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.45 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.35 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.19 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.17 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.07 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.05 | |
| PLN02423 | 245 | phosphomannomutase | 96.98 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.96 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.87 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 96.85 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.83 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.79 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.78 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.74 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.73 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 96.73 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 96.62 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.49 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.41 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.28 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.21 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.15 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.15 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.12 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.09 | |
| PLN03017 | 366 | trehalose-phosphatase | 95.96 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 95.94 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 95.92 | |
| PRK06769 | 173 | hypothetical protein; Validated | 95.86 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 95.83 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 95.66 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.61 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 95.6 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.45 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 95.43 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.27 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 95.26 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.22 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.04 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 95.01 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.01 | |
| PLN02940 | 382 | riboflavin kinase | 94.91 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 94.67 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 94.65 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 94.61 | |
| PLN02151 | 354 | trehalose-phosphatase | 94.52 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 94.48 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 94.46 | |
| PLN02811 | 220 | hydrolase | 94.45 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 94.42 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 94.15 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 93.48 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 93.35 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 92.73 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 92.72 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 92.63 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 92.39 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 92.3 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 92.25 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 92.01 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 91.89 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 91.21 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 90.94 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 90.62 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 90.46 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 89.36 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 89.0 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 87.93 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 87.68 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 87.62 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 87.23 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 87.01 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 86.25 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 84.84 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 84.8 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 83.27 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 82.74 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 82.4 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 81.87 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 81.71 |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-168 Score=1501.34 Aligned_cols=901 Identities=60% Similarity=0.995 Sum_probs=814.9
Q ss_pred ccccccceEEEEecCCCCCcceeEEEEEECCccccCCcCceeecCceeccCCeEEEEEEEeCccchhccccCCCCCCcCH
Q 002029 4 DSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSK 83 (978)
Q Consensus 4 ~~~~~~~~g~i~~e~p~~~l~~f~G~~~~~~~~~pl~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~~~~~~~k~s~ 83 (978)
++.+.+++|.|+||+||.++|.|+|++..+++..|++++|+++|||+++||.|++|+|++||++||+|+|+.+++.|+|+
T Consensus 192 ~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n~~~~~~Krs~ 271 (1151)
T KOG0206|consen 192 EDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQNSGKPPSKRSR 271 (1151)
T ss_pred cccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHhcCCCccccch
Confidence 45578899999999999999999999998877779999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccc
Q 002029 84 VERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPI 163 (978)
Q Consensus 84 l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~ 163 (978)
+++.+|..+..++++++++|++++++.++|......... ..||+..+. .....+..|++++++++.+||+
T Consensus 272 ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~---------~~~~~~~~f~t~~il~~~liPI 341 (1151)
T KOG0206|consen 272 IERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNG-EWWYLSPSE---------AAYAGFVHFLTFIILYQYLIPI 341 (1151)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccC-chhhhcCch---------HHHHHHHHHHHHHhhhhceEEE
Confidence 999999999999999999999999999998874322111 367776532 3456788999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchH
Q 002029 164 SLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTE 243 (978)
Q Consensus 164 sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~ 243 (978)
|||+++|+++++|+.||++|.+||+++++.++.+|+++++|+||||+||++|||||||+|.|+|++|+++|..|+...++
T Consensus 342 SLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~ 421 (1151)
T KOG0206|consen 342 SLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTE 421 (1151)
T ss_pred EEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987665
Q ss_pred HHHHHHhhcCCCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecC
Q 002029 244 VERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 323 (978)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~ 323 (978)
.+....++.+.. ......+++.|.|++++++.+...++++..++|++++|+||++.++.+++++.+.|+++
T Consensus 422 ~~~~~~~~~~~~---------~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~ 492 (1151)
T KOG0206|consen 422 VEAALAKRSGGD---------VNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAE 492 (1151)
T ss_pred hhcccCcccccc---------ccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecC
Confidence 432222111100 01123467889999999988888889999999999999999999998766679999999
Q ss_pred CccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHH
Q 002029 324 SPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVM 403 (978)
Q Consensus 324 sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i 403 (978)
||||.|||++|+++|+.+..|+++.+.+...+. +++|++|+++||+|+|||||||||+|+|++++||||||++|
T Consensus 493 SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~------~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI 566 (1151)
T KOG0206|consen 493 SPDEAALVEAARELGFVFLGRTPDSVTIRELGV------EETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVI 566 (1151)
T ss_pred CCcHHHHHHHHHhcCceeeeccCceEEEecccc------ceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhh
Confidence 999999999999999999999999999995552 48999999999999999999999999999999999999999
Q ss_pred HHHhcccchhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEE
Q 002029 404 FERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGA 483 (978)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~ 483 (978)
++++..+++...+.+.+|+++||.+||||||+|||+++++||++|+++|++|++++ .||+++++++++.+|+||+++|+
T Consensus 567 ~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~-~~Re~~L~e~ae~iEk~L~LLGA 645 (1151)
T KOG0206|consen 567 FERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSL-TDREELLDEVAEEIEKDLILLGA 645 (1151)
T ss_pred HhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhc-cCHHHHHHHHHHHHHhcchhhcc
Confidence 99999888889999999999999999999999999999999999999999999999 79999999999999999999999
Q ss_pred EeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHH
Q 002029 484 TAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKA 563 (978)
Q Consensus 484 i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (978)
+||||+||+|||++|+.|++||||+|||||||+|||++||.+|+++.+++..+.++..+.+..... +... ...+
T Consensus 646 TAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~-----~~~~-~~~~ 719 (1151)
T KOG0206|consen 646 TAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSL-----DATA-ALKE 719 (1151)
T ss_pred eeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcch-----hhHH-HHHH
Confidence 999999999999999999999999999999999999999999999999999999988764411111 1111 2223
Q ss_pred HHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEE
Q 002029 564 SVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTL 643 (978)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~ 643 (978)
.+..+..........+... ...+++|||+++.++++++.+..|..++..|++|+|||+||.||+.+|+++|+..+.+++
T Consensus 720 ~l~~~~~~~~~~~~~~~~~-~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TL 798 (1151)
T KOG0206|consen 720 TLLRKFTEELEEAKLEHSE-KPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTL 798 (1151)
T ss_pred HHHHhhhHHHHHHhhccCc-CCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEE
Confidence 3333332222222111111 479999999999999999888999999999999999999999999999999977899999
Q ss_pred EEcCCcCCHHHhhhccccccccCCccchhccccceehhchhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHH
Q 002029 644 AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFE 723 (978)
Q Consensus 644 aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~ 723 (978)
|||||+||++|+|+|||||||+|.||+||+++|||++.+|++|.+||++||||+|.|++++++|+||||+.+++++|||+
T Consensus 799 AIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~ 878 (1151)
T KOG0206|consen 799 AIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQ 878 (1151)
T ss_pred EeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccccccchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHH
Q 002029 724 AYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFF 803 (978)
Q Consensus 724 ~~~~~s~~~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 803 (978)
++++|||++++++|++.+||++||++|++++|++|||++.++++++|+||+.++++..|+++.|+.|++.|++|++++|+
T Consensus 879 f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff 958 (1151)
T KOG0206|consen 879 FFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFF 958 (1151)
T ss_pred hcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccccccCCCceehhhHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHhccCccccc-hh
Q 002029 804 FCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYIST-TA 882 (978)
Q Consensus 804 ~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~~~~~~~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~-~~ 882 (978)
+++..+.......+|.+.+.+.+|+.+||++|+++++++++++++|+|++|+.+|+|+++||++.+++...++.+.. ..
T Consensus 959 ~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~ywT~i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~ 1038 (1151)
T KOG0206|consen 959 LPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSYWTWINHIVIWGSILLWFVFLFIYSELTPAISTPDP 1038 (1151)
T ss_pred eeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehheeHHHHHHHHHHHHHHHHHHHHHhccccccCCCcc
Confidence 99998876677889999999999999999999999999999999999999999999999999999999864433332 44
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHcCC
Q 002029 883 YKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQ 937 (978)
Q Consensus 883 ~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~~r~~~p~~~~~~re~~~~~~ 937 (978)
|.+++.....+|.+|+.++++++++++|+++++.+++.++|++++++||+++..+
T Consensus 1039 ~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~~~~~~~~ 1093 (1151)
T KOG0206|consen 1039 FYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQEIEKYRR 1093 (1151)
T ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHHHHHhccc
Confidence 5557888999999999999999999999999999999999999999999997443
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-151 Score=1407.52 Aligned_cols=898 Identities=37% Similarity=0.613 Sum_probs=755.1
Q ss_pred cccceEEEEecCCCCCcceeEEEEEECCccccCCcCceeecCceeccCCeEEEEEEEeCccchhccccCCCCCCcCHHHH
Q 002029 7 FQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVER 86 (978)
Q Consensus 7 ~~~~~g~i~~e~p~~~l~~f~G~~~~~~~~~pl~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~~~~~~~k~s~l~~ 86 (978)
..+++|.|+||.||+++|+|+|++.++|+..|++.+|+++|||+|+||+|++|+|||||+|||+++|..+++.|+|++|+
T Consensus 248 ~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~N~~~~~~K~S~le~ 327 (1178)
T PLN03190 248 KEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAMLNNSGAPSKRSRLET 327 (1178)
T ss_pred hhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhhcCCCCCCCccHHHH
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCC---CcCCchhhHHHHHHHHHHHHHHHhccccc
Q 002029 87 RMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTT---AYYDPKRAAVAAVLHFLTALMLYGYLIPI 163 (978)
Q Consensus 87 ~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~iP~ 163 (978)
.+|+++.+++++++++|++++++..+|......+..+..||+..+... ..++...+....+..|+++++++..+||+
T Consensus 328 ~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~lil~~~~IPI 407 (1178)
T PLN03190 328 RMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPI 407 (1178)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHHhhcce
Confidence 999999999999999999999888777643322211223444221110 00111112234466788899999999999
Q ss_pred hhhhhHHHHHHHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchH
Q 002029 164 SLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTE 243 (978)
Q Consensus 164 sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~ 243 (978)
||+|++|++|++|+++|++|.+||+++.+.++.+|+++++|+||+|+|||||||||||+|+|+|++|+++|..|+.+...
T Consensus 408 SL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~ 487 (1178)
T PLN03190 408 SLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTP 487 (1178)
T ss_pred eeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEEccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999753221
Q ss_pred HHHHHHhhcCCCCccchhhhhhcccccCCcc-cCchhhhcCCC--CCCCChHHHHHHHHHHhhhcceeccccCC--C---
Q 002029 244 VERAMARRKGSPLEEEVTEEQEDKASIKGFN-FEDERIMNGSW--VNEPHADVIQKFLRLLAICHTALPEVDEE--N--- 315 (978)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~--~~~~~~~~~~~~~~~lalC~~~~~~~~~~--~--- 315 (978)
.+.... ......+ +....+..+ +.++.+.+... ...+..+.+++|++++|+||++.++..++ +
T Consensus 488 ~~~~~~-~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~ 558 (1178)
T PLN03190 488 TQNDHA-GYSVEVD--------GKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTV 558 (1178)
T ss_pred chhhhh-ccccccc--------cccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccc
Confidence 110000 0000000 000000001 12233322111 11122346789999999999999853211 1
Q ss_pred CcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEE
Q 002029 316 GKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLL 395 (978)
Q Consensus 316 ~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 395 (978)
+.+.|+|+||||.||+++|+++|+.+..|+++.+.+...+. +.+|++++++||+|+|||||||++++++++++|
T Consensus 559 ~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~------~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~ 632 (1178)
T PLN03190 559 KLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGE------RQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVF 632 (1178)
T ss_pred cceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccc------eecceeEEEecccccccEEEEEEEcCCCcEEEE
Confidence 24689999999999999999999999999999998887665 388999999999999999999999998999999
Q ss_pred EeCCchHHHHHhccc-chhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHh
Q 002029 396 SKGADSVMFERLAEN-GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKI 474 (978)
Q Consensus 396 ~KGa~~~i~~~~~~~-~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~i 474 (978)
|||||++|+++|++. +....+.+.+++++|+.+|+||||+|||+++++|+++|.++|++|+.++ .+|+++++++.+.+
T Consensus 633 ~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~l~~~~~~i 711 (1178)
T PLN03190 633 VKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTAL-IGRAALLRKVASNV 711 (1178)
T ss_pred EecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhh-hhhHHHHHhhHHhh
Confidence 999999999999864 3356778899999999999999999999999999999999999999999 99999999999999
Q ss_pred hcccEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhH
Q 002029 475 EKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDK 554 (978)
Q Consensus 475 e~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~ 554 (978)
|+||+++|+++++|+||++++++|+.|++|||++||+|||+.+||++||++|||+++++..+.++.++.+. ..
T Consensus 712 E~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~-------~~ 784 (1178)
T PLN03190 712 ENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKES-------CR 784 (1178)
T ss_pred hcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhh-------HH
Confidence 99999999999999999999999999999999999999999999999999999999998888876654211 11
Q ss_pred HHHHHHHHHHHHHHHHh---hhhh-hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHH
Q 002029 555 SAAAAALKASVLHQLIR---GKEL-LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALV 630 (978)
Q Consensus 555 ~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~i 630 (978)
..++...... .+... ..+. ...........+++++|.++..++++++++.|.+++..|++|||||++|+||+++
T Consensus 785 ~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~I 862 (1178)
T PLN03190 785 KSLEDALVMS--KKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGI 862 (1178)
T ss_pred HHHHHHhhhh--hhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHH
Confidence 1111111000 00000 0000 0011123456789999999999998888889999999999999999999999999
Q ss_pred HHHHHccCCCeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhchhhhHHHHHHhhhhhhhHhhHhHHHHHH
Q 002029 631 TRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFY 710 (978)
Q Consensus 631 V~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~~l~~lll~~gR~~~~~i~~~i~~~~~ 710 (978)
|+.+|+..+++|+|||||+||++|||+||||||++|+||.||+++|||+|.+|++|.+||++|||++|+|++++++|+||
T Consensus 863 V~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fY 942 (1178)
T PLN03190 863 VALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFY 942 (1178)
T ss_pred HHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 99999855689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHH
Q 002029 711 KNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGW 790 (978)
Q Consensus 711 ~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~ 790 (978)
||+++++++|||+++++|||+++|++|.+++||++||++|++++|++|+|++++.++++|+||+.+++++.++.+.|+.|
T Consensus 943 KN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w 1022 (1178)
T PLN03190 943 RNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLT 1022 (1178)
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccccCCCceehhhHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHH
Q 002029 791 ALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLA 870 (978)
Q Consensus 791 ~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~~~~~~~~~~~~~~i~~si~~~~i~~~i 870 (978)
++.|+|||+++|+++++.+.... .+.+.+++++++++++++++++++.+++|+|+++.++|+|+++++++.++
T Consensus 1023 ~~~~i~qs~iiff~~~~~~~~~~-------~~~~~~~~~~~~~~v~~vnl~i~~~~~~wt~~~~~~i~~Si~~~~i~~~~ 1095 (1178)
T PLN03190 1023 MIDTLWQSAVVFFVPLFAYWAST-------IDGSSIGDLWTLAVVILVNLHLAMDIIRWNWITHAAIWGSIVATFICVIV 1095 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC-------cCceeEhHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888765321 12334577888899999999999999999999999999999999999988
Q ss_pred HhccCccccchhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHcCCCCC
Q 002029 871 YGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDD 940 (978)
Q Consensus 871 ~~~i~~~~~~~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~~r~~~p~~~~~~re~~~~~~~~~ 940 (978)
+..+|.. . .|+.+ ..+..+|.||+.++++++++++|+++++++++.|+|++++++||.++....++
T Consensus 1096 ~~~~~~~-~--~~~~~-~~~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~ 1161 (1178)
T PLN03190 1096 IDAIPTL-P--GYWAI-FHIAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIAREAEKFGTFRE 1161 (1178)
T ss_pred HHhcccc-h--hHHHH-HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhccccc
Confidence 8877632 2 24433 35678999999999999999999999999999999999999999776655333
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-142 Score=1341.97 Aligned_cols=891 Identities=51% Similarity=0.866 Sum_probs=763.9
Q ss_pred cccccceEEEEecCCCCCcceeEEEEEECC-ccccCCcCceeecCceeccCCeEEEEEEEeCccchhccccCCCCCCcCH
Q 002029 5 SNFQNFKAIIRCEDPNANLYTFVGSLELEE-QQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSK 83 (978)
Q Consensus 5 ~~~~~~~g~i~~e~p~~~l~~f~G~~~~~~-~~~pl~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~~~~~~~k~s~ 83 (978)
+++.+++|.|+||.||+++|+|.|.+.+++ +..|++.+|+++|||.|+||||++|+|+|||++||+++|...++.|+|+
T Consensus 163 ~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~k~s~ 242 (1057)
T TIGR01652 163 DDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKRSR 242 (1057)
T ss_pred hhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCcccccH
Confidence 445678999999999999999999999987 7889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccc
Q 002029 84 VERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPI 163 (978)
Q Consensus 84 l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~ 163 (978)
+|+.+|+++.+++.+++++|++++++..+|...... ..||+..+.. ..+.....+..+++++++++.+||+
T Consensus 243 le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~----~~~yl~~~~~-----~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 243 LEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGK----DLWYIRLDVS-----ERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCC----CccceecCcc-----cccchhHHHHHHHHHHHHHhhhcce
Confidence 999999999999999999999998877676643222 2688764321 1222344566889999999999999
Q ss_pred hhhhhHHHHHHHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchH
Q 002029 164 SLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTE 243 (978)
Q Consensus 164 sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~ 243 (978)
+||+++++++++++++|++|.+||+++.++++++|+++++|+||+|+|||||||||||+|+|+|++|+++|..|+.+..+
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999999999999999988778899999999999999999999999999999999999999999999865432
Q ss_pred HHHHHHhhcCCCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccc-cCCCCcEEEec
Q 002029 244 VERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEV-DEENGKISYEA 322 (978)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~-~~~~~~~~y~~ 322 (978)
......+..+...+... ......+..+|.++++.+.....++..+.+++|++++++||++.++. +++.+.+.|++
T Consensus 394 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~ 469 (1057)
T TIGR01652 394 IKDAIRERLGSYVENEN----SMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQA 469 (1057)
T ss_pred HHHHhhhcccccccccc----cccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEc
Confidence 21111111110000000 00001122345565555433223344567889999999999999875 23334588999
Q ss_pred CCccHHHHHHHHHHcCCEEEeecCceeE--EEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCc
Q 002029 323 ESPDEAAFVIAARELGFEFYERTQTSIS--VHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGAD 400 (978)
Q Consensus 323 ~sp~E~Alv~~a~~~g~~~~~r~~~~~~--i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~ 400 (978)
+||+|.||+++|+++|+.+.+|+++.+. +...+. ...|++++++||+|+||||||+++++++++++|+||||
T Consensus 470 ~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~------~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~ 543 (1057)
T TIGR01652 470 ASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGE------TKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGAD 543 (1057)
T ss_pred cCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCC------EEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcH
Confidence 9999999999999999999999988443 433333 47899999999999999999999999889999999999
Q ss_pred hHHHHHhcccchhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEE
Q 002029 401 SVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLIL 480 (978)
Q Consensus 401 ~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~l 480 (978)
++|+++|...++...+.+.+++++|+.+|+|||++|||.++++|+++|.++|++|+.++ .+|++.+++..+.+|+||+|
T Consensus 544 e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~~~~~~~~iE~~L~~ 622 (1057)
T TIGR01652 544 TVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTAL-TDREEKLDVVAESIEKDLIL 622 (1057)
T ss_pred HHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHhcCEE
Confidence 99999998654556788899999999999999999999999999999999999999998 89999999999999999999
Q ss_pred EEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHH
Q 002029 481 LGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAA 560 (978)
Q Consensus 481 lG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~ 560 (978)
+|++|+|||||+||+++|+.|++||||+||+|||+.+||++||++||++.++...+.++.++.+... .....+.
T Consensus 623 lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~----~~~~~i~-- 696 (1057)
T TIGR01652 623 LGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATR----SVEAAIK-- 696 (1057)
T ss_pred EEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhH----HHHHHHH--
Confidence 9999999999999999999999999999999999999999999999999988887777765422110 0001111
Q ss_pred HHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCC
Q 002029 561 LKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSS 640 (978)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~ 640 (978)
.+......... ........+++++|++++.+++++++++|.+++..|+++||||++|+||+++|+.+|+..|+
T Consensus 697 ------~~~~~~~~~~~-~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~ 769 (1057)
T TIGR01652 697 ------FGLEGTSEEFN-NLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGK 769 (1057)
T ss_pred ------HHHHHHHHhhh-hhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCC
Confidence 11111011110 01124567899999999999988888899999999999999999999999999999984499
Q ss_pred eEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhchhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHH
Q 002029 641 TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 720 (978)
Q Consensus 641 ~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~ 720 (978)
+|+|||||+||++||++||||||++|+|+.||+.+|||++.+|++|.++|++|||++|+|+++++.|.||||++++++++
T Consensus 770 ~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~ 849 (1057)
T TIGR01652 770 TTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQF 849 (1057)
T ss_pred eEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred HHHHhhccccccchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHH
Q 002029 721 FFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAI 800 (978)
Q Consensus 721 ~~~~~~~~s~~~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~ 800 (978)
+|.++++|+|++++++++++|||+++|++|++++|++|+|++++.+.++|++|+.+++++.++.+.|+.|++.|++|+++
T Consensus 850 ~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~i 929 (1057)
T TIGR01652 850 WYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLV 929 (1057)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccccCCCceehhhHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHhccCccccc
Q 002029 801 IFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYIST 880 (978)
Q Consensus 801 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~~~~~~~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~ 880 (978)
+|++.++.+.......+|...+.+.+++++|+++++++++++++.+++|+|+++..+|+|+++++++.+++..++. ..
T Consensus 930 i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wt~~~~~~~~~S~~~~~~~~~~~~~~~~--~~ 1007 (1057)
T TIGR01652 930 IFFFPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILVWLIFVIVYSSIFP--SP 1007 (1057)
T ss_pred HHHHHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcc--cc
Confidence 9999888876544446788889999999999999999999999999999999999999999999999888876542 33
Q ss_pred hhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHH
Q 002029 881 TAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQW 931 (978)
Q Consensus 881 ~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~~r~~~p~~~~~~re 931 (978)
..|+ .+..+..+|.+|+.++++++++++|+++++++++.|+|+.++++||
T Consensus 1008 ~~~~-~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~~~i~~ 1057 (1057)
T TIGR01652 1008 AFYK-AAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYDIVQE 1057 (1057)
T ss_pred cHHH-HHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhC
Confidence 4455 4446778999999999999999999999999999999999999875
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-127 Score=1048.96 Aligned_cols=806 Identities=31% Similarity=0.507 Sum_probs=699.9
Q ss_pred cccccceEEEEecCCCCCcceeEEEEEEC--CccccCCcCceeecCceeccCCeEEEEEEEeCccchhccccCCCCCCcC
Q 002029 5 SNFQNFKAIIRCEDPNANLYTFVGSLELE--EQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRS 82 (978)
Q Consensus 5 ~~~~~~~g~i~~e~p~~~l~~f~G~~~~~--~~~~pl~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~~~~~~~k~s 82 (978)
+++.+++ |..|+|+.++|+|.|++++. ++..|++.+|.++++|+|.+ |.++|+|+|||.||+-+||.+.++.|-.
T Consensus 240 ~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs-~t~~gvVvYTG~dtRsvMNts~pr~KvG 316 (1051)
T KOG0210|consen 240 SELMEIS--VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVAS-GTAIGVVVYTGRDTRSVMNTSRPRSKVG 316 (1051)
T ss_pred cchheEE--EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEec-CcEEEEEEEecccHHHHhccCCcccccc
Confidence 3455555 99999999999999999995 34678999999999999996 8899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhcccc
Q 002029 83 KVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIP 162 (978)
Q Consensus 83 ~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP 162 (978)
.++..+|.+.++++++.++++++..... +.. ..||+ .+++++.|++.+||
T Consensus 317 llelEiN~ltKiL~~~vlvLs~vmv~~~----g~~------~~wyi--------------------~~~RfllLFS~IIP 366 (1051)
T KOG0210|consen 317 LLELEINGLTKILFCFVLVLSIVMVAMK----GFG------SDWYI--------------------YIIRFLLLFSSIIP 366 (1051)
T ss_pred eeeeecccHHHHHHHHHHHHHHHHHHhh----cCC------CchHH--------------------HHHHHHHHHhhhce
Confidence 9999999999999988888777654332 222 26876 78999999999999
Q ss_pred chhhhhHHHHHHHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCch
Q 002029 163 ISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVT 242 (978)
Q Consensus 163 ~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~ 242 (978)
++|.+.++++|.+.++.|.+|.++ .+..+|++++.|+||+|.|+.+|||||||+|+|+|++++.+-..|+.+..
T Consensus 367 ISLRvnlDmaK~~ys~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~ 440 (1051)
T KOG0210|consen 367 ISLRVNLDMAKIVYSWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETM 440 (1051)
T ss_pred eEEEEehhHHHhhHhhhcccCCCC------CceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHH
Confidence 999999999999999999998877 57899999999999999999999999999999999999999999875433
Q ss_pred H-HHHHHHhhcCCCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEe
Q 002029 243 E-VERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYE 321 (978)
Q Consensus 243 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~ 321 (978)
+ ++.....-.+.. +...+.. .....++-...+++..+++|+||++.|..++ +|...||
T Consensus 441 ~eV~~~i~s~~~~~-----------~~~~~~~---------~~~~k~~~s~rv~~~V~alalCHNVTPv~e~-~ge~sYQ 499 (1051)
T KOG0210|consen 441 DEVSQHIQSLYTPG-----------RNKGKGA---------LSRVKKDMSARVRNAVLALALCHNVTPVFED-DGEVSYQ 499 (1051)
T ss_pred HHHHHHHHHhhCCC-----------ccccccc---------chhhcCcccHHHHHHHHHHHHhccCCcccCC-CceEEee
Confidence 2 222221111100 0000000 0112234556788999999999999998765 4699999
Q ss_pred cCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeC-CCeEEEEEeCCc
Q 002029 322 AESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE-EGTLLLLSKGAD 400 (978)
Q Consensus 322 ~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~ 400 (978)
+.||||.|||++.+..|..+..|+.+.+.++.+.+. ...|+||.++||+|+.|||++|||++ .+++..|.||||
T Consensus 500 AaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~-----~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD 574 (1051)
T KOG0210|consen 500 AASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDD-----ELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGAD 574 (1051)
T ss_pred cCCCCeEEEEEeeeecceEEeecccceEEEecCCCc-----ceeEEEEEEeccccccceeeEEEecCCCceEEEEEecch
Confidence 999999999999999999999999999999887654 58999999999999999999999997 789999999999
Q ss_pred hHHHHHhcccchhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHH-HhhcccE
Q 002029 401 SVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAE-KIEKNLI 479 (978)
Q Consensus 401 ~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~-~ie~dl~ 479 (978)
.+|-.....+ +..++...+||.+|+|||++|+|.++++||+.|.+.|+.|+.++ .||+++..++.+ .+|+||+
T Consensus 575 ~VMs~iVq~N-----dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi-~dR~~~ma~vv~~~LE~dle 648 (1051)
T KOG0210|consen 575 VVMSGIVQYN-----DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSI-SDRDQKMANVVERYLERDLE 648 (1051)
T ss_pred HHHhcccccc-----hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCcc-chHHHHHHHHHHHHHHhhhH
Confidence 9997766543 57788889999999999999999999999999999999999999 899999999887 8999999
Q ss_pred EEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHH
Q 002029 480 LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAA 559 (978)
Q Consensus 480 llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~ 559 (978)
++|++|+||+||++|+.+++.||+|||||||||||+.|||+.||++.+|+..++.+..+..-..... ..+.+.
T Consensus 649 lL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~d------ah~eL~- 721 (1051)
T KOG0210|consen 649 LLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGD------AHNELN- 721 (1051)
T ss_pred HhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchH------HHHHHH-
Confidence 9999999999999999999999999999999999999999999999999999988877766532211 011110
Q ss_pred HHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCC
Q 002029 560 ALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS 639 (978)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~ 639 (978)
. .......+++|+|++++..++ .+++.|.++.+.|.+|||||++|.||+++++++|++.+
T Consensus 722 ---------------~----lR~k~~~aLvi~G~Sl~~cl~-yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~ 781 (1051)
T KOG0210|consen 722 ---------------N----LRRKTDCALVIDGESLEFCLK-YYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTG 781 (1051)
T ss_pred ---------------H----hhcCCCcEEEEcCchHHHHHH-HHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhC
Confidence 0 124567899999999997776 77888999999999999999999999999999999999
Q ss_pred CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhchhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHH
Q 002029 640 STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTL 719 (978)
Q Consensus 640 ~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~ 719 (978)
+.|++||||.||++|+|+||+||||.|+||.||..||||.|.+|+++.+||++|||.+|+|..+.-+|.+.+++....++
T Consensus 782 krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Q 861 (1051)
T KOG0210|consen 782 KRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQ 861 (1051)
T ss_pred ceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccccccchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHH
Q 002029 720 FFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAA 799 (978)
Q Consensus 720 ~~~~~~~~~s~~~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~ 799 (978)
.+|.....|...++|..+.|..|..++|.+|++.+ +.|+|+.++..+.+|+||+.-.+++.++.+.|+.|++.++||+.
T Consensus 862 avfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSl-v~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~ 940 (1051)
T KOG0210|consen 862 AVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSL-VLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGS 940 (1051)
T ss_pred HHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhhee-eecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHccc
Confidence 99999999999999999999999999999999999 77999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccccCCCceehhhHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHhccCcccc
Q 002029 800 IIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYIS 879 (978)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~~~~~~~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~ 879 (978)
++.++.++.+... +..+.++.|+++++...+++++..++|+|.....-..+++++++...+...+
T Consensus 941 vim~g~~~l~~~e----------f~~ivaisFtaLi~tELiMVaLtv~tw~~~m~vae~lsL~~Yivsl~~l~~y----- 1005 (1051)
T KOG0210|consen 941 VIMYGALLLFDTE----------FIHIVAISFTALILTELIMVALTVRTWHWLMVVAELLSLALYIVSLAFLHEY----- 1005 (1051)
T ss_pred HHHHHHHHHhhhh----------heEeeeeeeHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhH-----
Confidence 9998877666532 2245678999999999999999999999998888778888777655433221
Q ss_pred chhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHH
Q 002029 880 TTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQ 930 (978)
Q Consensus 880 ~~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~~r~~~p~~~~~~r 930 (978)
+-.....++.|++.+.++.+++++|.++.|+++|++.|+.|.+++
T Consensus 1006 ------fd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYaKl~ 1050 (1051)
T KOG0210|consen 1006 ------FDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYAKLQ 1050 (1051)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhcc
Confidence 111233567777778889999999999999999999999998875
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-99 Score=930.19 Aligned_cols=668 Identities=29% Similarity=0.427 Sum_probs=537.0
Q ss_pred CcCceeecCceeccCCeEEEEEEEeCccchhccccCC---CCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 002029 40 TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTG---PPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATRE 116 (978)
Q Consensus 40 ~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~~~~---~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~ 116 (978)
+..|++|+||.|++ |.+.|+|++||.+|+++++... ...+.||+++.++++...++.+.++++++.++.. .+.+.
T Consensus 215 d~~n~l~sGt~V~~-G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~-~~~~~ 292 (917)
T COG0474 215 DRDNMLFSGTTVVS-GRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVG-LFRGG 292 (917)
T ss_pred CccceEEeCCEEEc-ceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcC
Confidence 34699999999998 9999999999999988777643 2256799999999999999999999988887665 22221
Q ss_pred ccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccccCCCccc
Q 002029 117 DLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPAR 196 (978)
Q Consensus 117 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~ 196 (978)
. .| ...+++++++++++||++||+++++++++++. +| ++++++
T Consensus 293 ~-------~~--------------------~~~~~~~v~l~va~IPegLp~~vti~la~g~~------~m----ak~~~i 335 (917)
T COG0474 293 N-------GL--------------------LESFLTALALAVAAVPEGLPAVVTIALALGAQ------RM----AKDNAI 335 (917)
T ss_pred c-------cH--------------------HHHHHHHHHHHHhccccchHHHHHHHHHHHHH------HH----Hhccch
Confidence 1 12 33799999999999999999999999999999 56 889999
Q ss_pred ccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcccccCCcccC
Q 002029 197 ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFE 276 (978)
Q Consensus 197 ~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (978)
+|+++++|+||++++||||||||||+|+|+|++|++++. +.+..
T Consensus 336 vr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~--~~~~~---------------------------------- 379 (917)
T COG0474 336 VRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGG--GKDID---------------------------------- 379 (917)
T ss_pred hhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCC--ccccc----------------------------------
Confidence 999999999999999999999999999999999998851 00000
Q ss_pred chhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCC
Q 002029 277 DERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDP 356 (978)
Q Consensus 277 ~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~ 356 (978)
+ ......+...+++.++++||++.+..+ + .|..+||+|.||++++.+.|+.+ .+ .
T Consensus 380 ~--------~~~~~~~~~~~~l~~~~lc~~~~~~~~-~----~~~~gdptE~Al~~~a~~~~~~~-~~--~--------- 434 (917)
T COG0474 380 D--------KDLKDSPALLRFLLAAALCNSVTPEKN-G----WYQAGDPTEGALVEFAEKLGFSL-DL--S--------- 434 (917)
T ss_pred c--------cccccchHHHHHHHHHHhcCccccccc-C----ceecCCccHHHHHHHHHhcCCcC-CH--H---------
Confidence 0 000123344589999999999988755 3 66789999999999999999844 11 0
Q ss_pred CCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcc------cchhhHHHHHHHHHHHHHccc
Q 002029 357 VTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAE------NGREFEEQTKEHINEYADAGL 430 (978)
Q Consensus 357 ~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~------~~~~~~~~~~~~l~~~a~~Gl 430 (978)
.....|++++++||||+|||||||++..+++++++|||||++|+++|+. ..++.++.+.+..++|+.+||
T Consensus 435 ----~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~gl 510 (917)
T COG0474 435 ----GLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGL 510 (917)
T ss_pred ----HHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHH
Confidence 1236678999999999999999999977788999999999999999985 245677889999999999999
Q ss_pred eeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcCCeEEE
Q 002029 431 RTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWV 510 (978)
Q Consensus 431 r~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~m 510 (978)
|||++|||.+++++.. . .. +.+|+||+|+|+++++||||++|+++|+.|++|||++||
T Consensus 511 Rvla~A~k~~~~~~~~----------------~-----~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~M 568 (917)
T COG0474 511 RVLAVAYKKLDRAEKD----------------D-----EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWM 568 (917)
T ss_pred HHHHHHhccCCccccc----------------c-----hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEE
Confidence 9999999977654311 1 11 678999999999999999999999999999999999999
Q ss_pred EcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEEE
Q 002029 511 LTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALII 590 (978)
Q Consensus 511 lTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi 590 (978)
+|||+.+||++||++||+..+.. . .+++
T Consensus 569 iTGD~~~TA~aIa~~~Gi~~~~~---------------------------------------------------~-~~vi 596 (917)
T COG0474 569 ITGDHVETAIAIAKECGIEAEAE---------------------------------------------------S-ALVI 596 (917)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCC---------------------------------------------------c-eeEe
Confidence 99999999999999999754321 0 5699
Q ss_pred cCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhccccccccCCccc
Q 002029 591 DGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGM 670 (978)
Q Consensus 591 ~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~ 670 (978)
+|.+++.+.++++.+.+. .++ ||||+||+||.++|+.+|+ .|++|+|+|||+||+||||+|||||||.++...
T Consensus 597 ~G~el~~l~~~el~~~~~----~~~--VfARvsP~qK~~IV~~lq~-~g~vVamtGDGvNDapALk~ADVGIamg~~Gtd 669 (917)
T COG0474 597 DGAELDALSDEELAELVE----ELS--VFARVSPEQKARIVEALQK-SGHVVAMTGDGVNDAPALKAADVGIAMGGEGTD 669 (917)
T ss_pred ehHHhhhcCHHHHHHHhh----hCc--EEEEcCHHHHHHHHHHHHh-CCCEEEEeCCCchhHHHHHhcCccEEecccHHH
Confidence 999999888875555554 334 9999999999999999999 799999999999999999999999999653333
Q ss_pred hhccccceehhchhh--hHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhh
Q 002029 671 QAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTS 748 (978)
Q Consensus 671 ~a~~asD~vi~~f~~--l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~i~~~ 748 (978)
.|+++||+++.+.++ +..+ +.|||++|.|+++++.|.+++|+..+++++++.+++.+ ..|++++|++|+|+++++
T Consensus 670 aak~Aadivl~dd~~~~i~~a-v~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~--~~p~~~~qll~inll~d~ 746 (917)
T COG0474 670 AAKEAADIVLLDDNFATIVLA-VVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLF--FLPLTPLQLLWINLLTDS 746 (917)
T ss_pred HHHhhcceEeecCcHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cccHHHHHHHHHHHHHhh
Confidence 378899999998555 5555 99999999999999999999999999999999988765 567999999999999999
Q ss_pred hhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-cCCCceehhhHHH
Q 002029 749 LPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAF-RKGGEVIGLEILG 827 (978)
Q Consensus 749 ~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~ 827 (978)
+|++++|+++ ++...+++|+ ++++..+|+.+.++.|++...+++++++++.+..+..... ...+.........
T Consensus 747 ~pa~~L~~~~---~~~~~m~~~~---~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (917)
T COG0474 747 LPALALGVED---PESDVMKRPP---RGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQ 820 (917)
T ss_pred hhhheeecCC---CcccccccCC---CCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHH
Confidence 9999999975 3444555552 3788899999999999988888888888777765543221 1122111244667
Q ss_pred HHHHHHHHHHHHHHHHHhhcc----hh--hHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhcCChHHHHHHH
Q 002029 828 TTMYTCVVWVVNCQMALSVTY----FT--YIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITL 901 (978)
Q Consensus 828 ~~~f~~~v~~~~~~~~~~~~~----~~--~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~il 901 (978)
+++|+.+++.+.+..+..... +. ++.+..+|+++++..++.++..++|..... .|...+.+...|+.++
T Consensus 821 t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~-----~f~~~~~~~~~~~~~~ 895 (917)
T COG0474 821 TTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLK-----IFQPTPLSLFEWLIAI 895 (917)
T ss_pred HHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhh-----hccCCCCcHHHHHHHH
Confidence 888888888877776543222 11 236778888888888888888877753211 4456666677787766
Q ss_pred HHHHH
Q 002029 902 LVLMS 906 (978)
Q Consensus 902 ~~~~~ 906 (978)
++...
T Consensus 896 ~~~~~ 900 (917)
T COG0474 896 AVALL 900 (917)
T ss_pred HHHHH
Confidence 65533
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-98 Score=841.25 Aligned_cols=733 Identities=21% Similarity=0.271 Sum_probs=567.2
Q ss_pred CcCceeecCceeccCCeEEEEEEEeCccchhc---cccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhc
Q 002029 40 TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVF---QNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIF-FGIATR 115 (978)
Q Consensus 40 ~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~-~~~~~~ 115 (978)
++.|++|.||.|++ |.+.|+|+.||.+|+++ ..+...+..+||||++++.+...+..++.++|+.++++ .+++.
T Consensus 190 dk~NiaFsGT~V~~-G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~- 267 (972)
T KOG0202|consen 190 DKKNIAFSGTLVVA-GRAKGIVIGTGLNTEIGKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFL- 267 (972)
T ss_pred cceeeEeecceeec-CceeEEEEeccccchHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhc-
Confidence 56899999999998 99999999999999663 23344567789999999999999997777777766655 22222
Q ss_pred cccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccccCCCcc
Q 002029 116 EDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPA 195 (978)
Q Consensus 116 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~ 195 (978)
..... .+|+ ......|..+++|.+++||+|||+.+++..+++.+ +| +++++
T Consensus 268 ~p~~~---g~~f----------------k~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~------rM----akkna 318 (972)
T KOG0202|consen 268 DPVHG---GSWF----------------KGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTR------RM----AKKNA 318 (972)
T ss_pred ccccc---ccch----------------hchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHH------HH----Hhhhh
Confidence 11100 1333 23355788899999999999999999999999999 78 99999
Q ss_pred cccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcccccCCccc
Q 002029 196 RARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNF 275 (978)
Q Consensus 196 ~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (978)
+||+++.+|+||.+++||||||||||+|+|.+.++++.+..+... .+. . ..+...+ ..+-.+
T Consensus 319 IVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~-~~f--~---~tg~ty~------------~~g~v~ 380 (972)
T KOG0202|consen 319 IVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATV-DEF--N---PTGTTYS------------PEGEVF 380 (972)
T ss_pred hhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccc-ccc--c---cCCceeC------------CCCceE
Confidence 999999999999999999999999999999999999877654432 000 0 0000000 000001
Q ss_pred CchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecC
Q 002029 276 EDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELD 355 (978)
Q Consensus 276 ~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~ 355 (978)
.+.. . ........+.+++++.+.++||.+..++++. +.++- -|.|.|.||...|.+.|+.-......+ . .+ +
T Consensus 381 ~~~~-~--~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~~-~G~pTE~AL~vlaeKm~l~~~~~~~~s-~-~~-~ 452 (972)
T KOG0202|consen 381 KDGL-Y--EKDKAGDNDLLQELAEICALCNDATVEYNDA-DCYEK-VGEPTEGALIVLAEKMGLPGTRSTNLS-N-EE-A 452 (972)
T ss_pred ecCc-c--ccccccccHHHHHHHHHHHhhhhhhhhcCch-hhHHh-cCCchHHHHHHHHHHcCCCcchhhccc-c-cc-c
Confidence 0000 0 0001234567889999999999998876653 22222 378999999999999998643311100 0 00 1
Q ss_pred CCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCe--EEEEEeCCchHHHHHhccc-----------chhhHHHHHHHH
Q 002029 356 PVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGT--LLLLSKGADSVMFERLAEN-----------GREFEEQTKEHI 422 (978)
Q Consensus 356 ~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~--~~l~~KGa~~~i~~~~~~~-----------~~~~~~~~~~~l 422 (978)
..+.+.-.+.++...++||+|+||+|||.+.++.+. +.+|+|||+|.|+++|+.. .+..++.+.+..
T Consensus 453 ~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~ 532 (972)
T KOG0202|consen 453 SACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANV 532 (972)
T ss_pred ccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHH
Confidence 122222335567779999999999999999987664 8999999999999999542 345788999999
Q ss_pred HHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHH--HHHHhhcccEEEEEEeeccccCCChHHHHHH
Q 002029 423 NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEE--IAEKIEKNLILLGATAVEDKLQNGVPECIDK 500 (978)
Q Consensus 423 ~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~--~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~ 500 (978)
.+|+.+|||+|++|+++.+.. ...+..+.+ -+...|+||+|+|++|+.||+|++|+++|+.
T Consensus 533 ~~~g~~gLRvLalA~~~~~~~-----------------~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~ 595 (972)
T KOG0202|consen 533 YEMGSEGLRVLALASKDSPGQ-----------------VPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIEL 595 (972)
T ss_pred HHHhhccceEEEEEccCCccc-----------------ChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHH
Confidence 999999999999999977631 011111111 2357899999999999999999999999999
Q ss_pred HHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhcccc
Q 002029 501 LAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSN 580 (978)
Q Consensus 501 L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (978)
|++|||+|.|+|||+.+||.+||+++|+...+.+
T Consensus 596 c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed---------------------------------------------- 629 (972)
T KOG0202|consen 596 CRQAGIRVIMITGDNKETAEAIAREIGIFSEDED---------------------------------------------- 629 (972)
T ss_pred HHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc----------------------------------------------
Confidence 9999999999999999999999999998765421
Q ss_pred CCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhccc
Q 002029 581 ESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADI 660 (978)
Q Consensus 581 ~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~Adv 660 (978)
-....++|++++.+.++++.+... +..+|+|++|++|.+||+.||+ .|++|+|+|||+||+|+||.|||
T Consensus 630 ----~~~~~~TG~efD~ls~~~~~~~~~------~~~vFaR~~P~HK~kIVeaLq~-~geivAMTGDGVNDApALK~AdI 698 (972)
T KOG0202|consen 630 ----VSSMALTGSEFDDLSDEELDDAVR------RVLVFARAEPQHKLKIVEALQS-RGEVVAMTGDGVNDAPALKKADI 698 (972)
T ss_pred ----ccccccchhhhhcCCHHHHHHHhh------cceEEEecCchhHHHHHHHHHh-cCCEEEecCCCccchhhhhhccc
Confidence 012377888888777666654443 4559999999999999999998 99999999999999999999999
Q ss_pred cccc--cCCccchhccccceehhchhh--hHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhh
Q 002029 661 GVGI--SGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYND 736 (978)
Q Consensus 661 GI~i--~g~e~~~a~~asD~vi~~f~~--l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~ 736 (978)
||+| +|++. ||+|||+|+.|++| +..+ +.+||.+|.|+++++.|.++.|+..+..+|+...+. -..++++
T Consensus 699 GIAMG~~GTdV--aKeAsDMVL~DDnFstIvaA-VEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~---~p~pL~p 772 (972)
T KOG0202|consen 699 GIAMGISGTDV--AKEASDMVLADDNFSTIVAA-VEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFG---IPEPLIP 772 (972)
T ss_pred ceeecCCccHh--hHhhhhcEEecCcHHHHHHH-HHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhC---CCCcccc
Confidence 9977 46666 99999999999555 7778 899999999999999999999999999988887774 3346999
Q ss_pred HHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccc--cc
Q 002029 737 WFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQ--AF 814 (978)
Q Consensus 737 ~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~--~~ 814 (978)
+|++|+|++++.+|+.++|+++ ++++.+.+.|+ ..+..+++++.++.++..|+|.++++.+.+.+.+... ..
T Consensus 773 vQiLWiNlvtDG~PA~aLG~ep--~D~DiM~kpPR----~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~v 846 (972)
T KOG0202|consen 773 VQILWINLVTDGPPATALGFEP--VDPDIMKKPPR----DSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKV 846 (972)
T ss_pred hhhheeeeeccCCchhhcCCCC--CChhHHhCCCC----CCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCc
Confidence 9999999999999999999975 56677777776 7888999999999999999999998887776655521 11
Q ss_pred cCC----------------CceehhhHHHHHHHHHHHHHHHHHHHHhhcchh-------hHHHHHHHHHHHHHHHHHHHH
Q 002029 815 RKG----------------GEVIGLEILGTTMYTCVVWVVNCQMALSVTYFT-------YIQHLFIWGGITFWYIFLLAY 871 (978)
Q Consensus 815 ~~~----------------g~~~~~~~~~~~~f~~~v~~~~~~~~~~~~~~~-------~~~~~~i~~si~~~~i~~~i~ 871 (978)
+.+ ..........|+.|+++++.-.+.. +..++++ .+.|.++.+++++.++.++..
T Consensus 847 t~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNa-L~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~i 925 (972)
T KOG0202|consen 847 TYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNA-LNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLV 925 (972)
T ss_pred ChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHHH-hhcccCCcceEEecccccHHHHHHHHHHHHhhheE
Confidence 000 0000000122777888877665554 4455544 567888999999999999999
Q ss_pred hccCccccchhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 002029 872 GAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFF 922 (978)
Q Consensus 872 ~~i~~~~~~~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~~r~~~ 922 (978)
.|+|+ ++. +|+..++++..|+.++.+....++.++++|++.|.+.
T Consensus 926 lYvp~-l~~-----iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 926 LYVPP-LQR-----IFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred EEech-hhh-----hheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 99996 455 6778899999999999999999999999999999764
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-94 Score=811.65 Aligned_cols=717 Identities=21% Similarity=0.284 Sum_probs=566.8
Q ss_pred ecCCCCCcceeEE-EEEEC-----CccccC----CcCceeecCceeccCCeEEEEEEEeCccchh---ccccCCCCCCcC
Q 002029 16 CEDPNANLYTFVG-SLELE-----EQQYPL----TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRS 82 (978)
Q Consensus 16 ~e~p~~~l~~f~G-~~~~~-----~~~~pl----~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~~k~s 82 (978)
|.-|.+.+. ++| .+++| ||+.++ +.+.+|++||++.+ |.+.++|+.+|.+|+. |.........+|
T Consensus 250 DqvPADGvl-i~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~e-GsgkMlVTaVGmnt~wG~~m~~l~~~~~e~t 327 (1034)
T KOG0204|consen 250 DQVPADGVL-IQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVME-GSGKMLVTAVGMNTQWGIIMTLLGAGGEEET 327 (1034)
T ss_pred CccccceEE-EeccceeEecccccCCCcceeccCCCCCeEeecceeec-CcceEEEEEeeecchHhhHHHhhhcCCCcCC
Confidence 445555544 355 46665 666655 57889999999998 9999999999999965 444556666889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhcc
Q 002029 83 KVERRMDKIIYFLFGILVLMSFIGSIFFGIA--TREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYL 160 (978)
Q Consensus 83 ~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~--~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~ 160 (978)
|+|-++++++..+..+.++++++..++.... .+....++.. .| ..+......++..|..++.+++.+
T Consensus 328 pLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~-~~----------~~~~~~~~~~v~~f~i~VTilVVA 396 (1034)
T KOG0204|consen 328 PLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGT-GT----------TWSDEYIQEFVKFFIIAVTILVVA 396 (1034)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCC-Cc----------cccHHHHHHHHHHhhheeEEEEEE
Confidence 9999999999999888888877766554432 2211111000 01 112233456677888889999999
Q ss_pred ccchhhhhHHHHHHHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCC
Q 002029 161 IPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRG 240 (978)
Q Consensus 161 iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~ 240 (978)
+|++||+++++..++... +| .+.+.++|.++++|++|..+.||+|||||||.|+|++.+.++++..|..+
T Consensus 397 VPEGLPLAVTLsLAys~k------kM----mkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~ 466 (1034)
T KOG0204|consen 397 VPEGLPLAVTLSLAYSMK------KM----MKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVN 466 (1034)
T ss_pred CCCCccHHHHHHHHHHHH------HH----hcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeecccccccc
Confidence 999999999999888887 56 66778899999999999999999999999999999999999988877532
Q ss_pred chHHHHHHHhhcCCCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEE
Q 002029 241 VTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISY 320 (978)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y 320 (978)
... . ..-.+.....++.+++...+.....++..+...-
T Consensus 467 ~~~-~-----------------------------------------~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~ 504 (1034)
T KOG0204|consen 467 SPK-S-----------------------------------------SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPE 504 (1034)
T ss_pred Ccc-c-----------------------------------------ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCcc
Confidence 210 0 0012234445666777666555544444443444
Q ss_pred ecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCc
Q 002029 321 EAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGAD 400 (978)
Q Consensus 321 ~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~ 400 (978)
+.+||.|.||+.++.++|..+.. .+...++++++||+|+||||+++++.+++..++|+|||.
T Consensus 505 ~~GspTE~AlL~f~~~LG~~~~~------------------~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAs 566 (1034)
T KOG0204|consen 505 QLGSPTECALLGFGLKLGMDFQD------------------VRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGAS 566 (1034)
T ss_pred ccCCHHHHHHHHHHHHhCcchHh------------------hcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChH
Confidence 56899999999999999987754 246678899999999999999999988776239999999
Q ss_pred hHHHHHhccc----------chhhHHHHHHHHHHHHHccceeEeeEEEeCCHH--HHHHHHHHHHHHhhcccccHHHHHH
Q 002029 401 SVMFERLAEN----------GREFEEQTKEHINEYADAGLRTLILAYRELDEK--EYKQFNEEFTEAKNSVSADREELAE 468 (978)
Q Consensus 401 ~~i~~~~~~~----------~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~--e~~~~~~~~~~a~~~l~~~r~~~~~ 468 (978)
|.|+.+|+.. +++.+..+++.++.||++||||+|+|||++... +-.+|..
T Consensus 567 EiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~------------------ 628 (1034)
T KOG0204|consen 567 EIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN------------------ 628 (1034)
T ss_pred HHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccc------------------
Confidence 9999999864 345566889999999999999999999995443 1112211
Q ss_pred HHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCccccc
Q 002029 469 EIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTL 548 (978)
Q Consensus 469 ~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~ 548 (978)
.+..+.+|+++|++||+||.||||+++|+.|+.|||+|.|+|||+..||.+||.+|||++++..
T Consensus 629 --~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d-------------- 692 (1034)
T KOG0204|consen 629 --EELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD-------------- 692 (1034)
T ss_pred --cccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc--------------
Confidence 1345789999999999999999999999999999999999999999999999999999987643
Q ss_pred chhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHH
Q 002029 549 EKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKA 628 (978)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~ 628 (978)
.+.++|++++++.++++.+...++. |.+|.+|.+|.
T Consensus 693 --------------------------------------~~~lEG~eFr~~s~ee~~~i~pkl~------VlARSSP~DK~ 728 (1034)
T KOG0204|consen 693 --------------------------------------FLALEGKEFRELSQEERDKIWPKLR------VLARSSPNDKH 728 (1034)
T ss_pred --------------------------------------cceecchhhhhcCHHHHHhhhhhhe------eeecCCCchHH
Confidence 2378888888887777777777654 99999999999
Q ss_pred HHHHHHHccCCCeEEEEcCCcCCHHHhhhccccccc--cCCccchhccccceehhchhh--hHHHHHHhhhhhhhHhhHh
Q 002029 629 LVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSM 704 (978)
Q Consensus 629 ~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i--~g~e~~~a~~asD~vi~~f~~--l~~lll~~gR~~~~~i~~~ 704 (978)
.+|+.+++ .|++|+++|||.||+|||++||||.+| +|+|. ||++||++|+|++| +++. +.+||..|.+|+|+
T Consensus 729 lLVk~L~~-~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeV--AKEaSDIIi~DDNFssIVk~-v~WGR~VY~nIqKF 804 (1034)
T KOG0204|consen 729 LLVKGLIK-QGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEV--AKEASDIIILDDNFSSIVKA-VKWGRNVYDNIQKF 804 (1034)
T ss_pred HHHHHHHh-cCcEEEEecCCCCCchhhhhcccchhccccchhh--hhhhCCeEEEcCchHHHHHH-HHhhhHHHHHHHHh
Confidence 99999998 999999999999999999999999955 78888 99999999999665 8888 89999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccH
Q 002029 705 ICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSW 784 (978)
Q Consensus 705 i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~ 784 (978)
++|.+.-|++.+.+.|..+... +.+|+++.|++|.|+|+|.+.+++++.++ |+++.+.|.|. +|+.++++.
T Consensus 805 iQFQLTVNVvAliv~fv~A~~~---~dsPLtAVQlLWVNLIMDTLgALALATep--Pt~~Lm~RkP~----GR~~~LIt~ 875 (1034)
T KOG0204|consen 805 LQFQLTVNVVALIVNFVSACAT---GDSPLTAVQLLWVNLIMDTLGALALATEP--PTDELMKRKPV----GRTKPLITR 875 (1034)
T ss_pred heeEEEEEEEeehhhhhhhhhc---CCccHHHHHHHHHHHHHHHHHHHHhccCC--CChHHhcCCCC----CCCCcchHH
Confidence 9999999999998988887776 67889999999999999999999999864 67777778887 999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcee-hhhHHHHHHHHHHHHHHHHHHHHhhcchh-------hHHHHH
Q 002029 785 TRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVI-GLEILGTTMYTCVVWVVNCQMALSVTYFT-------YIQHLF 856 (978)
Q Consensus 785 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~f~~~v~~~~~~~~~~~~~~~-------~~~~~~ 856 (978)
.||..++.+++||-+++|.+.+.... .++.+++.. ......|++|.++|+.+.|.-+. .|... .+.+..
T Consensus 876 tMwknil~qa~YQl~vl~iL~F~G~~--if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEin-aRki~~~NvFkgi~~N~~ 952 (1034)
T KOG0204|consen 876 TMWKNILGQAVYQLIVLFILNFAGKS--IFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEIN-ARKIDERNVFKGIFRNRL 952 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchh--hhccCCCCCCchhhheeeehhHHHHHHHHHHHh-hcchhHHhHHHHHhcCce
Confidence 99999999999999999988876532 333344332 23456688999988876665432 22211 223444
Q ss_pred HHHHHHHHHHHHHHHhccCccccchhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHH
Q 002029 857 IWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAI 917 (978)
Q Consensus 857 i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~ 917 (978)
+...+...++++.++..+.. . ++++.++++..|+.++++.++.++.-.+.|.+
T Consensus 953 F~~ii~~T~v~QviIveF~g---~-----~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 953 FCVIITITVVSQVIIVEFGG---A-----FFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred EEEEeeeeeehhhhhhhhcC---c-----ceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 44455566777776665543 2 56688999999999999999998888887765
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-91 Score=872.67 Aligned_cols=748 Identities=18% Similarity=0.216 Sum_probs=543.4
Q ss_pred CceeecCceeccCCeEEEEEEEeCccchhccccC---CC-----------C------------------------CCcCH
Q 002029 42 QQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNST---GP-----------P------------------------SKRSK 83 (978)
Q Consensus 42 ~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~~~---~~-----------~------------------------~k~s~ 83 (978)
.|++|+||.|.+ |.+.|+|++||.+|++++... .. + ..+||
T Consensus 196 ~n~lf~GT~V~~-G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tp 274 (1053)
T TIGR01523 196 INLAFSSSAVTK-GRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTP 274 (1053)
T ss_pred CCccccCceEEe-eeEEEEEEEecCccHHHHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCc
Confidence 489999999997 999999999999996643321 11 0 01499
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccc
Q 002029 84 VERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPI 163 (978)
Q Consensus 84 l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~ 163 (978)
+|+++++++.+++.+.++++++.++...+ . .| ...++.++++++++||+
T Consensus 275 Lq~~l~~l~~~l~~i~~~~~~~~~~~~~~----~-------~~--------------------~~~~~~av~l~Va~VPe 323 (1053)
T TIGR01523 275 LHRKLSKLAVILFCIAIIFAIIVMAAHKF----D-------VD--------------------KEVAIYAICLAISIIPE 323 (1053)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhh----h-------hh--------------------HHHHHHHHHHHHHHccc
Confidence 99999999999888888777766543211 0 00 12566788999999999
Q ss_pred hhhhhHHHHHHHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCe-eeCCCch
Q 002029 164 SLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGT-SYGRGVT 242 (978)
Q Consensus 164 sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~-~y~~~~~ 242 (978)
+||++++++.++++. +| +++++++|+++++|+||++++||+|||||||+|+|+|+++++++. .|.....
T Consensus 324 gLp~~vti~La~g~~------rM----ak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~ 393 (1053)
T TIGR01523 324 SLIAVLSITMAMGAA------NM----SKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNS 393 (1053)
T ss_pred chHHHHHHHHHHHHH------HH----HhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCC
Confidence 999999999999999 77 889999999999999999999999999999999999999998752 2211000
Q ss_pred HHHHHHHhhcCCCCccchhhhhhcccccCCcccCchhhhcC-----CCCC---CCChHHHHHHHHHHhhhcceeccccCC
Q 002029 243 EVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNG-----SWVN---EPHADVIQKFLRLLAICHTALPEVDEE 314 (978)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~---~~~~~~~~~~~~~lalC~~~~~~~~~~ 314 (978)
..... ...+.... ..+ ............+.++... .... ...++..++++.+.++||++....++.
T Consensus 394 ~~~~~--~~~g~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~ 467 (1053)
T TIGR01523 394 DDAFN--PNEGNVSG-IPR---FSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDA 467 (1053)
T ss_pred CCCCC--Cccccccc-ccc---cccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCC
Confidence 00000 00000000 000 0000000000000000000 0000 002245677999999999987654322
Q ss_pred CCcEEEecCCccHHHHHHHHHHcCCEEEee-c--------C-ceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEE
Q 002029 315 NGKISYEAESPDEAAFVIAARELGFEFYER-T--------Q-TSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVI 384 (978)
Q Consensus 315 ~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r-~--------~-~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsvi 384 (978)
.+... ..+||+|.||+++|.+.|+..... + + ....+..... ++....|+++.++||||+|||||++
T Consensus 468 ~~~~~-~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~pFds~rK~msvv 543 (1053)
T TIGR01523 468 TDCWK-AHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNE---KPGSAQFEFIAEFPFDSEIKRMASI 543 (1053)
T ss_pred CCcee-eCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccc---cccccccceEEEeccCCCCCeEEEE
Confidence 22222 347999999999999999742100 0 0 0000110000 0113568999999999999999999
Q ss_pred EEeCCC-eEEEEEeCCchHHHHHhccc-----------chhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHH
Q 002029 385 VRSEEG-TLLLLSKGADSVMFERLAEN-----------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEF 452 (978)
Q Consensus 385 v~~~~~-~~~l~~KGa~~~i~~~~~~~-----------~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~ 452 (978)
++++++ ++++|+|||||.|+++|+.. +++.++.+.+++++|+++|+|||++|||.++++++..+ .+
T Consensus 544 ~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~ 621 (1053)
T TIGR01523 544 YEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QL 621 (1053)
T ss_pred EEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hh
Confidence 997644 58999999999999999742 22346778889999999999999999999987654221 11
Q ss_pred HHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccC
Q 002029 453 TEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQG 532 (978)
Q Consensus 453 ~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~ 532 (978)
.+ .. .+ .+.+|+||+|+|+++++||+|++++++|+.|++|||++||+|||+..||.+||++|||+.++
T Consensus 622 ~~---~~-~~--------~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~ 689 (1053)
T TIGR01523 622 KN---ET-LN--------RATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPN 689 (1053)
T ss_pred hc---cc-cc--------hhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcc
Confidence 00 00 01 24578999999999999999999999999999999999999999999999999999998643
Q ss_pred ceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHh
Q 002029 533 MRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAI 612 (978)
Q Consensus 533 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~ 612 (978)
... ... ......+++|.+++.+.++++.+...
T Consensus 690 ~~~---~~~-----------------------------------------~~~~~~vitG~~l~~l~~~~l~~~~~---- 721 (1053)
T TIGR01523 690 FIH---DRD-----------------------------------------EIMDSMVMTGSQFDALSDEEVDDLKA---- 721 (1053)
T ss_pred ccc---ccc-----------------------------------------ccccceeeehHHhhhcCHHHHHHHhh----
Confidence 110 000 00113599999998877666554332
Q ss_pred ccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhcccccccc--CCccchhccccceehhc--hhhhHH
Q 002029 613 GCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDIAIAQ--FRFLER 688 (978)
Q Consensus 613 ~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~--g~e~~~a~~asD~vi~~--f~~l~~ 688 (978)
...||||++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+|+ |++. |+++||+++.+ |+.+.+
T Consensus 722 --~~~V~ar~sP~~K~~iV~~lq~-~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v--ak~aADivl~dd~f~~I~~ 796 (1053)
T TIGR01523 722 --LCLVIARCAPQTKVKMIEALHR-RKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV--AKDASDIVLSDDNFASILN 796 (1053)
T ss_pred --cCeEEEecCHHHHHHHHHHHHh-cCCeeEEeCCCcchHHHHHhCCccEecCCCccHH--HHHhcCEEEecCCHHHHHH
Confidence 3469999999999999999998 8999999999999999999999999873 5565 89999999998 777999
Q ss_pred HHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhcccccc--chhhHHHHHHHHHHhhhhHhhhhccccCCChHHh
Q 002029 689 LLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQP--VYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFC 766 (978)
Q Consensus 689 lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~--~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~ 766 (978)
+ +.|||++|+|+++++.|.+++|+..+++.+++.++..++|.+ +++++|++|+|++++.+|++++++++ ++++.+
T Consensus 797 ~-i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~--~~~~~m 873 (1053)
T TIGR01523 797 A-IEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEK--AAPDLM 873 (1053)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCC--CChhHH
Confidence 9 899999999999999999999999999999999988777764 58899999999999999999999853 556666
Q ss_pred hhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcc---cccc-----CCCce-ehhhHHHHHHHHHHHHH
Q 002029 767 LKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQ---QAFR-----KGGEV-IGLEILGTTMYTCVVWV 837 (978)
Q Consensus 767 ~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~---~~~~-----~~g~~-~~~~~~~~~~f~~~v~~ 837 (978)
.++|+ .+..+++++.+++.+++.|++++++++..+++.+.. .... ..+.. .+.....|++|+++++.
T Consensus 874 ~~~Pr----~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~ 949 (1053)
T TIGR01523 874 DRLPH----DNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFC 949 (1053)
T ss_pred hcCCC----CCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHH
Confidence 66665 566789999999999999999998887666543221 0000 00000 12334578888888887
Q ss_pred HHHHHHHhhcc-----hh-----------------hHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhcCChH
Q 002029 838 VNCQMALSVTY-----FT-----------------YIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPS 895 (978)
Q Consensus 838 ~~~~~~~~~~~-----~~-----------------~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~ 895 (978)
+.++.+ ..++ |. .+.|.++++++++.++++++..++|+. +.. +|+..+.++
T Consensus 950 ~~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~-~~~----~f~~~~l~~- 1022 (1053)
T TIGR01523 950 ALILAV-EVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVI-NDD----VFKHKPIGA- 1022 (1053)
T ss_pred HHHHHH-HHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhh-hhh----hhccCCcch-
Confidence 766653 2222 11 236778889999999999999999853 321 556777775
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 002029 896 FWLITLLVLMSSLLPYFTYSAIQMRFF 922 (978)
Q Consensus 896 ~wl~il~~~~~~ll~~~~~k~~~r~~~ 922 (978)
.|+.++.++++.++.+++.|+++|++.
T Consensus 1023 ~w~~~~~~~~~~~~~~e~~K~~~r~~~ 1049 (1053)
T TIGR01523 1023 EWGLAAAATIAFFFGAEIWKCGKRRLF 1049 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 899999999999999999999987653
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-91 Score=869.12 Aligned_cols=726 Identities=21% Similarity=0.234 Sum_probs=547.9
Q ss_pred CceeecCceeccCCeEEEEEEEeCccchhcc---ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hccc
Q 002029 42 QQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ---NSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIA-TRED 117 (978)
Q Consensus 42 ~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~---~~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~-~~~~ 117 (978)
+|++|+||.+.+ |++.|+|++||.+|++++ +...++.++||+|+++++++..++.+.++++++.+++...+ ....
T Consensus 149 ~n~l~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~ 227 (917)
T TIGR01116 149 KNMLFSGTLVVA-GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPA 227 (917)
T ss_pred cceeeeCCEEec-ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 399999999998 999999999999997754 55667788999999999999999887777777665543221 1000
Q ss_pred cccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccccCCCcccc
Q 002029 118 LQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARA 197 (978)
Q Consensus 118 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~ 197 (978)
.. ..| .......+..++++++++||++||++++++.++++. +| +++++++
T Consensus 228 ~~----~~~----------------~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~------~m----~~~~ilv 277 (917)
T TIGR01116 228 LG----GGW----------------IQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTR------KM----AKKNAIV 277 (917)
T ss_pred cc----chh----------------HHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHH------HH----HHCCcEe
Confidence 00 011 122344566788999999999999999999999998 66 7889999
Q ss_pred cCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcccccCCcccCc
Q 002029 198 RTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFED 277 (978)
Q Consensus 198 r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (978)
|+++++|+||++++||||||||||+|+|+|.+++..+..+... ... ...+..+..
T Consensus 278 k~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~-~~~------------------------~~~~~~~~~ 332 (917)
T TIGR01116 278 RKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL-NEF------------------------CVTGTTYAP 332 (917)
T ss_pred cCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc-ceE------------------------EecCCccCC
Confidence 9999999999999999999999999999999998765432100 000 000000000
Q ss_pred --hhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecC
Q 002029 278 --ERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELD 355 (978)
Q Consensus 278 --~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~ 355 (978)
..+.+.........+..+++++++++||++.+..++.++... ..+||+|.||++++.+.|+....+..+.+.....+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~-~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~ 411 (917)
T TIGR01116 333 EGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYE-KVGEATEAALKVLVEKMGLPATKNGVSSKRRPALG 411 (917)
T ss_pred CccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCcee-eccChhHHHHHHHHHHcCCCchhcccccccccccc
Confidence 000000000111234567889999999998775433322222 14799999999999999987765544333322211
Q ss_pred CCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhccc----------chhhHHHHHHHHHHH
Q 002029 356 PVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN----------GREFEEQTKEHINEY 425 (978)
Q Consensus 356 ~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~l~~~ 425 (978)
.. ...+..|++++.+||||+||||||+++. ++++++|+|||||.|+++|+.. +++.++++.+++++|
T Consensus 412 ~~--~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~ 488 (917)
T TIGR01116 412 CN--SVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEM 488 (917)
T ss_pred hh--HHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHH
Confidence 10 0113568899999999999999999996 4678999999999999999742 134567788999999
Q ss_pred HH-ccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHc
Q 002029 426 AD-AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQA 504 (978)
Q Consensus 426 a~-~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~a 504 (978)
++ +|+|||++|||.+++++.. +. . .+ ....+.+|+||+|+|+++++||+|++++++|+.|++|
T Consensus 489 a~~~GlRvl~~A~k~~~~~~~~-~~---------~-~~-----~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~a 552 (917)
T TIGR01116 489 GTTKALRCLALAFKDIPDPREE-DL---------L-SD-----PANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTA 552 (917)
T ss_pred HhhcCCeEEEEEEEECCccccc-cc---------c-cc-----chhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHC
Confidence 99 9999999999999764321 00 0 01 1123568999999999999999999999999999999
Q ss_pred CCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCC
Q 002029 505 GIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLG 584 (978)
Q Consensus 505 GIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (978)
||++||+|||+.+||.++|+++|+..++...
T Consensus 553 GI~v~miTGD~~~tA~~ia~~~gi~~~~~~v------------------------------------------------- 583 (917)
T TIGR01116 553 GIRVIMITGDNKETAEAICRRIGIFSPDEDV------------------------------------------------- 583 (917)
T ss_pred CCEEEEecCCCHHHHHHHHHHcCCCCCCccc-------------------------------------------------
Confidence 9999999999999999999999997644221
Q ss_pred CeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhccccccc
Q 002029 585 PLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGI 664 (978)
Q Consensus 585 ~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i 664 (978)
....++|++++.+.+++... ..++.+||||++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+|
T Consensus 584 -~~~~~~g~~l~~~~~~~~~~------~~~~~~v~ar~~P~~K~~iV~~lq~-~g~~va~iGDG~ND~~alk~AdVGia~ 655 (917)
T TIGR01116 584 -TFKSFTGREFDEMGPAKQRA------ACRSAVLFSRVEPSHKSELVELLQE-QGEIVAMTGDGVNDAPALKKADIGIAM 655 (917)
T ss_pred -cceeeeHHHHhhCCHHHHHH------hhhcCeEEEecCHHHHHHHHHHHHh-cCCeEEEecCCcchHHHHHhCCeeEEC
Confidence 01256666665544433222 2245679999999999999999997 899999999999999999999999999
Q ss_pred -cCCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHH
Q 002029 665 -SGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSL 741 (978)
Q Consensus 665 -~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 741 (978)
+|++. |+++||+++.+ |+.+.++ +.|||++|+|+++++.|.+++|+..+++.+++.++. ...+++++|++|
T Consensus 656 g~g~~~--ak~aAD~vl~dd~f~~i~~~-i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qll~ 729 (917)
T TIGR01116 656 GSGTEV--AKEASDMVLADDNFATIVAA-VEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALG---IPEGLIPVQLLW 729 (917)
T ss_pred CCCcHH--HHHhcCeEEccCCHHHHHHH-HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHc---CCchHHHHHHHH
Confidence 44444 88999999998 8889999 799999999999999999999999999999987763 235799999999
Q ss_pred HHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-cC----
Q 002029 742 YNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAF-RK---- 816 (978)
Q Consensus 742 ~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~---- 816 (978)
+|++++.+|++++++++ ++++.+.++|+ .++++++++++++.|++.|+++++++++.+++.+....+ ..
T Consensus 730 inli~d~lp~~~l~~~~--~~~~~m~~pP~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 803 (917)
T TIGR01116 730 VNLVTDGLPATALGFNP--PDKDIMWKPPR----RPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDS 803 (917)
T ss_pred HHHHHHHHHHHHHhcCC--cchhHhcCCCC----CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccc
Confidence 99999999999999865 44666666665 567889999999999999999998876655543321011 00
Q ss_pred -------CCce----ehhhHHHHHHHHHHHHHHHHHHHHhhcc--hh-----hHHHHHHHHHHHHHHHHHHHHhccCccc
Q 002029 817 -------GGEV----IGLEILGTTMYTCVVWVVNCQMALSVTY--FT-----YIQHLFIWGGITFWYIFLLAYGAMDPYI 878 (978)
Q Consensus 817 -------~g~~----~~~~~~~~~~f~~~v~~~~~~~~~~~~~--~~-----~~~~~~i~~si~~~~i~~~i~~~i~~~~ 878 (978)
++.. .+.....|++|+++++.+.++.+. .|+ .+ .+.|.++|+++++.+++++++.++|. +
T Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~-~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~v~~-~ 881 (917)
T TIGR01116 804 FTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALN-ALSEDQSLLRMPPWVNKWLIGAICLSMALHFLILYVPF-L 881 (917)
T ss_pred cccccccccccccccccccchHHHHHHHHHHHHHHHHHH-HcCCcccccccCCccCHHHHHHHHHHHHHHHHHHHhHH-H
Confidence 1100 012345689999998888777643 222 11 23567888888888888888888884 3
Q ss_pred cchhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002029 879 STTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQM 919 (978)
Q Consensus 879 ~~~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~~r 919 (978)
+. +|+..+.++..|+.+++++++.++.+++.|+++|
T Consensus 882 ~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 882 SR-----IFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HH-----HhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44 6778899999999999999999999999998764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-89 Score=852.96 Aligned_cols=717 Identities=19% Similarity=0.207 Sum_probs=544.9
Q ss_pred CceeecCceeccCCeEEEEEEEeCccchhccccC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 002029 42 QQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNST---GPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDL 118 (978)
Q Consensus 42 ~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~~~---~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~ 118 (978)
+|++|+||.+.+ |++.|+|++||.+|+++++.. ..+.+++|+++.+++++..+..+.++++++.++++.+ .+.
T Consensus 214 ~n~l~~Gt~v~~-G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-- 289 (997)
T TIGR01106 214 RNIAFFSTNCVE-GTARGIVVNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLI-LGY-- 289 (997)
T ss_pred CCeEEeccEeee-eeEEEEEEEccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcC--
Confidence 479999999997 999999999999998865543 5566789999999999999888877777665544322 111
Q ss_pred ccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccccCCCccccc
Q 002029 119 QDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARAR 198 (978)
Q Consensus 119 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r 198 (978)
.| ...+..++++++.+||++||++++++.+.++. +| +++++++|
T Consensus 290 ------~~--------------------~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~------~m----~~~~ilvk 333 (997)
T TIGR01106 290 ------TW--------------------LEAVIFLIGIIVANVPEGLLATVTVCLTLTAK------RM----ARKNCLVK 333 (997)
T ss_pred ------CH--------------------HHHHHHHHHHHhhcCCccchHHHHHHHHHHHH------HH----HHCCcEec
Confidence 12 12566778888899999999999999999988 56 78899999
Q ss_pred CcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcccccCCcccCch
Q 002029 199 TSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDE 278 (978)
Q Consensus 199 ~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (978)
+++++|+||++++||||||||||+|+|+|+++++++..|..+.... ..+.
T Consensus 334 ~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~-------------------------~~~~----- 383 (997)
T TIGR01106 334 NLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTED-------------------------QSGV----- 383 (997)
T ss_pred CcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccC-------------------------CCCc-----
Confidence 9999999999999999999999999999999999887764321000 0000
Q ss_pred hhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCC--CcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCC
Q 002029 279 RIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEEN--GKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDP 356 (978)
Q Consensus 279 ~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~--~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~ 356 (978)
..+......+.++.++++||++.+..+... ..-.+..+||+|.||++++...+.....
T Consensus 384 -------~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~------------- 443 (997)
T TIGR01106 384 -------SFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVME------------- 443 (997)
T ss_pred -------cCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHH-------------
Confidence 000122345678899999999876533211 0112456899999999999865432110
Q ss_pred CCCccceeEeeEeEeecCCCCCceEEEEEEeC---CCeEEEEEeCCchHHHHHhccc---------chhhHHHHHHHHHH
Q 002029 357 VTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE---EGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINE 424 (978)
Q Consensus 357 ~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~ 424 (978)
.+..|+++..+||||+||||+++++.. ++++++|+|||||.|+++|+.. +++.++.+.+.+++
T Consensus 444 -----~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~ 518 (997)
T TIGR01106 444 -----MRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLE 518 (997)
T ss_pred -----HHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHH
Confidence 135688899999999999999988643 3568999999999999999741 23456778888999
Q ss_pred HHHccceeEeeEEEeCCHHHHHH-HHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHH
Q 002029 425 YADAGLRTLILAYRELDEKEYKQ-FNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 503 (978)
Q Consensus 425 ~a~~Glr~l~~A~r~l~~~e~~~-~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~ 503 (978)
|+++|+|||++|||.++++++++ |.. +++ ..+.+|+||+|+|+++++||+|++|+++|++|++
T Consensus 519 ~a~~GlRvla~A~k~l~~~~~~~~~~~-----------~~~-----~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~ 582 (997)
T TIGR01106 519 LGGLGERVLGFCHLYLPDEQFPEGFQF-----------DTD-----DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRS 582 (997)
T ss_pred HHhcCCEEEEEEEeecCcccccccccc-----------cch-----hhhccccCcEEEEEEeccCCChHHHHHHHHHHHH
Confidence 99999999999999998765432 110 111 1134589999999999999999999999999999
Q ss_pred cCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCC
Q 002029 504 AGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESL 583 (978)
Q Consensus 504 aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (978)
+||+++|+|||+..||.++|+++|++.++.... ++ + . .+.....+.. ++.
T Consensus 583 ~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~----~~-----i---------~--------~~~~~~~~~~----~~~ 632 (997)
T TIGR01106 583 AGIKVIMVTGDHPITAKAIAKGVGIISEGNETV----ED-----I---------A--------ARLNIPVSQV----NPR 632 (997)
T ss_pred CCCeEEEECCCCHHHHHHHHHHcCCCCCCccch----hh-----h---------h--------hhcccccccc----ccc
Confidence 999999999999999999999999987653210 00 0 0 0000000000 011
Q ss_pred CCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhcccccc
Q 002029 584 GPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVG 663 (978)
Q Consensus 584 ~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~ 663 (978)
....++++|++++.+.++++.+ +...++.+||||++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+
T Consensus 633 ~~~~~vi~G~~l~~l~~~el~~----~~~~~~~~VfaR~sPeqK~~IV~~lq~-~g~vv~~~GDG~ND~paLk~AdVGia 707 (997)
T TIGR01106 633 DAKACVVHGSDLKDMTSEQLDE----ILKYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVA 707 (997)
T ss_pred cccceEEEhHHhhhCCHHHHHH----HHHhcCCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHhhCCccee
Confidence 1234799999999887765443 444556679999999999999999998 89999999999999999999999997
Q ss_pred c--cCCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHH
Q 002029 664 I--SGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFL 739 (978)
Q Consensus 664 i--~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~ 739 (978)
| +|++. |+++||+++.| |+.+.++ +.|||++|.|+++++.|.+++|+..+++.+++.++. +..+++++|+
T Consensus 708 mg~~G~~v--ak~aADivL~dd~f~~Iv~a-i~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~ql 781 (997)
T TIGR01106 708 MGIAGSDV--SKQAADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIAN---IPLPLGTITI 781 (997)
T ss_pred cCCcccHH--HHHhhceEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHc---CcchhHHHHH
Confidence 7 46676 89999999999 7779998 899999999999999999999999999999998875 3346889999
Q ss_pred HHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHH-HHHHHHHHHHHHHHHHhhcccc-----
Q 002029 740 SLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWA-LNGVANAAIIFFFCIHAMKQQA----- 813 (978)
Q Consensus 740 ~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~----- 813 (978)
+|+|++++++|+++++.++ ++++.+.++|+ ..+..+++++++++.|+ ..|++++++.|+.+++.+...+
T Consensus 782 L~inli~d~lp~~al~~e~--~~~~~m~~~P~---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~ 856 (997)
T TIGR01106 782 LCIDLGTDMVPAISLAYEK--AESDIMKRQPR---NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLH 856 (997)
T ss_pred HHHHHHHHHHHHHHHhcCC--CCcccccCCCc---CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccc
Confidence 9999999999999999853 66677777887 23467899998887765 4599999888877665432111
Q ss_pred -ccC---------CCc--ee-----------hhhHHHHHHHHHHHHHHHHHHHH-hhcchhh----HHHHHHHHHHHHHH
Q 002029 814 -FRK---------GGE--VI-----------GLEILGTTMYTCVVWVVNCQMAL-SVTYFTY----IQHLFIWGGITFWY 865 (978)
Q Consensus 814 -~~~---------~g~--~~-----------~~~~~~~~~f~~~v~~~~~~~~~-~~~~~~~----~~~~~i~~si~~~~ 865 (978)
+.. ++. .. ....+.|++|+++++.+.+.... ++...+. +.+..++.++++.+
T Consensus 857 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~ 936 (997)
T TIGR01106 857 LVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEET 936 (997)
T ss_pred ccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHH
Confidence 000 000 00 00146789999998888777653 2222121 45677777888778
Q ss_pred HHHHHHhccCccccchhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002029 866 IFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRF 921 (978)
Q Consensus 866 i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~~r~~ 921 (978)
+++++..++|+ ++. +|+..+.++..|+.+++++++.++..++.|+++|++
T Consensus 937 ~l~~~~~~~p~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 937 ALAAFLSYCPG-MGV-----ALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHhhh-hHH-----HhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 78877788874 344 677888999999999999999999999999988764
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-87 Score=836.38 Aligned_cols=697 Identities=21% Similarity=0.269 Sum_probs=530.3
Q ss_pred eEE-EEEEC-----CccccC----CcCceeecCceeccCCeEEEEEEEeCccchh---ccccCCCCCCcCHHHHHHHHHH
Q 002029 26 FVG-SLELE-----EQQYPL----TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKII 92 (978)
Q Consensus 26 f~G-~~~~~-----~~~~pl----~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~ 92 (978)
.+| .+.+| ||+.|+ +.+|++|+||.+.+ |.+.|+|++||.+|.+ ..+...++ +++|+++.++++.
T Consensus 205 i~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~-G~~~~iV~~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~ 282 (941)
T TIGR01517 205 ISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNE-GSGRMLVTAVGVNSFGGKLMMELRAEG-EDTPLQEKLSELA 282 (941)
T ss_pred EEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEe-eEEEEEEEEeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHH
Confidence 356 55554 899987 34688999999997 9999999999999954 44444444 4579999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhh-hccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHH
Q 002029 93 YFLFGILVLMSFIGSIFFGIA-TREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEI 171 (978)
Q Consensus 93 ~~~~~~~~~~~~i~~i~~~~~-~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~ 171 (978)
..+..+.++++++.++++.+. .... .|.-.. .+......+...+.+++++++++||++||+++++
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~-------~~~~~~-------~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti 348 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRI-------IRGDGR-------DTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTI 348 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh-------cccccc-------ccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHH
Confidence 998887777766665544221 1000 000000 0000112345578889999999999999999999
Q ss_pred HHHHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhh
Q 002029 172 VKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARR 251 (978)
Q Consensus 172 ~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~ 251 (978)
+...++. +| +++++++|+++++|+||++++||||||||||+|+|++++++.++..++.+..
T Consensus 349 ~l~~~~~------~m----ak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~--------- 409 (941)
T TIGR01517 349 ALAYSMK------KM----MKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDV--------- 409 (941)
T ss_pred HHHHHHH------HH----HhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcc---------
Confidence 9888877 67 8899999999999999999999999999999999999999876654432100
Q ss_pred cCCCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHH
Q 002029 252 KGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFV 331 (978)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv 331 (978)
.. ..++...+++...++||+..+...++.+ ..+..+||+|.||+
T Consensus 410 -----------------------------~~------~~~~~~~~~l~~~~~~~s~~~~~~~~~~-~~~~~g~p~e~All 453 (941)
T TIGR01517 410 -----------------------------LR------NVPKHVRNILVEGISLNSSSEEVVDRGG-KRAFIGSKTECALL 453 (941)
T ss_pred -----------------------------cc------cCCHHHHHHHHHHHHhCCCCccccCCCC-ccccCCCccHHHHH
Confidence 00 0012234455555556555443211111 12456899999999
Q ss_pred HHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhccc-
Q 002029 332 IAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN- 410 (978)
Q Consensus 332 ~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~- 410 (978)
+++++.|..... .+..|++++.+||+|+||||+++++.+++++++++|||||.|+++|+..
T Consensus 454 ~~~~~~~~~~~~------------------~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~ 515 (941)
T TIGR01517 454 GFLLLLGRDYQE------------------VRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRL 515 (941)
T ss_pred HHHHHcCCCHHH------------------HHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHh
Confidence 999987743211 1245778899999999999999999877889999999999999999752
Q ss_pred ---ch-----hhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEE
Q 002029 411 ---GR-----EFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLG 482 (978)
Q Consensus 411 ---~~-----~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG 482 (978)
+. +.++++.+.+++++.+|+||+++|||.++.+++..| +..|+||+|+|
T Consensus 516 ~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~-----------------------~~~e~~l~~lG 572 (941)
T TIGR01517 516 DSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRK-----------------------DYPNGGLTLIG 572 (941)
T ss_pred hcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccc-----------------------cccccCcEEEE
Confidence 11 135678889999999999999999999876543221 23478999999
Q ss_pred EEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHH
Q 002029 483 ATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALK 562 (978)
Q Consensus 483 ~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 562 (978)
+++++||+|++++++|++|+++||++||+|||+..||.+||++|||..++.
T Consensus 573 li~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~----------------------------- 623 (941)
T TIGR01517 573 VVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG----------------------------- 623 (941)
T ss_pred EeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCc-----------------------------
Confidence 999999999999999999999999999999999999999999999976432
Q ss_pred HHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeE
Q 002029 563 ASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTT 642 (978)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v 642 (978)
.+++|++++.+.++++.+... +..||||++|+||.++|+.+|+ .|++|
T Consensus 624 -------------------------~vi~G~~~~~l~~~el~~~i~------~~~Vfar~sPe~K~~iV~~lq~-~g~vV 671 (941)
T TIGR01517 624 -------------------------LAMEGKEFRRLVYEEMDPILP------KLRVLARSSPLDKQLLVLMLKD-MGEVV 671 (941)
T ss_pred -------------------------eEeeHHHhhhCCHHHHHHHhc------cCeEEEECCHHHHHHHHHHHHH-CCCEE
Confidence 277788777766655555433 4469999999999999999998 89999
Q ss_pred EEEcCCcCCHHHhhhcccccccc--CCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHH
Q 002029 643 LAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFT 718 (978)
Q Consensus 643 ~aiGDG~ND~~ml~~AdvGI~i~--g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~ 718 (978)
+|+|||+||+|||++|||||+|+ |++. |+++||+++.+ |+.+.++ +.|||++|+|+++++.|.+++|+..+++
T Consensus 672 am~GDGvNDapALk~AdVGIAmg~~gtdv--Ak~aADivL~dd~f~~I~~~-i~~gR~~~~ni~k~i~~~l~~n~~~i~~ 748 (941)
T TIGR01517 672 AVTGDGTNDAPALKLADVGFSMGISGTEV--AKEASDIILLDDNFASIVRA-VKWGRNVYDNIRKFLQFQLTVNVVAVIL 748 (941)
T ss_pred EEECCCCchHHHHHhCCcceecCCCccHH--HHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999884 5666 89999999995 7779999 7999999999999999999999999999
Q ss_pred HHHHHHhhccccccchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHH
Q 002029 719 LFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANA 798 (978)
Q Consensus 719 ~~~~~~~~~~s~~~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s 798 (978)
.+++.++. +.++++++|++|+|++++++|+++++.+ ++++.++++|+. .+..++++..++..|++.|++++
T Consensus 749 ~~~~~~~~---~~~pl~~~qil~inl~~d~~~al~l~~e---~~~~~lm~~~P~---~~~~~li~~~~~~~i~~~~~~~~ 819 (941)
T TIGR01517 749 TFVGSCIS---STSPLTAVQLLWVNLIMDTLAALALATE---PPTEALLDRKPI---GRNAPLISRSMWKNILGQAGYQL 819 (941)
T ss_pred HHHHHHHh---ccccHHHHHHHHHHHHHHHhhHHHHccC---CccHHHHhCCCC---CCCCCcCCHHHHHHHHHHHHHHH
Confidence 88887775 4457999999999999999999999864 344455555542 56678899999999999999999
Q ss_pred HHHHHHHHHhhccccccCCC----ceehhhHHHHHHHHHHHHHHHHHHHHh-hcc----h-hhHHHHHHHHHHHHHHHHH
Q 002029 799 AIIFFFCIHAMKQQAFRKGG----EVIGLEILGTTMYTCVVWVVNCQMALS-VTY----F-TYIQHLFIWGGITFWYIFL 868 (978)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~f~~~v~~~~~~~~~~-~~~----~-~~~~~~~i~~si~~~~i~~ 868 (978)
++.|+++++... .+...+ .........|++|.++++.+.++.+.. +.+ | .++.|.++|.++++.++++
T Consensus 820 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~ 897 (941)
T TIGR01517 820 VVTFILLFAGGS--IFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQ 897 (941)
T ss_pred HHHHHHHHHHHh--hhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHH
Confidence 988877654321 111111 000123456888988888877776432 111 1 2346677777777777777
Q ss_pred HHHhccCccccchhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHH
Q 002029 869 LAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAI 917 (978)
Q Consensus 869 ~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~ 917 (978)
+++..+ ++. +|+..+.++..|+.+++++++.++..++.|++
T Consensus 898 ~~~~~~---~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 898 VIIVEF---GGS-----FFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HHHHHH---HHH-----HhcccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 655532 232 66788899999999999998888888888775
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-83 Score=797.25 Aligned_cols=663 Identities=19% Similarity=0.223 Sum_probs=519.3
Q ss_pred ceeecCceeccCCeEEEEEEEeCccchhcc---ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 002029 43 QLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ---NSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQ 119 (978)
Q Consensus 43 n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~---~~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~ 119 (978)
|++|+||.+.+ |.+.++|++||.+|.+++ ....+...++|+++.++++..++.++.++++++.+++. ++.+.
T Consensus 195 n~v~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~-~~~~~--- 269 (884)
T TIGR01522 195 NIAFMGTLVRC-GHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVG-WFQGK--- 269 (884)
T ss_pred ceEEeCCEEEe-eeEEEEEEEecCccHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcC---
Confidence 69999999997 999999999999996643 34455566799999999999988776655554443332 12111
Q ss_pred cccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccccCCCcccccC
Q 002029 120 DGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARART 199 (978)
Q Consensus 120 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~ 199 (978)
.| ...+..++++++.+||++||++++++...++. +| +++++++|+
T Consensus 270 -----~~--------------------~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~------r~----ak~~ilvk~ 314 (884)
T TIGR01522 270 -----DW--------------------LEMFTISVSLAVAAIPEGLPIIVTVTLALGVL------RM----SKKRAIVRK 314 (884)
T ss_pred -----CH--------------------HHHHHHHHHHHHHHccchHHHHHHHHHHHHHH------HH----hhcCCcccc
Confidence 12 22677888999999999999999999988887 67 899999999
Q ss_pred cccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCC-CchHHHHHHHhhcCCCCccchhhhhhcccccCCcccCch
Q 002029 200 SNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGR-GVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDE 278 (978)
Q Consensus 200 ~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (978)
++++|+||++++||||||||||+|+|++.+++..+..+.. +... .+ .......+++
T Consensus 315 ~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~------------~~-----------~~~~~~~~~~ 371 (884)
T TIGR01522 315 LPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVS------------LN-----------QFGEVIVDGD 371 (884)
T ss_pred hHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCc------------cC-----------CCCccccccc
Confidence 9999999999999999999999999999999876543210 0000 00 0000000000
Q ss_pred hhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCC
Q 002029 279 RIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVT 358 (978)
Q Consensus 279 ~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~ 358 (978)
......++...+++.+.++||+...+..+ +. ..+||+|.||++++++.|+...
T Consensus 372 ------~~~~~~~~~~~~~l~~~~l~~~~~~~~~~--~~---~~g~p~e~All~~~~~~~~~~~---------------- 424 (884)
T TIGR01522 372 ------VLHGFYTVAVSRILEAGNLCNNAKFRNEA--DT---LLGNPTDVALIELLMKFGLDDL---------------- 424 (884)
T ss_pred ------ccccccCHHHHHHHHHHhhhCCCeecCCC--CC---cCCChHHHHHHHHHHHcCcHhH----------------
Confidence 00111234567888899999998654322 11 1369999999999998876311
Q ss_pred CccceeEeeEeEeecCCCCCceEEEEEEeC-CCeEEEEEeCCchHHHHHhccc----------chhhHHHHHHHHHHHHH
Q 002029 359 GTKVERSYSLLNVLEFSSSRKRMSVIVRSE-EGTLLLLSKGADSVMFERLAEN----------GREFEEQTKEHINEYAD 427 (978)
Q Consensus 359 ~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~l~~~a~ 427 (978)
+..|+.+..+||+|+||||+++++.+ ++++++|+|||||.|+++|+.. +++.++++.+++++++.
T Consensus 425 ----~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~ 500 (884)
T TIGR01522 425 ----RETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMAS 500 (884)
T ss_pred ----HhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHh
Confidence 24578889999999999999999874 5678999999999999999742 12345677888999999
Q ss_pred ccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcCCe
Q 002029 428 AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIK 507 (978)
Q Consensus 428 ~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIk 507 (978)
+|+||+++|||.+ ++||+|+|+++++||+|++++++|+.|+++||+
T Consensus 501 ~G~rvl~~A~~~~----------------------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~ 546 (884)
T TIGR01522 501 AGLRVIAFASGPE----------------------------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVR 546 (884)
T ss_pred cCCEEEEEEEEcC----------------------------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCe
Confidence 9999999999875 258999999999999999999999999999999
Q ss_pred EEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeE
Q 002029 508 LWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLA 587 (978)
Q Consensus 508 v~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (978)
++|+|||+.+||.++|+++|+......
T Consensus 547 v~miTGD~~~tA~~ia~~~Gi~~~~~~----------------------------------------------------- 573 (884)
T TIGR01522 547 IIMITGDSQETAVSIARRLGMPSKTSQ----------------------------------------------------- 573 (884)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCCCCc-----------------------------------------------------
Confidence 999999999999999999999754321
Q ss_pred EEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhcccccccc--
Q 002029 588 LIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGIS-- 665 (978)
Q Consensus 588 lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~-- 665 (978)
+++|++++.+.++++.+... +..||||++|+||..+|+.+|+ .|++|+|+|||.||+||+++|||||+++
T Consensus 574 -~v~g~~l~~~~~~~l~~~~~------~~~Vfar~~P~~K~~iv~~lq~-~g~~v~mvGDGvND~pAl~~AdVGia~g~~ 645 (884)
T TIGR01522 574 -SVSGEKLDAMDDQQLSQIVP------KVAVFARASPEHKMKIVKALQK-RGDVVAMTGDGVNDAPALKLADIGVAMGQT 645 (884)
T ss_pred -eeEhHHhHhCCHHHHHHHhh------cCeEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHHhCCeeEecCCC
Confidence 45677776655555544433 4569999999999999999998 8999999999999999999999999994
Q ss_pred CCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHH
Q 002029 666 GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYN 743 (978)
Q Consensus 666 g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n 743 (978)
|++. |+.+||+++.+ |..+..+ +.+||.+|+|+++++.|.++.|+..+++.+++.++. ...+++++|++|+|
T Consensus 646 g~~v--a~~aaDivl~dd~~~~i~~~-i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~in 719 (884)
T TIGR01522 646 GTDV--AKEAADMILTDDDFATILSA-IEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMG---FPNPLNAMQILWIN 719 (884)
T ss_pred cCHH--HHHhcCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHc---CCCchhHHHHHHHH
Confidence 3333 77899999987 6668888 899999999999999999999999888877766653 44579999999999
Q ss_pred HHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCceehh
Q 002029 744 VFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGL 823 (978)
Q Consensus 744 ~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~ 823 (978)
++++.+|+++++.++ ++++.+.++|+ .++++++++.++..+++.|++++++.++++++.+.. +. ..
T Consensus 720 l~~d~~~a~~l~~e~--~~~~~m~~~P~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~--~~ 785 (884)
T TIGR01522 720 ILMDGPPAQSLGVEP--VDKDVMRKPPR----PRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD------GV--IT 785 (884)
T ss_pred HHHHhhHHHHhccCC--CChhHhhCCCC----CCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC------Cc--ch
Confidence 999999999999843 55666666665 577899999999999999999998877665543221 11 11
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcc--hh-----hHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhcCChHH
Q 002029 824 EILGTTMYTCVVWVVNCQMALSVTY--FT-----YIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSF 896 (978)
Q Consensus 824 ~~~~~~~f~~~v~~~~~~~~~~~~~--~~-----~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~ 896 (978)
....|++|.++++.+.++.+. .|+ .+ ++.|.++|+++++.+++++++.++|. ++. +|+..+.++..
T Consensus 786 ~~~~t~~f~~~v~~q~~~~~~-~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~-~~~-----~f~~~~l~~~~ 858 (884)
T TIGR01522 786 ARDTTMTFTCFVFFDMFNALA-CRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPP-LQS-----VFQTEALSIKD 858 (884)
T ss_pred hhHHHHHHHHHHHHHHHHHHH-HccCCccccccCcccCHHHHHHHHHHHHHHHHHHHHHH-HHH-----HHcCCCCCHHH
Confidence 234688888888877776643 222 22 34678889999998999988888884 343 67788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 002029 897 WLITLLVLMSSLLPYFTYSAIQMRF 921 (978)
Q Consensus 897 wl~il~~~~~~ll~~~~~k~~~r~~ 921 (978)
|+.+++++++.++..++.|+++|.+
T Consensus 859 w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 859 LLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999988753
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-82 Score=776.72 Aligned_cols=637 Identities=17% Similarity=0.191 Sum_probs=482.2
Q ss_pred CceeecCceeccCCeEEEEEEEeCccchhccc---cCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 002029 42 QQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQN---STGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDL 118 (978)
Q Consensus 42 ~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~---~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~ 118 (978)
+|++|+||.+.+ |.+.++|++||.+|++.+. ... +...+++++.++++...+..+.++++.+..++..+. ..
T Consensus 240 ~n~vfaGT~V~~-G~~~~~V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~-~~-- 314 (903)
T PRK15122 240 PNICFMGTNVVS-GTATAVVVATGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT-KG-- 314 (903)
T ss_pred cceEEeCCEEEe-eeEEEEEEEeccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-cC--
Confidence 389999999998 9999999999999976333 333 445689999999999888776666655543332221 10
Q ss_pred ccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccccCCCccccc
Q 002029 119 QDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARAR 198 (978)
Q Consensus 119 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r 198 (978)
.| ...+..++++++.+||++||++++++...++. +| +++++++|
T Consensus 315 ------~~--------------------~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~------~m----ak~~ilVk 358 (903)
T PRK15122 315 ------DW--------------------LEALLFALAVAVGLTPEMLPMIVSSNLAKGAI------AM----ARRKVVVK 358 (903)
T ss_pred ------CH--------------------HHHHHHHHHHHHHHccchHHHHHHHHHHHHHH------HH----HHcCCeec
Confidence 11 22677889999999999999999998888887 66 88999999
Q ss_pred CcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcccccCCcccCch
Q 002029 199 TSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDE 278 (978)
Q Consensus 199 ~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (978)
+++++|+||++++||||||||||+|+|++.+++..+..
T Consensus 359 ~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~------------------------------------------ 396 (903)
T PRK15122 359 RLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR------------------------------------------ 396 (903)
T ss_pred ccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC------------------------------------------
Confidence 99999999999999999999999999999987521100
Q ss_pred hhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCC
Q 002029 279 RIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVT 358 (978)
Q Consensus 279 ~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~ 358 (978)
.. ++++...++|+.. + . ..+||.|.|+++++.+.|....
T Consensus 397 -----------~~---~~~l~~a~l~s~~--~--~-------~~~~p~e~All~~a~~~~~~~~---------------- 435 (903)
T PRK15122 397 -----------KD---ERVLQLAWLNSFH--Q--S-------GMKNLMDQAVVAFAEGNPEIVK---------------- 435 (903)
T ss_pred -----------Ch---HHHHHHHHHhCCC--C--C-------CCCChHHHHHHHHHHHcCchhh----------------
Confidence 00 1233333333211 0 0 1369999999999988764210
Q ss_pred CccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhccc---------chhhHHHHHHHHHHHHHcc
Q 002029 359 GTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAG 429 (978)
Q Consensus 359 ~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~G 429 (978)
...|+.+..+||+|.||||+++++.++|++++++|||++.|+++|+.. +++.++++.+.+++++.+|
T Consensus 436 ----~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G 511 (903)
T PRK15122 436 ----PAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADG 511 (903)
T ss_pred ----hhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCC
Confidence 145777889999999999999999877889999999999999999742 2234566778889999999
Q ss_pred ceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcCCeEE
Q 002029 430 LRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLW 509 (978)
Q Consensus 430 lr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~ 509 (978)
+|++++|||+++.++..++ ..+..|+||+|+|+++++||+|++++++|++|+++||+++
T Consensus 512 ~rvlavA~k~~~~~~~~~~---------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~ 570 (903)
T PRK15122 512 FRVLLVATREIPGGESRAQ---------------------YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVK 570 (903)
T ss_pred CEEEEEEEeccCccccccc---------------------cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEE
Confidence 9999999999876432110 0123478999999999999999999999999999999999
Q ss_pred EEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEE
Q 002029 510 VLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALI 589 (978)
Q Consensus 510 mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 589 (978)
|+|||+..||.+||+++||..+. +
T Consensus 571 miTGD~~~tA~aIA~~lGI~~~~--------------------------------------------------------v 594 (903)
T PRK15122 571 VLTGDNPIVTAKICREVGLEPGE--------------------------------------------------------P 594 (903)
T ss_pred EECCCCHHHHHHHHHHcCCCCCC--------------------------------------------------------c
Confidence 99999999999999999994211 6
Q ss_pred EcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhcccccccc-CCc
Q 002029 590 IDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGIS-GVE 668 (978)
Q Consensus 590 i~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~-g~e 668 (978)
++|.+++.+.++++.+... +..||||++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+|. |++
T Consensus 595 i~G~el~~~~~~el~~~v~------~~~VfAr~sPe~K~~iV~~Lq~-~G~vVamtGDGvNDaPALk~ADVGIAmg~gtd 667 (903)
T PRK15122 595 LLGTEIEAMDDAALAREVE------ERTVFAKLTPLQKSRVLKALQA-NGHTVGFLGDGINDAPALRDADVGISVDSGAD 667 (903)
T ss_pred cchHhhhhCCHHHHHHHhh------hCCEEEEeCHHHHHHHHHHHHh-CCCEEEEECCCchhHHHHHhCCEEEEeCcccH
Confidence 7788887766655555443 2349999999999999999998 8999999999999999999999999995 444
Q ss_pred cchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHH
Q 002029 669 GMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFF 746 (978)
Q Consensus 669 ~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~i~ 746 (978)
. |+++||+++.+ |..+..+ +.+||.+|+|+++++.|.+..|+..++..++..++. +..++.+.|++|.|+++
T Consensus 668 v--AkeaADiVLldd~f~~Iv~a-i~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~---~~~pl~~~qil~~nli~ 741 (903)
T PRK15122 668 I--AKESADIILLEKSLMVLEEG-VIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFI---PFLPMLAIHLLLQNLMY 741 (903)
T ss_pred H--HHHhcCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh---ccchhHHHHHHHHHHHH
Confidence 4 89999999997 5558888 899999999999999999999998888777665553 33568999999999999
Q ss_pred hhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCceehhhHH
Q 002029 747 TSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEIL 826 (978)
Q Consensus 747 ~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 826 (978)
+ +|+++++.++ ++++.+ +.|+ .++.+++++.+++ ..+.+.+.+++.|++.++.+.. |.......+
T Consensus 742 D-~~~lal~~d~--~~~~~m-~~P~----~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 806 (903)
T PRK15122 742 D-ISQLSLPWDK--MDKEFL-RKPR----KWDAKNIGRFMLW-IGPTSSIFDITTFALMWFVFAA------NSVEMQALF 806 (903)
T ss_pred H-HHHHhhcCCC--CCHhhc-CCCC----CCChhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhcc------CcHhhhhhh
Confidence 9 4999998753 455555 7776 5667777775543 2223333344444433322211 100000124
Q ss_pred HHHHHHHHHHHHHHHHHHhhcch--hhHHHHHHHHHHHHHHHHHHHHhccCc-cccchhHHHHHHHhcCChHHHHHHHHH
Q 002029 827 GTTMYTCVVWVVNCQMALSVTYF--TYIQHLFIWGGITFWYIFLLAYGAMDP-YISTTAYKVFIEACAPAPSFWLITLLV 903 (978)
Q Consensus 827 ~~~~f~~~v~~~~~~~~~~~~~~--~~~~~~~i~~si~~~~i~~~i~~~i~~-~~~~~~~~~~~~~~~~s~~~wl~il~~ 903 (978)
.+.+|+.+++.+.+..+ ..|+. .++.+...+..+++.++++++..++|. .++. +|+..+.++.+|+.++.+
T Consensus 807 ~t~~f~~l~~~q~~~~~-~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~f~~~~l~~~~~~~~~~~ 880 (903)
T PRK15122 807 QSGWFIEGLLSQTLVVH-MLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPLGA-----MVGLEPLPWSYFPWLAAT 880 (903)
T ss_pred HHHHHHHHHHHHHHHHH-hhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHHHH-----HhCCCCCCHHHHHHHHHH
Confidence 56778888888877764 33332 334455666667777777777777774 1233 677888899999999888
Q ss_pred HHHHHHHHHHHHHH
Q 002029 904 LMSSLLPYFTYSAI 917 (978)
Q Consensus 904 ~~~~ll~~~~~k~~ 917 (978)
+++.++...+.|.+
T Consensus 881 ~~~~~~~~e~~k~~ 894 (903)
T PRK15122 881 LLGYCLVAQGMKRF 894 (903)
T ss_pred HHHHHHHHHHHHHH
Confidence 88888777777733
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-80 Score=780.41 Aligned_cols=680 Identities=19% Similarity=0.214 Sum_probs=478.0
Q ss_pred CceeecCceecc------CCeEEEEEEEeCccc---hhccccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002029 42 QQLLLRDSKLRN------TDCIYGAVIFTGRDT---KVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGI 112 (978)
Q Consensus 42 ~n~l~~Gs~l~~------tg~~~gvVv~tG~~T---ki~~~~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~ 112 (978)
+|++|+||.+.. .|.+.|+|++||.+| ++.+....++.+.+++++.+.+++..++.+.++.+++.+ ..++
T Consensus 311 ~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~-~~~~ 389 (1054)
T TIGR01657 311 KHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTI-IELI 389 (1054)
T ss_pred ceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 468999999984 378999999999999 444444455566788999988887766554443332221 1111
Q ss_pred hhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccccCC
Q 002029 113 ATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETD 192 (978)
Q Consensus 113 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~ 192 (978)
..+. .| ...+++++.+++.+||++||++++++...+.. +| ++
T Consensus 390 ~~~~--------~~--------------------~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~------rL----~k 431 (1054)
T TIGR01657 390 KDGR--------PL--------------------GKIILRSLDIITIVVPPALPAELSIGINNSLA------RL----KK 431 (1054)
T ss_pred HcCC--------cH--------------------HHHHHHHHHHHHhhcCchHHHHHHHHHHHHHH------HH----HH
Confidence 1110 11 33688899999999999999999999988888 67 88
Q ss_pred CcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcccccCC
Q 002029 193 KPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKG 272 (978)
Q Consensus 193 ~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (978)
++++||+++.+|.||+++++|||||||||+|+|+|.+++..+........
T Consensus 432 ~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~------------------------------ 481 (1054)
T TIGR01657 432 KGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKI------------------------------ 481 (1054)
T ss_pred CCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccc------------------------------
Confidence 99999999999999999999999999999999999998754321000000
Q ss_pred cccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEe-ecCc---e
Q 002029 273 FNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYE-RTQT---S 348 (978)
Q Consensus 273 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~-r~~~---~ 348 (978)
. .+........+..++++||++....+ + ..|||.|.|+++++ |+.+.. .+.. .
T Consensus 482 -------~------~~~~~~~~~~~~~~~a~C~~~~~~~~------~-~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~ 538 (1054)
T TIGR01657 482 -------V------TEDSSLKPSITHKALATCHSLTKLEG------K-LVGDPLDKKMFEAT---GWTLEEDDESAEPTS 538 (1054)
T ss_pred -------c------ccccccCchHHHHHHHhCCeeEEECC------E-EecCHHHHHHHHhC---CCEEECCCCcccccc
Confidence 0 00000122356778999999865321 1 35799999999975 555433 1110 0
Q ss_pred e--EEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCC-CeEEEEEeCCchHHHHHhcccchhhHHHHHHHHHHH
Q 002029 349 I--SVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE-GTLLLLSKGADSVMFERLAENGREFEEQTKEHINEY 425 (978)
Q Consensus 349 ~--~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~ 425 (978)
. .+.... ....+++++.+||+|+||||||+++.++ +++++|+|||||.|+++|++. ..++++.+.+++|
T Consensus 539 ~~~~i~~~~------~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~--~~p~~~~~~~~~~ 610 (1054)
T TIGR01657 539 ILAVVRTDD------PPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE--TVPSDYQEVLKSY 610 (1054)
T ss_pred cccceeccC------CCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc--CCChhHHHHHHHH
Confidence 0 011000 1257999999999999999999999864 578899999999999999864 3567888899999
Q ss_pred HHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcC
Q 002029 426 ADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAG 505 (978)
Q Consensus 426 a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aG 505 (978)
+.+|+|||++|||++++.+++++.+ .+ .+.+|+||+|+|+++++||+|++++++|+.|++||
T Consensus 611 a~~G~RVLalA~k~l~~~~~~~~~~----------~~--------r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~ag 672 (1054)
T TIGR01657 611 TREGYRVLALAYKELPKLTLQKAQD----------LS--------RDAVESNLTFLGFIVFENPLKPDTKEVIKELKRAS 672 (1054)
T ss_pred HhcCCEEEEEEEeecCccchhhhhh----------cc--------HHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCC
Confidence 9999999999999997543322211 12 25689999999999999999999999999999999
Q ss_pred CeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcc---cccc---hhhhHHHHHHHHHHHHHHHHHhhhhhhccc
Q 002029 506 IKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPES---KTLE---KSEDKSAAAAALKASVLHQLIRGKELLDSS 579 (978)
Q Consensus 506 Ikv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (978)
|++||+|||+..||.+||++|||+.++...+..+....+. ..+. .+.... ........ ...... ...
T Consensus 673 i~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~--~~~ 745 (1054)
T TIGR01657 673 IRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPF-ASTQVEIP----YPLGQD--SVE 745 (1054)
T ss_pred CeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCcccc-cccccccc----Cccccc--chh
Confidence 9999999999999999999999998775555443221100 0000 000000 00000000 000000 000
Q ss_pred cCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhcc
Q 002029 580 NESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD 659 (978)
Q Consensus 580 ~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~Ad 659 (978)
......+.++++|++++.+.+. ..+.+.++..+++ ||||++|+||.++|+.+|+ .|++|+|+|||+||+||||+||
T Consensus 746 ~~~~~~~~~~itG~~l~~l~~~-~~~~l~~~~~~~~--VfAR~sP~qK~~iV~~lq~-~g~~V~m~GDG~ND~~ALK~Ad 821 (1054)
T TIGR01657 746 DLLASRYHLAMSGKAFAVLQAH-SPELLLRLLSHTT--VFARMAPDQKETLVELLQK-LDYTVGMCGDGANDCGALKQAD 821 (1054)
T ss_pred hhcccceEEEEEcHHHHHHHHh-hHHHHHHHHhcCe--EEEecCHHHHHHHHHHHHh-CCCeEEEEeCChHHHHHHHhcC
Confidence 0122356789999999876432 2234555555444 9999999999999999998 8999999999999999999999
Q ss_pred ccccccCCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhH
Q 002029 660 IGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDW 737 (978)
Q Consensus 660 vGI~i~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~ 737 (978)
|||+|+++| |+.||||++.+ |+.+.++ +.+||.++.++.+++.|.+..++...+..++..+. + .+++++
T Consensus 822 VGIam~~~d---as~AA~f~l~~~~~~~I~~~-I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~----~-~~l~~~ 892 (1054)
T TIGR01657 822 VGISLSEAE---ASVAAPFTSKLASISCVPNV-IREGRCALVTSFQMFKYMALYSLIQFYSVSILYLI----G-SNLGDG 892 (1054)
T ss_pred cceeecccc---ceeecccccCCCcHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----c-CcCccH
Confidence 999997765 56899999986 6668888 79999999999999999988888765554432222 3 458899
Q ss_pred HHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCC
Q 002029 738 FLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKG 817 (978)
Q Consensus 738 ~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 817 (978)
|++|+|++++.+|+++++..+ +.+.++++|+ ..+++++.++..++.+++++.++.++.+++....+++...
T Consensus 893 Q~l~i~li~~~~~~l~l~~~~---p~~~l~~~~P------~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~ 963 (1054)
T TIGR01657 893 QFLTIDLLLIFPVALLMSRNK---PLKKLSKERP------PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPE 963 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHcCC---chhhcCCCCC------CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCC
Confidence 999999999999999998753 4444444443 3689999999999999999999988887766543332111
Q ss_pred Cc-----eehhhHHHHHHHHHHHHHHHHHHHHh-hc----chhhHHHHHHHHHHHHHHHHHH
Q 002029 818 GE-----VIGLEILGTTMYTCVVWVVNCQMALS-VT----YFTYIQHLFIWGGITFWYIFLL 869 (978)
Q Consensus 818 g~-----~~~~~~~~~~~f~~~v~~~~~~~~~~-~~----~~~~~~~~~i~~si~~~~i~~~ 869 (978)
.. ........|++|....+ +.+..+.. .. ..+++.|..+++++++.+++++
T Consensus 964 ~~~~~~~~~~~~~~~T~~f~~~~~-~~~~~~~~~~~g~pf~~~~~~N~~~~~~~~~~~~~~~ 1024 (1054)
T TIGR01657 964 NPVDLEKENFPNLLNTVLFFVSSF-QYLITAIVNSKGPPFREPIYKNKPFVYLLITGLGLLL 1024 (1054)
T ss_pred CCCCcccccCccHHHHHHHHHHHH-HHHHheEEEcCCcchhhhHHHhHHHHHHHHHHHHHHH
Confidence 10 01112345777743333 33332221 11 1235677777777766655554
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-80 Score=758.86 Aligned_cols=639 Identities=17% Similarity=0.206 Sum_probs=472.6
Q ss_pred CceeecCceeccCCeEEEEEEEeCccchhc---cccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 002029 42 QQLLLRDSKLRNTDCIYGAVIFTGRDTKVF---QNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDL 118 (978)
Q Consensus 42 ~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~ 118 (978)
+|++|+||.+.+ |.+.++|+.||.+|.++ .....+..+++|+|+.++++..++..+.++++.+..+++.+...
T Consensus 241 ~n~vfaGT~V~~-G~~~~vV~atG~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~--- 316 (902)
T PRK10517 241 DTLCFMGTNVVS-GTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKG--- 316 (902)
T ss_pred ccceeeCceEee-eeEEEEEEEeccccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcC---
Confidence 379999999997 99999999999999663 34455667789999999999998888777777666544322111
Q ss_pred ccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccccCCCccccc
Q 002029 119 QDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARAR 198 (978)
Q Consensus 119 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r 198 (978)
.| ...+..++++++.+||++||++++++...++. +| +++++++|
T Consensus 317 ------~~--------------------~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~------~m----ak~~ilVk 360 (902)
T PRK10517 317 ------DW--------------------WEAALFALSVAVGLTPEMLPMIVTSTLARGAV------KL----SKQKVIVK 360 (902)
T ss_pred ------CH--------------------HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH------HH----HhCCcEEe
Confidence 11 23677889999999999999999998888877 66 88999999
Q ss_pred CcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcccccCCcccCch
Q 002029 199 TSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDE 278 (978)
Q Consensus 199 ~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (978)
+++.+|+||++|+||||||||||+|+|++.++... .+.
T Consensus 361 ~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~---~~~--------------------------------------- 398 (902)
T PRK10517 361 RLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDI---SGK--------------------------------------- 398 (902)
T ss_pred cchhhhhccCCCEEEecCCCccccceEEEEEEecC---CCC---------------------------------------
Confidence 99999999999999999999999999999876310 000
Q ss_pred hhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCC
Q 002029 279 RIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVT 358 (978)
Q Consensus 279 ~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~ 358 (978)
. .++++...++|.... . ..+||.|.|+++++...+..
T Consensus 399 -----------~---~~~ll~~a~l~~~~~----~-------~~~~p~d~All~~a~~~~~~------------------ 435 (902)
T PRK10517 399 -----------T---SERVLHSAWLNSHYQ----T-------GLKNLLDTAVLEGVDEESAR------------------ 435 (902)
T ss_pred -----------C---HHHHHHHHHhcCCcC----C-------CCCCHHHHHHHHHHHhcchh------------------
Confidence 0 023445555543321 0 13699999999998753210
Q ss_pred CccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhccc---------chhhHHHHHHHHHHHHHcc
Q 002029 359 GTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAG 429 (978)
Q Consensus 359 ~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~G 429 (978)
.....|+.+..+||||+||||+++++.+++.+.+++|||++.|+++|+.. +++..+++.+..++++.+|
T Consensus 436 --~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G 513 (902)
T PRK10517 436 --SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQG 513 (902)
T ss_pred --hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcC
Confidence 01246778889999999999999999877888999999999999999752 2234566778889999999
Q ss_pred ceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcCCeEE
Q 002029 430 LRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLW 509 (978)
Q Consensus 430 lr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~ 509 (978)
+||+++|||+++.++. ++ + ...|+|++|+|+++++||+|++++++|++|+++||+++
T Consensus 514 ~rvlavA~k~~~~~~~-~~-------------~---------~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~ 570 (902)
T PRK10517 514 LRVVAVATKYLPAREG-DY-------------Q---------RADESDLILEGYIAFLDPPKETTAPALKALKASGVTVK 570 (902)
T ss_pred CEEEEEEEecCCcccc-cc-------------c---------cccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEE
Confidence 9999999998865321 00 0 11368999999999999999999999999999999999
Q ss_pred EEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEE
Q 002029 510 VLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALI 589 (978)
Q Consensus 510 mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 589 (978)
|+|||+..||.+||+++||..+. +
T Consensus 571 miTGD~~~tA~~IA~~lGI~~~~--------------------------------------------------------v 594 (902)
T PRK10517 571 ILTGDSELVAAKVCHEVGLDAGE--------------------------------------------------------V 594 (902)
T ss_pred EEcCCCHHHHHHHHHHcCCCccC--------------------------------------------------------c
Confidence 99999999999999999993211 6
Q ss_pred EcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhccccccccCCcc
Q 002029 590 IDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEG 669 (978)
Q Consensus 590 i~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~ 669 (978)
++|.+++.+.++++.+...+ ..||+|++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+|+ +..
T Consensus 595 ~~G~el~~l~~~el~~~~~~------~~VfAr~sPe~K~~IV~~Lq~-~G~vVam~GDGvNDaPALk~ADVGIAmg-~gt 666 (902)
T PRK10517 595 LIGSDIETLSDDELANLAER------TTLFARLTPMHKERIVTLLKR-EGHVVGFMGDGINDAPALRAADIGISVD-GAV 666 (902)
T ss_pred eeHHHHHhCCHHHHHHHHhh------CcEEEEcCHHHHHHHHHHHHH-CCCEEEEECCCcchHHHHHhCCEEEEeC-CcC
Confidence 67777776665555544432 239999999999999999998 8999999999999999999999999995 222
Q ss_pred chhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHh
Q 002029 670 MQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFT 747 (978)
Q Consensus 670 ~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~i~~ 747 (978)
..|+++||+++.+ |..+..+ +.+||.+|+|+++++.|.+..|+..++..++..++. +..++.+.|++|.|++++
T Consensus 667 dvAkeaADiVLldd~~~~I~~a-i~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~---~~~pl~~~qiL~inl~~D 742 (902)
T PRK10517 667 DIAREAADIILLEKSLMVLEEG-VIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFL---PFLPMLPLHLLIQNLLYD 742 (902)
T ss_pred HHHHHhCCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh---hhhhhHHHHHHHHHHHHH
Confidence 3399999999998 4558888 899999999999999999999999988888776663 224689999999999999
Q ss_pred hhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCceehhhHHH
Q 002029 748 SLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILG 827 (978)
Q Consensus 748 ~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 827 (978)
+|.++++.++ ++ +.++++|+-+. ... .....+..|++.+++.+..+++.+.. ++.... .....+.
T Consensus 743 -~~~~al~~d~--~~-~~~m~~p~r~~----~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~ 807 (902)
T PRK10517 743 -VSQVAIPFDN--VD-DEQIQKPQRWN----PAD----LGRFMVFFGPISSIFDILTFCLMWWV--FHANTP-ETQTLFQ 807 (902)
T ss_pred -HhHHhhcCCC--CC-hhhhcCCCCCC----HHH----HHHHHHHHHHHHHHHHHHHHHHHHHH--ccccch-hhHhHHH
Confidence 7999998853 34 44555565211 111 12223455666554444333322111 110000 0001244
Q ss_pred HHHHHHHHHHHHHHHHHhhcch--hhHHHHHHHHHHHHHHHHHHHHhccCcc-ccchhHHHHHHHhcCC--hHHHHHHHH
Q 002029 828 TTMYTCVVWVVNCQMALSVTYF--TYIQHLFIWGGITFWYIFLLAYGAMDPY-ISTTAYKVFIEACAPA--PSFWLITLL 902 (978)
Q Consensus 828 ~~~f~~~v~~~~~~~~~~~~~~--~~~~~~~i~~si~~~~i~~~i~~~i~~~-~~~~~~~~~~~~~~~s--~~~wl~il~ 902 (978)
+.+|+.+++.+.+..+ ..|+. .++.+...+..+++.++.+++..++|.. ++. +|+..+.+ +..|+.+++
T Consensus 808 ~~~F~~~~~~q~~~~~-~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~~~~~~l~~~~~~~~~~~~ 881 (902)
T PRK10517 808 SGWFVVGLLSQTLIVH-MIRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPLAS-----YLQLQALPLSYFPWLVAIL 881 (902)
T ss_pred HHHHHHHHHHHHHHHH-hhccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHHHH-----hhCCcCCChhHHHHHHHHH
Confidence 5568888888777764 33332 3456677788888888888877887721 232 55566666 567777766
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 002029 903 VLMSSLLPYFTYSAIQMR 920 (978)
Q Consensus 903 ~~~~~ll~~~~~k~~~r~ 920 (978)
++.+ ++....-+.+.|+
T Consensus 882 ~~~~-~~~e~~K~~~~~~ 898 (902)
T PRK10517 882 AGYM-TLTQLVKGFYSRR 898 (902)
T ss_pred HHHH-HHHHHHHHHHHHh
Confidence 6655 3333333344443
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-79 Score=753.59 Aligned_cols=641 Identities=18% Similarity=0.192 Sum_probs=474.7
Q ss_pred CCccccCCc---------------CceeecCceeccCCeEEEEEEEeCccchhc---cccCCCCCCcCHHHHHHHHHHHH
Q 002029 33 EEQQYPLTP---------------QQLLLRDSKLRNTDCIYGAVIFTGRDTKVF---QNSTGPPSKRSKVERRMDKIIYF 94 (978)
Q Consensus 33 ~~~~~pl~~---------------~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~~~~n~~~~~ 94 (978)
.||+.|+.+ +|++|+||.+.+ |.+.++|++||.+|.++ ..... +.+++|+|+.++++..+
T Consensus 183 TGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~-G~~~~~V~~tG~~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~ 260 (867)
T TIGR01524 183 TGESLPVEKFVEDKRARDPEILERENLCFMGTNVLS-GHAQAVVLATGSSTWFGSLAIAATE-RRGQTAFDKGVKSVSKL 260 (867)
T ss_pred cCCCCcccccCCccccccccccccccceecCCeEEE-eEEEEEEEEEcCccHHHHHHHHhhC-CCCCCcHHHHHHHHHHH
Confidence 388888732 478999999997 99999999999999663 33344 55678999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHH
Q 002029 95 LFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKI 174 (978)
Q Consensus 95 ~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~ 174 (978)
+..+.++++++.++++.+... .| ...+..++++++.+||++||++++++..
T Consensus 261 ~~~~~~~~~~i~~~~~~~~~~---------~~--------------------~~~~~~al~l~v~~iP~~Lp~~vt~~la 311 (867)
T TIGR01524 261 LIRFMLVMVPVVLMINGLMKG---------DW--------------------LEAFLFALAVAVGLTPEMLPMIVSSNLA 311 (867)
T ss_pred HHHHHHHHHHHheehHHHhcC---------CH--------------------HHHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence 988887777666544322111 12 2267788999999999999999999988
Q ss_pred HHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCC
Q 002029 175 LQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGS 254 (978)
Q Consensus 175 ~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~ 254 (978)
.++. +| +++++++|+++.+|+||++++||||||||||+|+|++.++..... .
T Consensus 312 ~g~~------~m----ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~-----~------------- 363 (867)
T TIGR01524 312 KGAI------NM----SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG-----E------------- 363 (867)
T ss_pred HHHH------HH----HhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC-----C-------------
Confidence 8887 66 889999999999999999999999999999999999988641100 0
Q ss_pred CCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHH
Q 002029 255 PLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAA 334 (978)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a 334 (978)
. .++++...++|+... . ..+||.|.|+++++
T Consensus 364 -----------------------------------~---~~~~l~~a~l~~~~~----~-------~~~~p~~~Al~~~~ 394 (867)
T TIGR01524 364 -----------------------------------T---SERVLKMAWLNSYFQ----T-------GWKNVLDHAVLAKL 394 (867)
T ss_pred -----------------------------------C---HHHHHHHHHHhCCCC----C-------CCCChHHHHHHHHH
Confidence 0 013344444443321 0 13599999999998
Q ss_pred HHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhccc----
Q 002029 335 RELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN---- 410 (978)
Q Consensus 335 ~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---- 410 (978)
.+.+... .+..|+.+..+||||+||||+++++++++.+++++|||++.|+++|+..
T Consensus 395 ~~~~~~~--------------------~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~ 454 (867)
T TIGR01524 395 DESAARQ--------------------TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGG 454 (867)
T ss_pred Hhhchhh--------------------HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCC
Confidence 7532110 1246777889999999999999998776678899999999999999752
Q ss_pred -----chhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEe
Q 002029 411 -----GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATA 485 (978)
Q Consensus 411 -----~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ 485 (978)
+++.++++.+.+++++.+|+|++++|||+++.++.+ + .+..|+||+|+|+++
T Consensus 455 ~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~-~----------------------~~~~e~~l~~lGli~ 511 (867)
T TIGR01524 455 AVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEAD-F----------------------TKTDEEQLIIEGFLG 511 (867)
T ss_pred ceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCccccc-c----------------------cccccCCcEEEEEEE
Confidence 223456778888999999999999999998754310 0 012368999999999
Q ss_pred eccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHH
Q 002029 486 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 565 (978)
Q Consensus 486 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (978)
++||+|++++++|++|+++||+++|+|||+..||.+||+++||..++
T Consensus 512 l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~--------------------------------- 558 (867)
T TIGR01524 512 FLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAND--------------------------------- 558 (867)
T ss_pred eeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC---------------------------------
Confidence 99999999999999999999999999999999999999999995321
Q ss_pred HHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEE
Q 002029 566 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAI 645 (978)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~ai 645 (978)
+++|.+++.+.++++.+... +..+|||++|+||.++|+.+|+ .|++|+|+
T Consensus 559 -----------------------v~~g~~l~~~~~~el~~~~~------~~~vfAr~~Pe~K~~iV~~lq~-~G~vVam~ 608 (867)
T TIGR01524 559 -----------------------FLLGADIEELSDEELARELR------KYHIFARLTPMQKSRIIGLLKK-AGHTVGFL 608 (867)
T ss_pred -----------------------eeecHhhhhCCHHHHHHHhh------hCeEEEECCHHHHHHHHHHHHh-CCCEEEEE
Confidence 55666666555444444332 3349999999999999999998 89999999
Q ss_pred cCCcCCHHHhhhcccccccc-CCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHH
Q 002029 646 GDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFF 722 (978)
Q Consensus 646 GDG~ND~~ml~~AdvGI~i~-g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~ 722 (978)
|||+||+|||++|||||+|+ |++. |+++||+++.+ |..+..+ +.+||.+|+|+++++.|.+..|+..++..++.
T Consensus 609 GDGvNDapALk~AdVGIAmg~gtdv--Ak~aADiVLldd~~~~I~~a-i~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~ 685 (867)
T TIGR01524 609 GDGINDAPALRKADVGISVDTAADI--AKEASDIILLEKSLMVLEEG-VIEGRNTFGNILKYLKMTASSNFGNVFSVLVA 685 (867)
T ss_pred CCCcccHHHHHhCCEEEEeCCccHH--HHHhCCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 99999999999999999995 3343 89999999998 5558888 89999999999999999999999988877776
Q ss_pred HHhhccccccchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHH
Q 002029 723 EAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIF 802 (978)
Q Consensus 723 ~~~~~~s~~~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 802 (978)
.++. ...|+.+.|++|.|++++ +|+++++.++ +. ...++.|+- ++.+ .....++..|++.+++.+
T Consensus 686 ~~~~---~~~pl~~~qil~inl~~d-~~~~al~~~~--~~-~~~m~~p~~----~~~~----~~~~~~~~~g~~~~~~~~ 750 (867)
T TIGR01524 686 SAFI---PFLPMLSLHLLIQNLLYD-FSQLTLPWDK--MD-REFLKKPHQ----WEQK----GMGRFMLCIGPVSSIFDI 750 (867)
T ss_pred HHHh---hhhhHHHHHHHHHHHHHH-HHHHhhcCCC--CC-hHhhCCCCC----CChh----hHHHHHHHHHHHHHHHHH
Confidence 6653 335699999999999999 7999998753 34 444466662 2222 222334445665544433
Q ss_pred HHHHHhhccccccCCCceehhhHHHHHHHHHHHHHHHHHHHHhhcch--hhHHHHHHHHHHHHHHHHHHHHhccCcc-cc
Q 002029 803 FFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYF--TYIQHLFIWGGITFWYIFLLAYGAMDPY-IS 879 (978)
Q Consensus 803 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~~~~~~~--~~~~~~~i~~si~~~~i~~~i~~~i~~~-~~ 879 (978)
..++..+.. +...+. .....+.+..|+.+++.+.+..+ ..|+. .++.+...+..+++.++++++..++|.. ++
T Consensus 751 ~~~~~~~~~--~~~~~~-~~~~~~~t~~f~~~~~~~~~~~~-~~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~ 826 (867)
T TIGR01524 751 ATFLLMWFV--FSANTV-EEQALFQSGWFVVGLLSQTLVVH-MIRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLG 826 (867)
T ss_pred HHHHHHHHH--hcccch-hhhhHHHHHHHHHHHHHHHHHHH-hhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhh
Confidence 332222111 000111 01113467778888888877764 33332 3456777788888888888888888852 23
Q ss_pred chhHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHHHH
Q 002029 880 TTAYKVFIEACAP--APSFWLITLLVLMSSLLPYFTYSA 916 (978)
Q Consensus 880 ~~~~~~~~~~~~~--s~~~wl~il~~~~~~ll~~~~~k~ 916 (978)
. +|+..+. ++..|+.++.++++ +...+.|.
T Consensus 827 ~-----~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~ 858 (867)
T TIGR01524 827 H-----SIGLVSLPLSYFPWLIAILVGYM--ATMQLVKT 858 (867)
T ss_pred h-----hhccccCCccHHHHHHHHHHHHH--HHHHHHHH
Confidence 3 4555544 55567777666554 33444443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-74 Score=702.75 Aligned_cols=585 Identities=19% Similarity=0.259 Sum_probs=448.2
Q ss_pred eeEEE-EEEC-----CccccC--CcCceeecCceeccCCeEEEEEEEeCccchhcc---ccCCCCCCcCHHHHHHHHHHH
Q 002029 25 TFVGS-LELE-----EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ---NSTGPPSKRSKVERRMDKIIY 93 (978)
Q Consensus 25 ~f~G~-~~~~-----~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~---~~~~~~~k~s~l~~~~n~~~~ 93 (978)
-.+|. +.+| ||+.|+ ..+|.+|+||.+.+ |.+.++|+.||.+|.+.+ ...+++.+++++|+.++++..
T Consensus 130 vi~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~-G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~ 208 (755)
T TIGR01647 130 LFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQ-GEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGL 208 (755)
T ss_pred EEecCceEEEcccccCCccceEeccCCeeeccCEEEc-cEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHH
Confidence 34565 6665 899998 56899999999997 999999999999996643 445556667899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHH
Q 002029 94 FLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVK 173 (978)
Q Consensus 94 ~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~ 173 (978)
++.++.++++++.++++....+. .| ...+..++++++.+||++||++++++.
T Consensus 209 ~~~~~~~~~~~i~~~~~~~~~~~--------~~--------------------~~~~~~~i~vlv~a~P~~Lp~~~~~~l 260 (755)
T TIGR01647 209 FLIVLIGVLVLIELVVLFFGRGE--------SF--------------------REGLQFALVLLVGGIPIAMPAVLSVTM 260 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC--------CH--------------------HHHHHHHHHHHHHhCCcchHHHHHHHH
Confidence 99888887777665544331211 11 236778899999999999999999999
Q ss_pred HHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcC
Q 002029 174 ILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKG 253 (978)
Q Consensus 174 ~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~ 253 (978)
..++. +| +++++++|+++.+|+||.+|+||||||||||+|+|++.+++..+..+.
T Consensus 261 a~g~~------r~----ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~--------------- 315 (755)
T TIGR01647 261 AVGAA------EL----AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFD--------------- 315 (755)
T ss_pred HHHHH------HH----HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCC---------------
Confidence 88887 66 889999999999999999999999999999999999999875431100
Q ss_pred CCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHH
Q 002029 254 SPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIA 333 (978)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~ 333 (978)
.++++...++|+.. .++||.|.|++++
T Consensus 316 ----------------------------------------~~~~l~~a~~~~~~-------------~~~~pi~~Ai~~~ 342 (755)
T TIGR01647 316 ----------------------------------------KDDVLLYAALASRE-------------EDQDAIDTAVLGS 342 (755)
T ss_pred ----------------------------------------HHHHHHHHHHhCCC-------------CCCChHHHHHHHH
Confidence 01345555666521 1369999999998
Q ss_pred HHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCC-CeEEEEEeCCchHHHHHhcccch
Q 002029 334 ARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE-GTLLLLSKGADSVMFERLAENGR 412 (978)
Q Consensus 334 a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~ 412 (978)
+++.+. ....|+++..+||+|.+|+|+++++.++ |+.++++|||++.|+++|+.. .
T Consensus 343 ~~~~~~----------------------~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-~ 399 (755)
T TIGR01647 343 AKDLKE----------------------ARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-K 399 (755)
T ss_pred HHHhHH----------------------HHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-H
Confidence 876430 0245778889999999999999998764 778899999999999999754 2
Q ss_pred hhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCC
Q 002029 413 EFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQN 492 (978)
Q Consensus 413 ~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~ 492 (978)
+..+++.+.+++++.+|+|++++|+|+. |++|+|+|+++++||+|+
T Consensus 400 ~~~~~~~~~~~~~~~~G~rvl~vA~~~~----------------------------------e~~l~~~Gli~l~Dp~R~ 445 (755)
T TIGR01647 400 EIEEKVEEKVDELASRGYRALGVARTDE----------------------------------EGRWHFLGLLPLFDPPRH 445 (755)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEEEEcC----------------------------------CCCcEEEEEeeccCCChh
Confidence 3566778889999999999999999731 378999999999999999
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhh
Q 002029 493 GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRG 572 (978)
Q Consensus 493 ~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (978)
+++++|++|+++||+++|+|||+..||.+||+++||..+. ++++.
T Consensus 446 ~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~-----~~~~~------------------------------ 490 (755)
T TIGR01647 446 DTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNI-----YTADV------------------------------ 490 (755)
T ss_pred hHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-----cCHHH------------------------------
Confidence 9999999999999999999999999999999999995421 00000
Q ss_pred hhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCH
Q 002029 573 KELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDV 652 (978)
Q Consensus 573 ~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~ 652 (978)
+.+|++++.+.++++.+... . ..+|||++|+||.++|+.+|+ .|++|+|+|||+||+
T Consensus 491 ----------------l~~~~~~~~~~~~~~~~~~~----~--~~vfAr~~Pe~K~~iV~~lq~-~G~~VamvGDGvNDa 547 (755)
T TIGR01647 491 ----------------LLKGDNRDDLPSGELGEMVE----D--ADGFAEVFPEHKYEIVEILQK-RGHLVGMTGDGVNDA 547 (755)
T ss_pred ----------------hcCCcchhhCCHHHHHHHHH----h--CCEEEecCHHHHHHHHHHHHh-cCCEEEEEcCCcccH
Confidence 12222332222333333332 2 239999999999999999998 899999999999999
Q ss_pred HHhhhccccccccCCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhcccc
Q 002029 653 GMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSG 730 (978)
Q Consensus 653 ~ml~~AdvGI~i~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~ 730 (978)
|||++|||||+|++ ....|+++||+++.+ |..+..+ +.+||.+|+|+++++.|.+..|+..++..++..++.+
T Consensus 548 pAL~~AdVGIAm~~-gtdvAkeaADivLl~d~l~~I~~a-i~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~--- 622 (755)
T TIGR01647 548 PALKKADVGIAVAG-ATDAARSAADIVLTEPGLSVIVDA-ILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN--- 622 (755)
T ss_pred HHHHhCCeeEEecC-CcHHHHHhCCEEEEcCChHHHHHH-HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC---
Confidence 99999999999953 223389999999998 5558888 8999999999999999999999998877766655443
Q ss_pred ccchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 002029 731 QPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMK 810 (978)
Q Consensus 731 ~~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 810 (978)
.+ ++++|++|.|++++. |.+++++++.+++ ++|+ ...++ ..+...+..|++.++..|.++++.+.
T Consensus 623 ~~-l~~~~il~~~l~~d~-~~~~l~~~~~~~~-----~~p~-------~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~ 687 (755)
T TIGR01647 623 FY-FPPIMVVIIAILNDG-TIMTIAYDNVKPS-----KLPQ-------RWNLR-EVFTMSTVLGIYLVISTFLLLAIALD 687 (755)
T ss_pred cc-hhHHHHHHHHHHHhH-hHhhccCCCCCCC-----CCCC-------ccchH-HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33 899999999999995 7999987654321 2333 22232 44555677888888887777766553
Q ss_pred cccc-cCCCceehhhHHHHHHHHHHHHHHHHHHHH-hhcchhh
Q 002029 811 QQAF-RKGGEVIGLEILGTTMYTCVVWVVNCQMAL-SVTYFTY 851 (978)
Q Consensus 811 ~~~~-~~~g~~~~~~~~~~~~f~~~v~~~~~~~~~-~~~~~~~ 851 (978)
...+ ...+.......+.|++|+.+++.+.+.++. +++...|
T Consensus 688 ~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~ 730 (755)
T TIGR01647 688 TSFFIDKFGLQLLHGNLQSLIYLQVSISGQATIFVTRTHGFFW 730 (755)
T ss_pred cccchhcccccccHhhhHHHHHHHHHHHHHHHHheeccCCCCc
Confidence 1101 111111123357899999999988887753 3344444
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-76 Score=662.63 Aligned_cols=723 Identities=19% Similarity=0.244 Sum_probs=555.0
Q ss_pred cCCcCceeecCceeccCCeEEEEEEEeCccchhcccc---CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 002029 38 PLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNS---TGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIAT 114 (978)
Q Consensus 38 pl~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~~---~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~ 114 (978)
|++..|+-|.+|.+.+ |.++|+|++||.+|.+++.. ......++|+++.+++++.++..+.+++++..+++....
T Consensus 232 ~~Et~Ni~f~st~~ve-G~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~- 309 (1019)
T KOG0203|consen 232 PLETRNIAFFSTNCVE-GTGRGIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL- 309 (1019)
T ss_pred chhheeeeeeeeEEec-ceEEEEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh-
Confidence 4567899999999998 99999999999999875543 345677899999999999999888777776665444332
Q ss_pred ccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccccCCCc
Q 002029 115 REDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKP 194 (978)
Q Consensus 115 ~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~ 194 (978)
++ .| +..+...+.+.++.+|.+|+++++.....-+. +| ++++
T Consensus 310 gy--------~~--------------------l~avv~~i~iivAnvPeGL~~tvTv~Ltltak------rM----a~Kn 351 (1019)
T KOG0203|consen 310 GY--------EW--------------------LRAVVFLIGIIVANVPEGLLATVTVCLTLTAK------RM----ARKN 351 (1019)
T ss_pred cc--------hh--------------------HHHhhhhheeEEecCcCCccceehhhHHHHHH------HH----hhce
Confidence 21 12 33555588889999999999999998888888 67 8999
Q ss_pred ccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcccccCCcc
Q 002029 195 ARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFN 274 (978)
Q Consensus 195 ~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (978)
+++|++.++|+||...+||||||||||+|.|+|..+|.++.....+..+. +++.
T Consensus 352 c~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~------~~~~-------------------- 405 (1019)
T KOG0203|consen 352 CLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTED------QSGQ-------------------- 405 (1019)
T ss_pred eEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhh------hhcc--------------------
Confidence 99999999999999999999999999999999999998877544322110 0000
Q ss_pred cCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCC--cEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEE
Q 002029 275 FEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENG--KISYEAESPDEAAFVIAARELGFEFYERTQTSISVH 352 (978)
Q Consensus 275 ~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~--~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~ 352 (978)
.....+.....+.++.++||.+.....+.+- .-.-..+++.|.||++++.-.-...
T Consensus 406 -----------~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~----------- 463 (1019)
T KOG0203|consen 406 -----------SFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV----------- 463 (1019)
T ss_pred -----------cccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH-----------
Confidence 0011245667899999999999876443221 1122358999999999987542211
Q ss_pred ecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCC---CeEEEEEeCCchHHHHHhccc---------chhhHHHHHH
Q 002029 353 ELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE---GTLLLLSKGADSVMFERLAEN---------GREFEEQTKE 420 (978)
Q Consensus 353 ~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~---~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~ 420 (978)
...++.++.+..+||+|++|+.-.+.+.++ .++.+.+|||||.++++|+-. ++...+.+.+
T Consensus 464 -------~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ 536 (1019)
T KOG0203|consen 464 -------MELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQE 536 (1019)
T ss_pred -------HHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHH
Confidence 113577889999999999999999988764 578999999999999999853 3456778888
Q ss_pred HHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHH
Q 002029 421 HINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDK 500 (978)
Q Consensus 421 ~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~ 500 (978)
...++...|-||+.||++.++++++.+.-+- +- +..+.--.+|.|+|++++-||+|..+|+++..
T Consensus 537 ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f----------~~-----d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~ 601 (1019)
T KOG0203|consen 537 AYLELGGLGERVLGFCDLELPDEKFPRGFQF----------DT-----DDVNFPTDNLRFLGLISMIDPPRAAVPDAVGK 601 (1019)
T ss_pred HHHHhhhcchHHHHHHHHhcchhcCCCceEe----------ec-----CCCCCcchhccccchhhccCCCcccCchhhhh
Confidence 8899999999999999999998776432110 00 00012236899999999999999999999999
Q ss_pred HHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhcccc
Q 002029 501 LAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSN 580 (978)
Q Consensus 501 L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (978)
||.||||+.|+|||++.||.+||++.||+..+..... .+..+......+.
T Consensus 602 CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e--------------------------~~a~r~~~~v~~v---- 651 (1019)
T KOG0203|consen 602 CRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVE--------------------------DIAKRLNIPVEQV---- 651 (1019)
T ss_pred hhhhCceEEEEecCccchhhhhhhheeeecCCchhhh--------------------------hhHHhcCCccccc----
Confidence 9999999999999999999999999999876543211 0111111111111
Q ss_pred CCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhccc
Q 002029 581 ESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADI 660 (978)
Q Consensus 581 ~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~Adv 660 (978)
+.....+.++.|.+|..+.++++.+ +.....-.||+|.||+||..||+..|+ .|.+|+.+|||+||+||||.|||
T Consensus 652 n~~~a~a~VihG~eL~~~~~~qld~----il~nh~eIVFARTSPqQKLiIVe~cQr-~GaiVaVTGDGVNDsPALKKADI 726 (1019)
T KOG0203|consen 652 NSRDAKAAVIHGSELPDMSSEQLDE----LLQNHQEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADI 726 (1019)
T ss_pred CccccceEEEecccccccCHHHHHH----HHHhCCceEEEecCccceEEeEhhhhh-cCcEEEEeCCCcCCChhhccccc
Confidence 2334678999999998777665554 444556689999999999999999998 99999999999999999999999
Q ss_pred cccc--cCCccchhccccceehhchhh--hHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccc-hh
Q 002029 661 GVGI--SGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPV-YN 735 (978)
Q Consensus 661 GI~i--~g~e~~~a~~asD~vi~~f~~--l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~-~~ 735 (978)
||+| +|++. +++|||++++|++| ++.- +.+||.+|+|++|.|.|.+..|+..+.+.++|.++ |.|+ +.
T Consensus 727 GVAMGiaGSDv--sKqAADmILLDDNFASIVtG-VEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~----giPLplg 799 (1019)
T KOG0203|consen 727 GVAMGIAGSDV--SKQAADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILF----GIPLPLG 799 (1019)
T ss_pred ceeeccccchH--HHhhcceEEecCcchhheee-cccceehhhhHHHHHHHHHHhcchhHhHHHHHHHh----CCCcccc
Confidence 9965 77777 89999999999776 6656 89999999999999999999999999999888887 5665 88
Q ss_pred hHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHH-HHHHHHHHHHHHHHHHHHHHhhccccc
Q 002029 736 DWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRI-LGWALNGVANAAIIFFFCIHAMKQQAF 814 (978)
Q Consensus 736 ~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~ 814 (978)
.+.++.+.+..+++|++.++++. +..+.|++.|+ .+..+++.|.+.+ +.+...|++|++..|+.++..+...+|
T Consensus 800 titIL~IDLgTDmvPAiSLAYE~--aEsDIM~r~PR---~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf 874 (1019)
T KOG0203|consen 800 TVTILCIDLGTDIVPAISLAYEK--AESDIMLRPPR---NPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGF 874 (1019)
T ss_pred hhhhhhhHhhcccchhhhHhccC--chhhHHhcCCC---CCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999863 45555666676 3466788998874 578899999999999988887665444
Q ss_pred ---------------------cCCCceehhh-------HHHHHHHHHHHHHHHHHHHH-hhcchhh----HHHHHHHHHH
Q 002029 815 ---------------------RKGGEVIGLE-------ILGTTMYTCVVWVVNCQMAL-SVTYFTY----IQHLFIWGGI 861 (978)
Q Consensus 815 ---------------------~~~g~~~~~~-------~~~~~~f~~~v~~~~~~~~~-~~~~~~~----~~~~~i~~si 861 (978)
.+.|....+. ...+..|.+++.++-..+++ .+++-+. +.|..+++++
T Consensus 875 ~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v 954 (1019)
T KOG0203|consen 875 LPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAV 954 (1019)
T ss_pred ChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHH
Confidence 1223333322 22344444455555554443 2333333 3566777788
Q ss_pred HHHHHHHHHHhccCccccchhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 002029 862 TFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFP 923 (978)
Q Consensus 862 ~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~~r~~~p 923 (978)
++-.++..++++.|+. .. .++..++-+.+|+..+...++.++.+++.|++.|.+.-
T Consensus 955 ~~e~~La~fl~y~pg~-~~-----~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~P~ 1010 (1019)
T KOG0203|consen 955 IFETCLACFLCYCPGV-LY-----ALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRYPG 1010 (1019)
T ss_pred HHHHHHHHHHhcCccH-HH-----HhccCCCCcEEEEecccceeeeeeHHHHHhHhhhhCCC
Confidence 8877777788888863 22 56677888899999999999999999999999987643
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-68 Score=609.58 Aligned_cols=645 Identities=21% Similarity=0.278 Sum_probs=443.9
Q ss_pred CceeecCceecc-----CCeEEEEEEEeCccc---hhccccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Q 002029 42 QQLLLRDSKLRN-----TDCIYGAVIFTGRDT---KVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGI- 112 (978)
Q Consensus 42 ~n~l~~Gs~l~~-----tg~~~gvVv~tG~~T---ki~~~~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~- 112 (978)
.|.+|.||++.. .+.+.|+|++||..| ++.++.-.++.-..++-+..-+++..+.++ +++.++...+
T Consensus 332 rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l~~i----a~~gfiy~~i~ 407 (1140)
T KOG0208|consen 332 RHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYRDSFKFILFLVII----ALIGFIYTAIV 407 (1140)
T ss_pred cceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHHHHHHHHHHHHHHH----HHHHHHHHhHh
Confidence 578999999876 567899999999999 445555555444444555444444333332 3333222222
Q ss_pred --hhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhcccccccc
Q 002029 113 --ATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEE 190 (978)
Q Consensus 113 --~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~ 190 (978)
..+.. .-..+++++.++...+|.+||.++++.....-. ||
T Consensus 408 l~~~g~~----------------------------~~~iiirsLDliTi~VPPALPAaltvG~~~a~~------RL---- 449 (1140)
T KOG0208|consen 408 LNLLGVP----------------------------LKTIIIRSLDLITIVVPPALPAALTVGIIYAQS------RL---- 449 (1140)
T ss_pred HHHcCCC----------------------------HHHHhhhhhcEEEEecCCCchhhhhHHHHHHHH------HH----
Confidence 11111 122688999999999999999999887666555 66
Q ss_pred CCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhccccc
Q 002029 191 TDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASI 270 (978)
Q Consensus 191 ~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (978)
+++++.|-+++.+...|+++++|||||||||++.+.+..+..-...-.. ..+..... +.+..+
T Consensus 450 kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~-~~~~~~~~--~~~~~~-------------- 512 (1140)
T KOG0208|consen 450 KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDD-GPELKVVT--EDSLQL-------------- 512 (1140)
T ss_pred HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccc-cchhhhhh--hhhccc--------------
Confidence 8999999999999999999999999999999999999887652221110 00000000 000000
Q ss_pred CCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeec-----
Q 002029 271 KGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERT----- 345 (978)
Q Consensus 271 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~----- 345 (978)
+ .++. . +........+..++|.||+.....+. ..++|.|.-+.+ ..|+.+.+.+
T Consensus 513 ----~--~~l~----~-~~~~~~~~~~~~a~atCHSL~~v~g~-------l~GDPLdlkmfe---~t~w~~ee~~~~~~~ 571 (1140)
T KOG0208|consen 513 ----F--YKLS----L-RSSSLPMGNLVAAMATCHSLTLVDGT-------LVGDPLDLKMFE---STGWVYEEADIEDEA 571 (1140)
T ss_pred ----e--eecc----c-cccCCchHHHHHHHhhhceeEEeCCe-------eccCceeeeeee---ccceEEEeccccchh
Confidence 0 0000 0 01111234688999999988764322 236888877654 3566664421
Q ss_pred ---Cce---eEEEecC---CCCCccceeEeeEeEeecCCCCCceEEEEEEeC-CCeEEEEEeCCchHHHHHhcccchhhH
Q 002029 346 ---QTS---ISVHELD---PVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE-EGTLLLLSKGADSVMFERLAENGREFE 415 (978)
Q Consensus 346 ---~~~---~~i~~~~---~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~ 415 (978)
.+. ..++... +.+....+..+-+++.+||+|.-+||||||+++ +.+..+|+|||||.|.+.|+++ ..+
T Consensus 572 ~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~--tvP 649 (1140)
T KOG0208|consen 572 TREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE--TVP 649 (1140)
T ss_pred hhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcc--cCC
Confidence 011 1122211 111111223799999999999999999999987 4678999999999999999876 467
Q ss_pred HHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChH
Q 002029 416 EQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVP 495 (978)
Q Consensus 416 ~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~ 495 (978)
+++.+.++.|+.+|+|++++|+|.++.. .|.+ | .+..++.+|.||+|+|++.+|++||++++
T Consensus 650 ~dy~evl~~Yt~~GfRVIAlA~K~L~~~---~~~~----~-----------~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~ 711 (1140)
T KOG0208|consen 650 ADYQEVLKEYTHQGFRVIALASKELETS---TLQK----A-----------QKLSRDTVESNLEFLGLIVMENKLKEETK 711 (1140)
T ss_pred ccHHHHHHHHHhCCeEEEEEecCccCcc---hHHH----H-----------hhccHhhhhccceeeEEEEeecccccccH
Confidence 7889999999999999999999999875 2322 1 12234788999999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCccccc-----chhhhHHHHHHHHHHHHHHHHH
Q 002029 496 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTL-----EKSEDKSAAAAALKASVLHQLI 570 (978)
Q Consensus 496 ~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 570 (978)
.+|++|++|+|+++|+|||+..||+.+|++||++.+....+....+..+.... ...+....... .++..
T Consensus 712 ~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~------~~~~~ 785 (1140)
T KOG0208|consen 712 RVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLD------PKEPD 785 (1140)
T ss_pred HHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCC------CCccC
Confidence 99999999999999999999999999999999999987777665542221110 00000000000 00000
Q ss_pred hhhhhhc--cccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCC
Q 002029 571 RGKELLD--SSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 648 (978)
Q Consensus 571 ~~~~~~~--~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG 648 (978)
......+ .+......+.+.++|++++.+. ....+.+.+++.++. |||||+|.||+++|..+|+ .|..|+|+|||
T Consensus 786 ~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~-~~~~~l~~~Il~~~~--VfARMsP~qK~~Lie~lQk-l~y~VgfCGDG 861 (1140)
T KOG0208|consen 786 PDLASVKLSLDVLSEKDYHLAMSGKTFQVIL-EHFPELVPKILLKGT--VFARMSPDQKAELIEALQK-LGYKVGFCGDG 861 (1140)
T ss_pred ccccCCccChhhhccceeEEEecCchhHHHH-hhcHHHHHHHHhcCe--EEeecCchhHHHHHHHHHh-cCcEEEecCCC
Confidence 0000000 0111345689999999999888 456667777777666 9999999999999999998 99999999999
Q ss_pred cCCHHHhhhccccccccCCccchhccccceehh--chhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhh
Q 002029 649 ANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA--QFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYA 726 (978)
Q Consensus 649 ~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~--~f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~ 726 (978)
+|||.||++|||||+++.+| |.-||.|.-. +-+....+ +.+||..+..--..++|+-.+.+ ++|...++.
T Consensus 862 ANDCgALKaAdvGISLSeaE---ASvAApFTSk~~~I~cVp~v-IrEGRaALVTSf~~FkYMalYs~----iqFisv~~L 933 (1140)
T KOG0208|consen 862 ANDCGALKAADVGISLSEAE---ASVAAPFTSKTPSISCVPDV-IREGRAALVTSFACFKYMALYSA----IQFISVVFL 933 (1140)
T ss_pred cchhhhhhhcccCcchhhhh---HhhcCccccCCCchhhHhHH-HhhhhhhhhhhHHHHHHHHHHHH----HHHHhhhee
Confidence 99999999999999998887 7789999988 45556666 89999998877777777644432 333333222
Q ss_pred ccccccchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHH
Q 002029 727 SFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCI 806 (978)
Q Consensus 727 ~~s~~~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 806 (978)
.+ -...+++.|.+...++....-+++++.++ +..+....+|. ..+++.+.+...+++.++..++-+.+++
T Consensus 934 Y~-~~~nl~D~Qfl~iDLlii~pia~~m~~~~--a~~~L~~~rP~-------~~L~s~~~~~~l~~q~vli~l~q~i~~l 1003 (1140)
T KOG0208|consen 934 YL-INSNLGDLQFLFIDLLIITPIAVMMSRFD--ASDKLFPKRPP-------TNLLSKKILVPLLLQIVLICLVQWILTL 1003 (1140)
T ss_pred ee-ecccccchhhhhhHHHHHHHHHHHHccCc--HHHHhcCCCCC-------ccccccchhhhhHHHHHHHHHHHHhhhe
Confidence 22 33458899999999988755556665543 55444444443 5678888887777777777777776666
Q ss_pred Hhhccccc
Q 002029 807 HAMKQQAF 814 (978)
Q Consensus 807 ~~~~~~~~ 814 (978)
..-..+++
T Consensus 1004 ~~~~qpw~ 1011 (1140)
T KOG0208|consen 1004 IVEPQPWY 1011 (1140)
T ss_pred eeccccce
Confidence 65444443
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-61 Score=565.28 Aligned_cols=479 Identities=18% Similarity=0.220 Sum_probs=357.6
Q ss_pred EEEEEEC-----CccccC--CcC---ceeecCceeccCCeEEEEEEEeCccchh---ccccCCCCCCcCHHHHHHHHHHH
Q 002029 27 VGSLELE-----EQQYPL--TPQ---QLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKIIY 93 (978)
Q Consensus 27 ~G~~~~~-----~~~~pl--~~~---n~l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~~ 93 (978)
+|...+| ||+.|+ +.+ +-+++||.+.+ |++.++|+.||.+|.+ ....+.++.++||+|..++.+..
T Consensus 145 eG~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~-G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~ 223 (673)
T PRK14010 145 KGLATVDESAITGESAPVIKESGGDFDNVIGGTSVAS-DWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLM 223 (673)
T ss_pred EcceEEecchhcCCCCceeccCCCccCeeecCceeec-ceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHH
Confidence 4555554 899998 333 56999999997 9999999999999965 44456677788999988776654
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHH
Q 002029 94 FLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVK 173 (978)
Q Consensus 94 ~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~ 173 (978)
.+.++.++++ . +.++... |. .....+...+++.+++||++|+..++++.
T Consensus 224 ~l~ii~l~~~--~---~~~~~~~----------~~----------------~~~~~~~~~val~V~~IP~aL~~~~~~~~ 272 (673)
T PRK14010 224 TLTIIFLVVI--L---TMYPLAK----------FL----------------NFNLSIAMLIALAVCLIPTTIGGLLSAIG 272 (673)
T ss_pred HHhHHHHHHH--H---HHHHHHh----------hc----------------cHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 4433222111 1 1110000 00 00114556677777889999999888887
Q ss_pred HHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcC
Q 002029 174 ILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKG 253 (978)
Q Consensus 174 ~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~ 253 (978)
..++. +| +++++++|+.+.+|.||++|+||+|||||||+|++.+.++...+.
T Consensus 273 ~~g~~------r~----ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~------------------ 324 (673)
T PRK14010 273 IAGMD------RV----TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS------------------ 324 (673)
T ss_pred HHHHH------HH----hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC------------------
Confidence 77777 67 899999999999999999999999999999997766655431100
Q ss_pred CCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHH
Q 002029 254 SPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIA 333 (978)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~ 333 (978)
...++++.+.++|+.. +.||.+.|++++
T Consensus 325 --------------------------------------~~~~~ll~~a~~~~~~--------------s~~P~~~AIv~~ 352 (673)
T PRK14010 325 --------------------------------------SSFERLVKAAYESSIA--------------DDTPEGRSIVKL 352 (673)
T ss_pred --------------------------------------ccHHHHHHHHHHhcCC--------------CCChHHHHHHHH
Confidence 0112456666777632 249999999999
Q ss_pred HHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchh
Q 002029 334 ARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGRE 413 (978)
Q Consensus 334 a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~ 413 (978)
+++.|+.... .....+||++++|+|++.++ ++ .+.|||++.++++|...+..
T Consensus 353 a~~~~~~~~~-----------------------~~~~~~pF~~~~k~~gv~~~---g~--~i~kGa~~~il~~~~~~g~~ 404 (673)
T PRK14010 353 AYKQHIDLPQ-----------------------EVGEYIPFTAETRMSGVKFT---TR--EVYKGAPNSMVKRVKEAGGH 404 (673)
T ss_pred HHHcCCCchh-----------------------hhcceeccccccceeEEEEC---CE--EEEECCHHHHHHHhhhcCCC
Confidence 9987653210 01123799999999999753 33 45599999999999865433
Q ss_pred hHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCC
Q 002029 414 FEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNG 493 (978)
Q Consensus 414 ~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~ 493 (978)
...++.+..++++++|+|+++++ .|++++|+++++||+|+|
T Consensus 405 ~~~~~~~~~~~~a~~G~~~l~v~---------------------------------------~~~~~lG~i~l~Dp~R~~ 445 (673)
T PRK14010 405 IPVDLDALVKGVSKKGGTPLVVL---------------------------------------EDNEILGVIYLKDVIKDG 445 (673)
T ss_pred CchHHHHHHHHHHhCCCeEEEEE---------------------------------------ECCEEEEEEEeecCCcHH
Confidence 34456677788999999999987 477899999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhh
Q 002029 494 VPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGK 573 (978)
Q Consensus 494 v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (978)
++++|++||++||+++|+|||+..||.+||+++|+..
T Consensus 446 a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~------------------------------------------- 482 (673)
T PRK14010 446 LVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR------------------------------------------- 482 (673)
T ss_pred HHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce-------------------------------------------
Confidence 9999999999999999999999999999999999831
Q ss_pred hhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHH
Q 002029 574 ELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVG 653 (978)
Q Consensus 574 ~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ 653 (978)
+++|++|+||.++|+.+|+ .|++|+|+|||.||+|
T Consensus 483 --------------------------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtGDGvNDAP 517 (673)
T PRK14010 483 --------------------------------------------FVAECKPEDKINVIREEQA-KGHIVAMTGDGTNDAP 517 (673)
T ss_pred --------------------------------------------EEcCCCHHHHHHHHHHHHh-CCCEEEEECCChhhHH
Confidence 8999999999999999998 8999999999999999
Q ss_pred Hhhhcccccccc-CCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhcccc
Q 002029 654 MLQEADIGVGIS-GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSG 730 (978)
Q Consensus 654 ml~~AdvGI~i~-g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~ 730 (978)
+|++|||||+|+ |++. |+++||+++.| |..+..+ +.+||..|.|+++++.|.+..|+...+..+...|...+-+
T Consensus 518 ALa~ADVGIAMgsGTdv--AkeAADiVLldd~ls~Iv~a-v~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~~~~~~ 594 (673)
T PRK14010 518 ALAEANVGLAMNSGTMS--AKEAANLIDLDSNPTKLMEV-VLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMAAMPA 594 (673)
T ss_pred HHHhCCEEEEeCCCCHH--HHHhCCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHHHhccc
Confidence 999999999994 4444 99999999998 4458888 8999999999999999999999998887776555433322
Q ss_pred ccchh---------h-HHHHHHHHHHh--hhhHhhhhccccCCChHHhhhC-ccchhc
Q 002029 731 QPVYN---------D-WFLSLYNVFFT--SLPVIALGVFDQDVSARFCLKF-PLLYQE 775 (978)
Q Consensus 731 ~~~~~---------~-~~~~~~n~i~~--~~p~~~l~~~~~~~~~~~~~~~-P~ly~~ 775 (978)
...++ . ..-+.||.+.. .+|.-.-|+..++.+...++++ =-.|..
T Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (673)
T PRK14010 595 MNHLNIMHLHSPESAVLSALIFNALIIVLLIPIAMKGVKFKGASTQTILMKNMLVYGL 652 (673)
T ss_pred chhhccccCCChHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHhhCeEEecc
Confidence 11121 1 12245565432 2344444555555555554443 334433
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-59 Score=549.96 Aligned_cols=483 Identities=19% Similarity=0.249 Sum_probs=358.4
Q ss_pred EEEEEEC-----CccccC--CcCce---eecCceeccCCeEEEEEEEeCccchh---ccccCCCCCCcCHHHHHHHHHHH
Q 002029 27 VGSLELE-----EQQYPL--TPQQL---LLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKIIY 93 (978)
Q Consensus 27 ~G~~~~~-----~~~~pl--~~~n~---l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~~ 93 (978)
+|...+| ||+.|+ +.+.- +++||.+.+ |++.+.|+.+|.+|.+ ....+.++.++||+|+.++.+..
T Consensus 145 eG~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~-G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~ 223 (679)
T PRK01122 145 EGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLS-DWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLA 223 (679)
T ss_pred EccEEEEcccccCCCCceEeCCCCccCeEEeceEEEe-eeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHH
Confidence 4555554 899998 33333 999999997 9999999999999965 44455667778999999888776
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHH
Q 002029 94 FLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVK 173 (978)
Q Consensus 94 ~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~ 173 (978)
.++.+.++++++...+ ..|.+. . ..+...+++++++||++|+..++.+.
T Consensus 224 ~l~~i~l~~~~~~~~~-~~~~g~--------~----------------------~~l~~~iallV~aiP~alg~l~~~i~ 272 (679)
T PRK01122 224 GLTIIFLLVVATLPPF-AAYSGG--------A----------------------LSITVLVALLVCLIPTTIGGLLSAIG 272 (679)
T ss_pred hhhHHHHHHHHHHHHH-HHHhCc--------h----------------------HHHHHHHHHHHHcccchhhhHHHHHH
Confidence 6655444333322221 111110 0 15677789999999999988888777
Q ss_pred HHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcC
Q 002029 174 ILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKG 253 (978)
Q Consensus 174 ~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~ 253 (978)
..++. +| .++++++|+.+++|.||++|+||+|||||||+|+|++.+++..+..
T Consensus 273 i~g~~------r~----ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~----------------- 325 (679)
T PRK01122 273 IAGMD------RV----LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV----------------- 325 (679)
T ss_pred HHHHH------HH----hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC-----------------
Confidence 76666 66 8999999999999999999999999999999999999887532110
Q ss_pred CCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHH
Q 002029 254 SPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIA 333 (978)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~ 333 (978)
. .++++.+.++|+.. +.||...|++++
T Consensus 326 ------------------------------------~---~~~ll~~a~~~s~~--------------s~hP~~~AIv~~ 352 (679)
T PRK01122 326 ------------------------------------T---EEELADAAQLSSLA--------------DETPEGRSIVVL 352 (679)
T ss_pred ------------------------------------C---HHHHHHHHHHhcCC--------------CCCchHHHHHHH
Confidence 0 12456666777543 247999999999
Q ss_pred HHH-cCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccch
Q 002029 334 ARE-LGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGR 412 (978)
Q Consensus 334 a~~-~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~ 412 (978)
|++ .|+... +..++....+||++.+|+|++.+. | ..|+|||++.|++.|...+.
T Consensus 353 a~~~~~~~~~--------------------~~~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~~g~ 407 (679)
T PRK01122 353 AKQRFNLRER--------------------DLQSLHATFVPFSAQTRMSGVDLD---G--REIRKGAVDAIRRYVESNGG 407 (679)
T ss_pred HHhhcCCCch--------------------hhccccceeEeecCcCceEEEEEC---C--EEEEECCHHHHHHHHHhcCC
Confidence 987 343211 122456678899999998888653 3 57899999999999976554
Q ss_pred hhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCC
Q 002029 413 EFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQN 492 (978)
Q Consensus 413 ~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~ 492 (978)
...+++.+.+++++++|+|++++| .|++++|+++++|++|+
T Consensus 408 ~~~~~~~~~~~~~a~~G~~~l~va---------------------------------------~~~~~lG~i~l~D~~R~ 448 (679)
T PRK01122 408 HFPAELDAAVDEVARKGGTPLVVA---------------------------------------EDNRVLGVIYLKDIVKP 448 (679)
T ss_pred cChHHHHHHHHHHHhCCCcEEEEE---------------------------------------ECCeEEEEEEEeccCch
Confidence 556778888899999999999999 36789999999999999
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhh
Q 002029 493 GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRG 572 (978)
Q Consensus 493 ~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (978)
|++++|++||++||+++|+|||+..||.+||+++|+..
T Consensus 449 ~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~------------------------------------------ 486 (679)
T PRK01122 449 GIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------------------------------------ 486 (679)
T ss_pred hHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE------------------------------------------
Confidence 99999999999999999999999999999999999821
Q ss_pred hhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCH
Q 002029 573 KELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDV 652 (978)
Q Consensus 573 ~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~ 652 (978)
+++|++|+||.++|+.+|+ .|+.|+|+|||.||+
T Consensus 487 ---------------------------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtGDGvNDA 520 (679)
T PRK01122 487 ---------------------------------------------FLAEATPEDKLALIRQEQA-EGRLVAMTGDGTNDA 520 (679)
T ss_pred ---------------------------------------------EEccCCHHHHHHHHHHHHH-cCCeEEEECCCcchH
Confidence 8999999999999999998 899999999999999
Q ss_pred HHhhhcccccccc-CCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHH---HHHHHHHHHhh
Q 002029 653 GMLQEADIGVGIS-GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAF---GFTLFFFEAYA 726 (978)
Q Consensus 653 ~ml~~AdvGI~i~-g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~---~~~~~~~~~~~ 726 (978)
|||++|||||+|. |++. |+++||+++.| |..+..+ +.+||...-.-..+..|++..-++- +++.++...+.
T Consensus 521 PALa~ADVGIAMgsGTdv--AkeAADiVLldd~~s~Iv~a-v~~GR~~~~tr~~~~~f~~~n~~~~~~~i~p~~~~~~~~ 597 (679)
T PRK01122 521 PALAQADVGVAMNSGTQA--AKEAGNMVDLDSNPTKLIEV-VEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFAATYP 597 (679)
T ss_pred HHHHhCCEeEEeCCCCHH--HHHhCCEEEeCCCHHHHHHH-HHHHHHHHhhhHhhhhhhHHHHHHHHHHHHHHHHHhhCc
Confidence 9999999999994 3444 89999999998 4458888 8999999865555667776644543 33334433333
Q ss_pred cccc------ccchhh-HHHHHHHHHHh--hhhHhhhhccccCCChHHhhhC-ccchhcc
Q 002029 727 SFSG------QPVYND-WFLSLYNVFFT--SLPVIALGVFDQDVSARFCLKF-PLLYQEG 776 (978)
Q Consensus 727 ~~s~------~~~~~~-~~~~~~n~i~~--~~p~~~l~~~~~~~~~~~~~~~-P~ly~~~ 776 (978)
+... .+|.+. ..-+.||.+.. .+|.-.-|+-.++.+...++++ =-.|..|
T Consensus 598 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (679)
T PRK01122 598 QLNALNIMHLHSPQSAILSALIFNALIIVALIPLALKGVKYRPLSAAALLRRNLLIYGLG 657 (679)
T ss_pred cccccccccCCChHHHHHHHHHHHHHHHHHhHHHHhcCccccccCHHHHHhhceeEecCC
Confidence 2111 111111 22245665432 2344444555556665554443 3344433
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-56 Score=524.18 Aligned_cols=433 Identities=18% Similarity=0.229 Sum_probs=337.8
Q ss_pred EEEEEEC-----CccccC--CcCc---eeecCceeccCCeEEEEEEEeCccchh---ccccCCCCCCcCHHHHHHHHHHH
Q 002029 27 VGSLELE-----EQQYPL--TPQQ---LLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKIIY 93 (978)
Q Consensus 27 ~G~~~~~-----~~~~pl--~~~n---~l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~~ 93 (978)
+|...+| ||+.|+ +.+. .+++||.+.+ |++.+.|+.+|.+|.+ ....+.++.++||+|..++.+..
T Consensus 146 eG~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~-G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~ 224 (675)
T TIGR01497 146 EGVASVDESAITGESAPVIKESGGDFASVTGGTRILS-DWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLI 224 (675)
T ss_pred EccEEEEcccccCCCCceeecCCCCcceeecCcEEEe-eEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHH
Confidence 4555554 899998 3333 3999999997 9999999999999955 44456667778999999888776
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHH
Q 002029 94 FLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVK 173 (978)
Q Consensus 94 ~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~ 173 (978)
.+.++.++++++.+. +..|.+. ...+...+++++++||++|+.....+.
T Consensus 225 ~l~~v~li~~~~~~~-~~~~~~~------------------------------~~~~~~lvallV~aiP~aLg~l~~av~ 273 (675)
T TIGR01497 225 ALTLVFLLVTATLWP-FAAYGGN------------------------------AISVTVLVALLVCLIPTTIGGLLSAIG 273 (675)
T ss_pred HHHHHHHHHHHHHHH-HHHhcCh------------------------------hHHHHHHHHHHHHhCchhhhhHHHHHH
Confidence 654433333221111 1111100 013555688899999998766555555
Q ss_pred HHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcC
Q 002029 174 ILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKG 253 (978)
Q Consensus 174 ~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~ 253 (978)
..++. +| .++|+++|+...+|.||++|+||||||||||+|+|++.+++..+. .
T Consensus 274 iag~~------r~----ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-----~------------ 326 (675)
T TIGR01497 274 IAGMD------RV----LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG-----V------------ 326 (675)
T ss_pred HHHHH------HH----HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC-----C------------
Confidence 55555 66 899999999999999999999999999999999999998763210 0
Q ss_pred CCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHH
Q 002029 254 SPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIA 333 (978)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~ 333 (978)
..++++...++|+.. +.||.+.|++++
T Consensus 327 ---------------------------------------~~~~ll~~aa~~~~~--------------s~hP~a~Aiv~~ 353 (675)
T TIGR01497 327 ---------------------------------------DEKTLADAAQLASLA--------------DDTPEGKSIVIL 353 (675)
T ss_pred ---------------------------------------cHHHHHHHHHHhcCC--------------CCCcHHHHHHHH
Confidence 012456666777543 258999999999
Q ss_pred HHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchh
Q 002029 334 ARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGRE 413 (978)
Q Consensus 334 a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~ 413 (978)
|++.|..... ..++.....||++.+|+|++.+. +| ..++|||++.+++.|...+..
T Consensus 354 a~~~~~~~~~--------------------~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~ 409 (675)
T TIGR01497 354 AKQLGIREDD--------------------VQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGH 409 (675)
T ss_pred HHHcCCCccc--------------------cccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCC
Confidence 9987753211 12344567899999888777553 34 478999999999988755444
Q ss_pred hHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCC
Q 002029 414 FEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNG 493 (978)
Q Consensus 414 ~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~ 493 (978)
..+++.+.+++++++|+|++++|+ |.+++|+++++|++|+|
T Consensus 410 ~~~~~~~~~~~~a~~G~r~l~va~---------------------------------------~~~~lG~i~l~D~~Rp~ 450 (675)
T TIGR01497 410 IPTDLDQAVDQVARQGGTPLVVCE---------------------------------------DNRIYGVIYLKDIVKGG 450 (675)
T ss_pred CcHHHHHHHHHHHhCCCeEEEEEE---------------------------------------CCEEEEEEEecccchhH
Confidence 556778888999999999999993 45799999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhh
Q 002029 494 VPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGK 573 (978)
Q Consensus 494 v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (978)
++++|++|+++||+++|+|||+..||..+|+++|+..
T Consensus 451 a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~------------------------------------------- 487 (675)
T TIGR01497 451 IKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD------------------------------------------- 487 (675)
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE-------------------------------------------
Confidence 9999999999999999999999999999999999821
Q ss_pred hhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHH
Q 002029 574 ELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVG 653 (978)
Q Consensus 574 ~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ 653 (978)
+++|++|++|..+|+.+|+ .|+.|+|+|||.||+|
T Consensus 488 --------------------------------------------v~a~~~PedK~~~v~~lq~-~g~~VamvGDG~NDap 522 (675)
T TIGR01497 488 --------------------------------------------FIAEATPEDKIALIRQEQA-EGKLVAMTGDGTNDAP 522 (675)
T ss_pred --------------------------------------------EEcCCCHHHHHHHHHHHHH-cCCeEEEECCCcchHH
Confidence 7899999999999999998 7889999999999999
Q ss_pred HhhhccccccccCCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHH
Q 002029 654 MLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEA 724 (978)
Q Consensus 654 ml~~AdvGI~i~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 724 (978)
||++|||||+|.+. ...|+++||+++.| |..+..+ +.+||..+-....+..|++..+++-.|..+-..|
T Consensus 523 AL~~AdvGiAm~~g-t~~akeaadivLldd~~s~Iv~a-v~~GR~~~~t~~~~~t~~~~~~~~~~~~~~~~~~ 593 (675)
T TIGR01497 523 ALAQADVGVAMNSG-TQAAKEAANMVDLDSDPTKLIEV-VHIGKQLLITRGALTTFSIANDVAKYFAIIPAIF 593 (675)
T ss_pred HHHhCCEeEEeCCC-CHHHHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHheeeecccHHHHHHHHHHHH
Confidence 99999999999532 23389999999998 4448888 8999999999999999998888776555444333
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-53 Score=472.70 Aligned_cols=601 Identities=19% Similarity=0.261 Sum_probs=391.9
Q ss_pred cCceeecCceecc------------CCeEEEEEEEeCccch---hccccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Q 002029 41 PQQLLLRDSKLRN------------TDCIYGAVIFTGRDTK---VFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFI 105 (978)
Q Consensus 41 ~~n~l~~Gs~l~~------------tg~~~gvVv~tG~~Tk---i~~~~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i 105 (978)
+..++|.||++.. -|-++|.|++||.||. +++..--...+-|- . |+-...+++++++++++
T Consensus 334 k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTa--N--n~Etf~FILFLlVFAia 409 (1160)
T KOG0209|consen 334 KLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTA--N--NRETFIFILFLLVFAIA 409 (1160)
T ss_pred ceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeee--c--cHHHHHHHHHHHHHHHH
Confidence 4578999999875 2568999999999993 32221111111111 1 22233344445555554
Q ss_pred HHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccc
Q 002029 106 GSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLH 185 (978)
Q Consensus 106 ~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~ 185 (978)
++ +++|..... + +.+ +--..|+-...++...||.-||+-++++. .+..+ .
T Consensus 410 Aa--~Yvwv~Gsk-------------d------~~R---srYKL~LeC~LIlTSVvPpELPmELSmAV--NsSL~----A 459 (1160)
T KOG0209|consen 410 AA--GYVWVEGSK-------------D------PTR---SRYKLFLECTLILTSVVPPELPMELSMAV--NSSLI----A 459 (1160)
T ss_pred hh--heEEEeccc-------------C------cch---hhhheeeeeeEEEeccCCCCCchhhhHHH--HHHHH----H
Confidence 43 234442111 1 000 00114566677788999999999776654 44433 3
Q ss_pred cccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhh
Q 002029 186 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQE 265 (978)
Q Consensus 186 m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (978)
+ ++.++.|..+-.+.-.|+||+-|||||||||+..|.|..+.-... .....
T Consensus 460 L----ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~--~~~~~----------------------- 510 (1160)
T KOG0209|consen 460 L----AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSA--DEGAL----------------------- 510 (1160)
T ss_pred H----HHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccC--Ccccc-----------------------
Confidence 4 788999999999999999999999999999999999998642111 00000
Q ss_pred cccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeec
Q 002029 266 DKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERT 345 (978)
Q Consensus 266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~ 345 (978)
.+-.+.-.+-++++|.||+...-.++ .-|+|.|+|.+++ .||.+...+
T Consensus 511 ----------------------~~~s~~p~~t~~vlAscHsLv~le~~-------lVGDPlEKA~l~~---v~W~~~k~~ 558 (1160)
T KOG0209|consen 511 ----------------------TPASKAPNETVLVLASCHSLVLLEDK-------LVGDPLEKATLEA---VGWNLEKKN 558 (1160)
T ss_pred ----------------------cchhhCCchHHHHHHHHHHHHHhcCc-------ccCChHHHHHHHh---cCcccccCc
Confidence 00001112456899999998765433 3579999999876 567665422
Q ss_pred CceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCC----CeEEEEEeCCchHHHHHhcccchhhHHHHHHH
Q 002029 346 QTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE----GTLLLLSKGADSVMFERLAENGREFEEQTKEH 421 (978)
Q Consensus 346 ~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~----~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~ 421 (978)
. +..+. | .-...+|.+.+.|.|.-|||||+++..+ .+++..+|||||+|-+++.. .+..+.+.
T Consensus 559 ~--v~p~~-----~--~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d----vP~dY~~i 625 (1160)
T KOG0209|consen 559 S--VCPRE-----G--NGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD----VPKDYDEI 625 (1160)
T ss_pred c--cCCCc-----C--CCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh----CchhHHHH
Confidence 1 11110 0 1135778899999999999999998753 36899999999999998875 45567778
Q ss_pred HHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHH
Q 002029 422 INEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKL 501 (978)
Q Consensus 422 l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L 501 (978)
..+|+.+|.|||++|||.+.+--. .+.-+..++.+|+||+|.|.+.+.-|+|++++++|+.|
T Consensus 626 Yk~ytR~GsRVLALg~K~l~~~~~------------------~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el 687 (1160)
T KOG0209|consen 626 YKRYTRQGSRVLALGYKPLGDMMV------------------SQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKEL 687 (1160)
T ss_pred HHHHhhccceEEEEecccccccch------------------hhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHH
Confidence 889999999999999999974211 11112335788999999999999999999999999999
Q ss_pred HHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCccc-cc-chhhhHHHHHHHHHHHHHHHHHhhhhhhccc
Q 002029 502 AQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESK-TL-EKSEDKSAAAAALKASVLHQLIRGKELLDSS 579 (978)
Q Consensus 502 ~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (978)
++++.+++|+|||++.||.++|+++|++.....++.+..+..... .+ +.++... ..++..
T Consensus 688 ~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~------------------lp~~p~ 749 (1160)
T KOG0209|consen 688 NNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIV------------------LPLKPG 749 (1160)
T ss_pred hccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCcee------------------ecCCCC
Confidence 999999999999999999999999999887655554444321110 00 0000000 000000
Q ss_pred cC---CCCCeEEEEcCchhhhhchhh-HHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHh
Q 002029 580 NE---SLGPLALIIDGKSLTYALEDD-VKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGML 655 (978)
Q Consensus 580 ~~---~~~~~~lvi~G~~l~~~~~~~-~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml 655 (978)
+. -...+.+.++|..++++...+ +...+.+ +-||+|++|+||..++..+|+ .|+.++|+|||.||+.||
T Consensus 750 ~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~h------v~VfARvaP~QKE~ii~tlK~-~Gy~TLMCGDGTNDVGAL 822 (1160)
T KOG0209|consen 750 KKKTLLAETHDLCITGSALDHLQATDQLRRLIPH------VWVFARVAPKQKEFIITTLKK-LGYVTLMCGDGTNDVGAL 822 (1160)
T ss_pred ccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhh------eeEEEeeChhhHHHHHHHHHh-cCeEEEEecCCCcchhhh
Confidence 00 112456789999999888765 3333333 339999999999999999998 999999999999999999
Q ss_pred hhcccccccc-CCcc-----c-----------------------------------------------------------
Q 002029 656 QEADIGVGIS-GVEG-----M----------------------------------------------------------- 670 (978)
Q Consensus 656 ~~AdvGI~i~-g~e~-----~----------------------------------------------------------- 670 (978)
++|||||++- +.+. .
T Consensus 823 K~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p 902 (1160)
T KOG0209|consen 823 KQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDP 902 (1160)
T ss_pred hhcccceehhcCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCc
Confidence 9999999863 3110 0
Q ss_pred -----hhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHH
Q 002029 671 -----QAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYN 743 (978)
Q Consensus 671 -----~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n 743 (978)
+|..||.|.-.- -..+.+. +..||+..... ...+|-+++-.+...|+..-.+----=|.+.|.+.--
T Consensus 903 ~vKLGDASiAAPFTsK~asv~~v~~I-IrQGRctLVtT-----lQMfKILALN~LisAYslSvlyldGVKfgD~QaTisG 976 (1160)
T KOG0209|consen 903 LVKLGDASIAAPFTSKLASVSSVTHI-IRQGRCTLVTT-----LQMFKILALNCLISAYSLSVLYLDGVKFGDTQATISG 976 (1160)
T ss_pred cccccccccccccccccchHHHHHHH-HHhcchhHHHH-----HHHHHHHHHHHHHHHHHHHHhhhcCceecchhHhHHH
Confidence 012223332211 2334555 89999988664 3344544544444444433221111226777777766
Q ss_pred HHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002029 744 VFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHA 808 (978)
Q Consensus 744 ~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 808 (978)
+++ .+.++.+....+-+....++|. ..+||...+...+.+-.+|-...+++.--.
T Consensus 977 lLl---a~cFlfISrskPLetLSkeRP~-------~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a 1031 (1160)
T KOG0209|consen 977 LLL---AACFLFISRSKPLETLSKERPL-------PNIFNVYIILSVLLQFAVHIATLVYITGEA 1031 (1160)
T ss_pred HHH---HHHHhheecCCchhhHhhcCCC-------CCcchHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 553 3334434443344444444554 578999988888877777766655554443
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-52 Score=489.48 Aligned_cols=392 Identities=31% Similarity=0.442 Sum_probs=325.4
Q ss_pred CCccccC--CcCceeecCceeccCCeEEEEEEEeCccchh---ccccCCCCCCcCHHHHHHHHHH-HHHHHHHHHHHHHH
Q 002029 33 EEQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKII-YFLFGILVLMSFIG 106 (978)
Q Consensus 33 ~~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~-~~~~~~~~~~~~i~ 106 (978)
+||+.|+ .+++.+++|+.+.+ |.+...|+.+|.+|.. ..........++++++..+++. .+++++.++++++.
T Consensus 85 TGEs~pv~k~~g~~v~~gs~~~~-G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~ 163 (499)
T TIGR01494 85 TGESVPVLKTAGDAVFAGTYVFN-GTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAV 163 (499)
T ss_pred cCCCCCeeeccCCccccCcEEec-cEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4899988 55799999999998 9999999999999954 3333334454688999999998 67777666666666
Q ss_pred HHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhcccc
Q 002029 107 SIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHM 186 (978)
Q Consensus 107 ~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m 186 (978)
++++..+.... . .+...+.+++++++.+|||+|+++++++...+.. +|
T Consensus 164 ~~~~~~~~~~~------~--------------------~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~------~~ 211 (499)
T TIGR01494 164 FLFWAIGLWDP------N--------------------SIFKIFLRALILLVIAIPIALPLAVTIALAVGDA------RL 211 (499)
T ss_pred HHHHHHHHccc------c--------------------cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH------HH
Confidence 55443221100 0 1134788999999999999999999999998876 66
Q ss_pred ccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhc
Q 002029 187 YYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQED 266 (978)
Q Consensus 187 ~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (978)
.++++++|+++.+|+||+++++|||||||||+|+|+|+++++.+.
T Consensus 212 ----~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~------------------------------- 256 (499)
T TIGR01494 212 ----AKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG------------------------------- 256 (499)
T ss_pred ----HHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC-------------------------------
Confidence 778999999999999999999999999999999999999864321
Q ss_pred ccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecC
Q 002029 267 KASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQ 346 (978)
Q Consensus 267 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~ 346 (978)
++.++||+|.|++++++..+
T Consensus 257 ----------------------------------------------------~~~s~hp~~~ai~~~~~~~~-------- 276 (499)
T TIGR01494 257 ----------------------------------------------------EYLSGHPDERALVKSAKWKI-------- 276 (499)
T ss_pred ----------------------------------------------------CcCCCChHHHHHHHHhhhcC--------
Confidence 01246999999999886421
Q ss_pred ceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchhhHHHHHHHHHHHH
Q 002029 347 TSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYA 426 (978)
Q Consensus 347 ~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a 426 (978)
+...||++.+|+|+++++.+++ .|+||+++.+.++|.. ..+.++.++
T Consensus 277 ----------------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------~~~~~~~~~ 323 (499)
T TIGR01494 277 ----------------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------LEEKVKELA 323 (499)
T ss_pred ----------------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------HHHHHHHHH
Confidence 1356999999999999987444 4789999999988742 233455688
Q ss_pred HccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcCC
Q 002029 427 DAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGI 506 (978)
Q Consensus 427 ~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aGI 506 (978)
.+|+|++++|++. +++|+++++|++|++++++|+.|+++|+
T Consensus 324 ~~g~~~~~~a~~~---------------------------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi 364 (499)
T TIGR01494 324 QSGLRVLAVASKE---------------------------------------TLLGLLGLEDPLRDDAKETISELREAGI 364 (499)
T ss_pred hCCCEEEEEEECC---------------------------------------eEEEEEEecCCCchhHHHHHHHHHHCCC
Confidence 9999999999532 5999999999999999999999999999
Q ss_pred eEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCe
Q 002029 507 KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPL 586 (978)
Q Consensus 507 kv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (978)
++||+|||+..+|..+|+++|+
T Consensus 365 ~~~~ltGD~~~~a~~ia~~lgi---------------------------------------------------------- 386 (499)
T TIGR01494 365 RVIMLTGDNVLTAKAIAKELGI---------------------------------------------------------- 386 (499)
T ss_pred eEEEEcCCCHHHHHHHHHHcCc----------------------------------------------------------
Confidence 9999999999999999999873
Q ss_pred EEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhccccccccC
Q 002029 587 ALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISG 666 (978)
Q Consensus 587 ~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~g 666 (978)
++|++|++|.++|+.+|+ .|+.|+|+|||.||++|+++|||||++.
T Consensus 387 --------------------------------~~~~~p~~K~~~v~~l~~-~g~~v~~vGDg~nD~~al~~Advgia~~- 432 (499)
T TIGR01494 387 --------------------------------FARVTPEEKAALVEALQK-KGRVVAMTGDGVNDAPALKKADVGIAMG- 432 (499)
T ss_pred --------------------------------eeccCHHHHHHHHHHHHH-CCCEEEEECCChhhHHHHHhCCCccccc-
Confidence 477899999999999998 7899999999999999999999999994
Q ss_pred Cccchhccccceehhchhh--hHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHH
Q 002029 667 VEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFF 722 (978)
Q Consensus 667 ~e~~~a~~asD~vi~~f~~--l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~ 722 (978)
|+.+||+++.+++. +..+ +.+||..++++++++.|.+++|+..+.+.+++
T Consensus 433 -----a~~~adivl~~~~l~~i~~~-~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~ 484 (499)
T TIGR01494 433 -----AKAAADIVLLDDNLSTIVDA-LKEGRKTFSTIKSNIFWAIAYNLILIPLAALL 484 (499)
T ss_pred -----hHHhCCeEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67889999998544 5555 89999999999999999999999977666653
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-53 Score=466.34 Aligned_cols=462 Identities=20% Similarity=0.257 Sum_probs=353.2
Q ss_pred CccccC--CcCceeecCceeccCCeEEEEEEEeCccchhcccc--CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002029 34 EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNS--TGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIF 109 (978)
Q Consensus 34 ~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~~--~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~ 109 (978)
||+.|+ .+++-+|+||+++. |.+.+||++||.+|-.++.. .++.....++++-++.+..++++.+.+--++..++
T Consensus 187 GESLpvtKh~gd~vfSgSTcKq-GE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~IGn~ci~si~~g~lie~~v 265 (942)
T KOG0205|consen 187 GESLPVTKHPGDEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGIGNFCICSIALGMLIEITV 265 (942)
T ss_pred CCccccccCCCCceeccccccc-ceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 899998 77899999999998 99999999999999664432 23356678999999999988866443333322222
Q ss_pred HHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccc
Q 002029 110 FGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYE 189 (978)
Q Consensus 110 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~ 189 (978)
.+..+...+.. ..-+.+++++.-||++||..+++..++++. +|
T Consensus 266 my~~q~R~~r~----------------------------~i~nLlvllIGgiPiamPtVlsvTMAiGs~------rL--- 308 (942)
T KOG0205|consen 266 MYPIQHRLYRD----------------------------GIDNLLVLLIGGIPIAMPTVLSVTMAIGSH------RL--- 308 (942)
T ss_pred hhhhhhhhhhh----------------------------hhhheheeeecccccccceeeeehhhHHHH------HH---
Confidence 22222222110 233445566667999999999999999998 55
Q ss_pred cCCCcccccCcccccccccceEEEeeCCcccccCeeEEEE----EEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhh
Q 002029 190 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIK----CSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQE 265 (978)
Q Consensus 190 ~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~----~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (978)
++++++++.+.++|+|+.+|++|||||||||.|++++.+ ++..|..
T Consensus 309 -aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~----------------------------- 358 (942)
T KOG0205|consen 309 -SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVD----------------------------- 358 (942)
T ss_pred -HhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCC-----------------------------
Confidence 889999999999999999999999999999999999876 2222221
Q ss_pred cccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeec
Q 002029 266 DKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERT 345 (978)
Q Consensus 266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~ 345 (978)
+ .++++..|..+ .. ++.+..|.|+|...++=
T Consensus 359 -------------------------~---D~~~L~A~rAs--r~-----------en~DAID~A~v~~L~dP-------- 389 (942)
T KOG0205|consen 359 -------------------------K---DDVLLTAARAS--RK-----------ENQDAIDAAIVGMLADP-------- 389 (942)
T ss_pred -------------------------h---HHHHHHHHHHh--hh-----------cChhhHHHHHHHhhcCH--------
Confidence 0 12222223222 11 13578999999875431
Q ss_pred CceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchhhHHHHHHHHHHH
Q 002029 346 QTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEY 425 (978)
Q Consensus 346 ~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~ 425 (978)
+..+..|+.++.+|||+..||....+.+++|..+-.+||||+.|++.|+... +.++...+.+++|
T Consensus 390 --------------Keara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~-~i~~~vh~~id~~ 454 (942)
T KOG0205|consen 390 --------------KEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDH-DIPERVHSIIDKF 454 (942)
T ss_pred --------------HHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccC-cchHHHHHHHHHH
Confidence 0124779999999999999999999999999999999999999999998754 6888999999999
Q ss_pred HHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcC
Q 002029 426 ADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAG 505 (978)
Q Consensus 426 a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aG 505 (978)
|++|+|.|++|++..++..- +.-..-.+++|+.-+-||+|.+..++|.....-|
T Consensus 455 AeRGlRSLgVArq~v~e~~~--------------------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lG 508 (942)
T KOG0205|consen 455 AERGLRSLAVARQEVPEKTK--------------------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLG 508 (942)
T ss_pred HHhcchhhhhhhhccccccc--------------------------cCCCCCcccccccccCCCCccchHHHHHHHHhcc
Confidence 99999999999998876421 1113567899999999999999999999999999
Q ss_pred CeEEEEcCCChhhHHHHHHHcCccccCce---EEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCC
Q 002029 506 IKLWVLTGDKMETAINIGFACSLLRQGMR---QVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNES 582 (978)
Q Consensus 506 Ikv~mlTGD~~~tA~~ia~~~gl~~~~~~---~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (978)
..|.|+|||...-+...++.+|+-.+-.. ....+.++
T Consensus 509 v~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~---------------------------------------- 548 (942)
T KOG0205|consen 509 VNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDG---------------------------------------- 548 (942)
T ss_pred ceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCC----------------------------------------
Confidence 99999999999999999999998543211 00000000
Q ss_pred CCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhccccc
Q 002029 583 LGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGV 662 (978)
Q Consensus 583 ~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI 662 (978)
-+.|.......+ ++.-|+.+.|+||..+|+.+|+ +++.|+|+|||+||+|+++.||+||
T Consensus 549 ------~~~~~~v~elie--------------~adgfAgVfpehKy~iV~~Lq~-r~hi~gmtgdgvndapaLKkAdigi 607 (942)
T KOG0205|consen 549 ------SMPGSPVDELIE--------------KADGFAGVFPEHKYEIVKILQE-RKHIVGMTGDGVNDAPALKKADIGI 607 (942)
T ss_pred ------CCCCCcHHHHhh--------------hccCccccCHHHHHHHHHHHhh-cCceecccCCCcccchhhcccccce
Confidence 011111111111 3347899999999999999999 8999999999999999999999999
Q ss_pred cccCCccchhccccceehhchh--hhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHH
Q 002029 663 GISGVEGMQAVMSSDIAIAQFR--FLERLLLVHGHWCYRRISSMICYFFYKNIAFG 716 (978)
Q Consensus 663 ~i~g~e~~~a~~asD~vi~~f~--~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~ 716 (978)
++.+.... |..+||+|+..-. -+... +..+|.+|+|++.+..|.+.-.+-.+
T Consensus 608 ava~atda-ar~asdiVltepglSviI~a-vltSraIfqrmknytiyavsitiriv 661 (942)
T KOG0205|consen 608 AVADATDA-ARSASDIVLTEPGLSVIISA-VLTSRAIFQRMKNYTIYAVSITIRIV 661 (942)
T ss_pred eeccchhh-hcccccEEEcCCCchhhHHH-HHHHHHHHHHHhhheeeeehhHHHHH
Confidence 99766554 7889999999844 35556 78999999999999888877665544
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-50 Score=474.60 Aligned_cols=432 Identities=21% Similarity=0.259 Sum_probs=338.1
Q ss_pred EEEecCCCCCcce----eEEEEEEC-----CccccC--CcCceeecCceeccCCeEEEEEEEeCccchh---ccccCCCC
Q 002029 13 IIRCEDPNANLYT----FVGSLELE-----EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPP 78 (978)
Q Consensus 13 ~i~~e~p~~~l~~----f~G~~~~~-----~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~ 78 (978)
.+---+|.+.+-- -+|...+| ||+.|+ .+++.+++||.+.+ |.....|+.+|.||.+ ....++++
T Consensus 234 D~v~VrpGE~IPvDG~V~~G~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~-G~l~i~vt~~~~dt~la~Ii~LVe~Aq 312 (713)
T COG2217 234 DIVLVRPGERIPVDGVVVSGSSSVDESMLTGESLPVEKKPGDEVFAGTVNLD-GSLTIRVTRVGADTTLARIIRLVEEAQ 312 (713)
T ss_pred CEEEECCCCEecCCeEEEeCcEEeecchhhCCCCCEecCCCCEEeeeEEECC-ccEEEEEEecCccCHHHHHHHHHHHHh
Confidence 3444455555432 13344443 899997 88999999999997 9999999999999955 55567888
Q ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHh
Q 002029 79 SKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYG 158 (978)
Q Consensus 79 ~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~ 158 (978)
.+++|+|+..|++..++.++.++++++.+++|.++... .| -..+.+++++++
T Consensus 313 ~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~--------~~--------------------~~a~~~a~avLV 364 (713)
T COG2217 313 SSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGG--------DW--------------------ETALYRALAVLV 364 (713)
T ss_pred hCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC--------cH--------------------HHHHHHHHhhee
Confidence 99999999999999999998888888887755443321 12 226889999999
Q ss_pred ccccchhhhhHHHHHHHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeC
Q 002029 159 YLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYG 238 (978)
Q Consensus 159 ~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~ 238 (978)
..|||+|.++.+++.+.+.... .++|+++|+.+.+|.|+++|+|+||||||||+|++++..+...+. +
T Consensus 365 IaCPCALgLAtP~ai~~g~g~a----------A~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~ 432 (713)
T COG2217 365 IACPCALGLATPTAILVGIGRA----------ARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--D 432 (713)
T ss_pred eeCccHHHhHHHHHHHHHHHHH----------HhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--C
Confidence 9999999999999998887743 789999999999999999999999999999999999999864322 0
Q ss_pred CCchHHHHHHHhhcCCCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcE
Q 002029 239 RGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKI 318 (978)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~ 318 (978)
. .+++...+ + .
T Consensus 433 --e-----------------------------------------------------~~~L~laA-a-------------l 443 (713)
T COG2217 433 --E-----------------------------------------------------DELLALAA-A-------------L 443 (713)
T ss_pred --H-----------------------------------------------------HHHHHHHH-H-------------H
Confidence 0 12222222 1 1
Q ss_pred EEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeC
Q 002029 319 SYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKG 398 (978)
Q Consensus 319 ~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KG 398 (978)
+..++||..+|++++|++.|...... + ...+|. +|--+. +|+. +.-|
T Consensus 444 E~~S~HPiA~AIv~~a~~~~~~~~~~------~---~~i~G~---------------------Gv~~~v-~g~~--v~vG 490 (713)
T COG2217 444 EQHSEHPLAKAIVKAAAERGLPDVED------F---EEIPGR---------------------GVEAEV-DGER--VLVG 490 (713)
T ss_pred HhcCCChHHHHHHHHHHhcCCCCccc------e---eeeccC---------------------cEEEEE-CCEE--EEEc
Confidence 22467999999999999877211110 0 001111 111111 3432 2338
Q ss_pred CchHHHHHhcccchhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhccc
Q 002029 399 ADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNL 478 (978)
Q Consensus 399 a~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl 478 (978)
.+..+.+.-. .... .....+.+..+|..++.++ .|-
T Consensus 491 ~~~~~~~~~~----~~~~-~~~~~~~~~~~G~t~v~va---------------------------------------~dg 526 (713)
T COG2217 491 NARLLGEEGI----DLPL-LSERIEALESEGKTVVFVA---------------------------------------VDG 526 (713)
T ss_pred CHHHHhhcCC----Cccc-hhhhHHHHHhcCCeEEEEE---------------------------------------ECC
Confidence 8766543211 1111 5566778889999988888 466
Q ss_pred EEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHH
Q 002029 479 ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAA 558 (978)
Q Consensus 479 ~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~ 558 (978)
+++|+++++|++|++++++|++||+.||++.|||||+..+|..||+++||..
T Consensus 527 ~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~---------------------------- 578 (713)
T COG2217 527 KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE---------------------------- 578 (713)
T ss_pred EEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh----------------------------
Confidence 8999999999999999999999999999999999999999999999999821
Q ss_pred HHHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccC
Q 002029 559 AALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT 638 (978)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~ 638 (978)
+.+.+.|++|.++|+.+|+ .
T Consensus 579 -----------------------------------------------------------v~AellPedK~~~V~~l~~-~ 598 (713)
T COG2217 579 -----------------------------------------------------------VRAELLPEDKAEIVRELQA-E 598 (713)
T ss_pred -----------------------------------------------------------heccCCcHHHHHHHHHHHh-c
Confidence 8899999999999999997 8
Q ss_pred CCeEEEEcCCcCCHHHhhhcccccccc-CCccchhccccceehhch--hhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHH
Q 002029 639 SSTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDIAIAQF--RFLERLLLVHGHWCYRRISSMICYFFYKNIAF 715 (978)
Q Consensus 639 ~~~v~aiGDG~ND~~ml~~AdvGI~i~-g~e~~~a~~asD~vi~~f--~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~ 715 (978)
|++|+|+|||.||+|+|.+|||||+|. |++. |.++||+++++. +.+..+ +..+|..++++++++.|.|.+|.++
T Consensus 599 g~~VamVGDGINDAPALA~AdVGiAmG~GtDv--A~eaADvvL~~~dL~~v~~a-i~lsr~t~~~IkqNl~~A~~yn~~~ 675 (713)
T COG2217 599 GRKVAMVGDGINDAPALAAADVGIAMGSGTDV--AIEAADVVLMRDDLSAVPEA-IDLSRATRRIIKQNLFWAFGYNAIA 675 (713)
T ss_pred CCEEEEEeCCchhHHHHhhcCeeEeecCCcHH--HHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999995 4555 999999999984 447777 8999999999999999999999988
Q ss_pred HHHHHHH
Q 002029 716 GFTLFFF 722 (978)
Q Consensus 716 ~~~~~~~ 722 (978)
+.+..+.
T Consensus 676 iplA~~g 682 (713)
T COG2217 676 IPLAAGG 682 (713)
T ss_pred HHHHHHh
Confidence 7666544
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-47 Score=463.55 Aligned_cols=413 Identities=20% Similarity=0.219 Sum_probs=322.7
Q ss_pred EEEEEEC-----CccccC--CcCceeecCceeccCCeEEEEEEEeCccchh---ccccCCCCCCcCHHHHHHHHHHHHHH
Q 002029 27 VGSLELE-----EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKIIYFLF 96 (978)
Q Consensus 27 ~G~~~~~-----~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~~~~~ 96 (978)
+|...+| ||+.|+ .+++.+++||.+.+ |.+.+.|+.+|.+|.+ .....++..+++|+|+.++++..++.
T Consensus 283 ~g~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~-G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~ 361 (741)
T PRK11033 283 SPFASFDESALTGESIPVERATGEKVPAGATSVD-RLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYT 361 (741)
T ss_pred ECcEEeecccccCCCCCEecCCCCeeccCCEEcC-ceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 4555554 899998 66899999999998 9999999999999954 44456677788999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHH
Q 002029 97 GILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQ 176 (978)
Q Consensus 97 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~ 176 (978)
++.++++++.++++.++.+. +| ...+.+++++++..|||+|.++.+++....
T Consensus 362 ~~v~~~a~~~~~~~~~~~~~--------~~--------------------~~~i~~a~svlviacPcaL~latP~a~~~~ 413 (741)
T PRK11033 362 PAIMLVALLVILVPPLLFAA--------PW--------------------QEWIYRGLTLLLIGCPCALVISTPAAITSG 413 (741)
T ss_pred HHHHHHHHHHHHHHHHHccC--------CH--------------------HHHHHHHHHHHHHhchhhhhhhhHHHHHHH
Confidence 99999998887765333221 12 114677899999999999988887777666
Q ss_pred HHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCC
Q 002029 177 SIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPL 256 (978)
Q Consensus 177 ~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~ 256 (978)
.... +++|+++|+.+.+|.|+++++||||||||||+|+|++.++...+.. .
T Consensus 414 l~~a----------ar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-----~-------------- 464 (741)
T PRK11033 414 LAAA----------ARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI-----S-------------- 464 (741)
T ss_pred HHHH----------HHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC-----C--------------
Confidence 5533 6789999999999999999999999999999999999988632210 0
Q ss_pred ccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHH
Q 002029 257 EEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARE 336 (978)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~ 336 (978)
. ++++...+.. + ..+.||.++|+++++++
T Consensus 465 ----------------------------------~---~~~l~~aa~~-----e---------~~s~hPia~Ai~~~a~~ 493 (741)
T PRK11033 465 ----------------------------------E---SELLALAAAV-----E---------QGSTHPLAQAIVREAQV 493 (741)
T ss_pred ----------------------------------H---HHHHHHHHHH-----h---------cCCCCHHHHHHHHHHHh
Confidence 0 1222222211 1 12469999999999987
Q ss_pred cCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEE-EEE-eCCCeEEEEEeCCchHHHHHhcccchhh
Q 002029 337 LGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSV-IVR-SEEGTLLLLSKGADSVMFERLAENGREF 414 (978)
Q Consensus 337 ~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsv-iv~-~~~~~~~l~~KGa~~~i~~~~~~~~~~~ 414 (978)
.|.. +||.++++.+.- -++ .-+|+.+. -|+++.+.+ .
T Consensus 494 ~~~~-------------------------------~~~~~~~~~~~g~Gv~~~~~g~~~~--ig~~~~~~~-~------- 532 (741)
T PRK11033 494 RGLA-------------------------------IPEAESQRALAGSGIEGQVNGERVL--ICAPGKLPP-L------- 532 (741)
T ss_pred cCCC-------------------------------CCCCcceEEEeeEEEEEEECCEEEE--Eecchhhhh-c-------
Confidence 6532 345555555421 121 11444333 388887644 1
Q ss_pred HHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCCh
Q 002029 415 EEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGV 494 (978)
Q Consensus 415 ~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v 494 (978)
.+...+.++.+..+|+|++++| .|.+++|+++++|++|+|+
T Consensus 533 ~~~~~~~~~~~~~~g~~~v~va---------------------------------------~~~~~~g~i~l~d~~r~~a 573 (741)
T PRK11033 533 ADAFAGQINELESAGKTVVLVL---------------------------------------RNDDVLGLIALQDTLRADA 573 (741)
T ss_pred cHHHHHHHHHHHhCCCEEEEEE---------------------------------------ECCEEEEEEEEecCCchhH
Confidence 1334556678899999999999 3568999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhh
Q 002029 495 PECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKE 574 (978)
Q Consensus 495 ~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (978)
+++|++|+++|++++|+|||+..+|..+|+++||.
T Consensus 574 ~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~--------------------------------------------- 608 (741)
T PRK11033 574 RQAISELKALGIKGVMLTGDNPRAAAAIAGELGID--------------------------------------------- 608 (741)
T ss_pred HHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC---------------------------------------------
Confidence 99999999999999999999999999999999982
Q ss_pred hhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHH
Q 002029 575 LLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGM 654 (978)
Q Consensus 575 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~m 654 (978)
.+++..|++|..+|+.+++ . +.|+|+|||.||+||
T Consensus 609 -------------------------------------------~~~~~~p~~K~~~v~~l~~-~-~~v~mvGDgiNDapA 643 (741)
T PRK11033 609 -------------------------------------------FRAGLLPEDKVKAVTELNQ-H-APLAMVGDGINDAPA 643 (741)
T ss_pred -------------------------------------------eecCCCHHHHHHHHHHHhc-C-CCEEEEECCHHhHHH
Confidence 3456789999999999986 3 589999999999999
Q ss_pred hhhccccccccCCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHH
Q 002029 655 LQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 720 (978)
Q Consensus 655 l~~AdvGI~i~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~ 720 (978)
|++|||||++.+. ...++++||+++.+ +..+..+ +..||..+++|++++.|.+.+|.+++.+.+
T Consensus 644 l~~A~vgia~g~~-~~~a~~~adivl~~~~l~~l~~~-i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~ 709 (741)
T PRK11033 644 MKAASIGIAMGSG-TDVALETADAALTHNRLRGLAQM-IELSRATHANIRQNITIALGLKAIFLVTTL 709 (741)
T ss_pred HHhCCeeEEecCC-CHHHHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999532 33378999999986 4447766 899999999999999999999987665544
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-47 Score=435.25 Aligned_cols=438 Identities=20% Similarity=0.219 Sum_probs=338.8
Q ss_pred eEEEEEEC-----CccccC--CcCceeecCceeccCCeEEEEEEEeCccchh---ccccCCCCCCcCHHHHHHHHHHHHH
Q 002029 26 FVGSLELE-----EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKIIYFL 95 (978)
Q Consensus 26 f~G~~~~~-----~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~~~~ 95 (978)
.+|+-.+| ||++|+ .++..+.+||...| |..+.-++.+|.||.+ .+..++++..+.|+|+.+|+++.++
T Consensus 418 v~Gss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~n-G~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yF 496 (951)
T KOG0207|consen 418 VDGSSEVDESLITGESMPVPKKKGSTVIAGSINLN-GTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYF 496 (951)
T ss_pred EeCceeechhhccCCceecccCCCCeeeeeeecCC-ceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcC
Confidence 45666665 899998 78999999999998 9999999999999955 5556788888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHH
Q 002029 96 FGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKIL 175 (978)
Q Consensus 96 ~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~ 175 (978)
.++++++++..+++|.+..... .|| +..+...+...|..++.+++.+|||+|.++.+.+.+.
T Consensus 497 vP~Vi~lS~~t~~~w~~~g~~~-------~~~-----------~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmv 558 (951)
T KOG0207|consen 497 VPVVIVLSLATFVVWILIGKIV-------FKY-----------PRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMV 558 (951)
T ss_pred CchhhHHHHHHHHHHHHHcccc-------ccC-----------cchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEE
Confidence 9999999999888877655433 122 1111234456888999999999999999988877665
Q ss_pred HHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCC
Q 002029 176 QSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSP 255 (978)
Q Consensus 176 ~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~ 255 (978)
+.-.. +.+|+++|..+.+|.+.+|++|.||||||||+|++.+.++.+.+...
T Consensus 559 atgvg----------A~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~------------------ 610 (951)
T KOG0207|consen 559 ATGVG----------ATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPI------------------ 610 (951)
T ss_pred Eechh----------hhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcc------------------
Confidence 54422 67899999999999999999999999999999999999987544320
Q ss_pred CccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHH
Q 002029 256 LEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAAR 335 (978)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~ 335 (978)
..++++...+. .+-.++||...|++++|+
T Consensus 611 -------------------------------------~~~e~l~~v~a--------------~Es~SeHPig~AIv~yak 639 (951)
T KOG0207|consen 611 -------------------------------------SLKEALALVAA--------------MESGSEHPIGKAIVDYAK 639 (951)
T ss_pred -------------------------------------cHHHHHHHHHH--------------HhcCCcCchHHHHHHHHH
Confidence 01223222221 111357999999999999
Q ss_pred HcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchhhH
Q 002029 336 ELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFE 415 (978)
Q Consensus 336 ~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~ 415 (978)
+.+ ..++...+.... .|..+.+...+.+ ++.- .+-|.-+.|. +++....
T Consensus 640 ~~~-----~~~~~~~~~~~~-----------------~~pg~g~~~~~~~---~~~~--i~iGN~~~~~----r~~~~~~ 688 (951)
T KOG0207|consen 640 EKL-----VEPNPEGVLSFE-----------------YFPGEGIYVTVTV---DGNE--VLIGNKEWMS----RNGCSIP 688 (951)
T ss_pred hcc-----cccCccccceee-----------------cccCCCcccceEE---eeeE--EeechHHHHH----hcCCCCc
Confidence 876 111111111111 1222222211222 1221 2236654443 2333345
Q ss_pred HHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChH
Q 002029 416 EQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVP 495 (978)
Q Consensus 416 ~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~ 495 (978)
++++..+++-...|..+.++| -|-++.|+++++|++|+|+.
T Consensus 689 ~~i~~~~~~~e~~g~tvv~v~---------------------------------------vn~~l~gv~~l~D~vr~~a~ 729 (951)
T KOG0207|consen 689 DDILDALTESERKGQTVVYVA---------------------------------------VNGQLVGVFALEDQVRPDAA 729 (951)
T ss_pred hhHHHhhhhHhhcCceEEEEE---------------------------------------ECCEEEEEEEeccccchhHH
Confidence 567888888899999999999 47789999999999999999
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhh
Q 002029 496 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 575 (978)
Q Consensus 496 ~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (978)
.+|+.|++.||++.|||||+..+|.++|+++|+-
T Consensus 730 ~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~---------------------------------------------- 763 (951)
T KOG0207|consen 730 LAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID---------------------------------------------- 763 (951)
T ss_pred HHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc----------------------------------------------
Confidence 9999999999999999999999999999999951
Q ss_pred hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHh
Q 002029 576 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGML 655 (978)
Q Consensus 576 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml 655 (978)
.|+|.+.|+||++.|+.+|+ .+..|+|+|||.||+|+|
T Consensus 764 -----------------------------------------~V~aev~P~~K~~~Ik~lq~-~~~~VaMVGDGINDaPAL 801 (951)
T KOG0207|consen 764 -----------------------------------------NVYAEVLPEQKAEKIKEIQK-NGGPVAMVGDGINDAPAL 801 (951)
T ss_pred -----------------------------------------eEEeccCchhhHHHHHHHHh-cCCcEEEEeCCCCccHHH
Confidence 19999999999999999998 789999999999999999
Q ss_pred hhccccccccCCccchhccccceehhchh--hhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHH
Q 002029 656 QEADIGVGISGVEGMQAVMSSDIAIAQFR--FLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFF 721 (978)
Q Consensus 656 ~~AdvGI~i~g~e~~~a~~asD~vi~~f~--~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~ 721 (978)
.+|||||+|.... .-|.++||++++..+ .+... +..+|+..+|++.++.|.+.+|++.+.+...
T Consensus 802 A~AdVGIaig~gs-~vAieaADIVLmrn~L~~v~~a-i~LSrkt~~rIk~N~~~A~~yn~~~IpIAag 867 (951)
T KOG0207|consen 802 AQADVGIAIGAGS-DVAIEAADIVLMRNDLRDVPFA-IDLSRKTVKRIKLNFVWALIYNLVGIPIAAG 867 (951)
T ss_pred Hhhccceeecccc-HHHHhhCCEEEEccchhhhHHH-HHHHHHHHhhHHHHHHHHHHHHHhhhhhhee
Confidence 9999999994432 239999999999754 35555 7899999999999999999999987655443
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-46 Score=444.42 Aligned_cols=421 Identities=20% Similarity=0.245 Sum_probs=325.3
Q ss_pred EEEEEEC-----CccccC--CcCceeecCceeccCCeEEEEEEEeCccchhcc---ccCCCCCCcCHHHHHHHHHHHHHH
Q 002029 27 VGSLELE-----EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ---NSTGPPSKRSKVERRMDKIIYFLF 96 (978)
Q Consensus 27 ~G~~~~~-----~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~---~~~~~~~k~s~l~~~~n~~~~~~~ 96 (978)
+|...+| ||+.|+ .+++.+++||.+.+ |.++++|+.||.+|++.+ ....++.+++++++.+++++.++.
T Consensus 96 ~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~-g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~ 174 (556)
T TIGR01525 96 SGESEVDESALTGESMPVEKKEGDEVFAGTINGD-GSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYV 174 (556)
T ss_pred ecceEEeehhccCCCCCEecCCcCEEeeceEECC-ceEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Confidence 4555554 888887 77899999999997 999999999999996643 334456678999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHH
Q 002029 97 GILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQ 176 (978)
Q Consensus 97 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~ 176 (978)
++.++++++.++++.+.... ..+..++++++..||++|+++++++...+
T Consensus 175 ~~~l~~a~~~~~~~~~~~~~-------------------------------~~~~~~~~vlv~~~P~al~l~~~~~~~~~ 223 (556)
T TIGR01525 175 PAVLAIALLTFVVWLALGAL-------------------------------GALYRALAVLVVACPCALGLATPVAILVA 223 (556)
T ss_pred HHHHHHHHHHHHHHHHhccc-------------------------------hHHHHHHHHHhhccccchhehhHHHHHHH
Confidence 98888888776655432110 26888999999999999999999998888
Q ss_pred HHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCC
Q 002029 177 SIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPL 256 (978)
Q Consensus 177 ~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~ 256 (978)
.. +| .++++++|+++.+|.||++|++|||||||||+|+|++.++...+... .
T Consensus 224 ~~------~~----~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~---~--------------- 275 (556)
T TIGR01525 224 IG------VA----ARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS---I--------------- 275 (556)
T ss_pred HH------HH----HHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC---c---------------
Confidence 87 55 88999999999999999999999999999999999999886432210 0
Q ss_pred ccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHH
Q 002029 257 EEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARE 336 (978)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~ 336 (978)
. ..+++..++.+.. .+.||.+.|+++++++
T Consensus 276 ---------------------------------~---~~~~l~~a~~~e~--------------~~~hp~~~Ai~~~~~~ 305 (556)
T TIGR01525 276 ---------------------------------S---EEELLALAAALEQ--------------SSSHPLARAIVRYAKK 305 (556)
T ss_pred ---------------------------------c---HHHHHHHHHHHhc--------------cCCChHHHHHHHHHHh
Confidence 0 0122332222211 2369999999999998
Q ss_pred cCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchhhHH
Q 002029 337 LGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEE 416 (978)
Q Consensus 337 ~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~ 416 (978)
.|..... + + -...+ ..+++...+ +|. .-+..|+++.+ + . .. ....
T Consensus 306 ~~~~~~~--~-------------------~-~~~~~----~~~gi~~~~---~g~-~~~~lg~~~~~-~-~--~~-~~~~ 350 (556)
T TIGR01525 306 RGLELPK--Q-------------------E-DVEEV----PGKGVEATV---DGQ-EEVRIGNPRLL-E-L--AA-EPIS 350 (556)
T ss_pred cCCCccc--c-------------------c-CeeEe----cCCeEEEEE---CCe-eEEEEecHHHH-h-h--cC-CCch
Confidence 7653211 0 0 00001 122233222 231 12333776655 1 1 11 1122
Q ss_pred HHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHH
Q 002029 417 QTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPE 496 (978)
Q Consensus 417 ~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~ 496 (978)
+..+.++.++.+|+|++.+| .|.+++|.+.++|+++||+++
T Consensus 351 ~~~~~~~~~~~~g~~~~~v~---------------------------------------~~~~~~g~i~~~d~~~~g~~e 391 (556)
T TIGR01525 351 ASPDLLNEGESQGKTVVFVA---------------------------------------VDGELLGVIALRDQLRPEAKE 391 (556)
T ss_pred hhHHHHHHHhhCCcEEEEEE---------------------------------------ECCEEEEEEEecccchHhHHH
Confidence 33456778899999999999 466899999999999999999
Q ss_pred HHHHHHHcC-CeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhh
Q 002029 497 CIDKLAQAG-IKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 575 (978)
Q Consensus 497 ~I~~L~~aG-Ikv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (978)
+|+.|+++| ++++|+|||+..+|..+++++|+-.
T Consensus 392 ~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~--------------------------------------------- 426 (556)
T TIGR01525 392 AIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE--------------------------------------------- 426 (556)
T ss_pred HHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe---------------------------------------------
Confidence 999999999 9999999999999999999999821
Q ss_pred hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHh
Q 002029 576 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGML 655 (978)
Q Consensus 576 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml 655 (978)
+|+++.|++|..+++.+++ .++.|+|+|||.||++|+
T Consensus 427 ------------------------------------------~f~~~~p~~K~~~v~~l~~-~~~~v~~vGDg~nD~~al 463 (556)
T TIGR01525 427 ------------------------------------------VHAELLPEDKLAIVKELQE-EGGVVAMVGDGINDAPAL 463 (556)
T ss_pred ------------------------------------------eeccCCHHHHHHHHHHHHH-cCCEEEEEECChhHHHHH
Confidence 7788899999999999997 778999999999999999
Q ss_pred hhccccccccCCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHH
Q 002029 656 QEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFF 721 (978)
Q Consensus 656 ~~AdvGI~i~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~ 721 (978)
++|||||++.+ ....++..||+++.+ +..+..+ +..||..++++++++.|.+..|++.+.+.++
T Consensus 464 ~~A~vgia~g~-~~~~~~~~Ad~vi~~~~~~~l~~~-i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~ 529 (556)
T TIGR01525 464 AAADVGIAMGA-GSDVAIEAADIVLLNDDLSSLPTA-IDLSRKTRRIIKQNLAWALGYNLVAIPLAAG 529 (556)
T ss_pred hhCCEeEEeCC-CCHHHHHhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998853 333477899999995 6668888 8999999999999999999999988755543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-44 Score=424.59 Aligned_cols=401 Identities=19% Similarity=0.245 Sum_probs=312.7
Q ss_pred EEEEEEC-----CccccC--CcCceeecCceeccCCeEEEEEEEeCccchhc---cccCCCCCCcCHHHHHHHHHHHHHH
Q 002029 27 VGSLELE-----EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVF---QNSTGPPSKRSKVERRMDKIIYFLF 96 (978)
Q Consensus 27 ~G~~~~~-----~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~~~~n~~~~~~~ 96 (978)
+|...+| ||+.|+ .+++.+|+||.+.+ |.++++|+.||.+|.+. .....++.+++++++.+++++.++.
T Consensus 95 ~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~-G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (536)
T TIGR01512 95 SGTSTVDESALTGESVPVEKAPGDEVFAGAINLD-GVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYT 173 (536)
T ss_pred eCcEEEEecccCCCCCcEEeCCCCEEEeeeEECC-ceEEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHH
Confidence 4545554 888887 77899999999997 99999999999999664 3344556678999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHH
Q 002029 97 GILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQ 176 (978)
Q Consensus 97 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~ 176 (978)
++.++++++.++.+.+... | ...+.+++++++.+|||+|+++++++...+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~----------~--------------------~~~~~~~~svlv~~~P~aL~la~~~~~~~~ 223 (536)
T TIGR01512 174 PVVLAIALAIWLVPGLLKR----------W--------------------PFWVYRALVLLVVASPCALVISAPAAYLSA 223 (536)
T ss_pred HHHHHHHHHHHHHHHHhcc----------c--------------------HHHHHHHHHHHhhcCccccccchHHHHHHH
Confidence 9888888776655432211 1 115778899999999999999999999888
Q ss_pred HHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCC
Q 002029 177 SIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPL 256 (978)
Q Consensus 177 ~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~ 256 (978)
.. +| .++++++|+++.+|.||+++++|||||||||+|+|++.++...
T Consensus 224 ~~------~~----~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~----------------------- 270 (536)
T TIGR01512 224 IS------AA----ARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA----------------------- 270 (536)
T ss_pred HH------HH----HHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH-----------------------
Confidence 77 55 8899999999999999999999999999999999999876310
Q ss_pred ccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHH
Q 002029 257 EEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARE 336 (978)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~ 336 (978)
+++...+.+. . .+.||.+.|+++++++
T Consensus 271 ---------------------------------------~~l~~a~~~e-----~---------~~~hp~~~Ai~~~~~~ 297 (536)
T TIGR01512 271 ---------------------------------------EVLRLAAAAE-----Q---------ASSHPLARAIVDYARK 297 (536)
T ss_pred ---------------------------------------HHHHHHHHHh-----c---------cCCCcHHHHHHHHHHh
Confidence 1222222111 1 2369999999999987
Q ss_pred cCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchhhHH
Q 002029 337 LGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEE 416 (978)
Q Consensus 337 ~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~ 416 (978)
.+ .+ ... ..+| .+.+...+ +|..++ .|+++.+.+. +
T Consensus 298 ~~-~~----------------------~~~---~~~~----g~gi~~~~---~g~~~~--ig~~~~~~~~----~----- 333 (536)
T TIGR01512 298 RE-NV----------------------ESV---EEVP----GEGVRAVV---DGGEVR--IGNPRSLEAA----V----- 333 (536)
T ss_pred cC-CC----------------------cce---EEec----CCeEEEEE---CCeEEE--EcCHHHHhhc----C-----
Confidence 64 10 000 0111 12222222 333222 3776544221 1
Q ss_pred HHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHH
Q 002029 417 QTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPE 496 (978)
Q Consensus 417 ~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~ 496 (978)
...+..+|.+++.++ .|..++|.+.++|++|||+++
T Consensus 334 -----~~~~~~~~~~~~~v~---------------------------------------~~~~~~g~i~~~d~l~~~~~e 369 (536)
T TIGR01512 334 -----GARPESAGKTIVHVA---------------------------------------RDGTYLGYILLSDEPRPDAAE 369 (536)
T ss_pred -----CcchhhCCCeEEEEE---------------------------------------ECCEEEEEEEEeccchHHHHH
Confidence 014567788887776 577899999999999999999
Q ss_pred HHHHHHHcCC-eEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhh
Q 002029 497 CIDKLAQAGI-KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 575 (978)
Q Consensus 497 ~I~~L~~aGI-kv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (978)
+|+.|+++|+ +++|+|||+..+|..+++++|+..
T Consensus 370 ~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~--------------------------------------------- 404 (536)
T TIGR01512 370 AIAELKALGIEKVVMLTGDRRAVAERVARELGIDE--------------------------------------------- 404 (536)
T ss_pred HHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh---------------------------------------------
Confidence 9999999999 999999999999999999999821
Q ss_pred hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHh
Q 002029 576 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGML 655 (978)
Q Consensus 576 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml 655 (978)
+|+++.|++|..+++.+++ .++.|+|+|||.||++|+
T Consensus 405 ------------------------------------------~f~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al 441 (536)
T TIGR01512 405 ------------------------------------------VHAELLPEDKLEIVKELRE-KYGPVAMVGDGINDAPAL 441 (536)
T ss_pred ------------------------------------------hhhccCcHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHH
Confidence 5678889999999999997 788999999999999999
Q ss_pred hhccccccccCCccchhccccceehh--chhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHH
Q 002029 656 QEADIGVGISGVEGMQAVMSSDIAIA--QFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFF 721 (978)
Q Consensus 656 ~~AdvGI~i~g~e~~~a~~asD~vi~--~f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~ 721 (978)
++||+||++.......++.+||+++. ++..+..+ +..||..++++++++.|.+.+|++.+.+.++
T Consensus 442 ~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~-i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~ 508 (536)
T TIGR01512 442 AAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQA-IRLARRTRRIVKQNVVIALGIILLLILLALF 508 (536)
T ss_pred HhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999852223347889999994 57778887 8999999999999999999999887666554
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-44 Score=424.19 Aligned_cols=404 Identities=21% Similarity=0.279 Sum_probs=315.2
Q ss_pred EEEEEEC-----CccccC--CcCceeecCceeccCCeEEEEEEEeCccchh---ccccCCCCCCcCHHHHHHHHHHHHHH
Q 002029 27 VGSLELE-----EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKIIYFLF 96 (978)
Q Consensus 27 ~G~~~~~-----~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~~~~~ 96 (978)
+|...+| ||+.|+ .+++.+|+||.+.+ |.+++.|+.||.+|.+ ......++.+++++++.+++++.++.
T Consensus 132 ~g~~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~-g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~ 210 (562)
T TIGR01511 132 EGESEVDESLVTGESLPVPKKVGDPVIAGTVNGT-GSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFV 210 (562)
T ss_pred ECceEEehHhhcCCCCcEEcCCCCEEEeeeEECC-ceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 3444554 898887 77899999999997 9999999999999965 44445666778999999999999998
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHH
Q 002029 97 GILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQ 176 (978)
Q Consensus 97 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~ 176 (978)
++.++++++.+++|. ..+.+++++++..|||+|+++++++...+
T Consensus 211 ~~v~~~a~~~~~~~~------------------------------------~~~~~~~svlvvacPcaL~la~p~a~~~~ 254 (562)
T TIGR01511 211 PVVIAIALITFVIWL------------------------------------FALEFAVTVLIIACPCALGLATPTVIAVA 254 (562)
T ss_pred HHHHHHHHHHHHHHH------------------------------------HHHHHHHHHHHHhccchhhhHHHHHHHHH
Confidence 888887776654431 15778999999999999999999999888
Q ss_pred HHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCC
Q 002029 177 SIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPL 256 (978)
Q Consensus 177 ~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~ 256 (978)
.. ++ +++|+++|+.+.+|.|+++|+||||||||||+|+|++.++...+..
T Consensus 255 ~~------~a----a~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~-------------------- 304 (562)
T TIGR01511 255 TG------LA----AKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR-------------------- 304 (562)
T ss_pred HH------HH----HHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC--------------------
Confidence 77 44 7899999999999999999999999999999999999987532210
Q ss_pred ccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHH
Q 002029 257 EEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARE 336 (978)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~ 336 (978)
.. ++++..++.+. ..+.||.+.|+++++++
T Consensus 305 ---------------------------------~~---~~~l~~aa~~e--------------~~s~HPia~Ai~~~~~~ 334 (562)
T TIGR01511 305 ---------------------------------DR---TELLALAAALE--------------AGSEHPLAKAIVSYAKE 334 (562)
T ss_pred ---------------------------------CH---HHHHHHHHHHh--------------ccCCChHHHHHHHHHHh
Confidence 00 12233222111 12369999999999988
Q ss_pred cCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchhhHH
Q 002029 337 LGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEE 416 (978)
Q Consensus 337 ~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~ 416 (978)
.|.....- ..++ .+ ..+.+...+ +|+ -+..|+++.+.+. +..
T Consensus 335 ~~~~~~~~-------------------~~~~---~~----~g~Gi~~~~---~g~--~~~iG~~~~~~~~----~~~--- 376 (562)
T TIGR01511 335 KGITLVEV-------------------SDFK---AI----PGIGVEGTV---EGT--KIQLGNEKLLGEN----AIK--- 376 (562)
T ss_pred cCCCcCCC-------------------CCeE---EE----CCceEEEEE---CCE--EEEEECHHHHHhC----CCC---
Confidence 76532110 0110 01 122333332 232 2345888775331 111
Q ss_pred HHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHH
Q 002029 417 QTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPE 496 (978)
Q Consensus 417 ~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~ 496 (978)
+..+..+|.+++.++ .|.+++|.++++|++||++++
T Consensus 377 -----~~~~~~~g~~~~~~~---------------------------------------~~~~~~g~~~~~d~l~~~a~e 412 (562)
T TIGR01511 377 -----IDGKAEQGSTSVLVA---------------------------------------VNGELAGVFALEDQLRPEAKE 412 (562)
T ss_pred -----CChhhhCCCEEEEEE---------------------------------------ECCEEEEEEEecccccHHHHH
Confidence 112357899998887 577899999999999999999
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhh
Q 002029 497 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 576 (978)
Q Consensus 497 ~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (978)
+|+.|++.|++++|+|||+..+|..+++++|+-
T Consensus 413 ~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~----------------------------------------------- 445 (562)
T TIGR01511 413 VIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN----------------------------------------------- 445 (562)
T ss_pred HHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-----------------------------------------------
Confidence 999999999999999999999999999999971
Q ss_pred ccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhh
Q 002029 577 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 656 (978)
Q Consensus 577 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~ 656 (978)
+++++.|++|..+++.+++ .++.|+|+|||.||++|++
T Consensus 446 -----------------------------------------~~~~~~p~~K~~~v~~l~~-~~~~v~~VGDg~nD~~al~ 483 (562)
T TIGR01511 446 -----------------------------------------VRAEVLPDDKAALIKELQE-KGRVVAMVGDGINDAPALA 483 (562)
T ss_pred -----------------------------------------EEccCChHHHHHHHHHHHH-cCCEEEEEeCCCccHHHHh
Confidence 4567789999999999998 7889999999999999999
Q ss_pred hccccccccCCccchhccccceehh--chhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHH
Q 002029 657 EADIGVGISGVEGMQAVMSSDIAIA--QFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 720 (978)
Q Consensus 657 ~AdvGI~i~g~e~~~a~~asD~vi~--~f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~ 720 (978)
+|||||++... ...++.+||+++. +.+.+..+ +..||..++++++++.|.+..|++.+.+.+
T Consensus 484 ~A~vgia~g~g-~~~a~~~Advvl~~~~l~~l~~~-i~lsr~~~~~i~qn~~~a~~~n~~~i~la~ 547 (562)
T TIGR01511 484 QADVGIAIGAG-TDVAIEAADVVLMRNDLNDVATA-IDLSRKTLRRIKQNLLWAFGYNVIAIPIAA 547 (562)
T ss_pred hCCEEEEeCCc-CHHHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988532 2337889999997 46668888 899999999999999999999998765554
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-43 Score=434.68 Aligned_cols=418 Identities=18% Similarity=0.210 Sum_probs=323.9
Q ss_pred EEEEEEC-----CccccC--CcCceeecCceeccCCeEEEEEEEeCccchh---ccccCCCCCCcCHHHHHHHHHHHHHH
Q 002029 27 VGSLELE-----EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKIIYFLF 96 (978)
Q Consensus 27 ~G~~~~~-----~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~~~~~ 96 (978)
+|...+| ||+.|+ .+++.+++||.+.+ |.+.+.|+.+|.+|.+ ....++++..++++++.++++..++.
T Consensus 363 ~g~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~-G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v 441 (834)
T PRK10671 363 QGEAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQD-GSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFV 441 (834)
T ss_pred EceEEEeehhhcCCCCCEecCCCCEEEecceecc-eeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHH
Confidence 4555554 899887 77899999999997 9999999999999955 34445566678999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHH
Q 002029 97 GILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQ 176 (978)
Q Consensus 97 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~ 176 (978)
++.++++++.+++|.+. +.. ..+...+..++++++.+|||+|+++++++.+.+
T Consensus 442 ~~v~~~a~~~~~~~~~~-~~~--------------------------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~ 494 (834)
T PRK10671 442 PVVVVIALVSAAIWYFF-GPA--------------------------PQIVYTLVIATTVLIIACPCALGLATPMSIISG 494 (834)
T ss_pred HHHHHHHHHHHHHHHHh-CCc--------------------------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHH
Confidence 88888888776665432 110 011336778999999999999999999999888
Q ss_pred HHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCC
Q 002029 177 SIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPL 256 (978)
Q Consensus 177 ~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~ 256 (978)
.. ++ +++|+++|+.+.+|.||+++++|||||||||+|+|++.++...+.. .
T Consensus 495 ~~------~~----a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-----~-------------- 545 (834)
T PRK10671 495 VG------RA----AEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV-----D-------------- 545 (834)
T ss_pred HH------HH----HHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC-----C--------------
Confidence 87 45 8899999999999999999999999999999999999887532210 0
Q ss_pred ccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHH-HHhhhcceeccccCCCCcEEEecCCccHHHHHHHHH
Q 002029 257 EEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLR-LLAICHTALPEVDEENGKISYEAESPDEAAFVIAAR 335 (978)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~ 335 (978)
. ++++. +.+++. .+.||.+.|+++++.
T Consensus 546 ----------------------------------~---~~~l~~a~~~e~---------------~s~hp~a~Ai~~~~~ 573 (834)
T PRK10671 546 ----------------------------------E---AQALRLAAALEQ---------------GSSHPLARAILDKAG 573 (834)
T ss_pred ----------------------------------H---HHHHHHHHHHhC---------------CCCCHHHHHHHHHHh
Confidence 0 11222 223321 136999999999886
Q ss_pred HcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchhhH
Q 002029 336 ELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFE 415 (978)
Q Consensus 336 ~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~ 415 (978)
..+... + ..++... .+.+... . +|.. +.+|+++.+.+.. ...
T Consensus 574 ~~~~~~---------~------------~~~~~~~-------g~Gv~~~--~-~g~~--~~~G~~~~~~~~~-----~~~ 615 (834)
T PRK10671 574 DMTLPQ---------V------------NGFRTLR-------GLGVSGE--A-EGHA--LLLGNQALLNEQQ-----VDT 615 (834)
T ss_pred hCCCCC---------c------------ccceEec-------ceEEEEE--E-CCEE--EEEeCHHHHHHcC-----CCh
Confidence 432100 0 1111000 1112222 1 3433 3459988764311 112
Q ss_pred HHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChH
Q 002029 416 EQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVP 495 (978)
Q Consensus 416 ~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~ 495 (978)
+.+...++.++.+|.+++++|+ |..++|+++++|++||+++
T Consensus 616 ~~~~~~~~~~~~~g~~~v~va~---------------------------------------~~~~~g~~~l~d~~r~~a~ 656 (834)
T PRK10671 616 KALEAEITAQASQGATPVLLAV---------------------------------------DGKAAALLAIRDPLRSDSV 656 (834)
T ss_pred HHHHHHHHHHHhCCCeEEEEEE---------------------------------------CCEEEEEEEccCcchhhHH
Confidence 4456667788999999999993 4569999999999999999
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhh
Q 002029 496 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 575 (978)
Q Consensus 496 ~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (978)
++|+.|++.|++++|+|||+..+|..+++++|+..
T Consensus 657 ~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~--------------------------------------------- 691 (834)
T PRK10671 657 AALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE--------------------------------------------- 691 (834)
T ss_pred HHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE---------------------------------------------
Confidence 99999999999999999999999999999999821
Q ss_pred hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHh
Q 002029 576 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGML 655 (978)
Q Consensus 576 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml 655 (978)
+++++.|++|.++++.++. .++.|+|+|||.||++|+
T Consensus 692 ------------------------------------------~~~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al 728 (834)
T PRK10671 692 ------------------------------------------VIAGVLPDGKAEAIKRLQS-QGRQVAMVGDGINDAPAL 728 (834)
T ss_pred ------------------------------------------EEeCCCHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHH
Confidence 7788899999999999997 788999999999999999
Q ss_pred hhccccccccCCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHH
Q 002029 656 QEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 720 (978)
Q Consensus 656 ~~AdvGI~i~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~ 720 (978)
++||+||++.+ ....++++||+++.+ +..+..+ +..||..++++++++.|.+.+|++.+.+.+
T Consensus 729 ~~Agvgia~g~-g~~~a~~~ad~vl~~~~~~~i~~~-i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 729 AQADVGIAMGG-GSDVAIETAAITLMRHSLMGVADA-LAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HhCCeeEEecC-CCHHHHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999954 333488999999986 5557777 899999999999999999999988765543
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-37 Score=329.18 Aligned_cols=422 Identities=20% Similarity=0.242 Sum_probs=310.0
Q ss_pred eEEEEEEC-----CccccC--CcC---ceeecCceeccCCeEEEEEEEeCccc---hhccccCCCCCCcCHHHHHHHHHH
Q 002029 26 FVGSLELE-----EQQYPL--TPQ---QLLLRDSKLRNTDCIYGAVIFTGRDT---KVFQNSTGPPSKRSKVERRMDKII 92 (978)
Q Consensus 26 f~G~~~~~-----~~~~pl--~~~---n~l~~Gs~l~~tg~~~gvVv~tG~~T---ki~~~~~~~~~k~s~l~~~~n~~~ 92 (978)
-+|...+| ||+-|+ +.+ .-+-.||.+.+ +|+...++..-.+| |+....+.+.+++||-|-.++.+.
T Consensus 144 IeG~asVdESAITGESaPViresGgD~ssVtGgT~v~S-D~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL 222 (681)
T COG2216 144 IEGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLS-DWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILL 222 (681)
T ss_pred EeeeeecchhhccCCCcceeeccCCCcccccCCcEEee-eeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHH
Confidence 36766665 888887 333 56899999996 99999999998888 555667788888999888887766
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHH
Q 002029 93 YFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIV 172 (978)
Q Consensus 93 ~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~ 172 (978)
..+.++.++ ++....-+..|.+.. -......+.|++++||..+.--++.
T Consensus 223 ~~LTliFL~-~~~Tl~p~a~y~~g~-----------------------------~~~i~~LiALlV~LIPTTIGgLLsA- 271 (681)
T COG2216 223 SGLTLIFLL-AVATLYPFAIYSGGG-----------------------------AASVTVLVALLVCLIPTTIGGLLSA- 271 (681)
T ss_pred HHHHHHHHH-HHHhhhhHHHHcCCC-----------------------------CcCHHHHHHHHHHHhcccHHHHHHH-
Confidence 555432222 221111111222100 0135566788999999987664333
Q ss_pred HHHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhc
Q 002029 173 KILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRK 252 (978)
Q Consensus 173 ~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~ 252 (978)
..|.-..|+ .+-++++++..++|..|.||++..|||||+|-|+-.-.++...+.
T Consensus 272 -----IGIAGMdRv----~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~g----------------- 325 (681)
T COG2216 272 -----IGIAGMDRV----TQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPG----------------- 325 (681)
T ss_pred -----hhhhhhhHh----hhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCC-----------------
Confidence 333222366 888999999999999999999999999999987755444332111
Q ss_pred CCCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHH
Q 002029 253 GSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVI 332 (978)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~ 332 (978)
-..+++..+..+++-. .+.|.-..+|+
T Consensus 326 ---------------------------------------v~~~~la~aa~lsSl~--------------DeTpEGrSIV~ 352 (681)
T COG2216 326 ---------------------------------------VSEEELADAAQLASLA--------------DETPEGRSIVE 352 (681)
T ss_pred ---------------------------------------CCHHHHHHHHHHhhhc--------------cCCCCcccHHH
Confidence 0123445555444322 24788889999
Q ss_pred HHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccch
Q 002029 333 AARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGR 412 (978)
Q Consensus 333 ~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~ 412 (978)
.|++.|+....+.. . ..-..+||+.+.|+.++-.. ++ .-+-|||.+.|.......+.
T Consensus 353 LA~~~~~~~~~~~~-----------------~--~~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~~~g 409 (681)
T COG2216 353 LAKKLGIELREDDL-----------------Q--SHAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRERGG 409 (681)
T ss_pred HHHHhccCCCcccc-----------------c--ccceeeecceecccccccCC--CC--ceeecccHHHHHHHHHhcCC
Confidence 99999865533210 0 02345899988766666543 33 56779999999999887666
Q ss_pred hhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCC
Q 002029 413 EFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQN 492 (978)
Q Consensus 413 ~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~ 492 (978)
...+++....++-++.|=..|+++ .|-.++|++.++|-+++
T Consensus 410 ~~p~~l~~~~~~vs~~GGTPL~V~---------------------------------------~~~~~~GVI~LkDivK~ 450 (681)
T COG2216 410 HIPEDLDAAVDEVSRLGGTPLVVV---------------------------------------ENGRILGVIYLKDIVKP 450 (681)
T ss_pred CCCHHHHHHHHHHHhcCCCceEEE---------------------------------------ECCEEEEEEEehhhcch
Confidence 688899999999999999999999 57789999999999999
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhh
Q 002029 493 GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRG 572 (978)
Q Consensus 493 ~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (978)
|.+|-+++||+.|||.+|+|||++.||..||.+.|+..
T Consensus 451 Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd------------------------------------------ 488 (681)
T COG2216 451 GIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------------------------------------ 488 (681)
T ss_pred hHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh------------------------------------------
Confidence 99999999999999999999999999999999999721
Q ss_pred hhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCH
Q 002029 573 KELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDV 652 (978)
Q Consensus 573 ~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~ 652 (978)
..++++|++|..+|+.-|. .|+.|+|+|||.||+
T Consensus 489 ---------------------------------------------fiAeatPEdK~~~I~~eQ~-~grlVAMtGDGTNDA 522 (681)
T COG2216 489 ---------------------------------------------FIAEATPEDKLALIRQEQA-EGRLVAMTGDGTNDA 522 (681)
T ss_pred ---------------------------------------------hhhcCChHHHHHHHHHHHh-cCcEEEEcCCCCCcc
Confidence 5688999999999999998 899999999999999
Q ss_pred HHhhhccccccccCCccchhccccceehhchhh--hHHHHHHhhhhhhhHhhHhHHHHHH
Q 002029 653 GMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFY 710 (978)
Q Consensus 653 ~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~~--l~~lll~~gR~~~~~i~~~i~~~~~ 710 (978)
|+|.+||||++|...... |+++++++=.|-+. |... +.-|++..-.=..+..|++.
T Consensus 523 PALAqAdVg~AMNsGTqA-AkEAaNMVDLDS~PTKliev-V~IGKqlLiTRGaLTTFSIA 580 (681)
T COG2216 523 PALAQADVGVAMNSGTQA-AKEAANMVDLDSNPTKLIEV-VEIGKQLLITRGALTTFSIA 580 (681)
T ss_pred hhhhhcchhhhhccccHH-HHHhhcccccCCCccceehH-hhhhhhheeecccceeeehh
Confidence 999999999999433322 89999999777443 4444 56676655333333334433
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.1e-22 Score=208.71 Aligned_cols=97 Identities=33% Similarity=0.532 Sum_probs=90.3
Q ss_pred ccEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHH
Q 002029 477 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSA 556 (978)
Q Consensus 477 dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 556 (978)
++.++|.+.+.|++|++++++|+.|+++|++++|+|||+..+|..+|+++||.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~--------------------------- 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF--------------------------- 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---------------------------
Confidence 77899999999999999999999999999999999999999999999999982
Q ss_pred HHHHHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeC--CchhH--HHHHH
Q 002029 557 AAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS--SPKQK--ALVTR 632 (978)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~--sP~qK--~~iV~ 632 (978)
+..+++++ +|++| .++++
T Consensus 168 ----------------------------------------------------------~~~v~a~~~~kP~~k~~~~~i~ 189 (215)
T PF00702_consen 168 ----------------------------------------------------------DSIVFARVIGKPEPKIFLRIIK 189 (215)
T ss_dssp ----------------------------------------------------------SEEEEESHETTTHHHHHHHHHH
T ss_pred ----------------------------------------------------------cccccccccccccchhHHHHHH
Confidence 23489999 99999 99999
Q ss_pred HHHccCCCeEEEEcCCcCCHHHhhhcc
Q 002029 633 LVKTKTSSTTLAIGDGANDVGMLQEAD 659 (978)
Q Consensus 633 ~lk~~~~~~v~aiGDG~ND~~ml~~Ad 659 (978)
.++. .+..|+|+|||.||++|+++||
T Consensus 190 ~l~~-~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 190 ELQV-KPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHTC-TGGGEEEEESSGGHHHHHHHSS
T ss_pred HHhc-CCCEEEEEccCHHHHHHHHhCc
Confidence 9986 4569999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.1e-15 Score=131.18 Aligned_cols=90 Identities=33% Similarity=0.554 Sum_probs=71.3
Q ss_pred hhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceE
Q 002029 302 AICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRM 381 (978)
Q Consensus 302 alC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 381 (978)
+|||++....+++.+..+ ..|+|+|.||++++.+.|..+.. ...+..|++++++||||+||||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~----------------~~~~~~~~~~~~~pF~S~rK~m 63 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDI----------------KEIRSKYKIVAEIPFDSERKRM 63 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcH----------------HHHHhhcceeEEEccCccccee
Confidence 589999886555433322 45799999999999999754321 1134789999999999999999
Q ss_pred EEEEEeCCCeEEEEEeCCchHHHHHhcc
Q 002029 382 SVIVRSEEGTLLLLSKGADSVMFERLAE 409 (978)
Q Consensus 382 sviv~~~~~~~~l~~KGa~~~i~~~~~~ 409 (978)
+|+++ .++.+++|+|||||.|+++|+.
T Consensus 64 svv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 64 SVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999 3446788999999999999974
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.5e-14 Score=125.79 Aligned_cols=126 Identities=24% Similarity=0.398 Sum_probs=109.3
Q ss_pred cEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHH
Q 002029 478 LILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAA 557 (978)
Q Consensus 478 l~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~ 557 (978)
..+.+.++---++-++|+++|++|++. ++|++.|||..-+....|.-.|+-..
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 567888888999999999999999999 99999999999999999998886321
Q ss_pred HHHHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHcc
Q 002029 558 AAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK 637 (978)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~ 637 (978)
.+++...|+.|+.+++.|++
T Consensus 72 -----------------------------------------------------------rv~a~a~~e~K~~ii~eLkk- 91 (152)
T COG4087 72 -----------------------------------------------------------RVFAGADPEMKAKIIRELKK- 91 (152)
T ss_pred -----------------------------------------------------------eeecccCHHHHHHHHHHhcC-
Confidence 18888999999999999998
Q ss_pred CCCeEEEEcCCcCCHHHhhhccccccccCCccch--hccccceehhchhhhHHHH
Q 002029 638 TSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQ--AVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 638 ~~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~--a~~asD~vi~~f~~l~~ll 690 (978)
+++.|.|+|||+||.+||++||+||..-++++.. +..+||+++.+-+.+..++
T Consensus 92 ~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 92 RYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred CCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 8999999999999999999999999654555532 4479999999977766664
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.9e-12 Score=135.15 Aligned_cols=140 Identities=24% Similarity=0.333 Sum_probs=109.0
Q ss_pred EEEEEC-----CccccC--C-----cCceeecCceeccCCeEEEEEEEeCccchhccc---cCCCCCCcCHHHHHHHHHH
Q 002029 28 GSLELE-----EQQYPL--T-----PQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQN---STGPPSKRSKVERRMDKII 92 (978)
Q Consensus 28 G~~~~~-----~~~~pl--~-----~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~---~~~~~~k~s~l~~~~n~~~ 92 (978)
|.+.+| ||+.|+ . .+|++++||.+.+ |+++|+|++||.+|++.++ ...++.+++++++.++++.
T Consensus 76 g~~~vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~-g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (230)
T PF00122_consen 76 GSAYVDESALTGESEPVKKTPLPLNPGNIIFAGSIVVS-GWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIA 154 (230)
T ss_dssp SEEEEECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEE-EEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccchhhccccccc-cccccccceeeecccccccccccccccccchhhhhhhHHHH
Confidence 666665 777765 5 8999999999995 9999999999999976433 3456667899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHH
Q 002029 93 YFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIV 172 (978)
Q Consensus 93 ~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~ 172 (978)
.+++++.+++++++++++.++.. . ..|+ ..+..++.+++.++|++|++++++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~--------------------~~~~~~i~~l~~~~P~~l~~~~~~~ 207 (230)
T PF00122_consen 155 KILIIIILAIAILVFIIWFFNDS-G------ISFF--------------------KSFLFAISLLIVLIPCALPLALPLS 207 (230)
T ss_dssp HHHHHHHHHHHHHHHHHCHTGST-T------CHCC--------------------HHHHHHHHHHHHHS-TTHHHHHHHH
T ss_pred HHHHhcccccchhhhccceeccc-c------cccc--------------------cccccccceeeeecccceeehHHHH
Confidence 99998888888877655443211 0 1232 2688889999999999999999999
Q ss_pred HHHHHHHHhhccccccccCCCcccccCcccccc
Q 002029 173 KILQSIFINQDLHMYYEETDKPARARTSNLNEE 205 (978)
Q Consensus 173 ~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~ 205 (978)
...++. +| .++++++|+++++|+
T Consensus 208 ~~~~~~------~~----~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 208 LAIAAR------RL----AKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHH------HH----HHTTEEESSTTHHHH
T ss_pred HHHHHH------HH----HHCCEEEeCcccccC
Confidence 999988 55 789999999999884
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.4e-11 Score=125.78 Aligned_cols=173 Identities=13% Similarity=0.082 Sum_probs=127.0
Q ss_pred cchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 002029 732 PVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQ 811 (978)
Q Consensus 732 ~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 811 (978)
.++++.|++|.|++.+.+|+++++.++ ++++.+.+.|+ ++++++++.+.+...+..|+++++++++.+++....
T Consensus 2 ~Pl~~~qiL~inli~d~~~a~al~~e~--~~~~im~r~Pr----~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~ 75 (182)
T PF00689_consen 2 LPLTPIQILWINLITDLLPALALGFEP--PDPDIMKRPPR----DPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI 75 (182)
T ss_dssp -SS-HHHHHHHHHTTTHHHHHHGGGSS---STTGGGS-------TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhcCc--chhhhhhcccc----ccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 358999999999999999999999864 45556666665 688899999999999999999999999888776542
Q ss_pred ccccCCCceehhhHHHHHHHHHHHHHHHHHHHHhhcc--------hhhHHHHHHHHHHHHHHHHHHHHhccCccccchhH
Q 002029 812 QAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTY--------FTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAY 883 (978)
Q Consensus 812 ~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~~~~~~--------~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~ 883 (978)
......+...+....+|++|+++++.+.+... ..|+ ..+..|..++.++++.++++++..++|. ++.
T Consensus 76 ~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~-~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~-~~~--- 150 (182)
T PF00689_consen 76 FGWDEETNNDNLAQAQTMAFTALVLSQLFNAF-NCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPG-LNR--- 150 (182)
T ss_dssp TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHH-HTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTT-HHH---
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHhhhc-ccccccccceecccccccchHHHHHHHHHHHHHHHhcchh-hHh---
Confidence 11111111112446789999999998877754 3333 2345778889999999999999999984 343
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHH
Q 002029 884 KVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAI 917 (978)
Q Consensus 884 ~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~ 917 (978)
+++..+.++..|+.+++.+++.++.+++.|++
T Consensus 151 --~f~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 151 --IFGTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp --HST----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred --hhcccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 56677889999999999999999999999975
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=3.7e-09 Score=115.20 Aligned_cols=198 Identities=15% Similarity=0.120 Sum_probs=107.4
Q ss_pred ccEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc-------cccCceEEEE--ecCCCcccc
Q 002029 477 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL-------LRQGMRQVII--SSETPESKT 547 (978)
Q Consensus 477 dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl-------~~~~~~~i~i--~~~~~~~~~ 547 (978)
|.||+.- ..++-+.+.++|++|+++|+++++.||+....+..+.+++++ +..|+..+.- +++......
T Consensus 11 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~~i~~~~ 87 (270)
T PRK10513 11 DGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGETVAQTA 87 (270)
T ss_pred CCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCCEEEecC
Confidence 4555532 235788899999999999999999999999999999999986 3344444432 121122222
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHh-------------------hhhhhcc------ccCCC--CCeEEEEcCchhhhhch
Q 002029 548 LEKSEDKSAAAAALKASVLHQLIR-------------------GKELLDS------SNESL--GPLALIIDGKSLTYALE 600 (978)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~------~~~~~--~~~~lvi~G~~l~~~~~ 600 (978)
++.+.....++............. ....... ..... ....+++..+.- +
T Consensus 88 l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~---~- 163 (270)
T PRK10513 88 LSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPEI---L- 163 (270)
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHHH---H-
Confidence 333222222211111010000000 0000000 00000 000111111100 0
Q ss_pred hhHHHHHHHHH-hccC----eeEEEeCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccc
Q 002029 601 DDVKDLFLELA-IGCA----SVICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGM 670 (978)
Q Consensus 601 ~~~~~~f~~l~-~~~~----~vi~~r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~ 670 (978)
+++...+.... .... ..-+..++|. .|+.-++.+.++.| +.|+++|||.||.+||+.|++||+|.+.. .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~-~ 242 (270)
T PRK10513 164 DAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAI-P 242 (270)
T ss_pred HHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCcc-H
Confidence 01111121110 0010 0113345554 79999998887655 67999999999999999999999996554 3
Q ss_pred hhccccceehhc
Q 002029 671 QAVMSSDIAIAQ 682 (978)
Q Consensus 671 ~a~~asD~vi~~ 682 (978)
.++.+||++..+
T Consensus 243 ~vK~~A~~vt~~ 254 (270)
T PRK10513 243 SVKEVAQFVTKS 254 (270)
T ss_pred HHHHhcCeeccC
Confidence 489999999865
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.6e-08 Score=105.57 Aligned_cols=189 Identities=17% Similarity=0.186 Sum_probs=105.6
Q ss_pred ccc-cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc----ccCceEEEEecCCCcccccchhhhHHHHHHHH
Q 002029 487 EDK-LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVIISSETPESKTLEKSEDKSAAAAAL 561 (978)
Q Consensus 487 eD~-lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~----~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 561 (978)
.|. +.+.+.++|+++++.|+++.++||++...+..+.+++++- ..++..+...++......++.+..........
T Consensus 17 ~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~ 96 (264)
T COG0561 17 SNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLE 96 (264)
T ss_pred CCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHH
Confidence 444 8899999999999999999999999999999999999874 34555444443322233333333332222221
Q ss_pred HH-HHHHHHHhhhh-----hh--cccc-CC-------------CCC-eEEEEcCchhhhhchhhHHHHHHHHHhcc--Ce
Q 002029 562 KA-SVLHQLIRGKE-----LL--DSSN-ES-------------LGP-LALIIDGKSLTYALEDDVKDLFLELAIGC--AS 616 (978)
Q Consensus 562 ~~-~~~~~~~~~~~-----~~--~~~~-~~-------------~~~-~~lvi~G~~l~~~~~~~~~~~f~~l~~~~--~~ 616 (978)
.. ........... .. .... .. ... ..+.++- ..+.+.+....+...+ ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~ 170 (264)
T COG0561 97 DFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDK------DHEILEELVEALRKRFPDLG 170 (264)
T ss_pred hccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEec------ChHhHHHHHHHHhhhccccc
Confidence 11 00000000000 00 0000 00 000 0000000 0011111111121111 12
Q ss_pred eEEEeC-------Cch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 617 VICCRS-------SPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 617 vi~~r~-------sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
..+.+. .|. +|+..++.+.+..| ..|+|+|||.||.+||+.|+.||+|.+. ...++..||++...
T Consensus 171 ~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na-~~~~k~~A~~vt~~ 247 (264)
T COG0561 171 LTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA-DEELKELADYVTTS 247 (264)
T ss_pred eEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC-CHHHHhhCCcccCC
Confidence 333333 333 79999998887655 4599999999999999999999999766 44589999966444
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=9.3e-09 Score=112.15 Aligned_cols=199 Identities=17% Similarity=0.119 Sum_probs=107.6
Q ss_pred ccEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc----cccCceEEEE-ecCCCcccccchh
Q 002029 477 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVII-SSETPESKTLEKS 551 (978)
Q Consensus 477 dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl----~~~~~~~i~i-~~~~~~~~~~~~~ 551 (978)
|.||+.- ...+.+.+.++|++|+++|+++.+.||+....+..+.+++++ +..++..+.- +++......++.+
T Consensus 10 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~ 86 (272)
T PRK15126 10 DGTLLMP---DHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPAD 86 (272)
T ss_pred CCcCcCC---CCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHH
Confidence 4555531 235888999999999999999999999999999999999886 3334444331 2211222233333
Q ss_pred hhHHHHHHHHHHHHH---------------HHHHhhhh--h--hcc---c-cCCCCCeEEEEcCchhhhhchhhHHHHHH
Q 002029 552 EDKSAAAAALKASVL---------------HQLIRGKE--L--LDS---S-NESLGPLALIIDGKSLTYALEDDVKDLFL 608 (978)
Q Consensus 552 ~~~~~~~~~~~~~~~---------------~~~~~~~~--~--~~~---~-~~~~~~~~lvi~G~~l~~~~~~~~~~~f~ 608 (978)
...+.++........ ........ . ... . ........+.+-+.. .. + +++...+.
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~-~~-~-~~~~~~l~ 163 (272)
T PRK15126 87 VAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDH-DD-L-TRLQIQLN 163 (272)
T ss_pred HHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCH-HH-H-HHHHHHHH
Confidence 333333221111000 00000000 0 000 0 000001111111111 00 0 11222221
Q ss_pred HHHh-ccC----eeEEEeCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccce
Q 002029 609 ELAI-GCA----SVICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI 678 (978)
Q Consensus 609 ~l~~-~~~----~vi~~r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~ 678 (978)
.... ... ..-+..++|. .|+.-++.+.+..| ..|+++|||.||++||+.|+.||+|.+.. .+++.+||+
T Consensus 164 ~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~-~~vK~~A~~ 242 (272)
T PRK15126 164 EALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAM-PQLRAELPH 242 (272)
T ss_pred HHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCCh-HHHHHhCCC
Confidence 1100 001 0123456666 69999999987655 67999999999999999999999996554 348888886
Q ss_pred --ehhc
Q 002029 679 --AIAQ 682 (978)
Q Consensus 679 --vi~~ 682 (978)
+..+
T Consensus 243 ~~v~~~ 248 (272)
T PRK15126 243 LPVIGH 248 (272)
T ss_pred CeecCC
Confidence 5443
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.75 E-value=7.9e-08 Score=99.65 Aligned_cols=112 Identities=22% Similarity=0.251 Sum_probs=86.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
.++.+++.+.++.++++|.+||++||-...-+..+|+.+|+-..-...+..+..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC--------------------------
Confidence 789999999999999999999999999999999999999995543333222210
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCC---CeEEE
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLA 644 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~---~~v~a 644 (978)
.++|. ++.-.+..+.|...++.+.+..| +.+.|
T Consensus 130 ---------------------~ltG~-----------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a 165 (212)
T COG0560 130 ---------------------KLTGR-----------------------VVGPICDGEGKAKALRELAAELGIPLEETVA 165 (212)
T ss_pred ---------------------EEece-----------------------eeeeecCcchHHHHHHHHHHHcCCCHHHeEE
Confidence 12222 23334455789988866665445 46999
Q ss_pred EcCCcCCHHHhhhccccccccCCcc
Q 002029 645 IGDGANDVGMLQEADIGVGISGVEG 669 (978)
Q Consensus 645 iGDG~ND~~ml~~AdvGI~i~g~e~ 669 (978)
+|||.||.|||+.|+.+|++.....
T Consensus 166 ~gDs~nDlpml~~ag~~ia~n~~~~ 190 (212)
T COG0560 166 YGDSANDLPMLEAAGLPIAVNPKPK 190 (212)
T ss_pred EcCchhhHHHHHhCCCCeEeCcCHH
Confidence 9999999999999999999977654
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.69 E-value=6.5e-08 Score=99.80 Aligned_cols=126 Identities=19% Similarity=0.147 Sum_probs=91.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.|++.+.|+.+++.| ++.++||-....+..+++.+|+-.--+..+.++...
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--------------------------
Confidence 58999999999999975 999999999999999999999842111111111100
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCC
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 648 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG 648 (978)
.++|. .. ..+..|..+++.+++ .+..+.++|||
T Consensus 121 --------------------~~tG~------------------------~~--~~~~~K~~~l~~l~~-~~~~~v~vGDs 153 (203)
T TIGR02137 121 --------------------RVVGY------------------------QL--RQKDPKRQSVIAFKS-LYYRVIAAGDS 153 (203)
T ss_pred --------------------eeECe------------------------ee--cCcchHHHHHHHHHh-hCCCEEEEeCC
Confidence 11111 11 346789999999976 67789999999
Q ss_pred cCCHHHhhhccccccccCCccchhccccceehhc-hhhhHHH
Q 002029 649 ANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ-FRFLERL 689 (978)
Q Consensus 649 ~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~-f~~l~~l 689 (978)
.||.+|++.|++||++..++.. ...+-|+.... +..|..+
T Consensus 154 ~nDl~ml~~Ag~~ia~~ak~~~-~~~~~~~~~~~~~~~~~~~ 194 (203)
T TIGR02137 154 YNDTTMLSEAHAGILFHAPENV-IREFPQFPAVHTYEDLKRE 194 (203)
T ss_pred HHHHHHHHhCCCCEEecCCHHH-HHhCCCCCcccCHHHHHHH
Confidence 9999999999999999888774 33444655443 5555555
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.8e-08 Score=108.08 Aligned_cols=190 Identities=15% Similarity=0.116 Sum_probs=102.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc----cccCceEEEE-ecCCCcccccchhhhHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVII-SSETPESKTLEKSEDKSAAAAALKA 563 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl----~~~~~~~i~i-~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (978)
++.+.+.++|++++++|+++.+.||+....+..+.+.+++ +..++..+.- +++......++.+...+.+......
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~~~~ 98 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRDIASDLFGVVHDN 98 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHHHHHHHHHhhccc
Confidence 4788899999999999999999999999999999999886 3334443331 1211222233333333322211110
Q ss_pred -HHHHHHHhhh------------hhhccc----------c-C-CCCCeEEEEcCchhhhhchhhHHHHHHHHH-hccC--
Q 002029 564 -SVLHQLIRGK------------ELLDSS----------N-E-SLGPLALIIDGKSLTYALEDDVKDLFLELA-IGCA-- 615 (978)
Q Consensus 564 -~~~~~~~~~~------------~~~~~~----------~-~-~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~-~~~~-- 615 (978)
.....+.... ...... . . ......++..++. .. + +.+.+.+.... ....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~-~~-~-~~~~~~l~~~~~~~~~~~ 175 (266)
T PRK10976 99 PDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSH-EK-L-LPLEQAINARWGDRVNVS 175 (266)
T ss_pred CCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCH-HH-H-HHHHHHHHHHhCCcEEEE
Confidence 0000000000 000000 0 0 0000111111110 00 0 01112221110 0011
Q ss_pred --eeEEEeCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccc--eehhc
Q 002029 616 --SVICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD--IAIAQ 682 (978)
Q Consensus 616 --~vi~~r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD--~vi~~ 682 (978)
..-+..+.|. .|+..++.+.++.| +.|+++|||.||.+||+.|+.||+|.+... .++..|| ++..+
T Consensus 176 ~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~-~vK~~A~~~~v~~~ 250 (266)
T PRK10976 176 FSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQ-RLKDLLPELEVIGS 250 (266)
T ss_pred EeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcH-HHHHhCCCCeeccc
Confidence 0123455665 69999998887655 679999999999999999999999966544 3788887 56543
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=6.9e-08 Score=106.39 Aligned_cols=129 Identities=22% Similarity=0.223 Sum_probs=91.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.||+.+.|+.|+++|+++.++||.....+..+..++|+...-.+.+.+...
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg--------------------------- 233 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG--------------------------- 233 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC---------------------------
Confidence 58999999999999999999999999988888888888873211111111000
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEE-eCCchhHHHHHHHHHccCC---CeEEE
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICC-RSSPKQKALVTRLVKTKTS---STTLA 644 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~-r~sP~qK~~iV~~lk~~~~---~~v~a 644 (978)
.++|. +.. -+..+.|...++.+.+..| +.|+|
T Consensus 234 --------------------~ltg~------------------------v~g~iv~~k~K~~~L~~la~~lgi~~~qtIa 269 (322)
T PRK11133 234 --------------------KLTGN------------------------VLGDIVDAQYKADTLTRLAQEYEIPLAQTVA 269 (322)
T ss_pred --------------------EEEeE------------------------ecCccCCcccHHHHHHHHHHHcCCChhhEEE
Confidence 11111 110 1234678888888776444 68999
Q ss_pred EcCCcCCHHHhhhccccccccCCccchhccccceehhchhhhHHHHH
Q 002029 645 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLL 691 (978)
Q Consensus 645 iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~~l~~lll 691 (978)
+|||.||.+|++.|++||++..++. .+..||.++. +..|..+|.
T Consensus 270 VGDg~NDl~m~~~AGlgiA~nAkp~--Vk~~Ad~~i~-~~~l~~~l~ 313 (322)
T PRK11133 270 IGDGANDLPMIKAAGLGIAYHAKPK--VNEQAQVTIR-HADLMGVLC 313 (322)
T ss_pred EECCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEec-CcCHHHHHH
Confidence 9999999999999999999955544 6789999996 444444443
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=9.3e-08 Score=101.52 Aligned_cols=182 Identities=16% Similarity=0.158 Sum_probs=99.4
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc----ccCceEEEEecCCCcccccchhhhHHHHHHHHHHHH
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 565 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~----~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (978)
+.+.+.++|++|+++|++++++||+....+..+++.+++- ..++..+..............+.....+...
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~----- 95 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSEL----- 95 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHH-----
Confidence 7789999999999999999999999999999999988863 3344333322111111111111111111110
Q ss_pred HHHHHhhhhhhccccCCCCCeEEEE-cCchhhhhchhhHHHHHHHHHh---ccCeeEEEeCCchh--HHHHHHHHHccCC
Q 002029 566 LHQLIRGKELLDSSNESLGPLALII-DGKSLTYALEDDVKDLFLELAI---GCASVICCRSSPKQ--KALVTRLVKTKTS 639 (978)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~lvi-~G~~l~~~~~~~~~~~f~~l~~---~~~~vi~~r~sP~q--K~~iV~~lk~~~~ 639 (978)
..........+...........+.+ ..... ++..+.+..... ...+..+..+.|.. |+..++.+.++.|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~ 170 (230)
T PRK01158 96 KKRFPEASTSLTKLDPDYRKTEVALRRTVPV-----EEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMG 170 (230)
T ss_pred HHhccccceeeecCCcccccceeeecccccH-----HHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhC
Confidence 0000000000000000000001111 11111 122222221110 01111234555554 9998888876544
Q ss_pred ---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 640 ---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 640 ---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
..++++|||.||.+|++.|++|++|.+... .++..||++..+
T Consensus 171 i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~-~vk~~a~~v~~~ 215 (230)
T PRK01158 171 IDPEEVAAIGDSENDLEMFEVAGFGVAVANADE-ELKEAADYVTEK 215 (230)
T ss_pred CCHHHEEEECCchhhHHHHHhcCceEEecCccH-HHHHhcceEecC
Confidence 579999999999999999999999965543 478899998865
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.5e-08 Score=107.23 Aligned_cols=194 Identities=15% Similarity=0.153 Sum_probs=105.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc----ccCceEEEEecCC--CcccccchhhhHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVIISSET--PESKTLEKSEDKSAAAAAL 561 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~----~~~~~~i~i~~~~--~~~~~~~~~~~~~~~~~~~ 561 (978)
.++.+.+.++|++|+++|+++.+.||+....+..+..++++- ..++..+ ..... .....++.+.....+....
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i-~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALI-DDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEE-EETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhccccccee-eecccccchhhheeccchhheeehhh
Confidence 346789999999999999999999999999999999988863 3344444 12221 1222333333333332222
Q ss_pred HHHHHHHHHhhhhhhcccc-------------------------CCCCCeEEEEcCc-hhhhhchhhHHHHHHHHH-hcc
Q 002029 562 KASVLHQLIRGKELLDSSN-------------------------ESLGPLALIIDGK-SLTYALEDDVKDLFLELA-IGC 614 (978)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~lvi~G~-~l~~~~~~~~~~~f~~l~-~~~ 614 (978)
...+...+........... ....-..+.+.++ .-...+.+++.+.+.... ...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 2111000000000000000 0000011111111 111111223333332110 000
Q ss_pred CeeEEEeCCc--hhHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhch
Q 002029 615 ASVICCRSSP--KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 683 (978)
Q Consensus 615 ~~vi~~r~sP--~qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f 683 (978)
...-+..++| -.|+..++.+.+..| +.++++||+.||.+|++.|+.||+|.+.... .+..||++...-
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~-~k~~a~~i~~~~ 245 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPE-LKKAADYITPSN 245 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HH-HHHHSSEEESSG
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHH-HHHhCCEEecCC
Confidence 1112233445 379999998886543 7899999999999999999999999766543 788999988763
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.3e-07 Score=98.12 Aligned_cols=178 Identities=16% Similarity=0.197 Sum_probs=97.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc----cccCceEEEEecCCCc--ccccchhhhHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVIISSETPE--SKTLEKSEDKSAAAAALK 562 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl----~~~~~~~i~i~~~~~~--~~~~~~~~~~~~~~~~~~ 562 (978)
.+.+.+.++|++|+++||++.++||+....+..+++.+|+ +..++..+........ ...++.........
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~---- 90 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVI---- 90 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHH----
Confidence 4778889999999999999999999999999999999884 2223333322211000 00111100000000
Q ss_pred HHHHHHHHhhhhhhccccC-CCCCeEEEEcCchhhhhchhhHHHHHHHHHhcc---CeeEEEeCCch--hHHHHHHHHHc
Q 002029 563 ASVLHQLIRGKELLDSSNE-SLGPLALIIDGKSLTYALEDDVKDLFLELAIGC---ASVICCRSSPK--QKALVTRLVKT 636 (978)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~-~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~---~~vi~~r~sP~--qK~~iV~~lk~ 636 (978)
.. ............ ......+....+ .+ ........+.... ....+..+.|. .|+..++.+.+
T Consensus 91 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~ 159 (225)
T TIGR01482 91 AK-----TFPFSRLKVQYPRRASLVKMRYGID-VD-----TVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKE 159 (225)
T ss_pred hc-----ccchhhhccccccccceEEEeecCC-HH-----HHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHH
Confidence 00 000000000000 001111111111 11 1111111111111 11124445553 79988888876
Q ss_pred cCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 637 KTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 637 ~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
+.| ..|++|||+.||.+|++.|++|++|.+... .++..||++..+
T Consensus 160 ~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~-~~k~~A~~vt~~ 207 (225)
T TIGR01482 160 KLGIKPGETLVCGDSENDIDLFEVPGFGVAVANAQP-ELKEWADYVTES 207 (225)
T ss_pred HhCCCHHHEEEECCCHhhHHHHHhcCceEEcCChhH-HHHHhcCeecCC
Confidence 544 679999999999999999999999966543 378899998754
|
catalyze the same reaction as SPP. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.54 E-value=7.8e-08 Score=113.36 Aligned_cols=62 Identities=27% Similarity=0.389 Sum_probs=50.8
Q ss_pred EeCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 620 CRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 620 ~r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
..+.|. .|+.-++.+.++.| ..|+|||||.||++||+.|+.||+|.+... .++.+||++..+
T Consensus 499 lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~e-eVK~~Ad~VT~s 565 (580)
T PLN02887 499 LEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAE-KTKAVADVIGVS 565 (580)
T ss_pred EEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCH-HHHHhCCEEeCC
Confidence 344554 79999998887655 679999999999999999999999965543 488999998764
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.53 E-value=3.9e-07 Score=95.62 Aligned_cols=178 Identities=16% Similarity=0.225 Sum_probs=99.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc----ccCceEEEEecCCCcccccchhhhHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVIISSETPESKTLEKSEDKSAAAAALKAS 564 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~----~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (978)
++.+++.++|++|+++|+++.++||+....+..+++.+++- ..++..+...... ................ .
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~---~~~~~~~~~~~~~~~~-~- 92 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKED---IFLANMEEEWFLDEEK-K- 92 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCc---EEEecccchhhHHHhh-h-
Confidence 38889999999999999999999999999999999988763 2334443332211 1111100000000000 0
Q ss_pred HHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhc-cCeeEEEeCCc--hhHHHHHHHHHccCC--
Q 002029 565 VLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG-CASVICCRSSP--KQKALVTRLVKTKTS-- 639 (978)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~-~~~vi~~r~sP--~qK~~iV~~lk~~~~-- 639 (978)
.... ...... ........+..+++... .+...+...... ..+..+..++| -.|+..++.+.+..+
T Consensus 93 --~~~~--~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~ 162 (215)
T TIGR01487 93 --KRFP--RDRLSN-EYPRASLVIMREGKDVD-----EVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIK 162 (215)
T ss_pred --hhhh--hhhccc-ccceeEEEEecCCccHH-----HHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCC
Confidence 0000 000000 00011112222322221 111111111000 00012234444 489999998876544
Q ss_pred -CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 640 -STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 640 -~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
..+++|||+.||.+|++.|++|++|.+.. .+++..||++..+
T Consensus 163 ~~~~i~iGDs~ND~~ml~~ag~~vam~na~-~~~k~~A~~v~~~ 205 (215)
T TIGR01487 163 PEEVAAIGDSENDIDLFRVVGFKVAVANAD-DQLKEIADYVTSN 205 (215)
T ss_pred HHHEEEECCCHHHHHHHHhCCCeEEcCCcc-HHHHHhCCEEcCC
Confidence 46999999999999999999999996554 4488899998864
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.52 E-value=6e-07 Score=97.77 Aligned_cols=188 Identities=12% Similarity=0.118 Sum_probs=100.0
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc-----cccCceEEEEecCCC-------cccccchhhhHHHH
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL-----LRQGMRQVIISSETP-------ESKTLEKSEDKSAA 557 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl-----~~~~~~~i~i~~~~~-------~~~~~~~~~~~~~~ 557 (978)
+-+.+.++|++|+++|+++++.||+....+..+++++|+ +..|+..+....... ....++.+...+.+
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 446789999999999999999999999999999999986 234444444321110 01123333333333
Q ss_pred HHHHHH-HHH---------HHHHhh--hh--hhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCe---eEEE
Q 002029 558 AAALKA-SVL---------HQLIRG--KE--LLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCAS---VICC 620 (978)
Q Consensus 558 ~~~~~~-~~~---------~~~~~~--~~--~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~---vi~~ 620 (978)
+..... ... ...... .. .............+.+.+..- .+ .++.+.+... .+.. .-+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~l~~~--~~~~~~~~~~i 179 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDE--RM-AQFTARLAEL--GLQFVQGARFW 179 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHH--HH-HHHHHHHHHC--CCEEEecCeeE
Confidence 322211 100 000000 00 000000000111122222110 00 1122222210 1111 1244
Q ss_pred eCCch--hHHHHHHHHHccCC------CeEEEEcCCcCCHHHhhhccccccccCCc--cchh---ccccceehhc
Q 002029 621 RSSPK--QKALVTRLVKTKTS------STTLAIGDGANDVGMLQEADIGVGISGVE--GMQA---VMSSDIAIAQ 682 (978)
Q Consensus 621 r~sP~--qK~~iV~~lk~~~~------~~v~aiGDG~ND~~ml~~AdvGI~i~g~e--~~~a---~~asD~vi~~ 682 (978)
.+.|. .|+..++.+.++.| ..|+++|||.||.+||+.|++||+|.+.. ..++ +..+|++...
T Consensus 180 Ei~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~ 254 (271)
T PRK03669 180 HVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQR 254 (271)
T ss_pred EEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccC
Confidence 56664 79998888876533 57999999999999999999999996432 1112 2367776654
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=4.5e-07 Score=98.93 Aligned_cols=188 Identities=14% Similarity=0.126 Sum_probs=102.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc----cccCceEEEEe--cCCCcccccchhhhHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVIIS--SETPESKTLEKSEDKSAAAAALK 562 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl----~~~~~~~i~i~--~~~~~~~~~~~~~~~~~~~~~~~ 562 (978)
++.+.+.++|++++++|+++.+.||+....+..+.+++++ +..|+..+.-. ++......++.+...+.++....
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~~l~~~~l~~~~~~~i~~~~~~ 99 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKKVLEADPLPVQQALQVIEMLDE 99 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCCEEEEecCCCHHHHHHHHHHHHh
Confidence 4788899999999999999999999999999999999875 33444444321 11122233444433333332221
Q ss_pred HHHHH---------------HHHhh---hhhhcccc---------------CCCCCeEEEEcCchhhhhchhhHHHHHHH
Q 002029 563 ASVLH---------------QLIRG---KELLDSSN---------------ESLGPLALIIDGKSLTYALEDDVKDLFLE 609 (978)
Q Consensus 563 ~~~~~---------------~~~~~---~~~~~~~~---------------~~~~~~~lvi~G~~l~~~~~~~~~~~f~~ 609 (978)
..+.. ..... ........ .......+.......... ..+.+.+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~ 177 (272)
T PRK10530 100 HQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIWKFALTHEDLPQL--QHFAKHVEH 177 (272)
T ss_pred CCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCcEEEEEecCCHHHH--HHHHHHHhh
Confidence 11100 00000 00000000 000011122221111100 011111111
Q ss_pred HHhccCee------EEEeCCc--hhHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccce
Q 002029 610 LAIGCASV------ICCRSSP--KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI 678 (978)
Q Consensus 610 l~~~~~~v------i~~r~sP--~qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~ 678 (978)
..... -+....| ..|+..++.+.+..| +.|++|||+.||.+|++.|++||+|.+. ....+..||+
T Consensus 178 ---~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna-~~~lk~~Ad~ 253 (272)
T PRK10530 178 ---ELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNA-DDAVKARADL 253 (272)
T ss_pred ---hcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCc-hHHHHHhCCE
Confidence 11100 1223333 369988887765544 5799999999999999999999999654 3447889999
Q ss_pred ehhc
Q 002029 679 AIAQ 682 (978)
Q Consensus 679 vi~~ 682 (978)
+..+
T Consensus 254 v~~~ 257 (272)
T PRK10530 254 VIGD 257 (272)
T ss_pred EEec
Confidence 8865
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.4e-06 Score=93.96 Aligned_cols=188 Identities=12% Similarity=0.111 Sum_probs=99.5
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc----cccCceEEEEecCCC-------cccccchhhhHHHHH
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVIISSETP-------ESKTLEKSEDKSAAA 558 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl----~~~~~~~i~i~~~~~-------~~~~~~~~~~~~~~~ 558 (978)
..+.+.++|++|+++|+++.++||+....+..+.+++|+ +..++..+....... ....++.+...+.++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 445689999999999999999999999999999999886 445555554332211 112233333333333
Q ss_pred HHHHH-HHHHHHHh-----------h--hhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhc-cCeeEEEeCC
Q 002029 559 AALKA-SVLHQLIR-----------G--KELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG-CASVICCRSS 623 (978)
Q Consensus 559 ~~~~~-~~~~~~~~-----------~--~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~-~~~vi~~r~s 623 (978)
..... ........ . ...............++. ..+.. +.+...+...... ..+..+..+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~s~~~~ei~ 171 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW-SEERR----ERFTEALVELGLEVTHGNRFYHVL 171 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec-ChHHH----HHHHHHHHHcCCEEEeCCceEEEe
Confidence 22111 00000000 0 000000000011111122 21111 1122222211000 0001233344
Q ss_pred ch--hHHHHHHHHHccC-----CCeEEEEcCCcCCHHHhhhccccccccCCcc--chhccc--c-ceehhc
Q 002029 624 PK--QKALVTRLVKTKT-----SSTTLAIGDGANDVGMLQEADIGVGISGVEG--MQAVMS--S-DIAIAQ 682 (978)
Q Consensus 624 P~--qK~~iV~~lk~~~-----~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~--~~a~~a--s-D~vi~~ 682 (978)
|. .|+..++.+.+.. ...|+++||+.||.+|++.|++||+|.+... ...+.. | +++...
T Consensus 172 ~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~ 242 (256)
T TIGR01486 172 GAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPA 242 (256)
T ss_pred cCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCC
Confidence 43 6888888776653 4679999999999999999999999977642 235554 3 465543
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.39 E-value=4.5e-07 Score=97.96 Aligned_cols=190 Identities=19% Similarity=0.161 Sum_probs=103.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc----cccCceEEEEec-CCCcccccchhhhHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVIISS-ETPESKTLEKSEDKSAAAAALKA 563 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl----~~~~~~~i~i~~-~~~~~~~~~~~~~~~~~~~~~~~ 563 (978)
++.+++.++|++|++.|+++.++||+....+..+..++++ +..++..+.... .......++.+...+.+......
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~~ 95 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKKH 95 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHHc
Confidence 4778999999999999999999999999999999988875 334444443321 11222333433333333322211
Q ss_pred HHHHHHHhhhh-hhccc------------cC------------CCCCeEEEEcCchhhhhchhhHHHHHHH--HHhccC-
Q 002029 564 SVLHQLIRGKE-LLDSS------------NE------------SLGPLALIIDGKSLTYALEDDVKDLFLE--LAIGCA- 615 (978)
Q Consensus 564 ~~~~~~~~~~~-~~~~~------------~~------------~~~~~~lvi~G~~l~~~~~~~~~~~f~~--l~~~~~- 615 (978)
.....+..... ..... .. ......+.+.++.-. .+++...+.. ......
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 172 (256)
T TIGR00099 96 GLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPED---LDLLIEALNKLELEENVSV 172 (256)
T ss_pred CcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHH---HHHHHHHhhhhhhcCCEEE
Confidence 11000000000 00000 00 000001111111000 0111122211 000011
Q ss_pred ---eeEEEeCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 616 ---SVICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 616 ---~vi~~r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
..-+..+.|. .|+..++.+.+..+ ..++++||+.||++|++.|++|++|.+.. ..++..||++..+
T Consensus 173 ~~s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~-~~~k~~a~~~~~~ 246 (256)
T TIGR00099 173 VSSGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNAD-EELKALADYVTDS 246 (256)
T ss_pred EEecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCch-HHHHHhCCEEecC
Confidence 0113345554 69999998887544 67999999999999999999999996543 3478889998765
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.38 E-value=9.3e-07 Score=93.08 Aligned_cols=123 Identities=22% Similarity=0.281 Sum_probs=86.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.+++++.++.|++.|+++.++||.....+..+.+.+|+..--...+..+..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--------------------------- 137 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDG--------------------------- 137 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECC---------------------------
Confidence 68999999999999999999999999999999999998884311111111100
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEe-CCchhHHHHHHHHHccCC---CeEEE
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTKTS---STTLA 644 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r-~sP~qK~~iV~~lk~~~~---~~v~a 644 (978)
.++|. +.++ ..+..|..+++.+.+..+ ..+++
T Consensus 138 --------------------~~~~~------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~ 173 (219)
T TIGR00338 138 --------------------KLTGL------------------------VEGPIVDASYKGKTLLILLRKEGISPENTVA 173 (219)
T ss_pred --------------------EEEEE------------------------ecCcccCCcccHHHHHHHHHHcCCCHHHEEE
Confidence 00000 1111 112346666665544333 56899
Q ss_pred EcCCcCCHHHhhhccccccccCCccchhccccceehhchh
Q 002029 645 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 684 (978)
Q Consensus 645 iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~ 684 (978)
|||+.+|++|.+.|++++++.+.+. +..+||+++.+.+
T Consensus 174 iGDs~~Di~aa~~ag~~i~~~~~~~--~~~~a~~~i~~~~ 211 (219)
T TIGR00338 174 VGDGANDLSMIKAAGLGIAFNAKPK--LQQKADICINKKD 211 (219)
T ss_pred EECCHHHHHHHHhCCCeEEeCCCHH--HHHhchhccCCCC
Confidence 9999999999999999999977654 6678999988754
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.6e-06 Score=84.23 Aligned_cols=129 Identities=17% Similarity=0.278 Sum_probs=86.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCce--EEEEecCCCcccccchhhhHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMR--QVIISSETPESKTLEKSEDKSAAAAALKASVL 566 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (978)
.+-+|+++....|++.|.++.++||--..-+..+|.++||...+.. .+.++.....
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~---------------------- 145 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKY---------------------- 145 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcc----------------------
Confidence 3679999999999999999999999999999999999999653321 1111111000
Q ss_pred HHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHcc-CCCeEEEE
Q 002029 567 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK-TSSTTLAI 645 (978)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~-~~~~v~ai 645 (978)
..++... .-+...-|+.+++.+++. ..+.++||
T Consensus 146 -----------------------~gfd~~~-----------------------ptsdsggKa~~i~~lrk~~~~~~~~mv 179 (227)
T KOG1615|consen 146 -----------------------LGFDTNE-----------------------PTSDSGGKAEVIALLRKNYNYKTIVMV 179 (227)
T ss_pred -----------------------cccccCC-----------------------ccccCCccHHHHHHHHhCCChheeEEe
Confidence 0000000 001234799999999874 34789999
Q ss_pred cCCcCCHHHhhhccccccccCCccch-hccccceehhchhh
Q 002029 646 GDGANDVGMLQEADIGVGISGVEGMQ-AVMSSDIAIAQFRF 685 (978)
Q Consensus 646 GDG~ND~~ml~~AdvGI~i~g~e~~~-a~~asD~vi~~f~~ 685 (978)
|||+||.+|+..||.=||..|.-..+ .+..++..+.+|..
T Consensus 180 GDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~~~f~~ 220 (227)
T KOG1615|consen 180 GDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYVTDFYV 220 (227)
T ss_pred cCCccccccCCchhhhhccCCceEcHhhHhccHHHHHHHHH
Confidence 99999999999988777665543221 33455555555443
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.3e-05 Score=88.54 Aligned_cols=280 Identities=13% Similarity=0.169 Sum_probs=168.6
Q ss_pred HHhhcccEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCC-Ccccccch
Q 002029 472 EKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET-PESKTLEK 550 (978)
Q Consensus 472 ~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~-~~~~~~~~ 550 (978)
++.-.+-.|.|++...-+.+.+....|+.|-++-|+.+..+-.+.....-.|.++||-.....-+.+..+. ....+...
T Consensus 809 ~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~p 888 (1354)
T KOG4383|consen 809 DQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGP 888 (1354)
T ss_pred HHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCC
Confidence 33446778999999999999999999999999999999999999999999999999976654444444332 11111110
Q ss_pred --hh-------hHHHHHHHHHHH---HHHHHHhhhhhhccccC---------CCCCeEEEEcCchhhhhchhhHHHHHHH
Q 002029 551 --SE-------DKSAAAAALKAS---VLHQLIRGKELLDSSNE---------SLGPLALIIDGKSLTYALEDDVKDLFLE 609 (978)
Q Consensus 551 --~~-------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---------~~~~~~lvi~G~~l~~~~~~~~~~~f~~ 609 (978)
+. ..+.+.+...++ ......++.....+-.. +..+.+-.-.|- ...+.|+.+
T Consensus 889 a~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGi-------hnVRPHL~~ 961 (1354)
T KOG4383|consen 889 AHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGI-------HNVRPHLDE 961 (1354)
T ss_pred CChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcch-------hhcCccccc
Confidence 00 001111111000 00011111111000000 000000001110 011111111
Q ss_pred HH-hccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCC--HHHhhhccccccccCCccc----------------
Q 002029 610 LA-IGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGAND--VGMLQEADIGVGISGVEGM---------------- 670 (978)
Q Consensus 610 l~-~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND--~~ml~~AdvGI~i~g~e~~---------------- 670 (978)
+- .-.-+-.|.+++|+.-.++++.+|+ .|++|+.+|..+|- .-.+-+|||+|++..-+..
T Consensus 962 iDNVPLLV~LFTDcnpeamcEMIeIMQE-~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assisma 1040 (1354)
T KOG4383|consen 962 IDNVPLLVGLFTDCNPEAMCEMIEIMQE-NGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMA 1040 (1354)
T ss_pred ccCcceeeeeccCCCHHHHHHHHHHHHH-cCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhh
Confidence 10 0001237899999999999999999 89999999999984 4456789999987542211
Q ss_pred hh--------------ccccceehhchhh--hHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccch
Q 002029 671 QA--------------VMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVY 734 (978)
Q Consensus 671 ~a--------------~~asD~vi~~f~~--l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~ 734 (978)
|| ..++|+-+.+-+. +.+| ++.+|.....+++.++|.++..+.++.++|+-.++. -.++|
T Consensus 1041 qandglsplQiSgqLnaL~c~~~f~~ee~ikiirL-Ie~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~---LP~i~ 1116 (1354)
T KOG4383|consen 1041 QANDGLSPLQISGQLNALACDFRFDHEELIKIIRL-IECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFF---LPIIF 1116 (1354)
T ss_pred hhcCCCCceeecccccccccccchhHHHHHHHHHH-HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---ccchh
Confidence 11 1122333222222 4455 788898888999999999999999988888776664 34457
Q ss_pred hhHHHHHHHHHHhhhhHhhhh-ccccCCChHH
Q 002029 735 NDWFLSLYNVFFTSLPVIALG-VFDQDVSARF 765 (978)
Q Consensus 735 ~~~~~~~~n~i~~~~p~~~l~-~~~~~~~~~~ 765 (978)
+-.+++|...+- +|.+.+| ++.+..+...
T Consensus 1117 s~sdii~lScfc--~PlL~i~tL~gk~~hkSi 1146 (1354)
T KOG4383|consen 1117 SHSDIILLSCFC--IPLLFIGTLFGKFEHKSI 1146 (1354)
T ss_pred ccchHHHHHHHH--HHHHHHHHHhcCCCccce
Confidence 777888877664 7888888 5555444433
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.25 E-value=3.5e-06 Score=88.72 Aligned_cols=52 Identities=8% Similarity=0.089 Sum_probs=42.9
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc----cccCceEEEE
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVII 538 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl----~~~~~~~i~i 538 (978)
.+..-+++.++|++|+++|++++++||+....+..+..++|+ +..|+..+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~ 68 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFI 68 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEe
Confidence 355666799999999999999999999999999999999985 3455555544
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.24 E-value=4.9e-06 Score=82.14 Aligned_cols=96 Identities=15% Similarity=0.159 Sum_probs=71.7
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhh
Q 002029 497 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 576 (978)
Q Consensus 497 ~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (978)
+|+.|++.|+++.++||+....+..+.+..|+-.-
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------------------------------------------- 70 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------------------------------------------- 70 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE---------------------------------------------
Confidence 99999999999999999999999999999887310
Q ss_pred ccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHcc---CCCeEEEEcCCcCCHH
Q 002029 577 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAIGDGANDVG 653 (978)
Q Consensus 577 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~~~~v~aiGDG~ND~~ 653 (978)
+.. ...|...++.+.+. ..+.++++||+.||.+
T Consensus 71 ------------------------------------------~~~--~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~ 106 (154)
T TIGR01670 71 ------------------------------------------YQG--QSNKLIAFSDILEKLALAPENVAYIGDDLIDWP 106 (154)
T ss_pred ------------------------------------------Eec--ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 000 01233333333222 3367999999999999
Q ss_pred HhhhccccccccCCccchhccccceehhc
Q 002029 654 MLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 654 ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
|++.|++++++..... ..+..+|+++..
T Consensus 107 ~~~~ag~~~~v~~~~~-~~~~~a~~i~~~ 134 (154)
T TIGR01670 107 VMEKVGLSVAVADAHP-LLIPRADYVTRI 134 (154)
T ss_pred HHHHCCCeEecCCcCH-HHHHhCCEEecC
Confidence 9999999999965543 267778988864
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=8.6e-06 Score=84.73 Aligned_cols=126 Identities=20% Similarity=0.186 Sum_probs=87.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.||++++++.|+++ +++.++||.....+..+...+|+..--...+..+.+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------------------------- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------------------
Confidence 4689999999999999 9999999999999999999988732111111111100
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCC
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 648 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG 648 (978)
.+.|. . -..|..|...++.++. .+..++|||||
T Consensus 121 --------------------~i~~~------------------------~--~~~p~~k~~~l~~~~~-~~~~~v~iGDs 153 (205)
T PRK13582 121 --------------------MITGY------------------------D--LRQPDGKRQAVKALKS-LGYRVIAAGDS 153 (205)
T ss_pred --------------------eEECc------------------------c--ccccchHHHHHHHHHH-hCCeEEEEeCC
Confidence 00010 0 0136778888888776 67889999999
Q ss_pred cCCHHHhhhccccccccCCccchhccccce-ehhchhhhHHH
Q 002029 649 ANDVGMLQEADIGVGISGVEGMQAVMSSDI-AIAQFRFLERL 689 (978)
Q Consensus 649 ~ND~~ml~~AdvGI~i~g~e~~~a~~asD~-vi~~f~~l~~l 689 (978)
.||.+|.++|++|+.....+.. ....++. ++.++..+..+
T Consensus 154 ~~D~~~~~aa~~~v~~~~~~~~-~~~~~~~~~~~~~~el~~~ 194 (205)
T PRK13582 154 YNDTTMLGEADAGILFRPPANV-IAEFPQFPAVHTYDELLAA 194 (205)
T ss_pred HHHHHHHHhCCCCEEECCCHHH-HHhCCcccccCCHHHHHHH
Confidence 9999999999999976554432 2234454 67777665544
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.2e-05 Score=87.79 Aligned_cols=50 Identities=14% Similarity=0.061 Sum_probs=41.3
Q ss_pred ccEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 477 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 477 dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
|.||+.- ...+.+++.++|+.|++.|++++++||+....+..+.+++|+.
T Consensus 12 DGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 12 DGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred cccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 4455531 3346677999999999999999999999999999999999863
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.16 E-value=7.7e-06 Score=84.73 Aligned_cols=118 Identities=19% Similarity=0.230 Sum_probs=80.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++++++.++++.|++.|+++.++||-....+..+++..|+..--...+..+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g-------------------------- 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKG-------------------------- 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCC--------------------------
Confidence 589999999999999999999999999999999999998632111111111000
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccC---CCeEEEE
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT---SSTTLAI 645 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~---~~~v~ai 645 (978)
...+ ..+....|..|..+++.+.+.. ...++++
T Consensus 134 --------------------~~~p------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~i 169 (201)
T TIGR01491 134 --------------------FIQP------------------------DGIVRVTFDNKGEAVERLKRELNPSLTETVAV 169 (201)
T ss_pred --------------------eEec------------------------ceeeEEccccHHHHHHHHHHHhCCCHHHEEEE
Confidence 0000 0122234667877777665432 3569999
Q ss_pred cCCcCCHHHhhhccccccccCCccchhccccc
Q 002029 646 GDGANDVGMLQEADIGVGISGVEGMQAVMSSD 677 (978)
Q Consensus 646 GDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD 677 (978)
||+.||.+|++.|++++++.+... ....|+|
T Consensus 170 GDs~~D~~~a~~ag~~~a~~~~~~-~~~~a~~ 200 (201)
T TIGR01491 170 GDSKNDLPMFEVADISISLGDEGH-ADYLAKD 200 (201)
T ss_pred cCCHhHHHHHHhcCCeEEECCCcc-chhhccc
Confidence 999999999999999999854332 2444554
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.14 E-value=7.5e-06 Score=84.09 Aligned_cols=39 Identities=23% Similarity=0.232 Sum_probs=35.8
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 002029 492 NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 530 (978)
Q Consensus 492 ~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~ 530 (978)
+++++.|+.++++|++++++||+....+..+++.+|+..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~ 130 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD 130 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc
Confidence 555699999999999999999999999999999999854
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.11 E-value=7.6e-06 Score=81.50 Aligned_cols=98 Identities=12% Similarity=0.143 Sum_probs=72.9
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhh
Q 002029 496 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 575 (978)
Q Consensus 496 ~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (978)
..|+.|+++|+++.++|+.....+..+...+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 58999999999999999999999999999999831
Q ss_pred hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCC--chhHHHHHHHHHccCCCeEEEEcCCcCCHH
Q 002029 576 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS--PKQKALVTRLVKTKTSSTTLAIGDGANDVG 653 (978)
Q Consensus 576 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~s--P~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ 653 (978)
.|.... |+--..+++.+.- ....+++|||+.||.+
T Consensus 76 ------------------------------------------~f~~~kpkp~~~~~~~~~l~~-~~~ev~~iGD~~nDi~ 112 (169)
T TIGR02726 76 ------------------------------------------FHEGIKKKTEPYAQMLEEMNI-SDAEVCYVGDDLVDLS 112 (169)
T ss_pred ------------------------------------------EEecCCCCHHHHHHHHHHcCc-CHHHEEEECCCHHHHH
Confidence 111111 2212222222221 3367999999999999
Q ss_pred HhhhccccccccCCccchhccccceehhc
Q 002029 654 MLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 654 ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
|++.|++++++.+... +++..|+++...
T Consensus 113 ~~~~ag~~~am~nA~~-~lk~~A~~I~~~ 140 (169)
T TIGR02726 113 MMKRVGLAVAVGDAVA-DVKEAAAYVTTA 140 (169)
T ss_pred HHHHCCCeEECcCchH-HHHHhCCEEcCC
Confidence 9999999999976653 378889998763
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.10 E-value=9e-06 Score=86.66 Aligned_cols=56 Identities=23% Similarity=0.262 Sum_probs=45.6
Q ss_pred eCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccc
Q 002029 621 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD 677 (978)
Q Consensus 621 r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD 677 (978)
.+.|. .|...++.+.++.+ ..++++||+.||.+|++.|+.||+|.+.... .+..||
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~-~k~~a~ 212 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPE-LEGLRH 212 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHH-HHHhhc
Confidence 45554 79999999877544 4689999999999999999999999665443 778888
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=9.6e-06 Score=82.54 Aligned_cols=111 Identities=18% Similarity=0.200 Sum_probs=78.4
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhh
Q 002029 496 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 575 (978)
Q Consensus 496 ~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (978)
.+|+.|+++|+++.++||.....+..+++++|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------------------- 89 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------------------- 89 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------------------
Confidence 69999999999999999999999999999988731
Q ss_pred hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccC---CCeEEEEcCCcCCH
Q 002029 576 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT---SSTTLAIGDGANDV 652 (978)
Q Consensus 576 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~---~~~v~aiGDG~ND~ 652 (978)
+|. ..+.|...++.+.+.. ...|++|||+.||.
T Consensus 90 ------------------------------------------~f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~ 125 (183)
T PRK09484 90 ------------------------------------------LYQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDW 125 (183)
T ss_pred ------------------------------------------eec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 000 1122443333332223 36799999999999
Q ss_pred HHhhhccccccccCCccchhccccceehh------chhhhHHHH-HHhhhh
Q 002029 653 GMLQEADIGVGISGVEGMQAVMSSDIAIA------QFRFLERLL-LVHGHW 696 (978)
Q Consensus 653 ~ml~~AdvGI~i~g~e~~~a~~asD~vi~------~f~~l~~ll-l~~gR~ 696 (978)
+|++.|++++++...+ ..++..+|+++. ..+.+..++ ...|+|
T Consensus 126 ~~a~~aG~~~~v~~~~-~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~ 175 (183)
T PRK09484 126 PVMEKVGLSVAVADAH-PLLLPRADYVTRIAGGRGAVREVCDLLLLAQGKL 175 (183)
T ss_pred HHHHHCCCeEecCChh-HHHHHhCCEEecCCCCCCHHHHHHHHHHHhcCCh
Confidence 9999999999875433 235677899986 245555553 344554
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.08 E-value=2.2e-05 Score=82.81 Aligned_cols=36 Identities=19% Similarity=0.219 Sum_probs=34.1
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 493 GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 493 ~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
.+.++|+.|+++||++.++||+....+..+.+.+++
T Consensus 20 ~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~ 55 (221)
T TIGR02463 20 PAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGL 55 (221)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 388999999999999999999999999999999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.05 E-value=2.2e-05 Score=84.29 Aligned_cols=176 Identities=13% Similarity=0.142 Sum_probs=93.6
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccc------CceEEEEecCCCcccccchhhhHHHHHHH
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQ------GMRQVIISSETPESKTLEKSEDKSAAAAA 560 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~------~~~~i~i~~~~~~~~~~~~~~~~~~~~~~ 560 (978)
..+..+.+.++|+++++.|++++++||+....+..+.++.++..+ ++..+..++.. .....-...+...
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~-----~~~~~~~~~~~~~ 93 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAE-----VPDQHWAEYLSEK 93 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCC-----cCCHHHHHHHhcc
Confidence 355778999999999999999999999999999999998887544 33333322100 0000001111110
Q ss_pred HHHHHHHHHHhhhhhhccc---cCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEE----eCCc--hhHHHHH
Q 002029 561 LKASVLHQLIRGKELLDSS---NESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICC----RSSP--KQKALVT 631 (978)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~----r~sP--~qK~~iV 631 (978)
...............+... ........+..+.+..... -.++.+.+......+..+... .+.| ..|+..+
T Consensus 94 ~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al 172 (249)
T TIGR01485 94 WQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEV-IKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQAL 172 (249)
T ss_pred cCHHHHHHHHhcCcccccCCccccCCeeEEEEechhhhhHH-HHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHH
Confidence 0000001111111111110 0111222222222111111 112222332221122222222 4455 3799999
Q ss_pred HHHHccCC---CeEEEEcCCcCCHHHhhh-ccccccccCCc
Q 002029 632 RLVKTKTS---STTLAIGDGANDVGMLQE-ADIGVGISGVE 668 (978)
Q Consensus 632 ~~lk~~~~---~~v~aiGDG~ND~~ml~~-AdvGI~i~g~e 668 (978)
+.+.+..| ..|+++||+.||.+|++. ++.||+|.+..
T Consensus 173 ~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~ 213 (249)
T TIGR01485 173 QYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQ 213 (249)
T ss_pred HHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCH
Confidence 98876543 689999999999999998 67999996654
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=4.4e-05 Score=89.99 Aligned_cols=49 Identities=8% Similarity=0.049 Sum_probs=40.6
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc----cccCceEEEE
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVII 538 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl----~~~~~~~i~i 538 (978)
.-+.+.++|+.|+++||++.+.||+....+..+++++++ +..|+..+..
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~ 486 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFI 486 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEE
Confidence 335679999999999999999999999999999999885 4556655554
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00096 Score=77.79 Aligned_cols=40 Identities=20% Similarity=0.156 Sum_probs=38.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
|+++++.+.+++++++|++++++|+-....+..+++..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl 111 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL 111 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999999999987
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00012 Score=79.27 Aligned_cols=183 Identities=13% Similarity=0.068 Sum_probs=97.1
Q ss_pred ccCCChHHHHHHHHH-cCCeEEEEcCCChhhHHHHHHHcC--ccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQ-AGIKLWVLTGDKMETAINIGFACS--LLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 565 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~-aGIkv~mlTGD~~~tA~~ia~~~g--l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (978)
.+-+++.++|++|++ .|++++++||+....+.......+ ++..++..+.-.........++.+.. +.+
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~---------~~i 106 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIA---------RDI 106 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHH---------HHH
Confidence 355788999999998 899999999999999988887665 34444433321111101111111111 111
Q ss_pred HHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccC------eeEEEeCCch--hHHHHHHHHHcc
Q 002029 566 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCA------SVICCRSSPK--QKALVTRLVKTK 637 (978)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~------~vi~~r~sP~--qK~~iV~~lk~~ 637 (978)
...+...........-.....+++........ ..+.+......+..... .--+..+.|. +|+..++.+.+.
T Consensus 107 ~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~-~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~ 185 (266)
T PRK10187 107 SVQLHTALAQLPGAELEAKGMAFALHYRQAPQ-HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQE 185 (266)
T ss_pred HHHHHHHhccCCCcEEEeCCcEEEEECCCCCc-cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHh
Confidence 11111111000010001122233333322210 01112222222222222 1122344443 899988877654
Q ss_pred CC---CeEEEEcCCcCCHHHhhhc----cccccccCCccchhccccceehhchhhh
Q 002029 638 TS---STTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDIAIAQFRFL 686 (978)
Q Consensus 638 ~~---~~v~aiGDG~ND~~ml~~A----dvGI~i~g~e~~~a~~asD~vi~~f~~l 686 (978)
.+ ..++++||+.||.+|++.+ +.||+|... ...|++.+.+-..+
T Consensus 186 ~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a-----~~~A~~~l~~~~~v 236 (266)
T PRK10187 186 APFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG-----ATQASWRLAGVPDV 236 (266)
T ss_pred cCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC-----CCcCeEeCCCHHHH
Confidence 43 6799999999999999999 888888543 34578888875443
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.96 E-value=6.1e-05 Score=80.12 Aligned_cols=52 Identities=8% Similarity=0.037 Sum_probs=42.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc----cccCceEEEEe
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVIIS 539 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl----~~~~~~~i~i~ 539 (978)
+..-+.+.++|++|+++||.+++.||........+.+++++ +..|+..+...
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p 72 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVP 72 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEc
Confidence 34566799999999999999999999999999999999997 44455555443
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.94 E-value=5.1e-05 Score=78.86 Aligned_cols=172 Identities=16% Similarity=0.179 Sum_probs=89.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc--CccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC--SLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 566 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~--gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (978)
++.+.+.++|++|++.|+++.++||+....+..+.+.. .++..++..+...+...... +.+.....+... +.+.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~--~~~~~~~~~~~~--~~~~ 92 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIE--PSDVFEEILGIK--EEIG 92 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEc--ccccHHHHHHhh--hhcC
Confidence 46788999999999999999999999999999998874 35666666655432211111 111111111100 0100
Q ss_pred HHHHhhhhhhcc--ccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhc-cCee------EEEeCCc--hhHHHHHHHHH
Q 002029 567 HQLIRGKELLDS--SNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG-CASV------ICCRSSP--KQKALVTRLVK 635 (978)
Q Consensus 567 ~~~~~~~~~~~~--~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~-~~~v------i~~r~sP--~qK~~iV~~lk 635 (978)
..+......... ...+.........+..........+.......... .... -+..+.| ..|...++.+.
T Consensus 93 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~ 172 (204)
T TIGR01484 93 AELKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALL 172 (204)
T ss_pred ceeeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHH
Confidence 000000000000 00111112222222100001111222222211100 0111 1224445 58999999887
Q ss_pred ccCC---CeEEEEcCCcCCHHHhhhccccccc
Q 002029 636 TKTS---STTLAIGDGANDVGMLQEADIGVGI 664 (978)
Q Consensus 636 ~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i 664 (978)
++.+ ..++++||+.||.+|++.|++||+|
T Consensus 173 ~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 173 KELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred HHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 6544 5699999999999999999999986
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.91 E-value=5.1e-05 Score=79.46 Aligned_cols=138 Identities=13% Similarity=0.152 Sum_probs=85.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
-+++||+++.++.|++.|+++.++||.....+..+....+... .+.. +.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~~-n~--------------------------- 117 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIYC-NE--------------------------- 117 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEEe-ce---------------------------
Confidence 4799999999999999999999999999998888887764321 1100 00
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeE-EEeCCchhHHHHHHHHHccCCCeEEEEc
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVI-CCRSSPKQKALVTRLVKTKTSSTTLAIG 646 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi-~~r~sP~qK~~iV~~lk~~~~~~v~aiG 646 (978)
+.++|..+..... . .... +.......|..+++.++. ....++|||
T Consensus 118 --------------------~~~~~~~~~~~~p-~------------~~~~~~~~~cg~~K~~~l~~~~~-~~~~~i~iG 163 (214)
T TIGR03333 118 --------------------ADFSNEYIHIDWP-H------------PCDGTCQNQCGCCKPSLIRKLSE-PNDYHIVIG 163 (214)
T ss_pred --------------------eEeeCCeeEEeCC-C------------CCccccccCCCCCHHHHHHHHhh-cCCcEEEEe
Confidence 0111211110000 0 0000 011114579999998886 567789999
Q ss_pred CCcCCHHHhhhccccccccCC-ccchhccccceehhchhhhHHHH
Q 002029 647 DGANDVGMLQEADIGVGISGV-EGMQAVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 647 DG~ND~~ml~~AdvGI~i~g~-e~~~a~~asD~vi~~f~~l~~ll 690 (978)
||.||..|.+.||++++-..- +-.+-...+.+.+.+|..+...|
T Consensus 164 Dg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l 208 (214)
T TIGR03333 164 DSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKEL 208 (214)
T ss_pred CCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHH
Confidence 999999999999997754211 11111223455556666666554
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=97.91 E-value=4.8e-05 Score=80.33 Aligned_cols=41 Identities=20% Similarity=0.428 Sum_probs=38.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.||++++++.|++.|+++.++||.....+..+...+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999999884
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.85 E-value=5e-05 Score=76.85 Aligned_cols=40 Identities=20% Similarity=0.165 Sum_probs=37.7
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
+++++.+.++.+++.|++++++||.....+..++...|+-
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 6899999999999999999999999999999999998874
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=4e-05 Score=82.17 Aligned_cols=49 Identities=24% Similarity=0.377 Sum_probs=38.6
Q ss_pred EeCCch--hHHHHHHHHHccCCCeEEEEcC----CcCCHHHhhhc-cccccccCCcc
Q 002029 620 CRSSPK--QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEA-DIGVGISGVEG 669 (978)
Q Consensus 620 ~r~sP~--qK~~iV~~lk~~~~~~v~aiGD----G~ND~~ml~~A-dvGI~i~g~e~ 669 (978)
..+.|. +|+.-++.+.++ .+.|+++|| |.||.+||+.| -.|+++.+.+.
T Consensus 180 leI~~~gvsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~ 235 (247)
T PTZ00174 180 FDVFPKGWDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPED 235 (247)
T ss_pred EEeeeCCCcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHH
Confidence 345553 799999999884 689999999 99999999976 56777665544
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.81 E-value=6.3e-05 Score=78.01 Aligned_cols=112 Identities=12% Similarity=0.023 Sum_probs=77.9
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHH
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 566 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (978)
..++++++.+.|+.+++.|++++++||-....+..+++.+|+..--+..+..+.+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g------------------------ 140 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG------------------------ 140 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC------------------------
Confidence 45789999999999999999999999999999999999999832100001100000
Q ss_pred HHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCC---CeEE
Q 002029 567 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTL 643 (978)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~---~~v~ 643 (978)
..+|+.. --.+.++.|...++.+.+..+ +.++
T Consensus 141 ----------------------~~~g~~~-----------------------~~~~~g~~K~~~l~~~~~~~~~~~~~~~ 175 (202)
T TIGR01490 141 ----------------------IYTGNID-----------------------GNNCKGEGKVHALAELLAEEQIDLKDSY 175 (202)
T ss_pred ----------------------EEeCCcc-----------------------CCCCCChHHHHHHHHHHHHcCCCHHHcE
Confidence 1122110 012345678777766544233 4789
Q ss_pred EEcCCcCCHHHhhhccccccccCC
Q 002029 644 AIGDGANDVGMLQEADIGVGISGV 667 (978)
Q Consensus 644 aiGDG~ND~~ml~~AdvGI~i~g~ 667 (978)
++||+.+|.+|++.|+.++.+...
T Consensus 176 ~~gDs~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 176 AYGDSISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred eeeCCcccHHHHHhCCCcEEeCCC
Confidence 999999999999999999987543
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00013 Score=83.81 Aligned_cols=174 Identities=13% Similarity=0.079 Sum_probs=90.4
Q ss_pred hHHHH-HHHHHcCCeEEEEcCCChhhHHHHHHHcCccccC------ceEEEEecCCCcccccchhhhHHHHHHHHHHHHH
Q 002029 494 VPECI-DKLAQAGIKLWVLTGDKMETAINIGFACSLLRQG------MRQVIISSETPESKTLEKSEDKSAAAAALKASVL 566 (978)
Q Consensus 494 v~~~I-~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~------~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (978)
..+++ +++++.|+..++.||+....+..+.++.++..++ +..+....... ....-...+.........
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~-----~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMV-----PDHGWVEYLNKKWDREIV 107 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCc-----cChhHHHHHhccCChhhH
Confidence 33444 8899999999999999999999999999987664 22232211110 111111111111111100
Q ss_pred HHHHhhhhhh--ccccC-CCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCe----eEEEeCCch--hHHHHHHHHHcc
Q 002029 567 HQLIRGKELL--DSSNE-SLGPLALIIDGKSLTYALEDDVKDLFLELAIGCAS----VICCRSSPK--QKALVTRLVKTK 637 (978)
Q Consensus 567 ~~~~~~~~~~--~~~~~-~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~----vi~~r~sP~--qK~~iV~~lk~~ 637 (978)
.........+ ..... ...+..+..+.+....+ .+.+.+.+......++. .-+..+.|. .|+..++.+.++
T Consensus 108 ~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~-~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~ 186 (413)
T PLN02382 108 VEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEV-IKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKK 186 (413)
T ss_pred HHHHhcCCCcccCCcccCCCeEEEEEechHHhHHH-HHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHH
Confidence 1100000001 01111 11122233332222211 12233333221111111 124456665 599999988775
Q ss_pred C---C---CeEEEEcCCcCCHHHhhhcc-ccccccCCccchhcc
Q 002029 638 T---S---STTLAIGDGANDVGMLQEAD-IGVGISGVEGMQAVM 674 (978)
Q Consensus 638 ~---~---~~v~aiGDG~ND~~ml~~Ad-vGI~i~g~e~~~a~~ 674 (978)
. | ..|+++||+.||.+||+.|+ .||+|.+.... .+.
T Consensus 187 ~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~e-lk~ 229 (413)
T PLN02382 187 LKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEE-LLQ 229 (413)
T ss_pred hhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHH-HHH
Confidence 4 3 58999999999999999999 69999665432 443
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00016 Score=73.96 Aligned_cols=42 Identities=14% Similarity=0.078 Sum_probs=38.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
-++.+++.+.++.|++.|+++.++|+.....+..+.+..|+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK 112 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh
Confidence 479999999999999999999999999999999999888874
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00013 Score=69.01 Aligned_cols=112 Identities=15% Similarity=0.214 Sum_probs=80.4
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhh
Q 002029 496 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 575 (978)
Q Consensus 496 ~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (978)
..|+.|+++||++-++||++...+..=|+++|+-.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------------------- 76 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------------------- 76 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------------------
Confidence 47999999999999999999999999999999821
Q ss_pred hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCC---CeEEEEcCCcCCH
Q 002029 576 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAIGDGANDV 652 (978)
Q Consensus 576 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~---~~v~aiGDG~ND~ 652 (978)
+..| -++|....+.+.++.+ +.|+.+||-.||.
T Consensus 77 -------------~~qG-------------------------------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dl 112 (170)
T COG1778 77 -------------LYQG-------------------------------ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDL 112 (170)
T ss_pred -------------eeec-------------------------------hHhHHHHHHHHHHHhCCCHHHhhhhcCccccH
Confidence 0111 1334444444433333 6899999999999
Q ss_pred HHhhhccccccccCCccchhccccceehhc------hhhhHHHHHHhhhhhh
Q 002029 653 GMLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLLVHGHWCY 698 (978)
Q Consensus 653 ~ml~~AdvGI~i~g~e~~~a~~asD~vi~~------f~~l~~lll~~gR~~~ 698 (978)
|+|+..+.+++....... .++.||++... .+....+ +..++..+
T Consensus 113 pvm~~vGls~a~~dAh~~-v~~~a~~Vt~~~GG~GAvREv~dl-il~aq~~~ 162 (170)
T COG1778 113 PVMEKVGLSVAVADAHPL-LKQRADYVTSKKGGEGAVREVCDL-ILQAQGKL 162 (170)
T ss_pred HHHHHcCCcccccccCHH-HHHhhHhhhhccCcchHHHHHHHH-HHHccCcH
Confidence 999999999988555433 56778888764 5556666 44444333
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00068 Score=84.26 Aligned_cols=187 Identities=15% Similarity=0.087 Sum_probs=98.2
Q ss_pred cCCChHHHHHHHHH-cCCeEEEEcCCChhhHHHHHHHcC--ccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHH
Q 002029 490 LQNGVPECIDKLAQ-AGIKLWVLTGDKMETAINIGFACS--LLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 566 (978)
Q Consensus 490 lr~~v~~~I~~L~~-aGIkv~mlTGD~~~tA~~ia~~~g--l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (978)
+-+++.++|++|.+ .|+.|+++||+............+ ++..++..+...+..-.........-.+......
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il----- 589 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPIL----- 589 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHH-----
Confidence 55788899999999 699999999999998888766444 5556655544222211100000100011111111
Q ss_pred HHHHhhhhhhccccCCCCCeEEEEcCc----hhhhhchhhHHHHHHHHHhccCeeEE-----EeCCc--hhHHHHHHHHH
Q 002029 567 HQLIRGKELLDSSNESLGPLALIIDGK----SLTYALEDDVKDLFLELAIGCASVIC-----CRSSP--KQKALVTRLVK 635 (978)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~lvi~G~----~l~~~~~~~~~~~f~~l~~~~~~vi~-----~r~sP--~qK~~iV~~lk 635 (978)
..+.. ......-......+...-. .+.....+++...+..+.......+. ..+.| -+|+..++.+.
T Consensus 590 ~~~~~---~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll 666 (726)
T PRK14501 590 EEFVD---RTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLL 666 (726)
T ss_pred HHHHh---cCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHH
Confidence 11111 0000000111122322211 11111112333333333222111121 23445 48999999887
Q ss_pred cc-CCCeEEEEcCCcCCHHHhhhc---cccccccCCccchhccccceehhchhhhHHH
Q 002029 636 TK-TSSTTLAIGDGANDVGMLQEA---DIGVGISGVEGMQAVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 636 ~~-~~~~v~aiGDG~ND~~ml~~A---dvGI~i~g~e~~~a~~asD~vi~~f~~l~~l 689 (978)
+. ....++++||+.||.+|++.+ ..||++.+ +..+|++.+.+-..+..+
T Consensus 667 ~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~-----~~s~A~~~l~~~~eV~~~ 719 (726)
T PRK14501 667 EAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP-----GESRARYRLPSQREVREL 719 (726)
T ss_pred hcCCCCEEEEECCCCChHHHHHhcccCceEEEECC-----CCCcceEeCCCHHHHHHH
Confidence 63 236899999999999999997 45666633 345789999875544333
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00023 Score=74.87 Aligned_cols=38 Identities=13% Similarity=0.216 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 526 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~ 526 (978)
+++||+.++++.|++.|+++.++||-....+..+.+..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh
Confidence 68999999999999999999999999999999888887
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00013 Score=69.67 Aligned_cols=44 Identities=27% Similarity=0.284 Sum_probs=40.2
Q ss_pred eccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 486 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 486 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
-..++.+++++.+++|++.|++++++||.....+....+.+|+.
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 34588999999999999999999999999999999999998873
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0006 Score=72.01 Aligned_cols=42 Identities=26% Similarity=0.249 Sum_probs=38.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
.++.+|+.+.++.|++.|+++.++||.....+..+.+..|+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 468899999999999999999999999999999999888873
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00068 Score=70.46 Aligned_cols=41 Identities=29% Similarity=0.340 Sum_probs=37.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+|+.++++.|+++|+++.++||.....+..+....|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 78899999999999999999999999998888888888873
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0015 Score=68.69 Aligned_cols=126 Identities=24% Similarity=0.196 Sum_probs=84.6
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHH
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 566 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (978)
+.++-++++++++.|+++|++..++|++....+..+.+..|+...-..++.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g----------------------------- 137 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG----------------------------- 137 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc-----------------------------
Confidence 567899999999999999999999999999999999999988542211111
Q ss_pred HHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEc
Q 002029 567 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 646 (978)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiG 646 (978)
+... -...-.|.....+.+.+.. ..+.++|||
T Consensus 138 -------------------------~~~~----------------------~~~KP~P~~l~~~~~~~~~-~~~~~l~VG 169 (220)
T COG0546 138 -------------------------GDDV----------------------PPPKPDPEPLLLLLEKLGL-DPEEALMVG 169 (220)
T ss_pred -------------------------CCCC----------------------CCCCcCHHHHHHHHHHhCC-ChhheEEEC
Confidence 0000 0011123333344444433 224799999
Q ss_pred CCcCCHHHhhhccc---cccccCC-ccchhccccceehhchhhhHHH
Q 002029 647 DGANDVGMLQEADI---GVGISGV-EGMQAVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 647 DG~ND~~ml~~Adv---GI~i~g~-e~~~a~~asD~vi~~f~~l~~l 689 (978)
|..+|..|=++|++ ||.-... ...-....+|+++.+...|...
T Consensus 170 Ds~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~ 216 (220)
T COG0546 170 DSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLAL 216 (220)
T ss_pred CCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHH
Confidence 99999999999994 4432211 1222445689999987776655
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0012 Score=68.98 Aligned_cols=41 Identities=20% Similarity=0.188 Sum_probs=37.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+|+.++++.|+++|+++.++|+.....+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 68999999999999999999999999999999998888874
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0031 Score=65.61 Aligned_cols=110 Identities=15% Similarity=0.101 Sum_probs=75.8
Q ss_pred ccCCChHHHHH-HHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECID-KLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 489 ~lr~~v~~~I~-~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
.+.|++.++|+ .+++.|++++++|+-....+..+|+..++.... .++...-+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le-------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIE-------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeE--------------------------
Confidence 57999999996 788899999999999999999999986664321 12211100
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcC
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 647 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGD 647 (978)
+.+|.. +..-.|..+.|..-++..-......+.+-||
T Consensus 147 ---------------------~~~gg~----------------------~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsD 183 (210)
T TIGR01545 147 ---------------------RGNGGW----------------------VLPLRCLGHEKVAQLEQKIGSPLKLYSGYSD 183 (210)
T ss_pred ---------------------EeCCce----------------------EcCccCCChHHHHHHHHHhCCChhheEEecC
Confidence 001100 0122355678877665432213356789999
Q ss_pred CcCCHHHhhhccccccccCCc
Q 002029 648 GANDVGMLQEADIGVGISGVE 668 (978)
Q Consensus 648 G~ND~~ml~~AdvGI~i~g~e 668 (978)
+.||.|||+.||.++.++..+
T Consensus 184 S~~D~pmL~~a~~~~~Vnp~~ 204 (210)
T TIGR01545 184 SKQDNPLLAFCEHRWRVSKRG 204 (210)
T ss_pred CcccHHHHHhCCCcEEECcch
Confidence 999999999999999986554
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0022 Score=69.82 Aligned_cols=41 Identities=12% Similarity=0.175 Sum_probs=36.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
.++.+++.++++.|+++|+++.++||.....+..+....|+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 47889999999999999999999999998888877777776
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0031 Score=67.35 Aligned_cols=49 Identities=18% Similarity=0.351 Sum_probs=38.9
Q ss_pred EEeCCch--hHHHHHHHHHccCCCeEEEEcC----CcCCHHHhhh-ccccccccCCcc
Q 002029 619 CCRSSPK--QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQE-ADIGVGISGVEG 669 (978)
Q Consensus 619 ~~r~sP~--qK~~iV~~lk~~~~~~v~aiGD----G~ND~~ml~~-AdvGI~i~g~e~ 669 (978)
+..+.|. +|+..++.++ ....|+|+|| |.||.+||+. -=.|+.+++-+.
T Consensus 180 ~iDi~~~gvnKg~al~~L~--~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 180 SFDVFPQGWDKTYCLQFLE--DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred EEEEeeCCCCHHHHHHHhc--CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 3344544 7999999998 5678999999 8999999997 666788876544
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0038 Score=66.08 Aligned_cols=40 Identities=23% Similarity=0.126 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++.||+.++++.|++.|+++.++|+.....+..+-...|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l 134 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGW 134 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCc
Confidence 5789999999999999999999999998888777777776
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0047 Score=66.12 Aligned_cols=45 Identities=16% Similarity=0.262 Sum_probs=41.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM 533 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~ 533 (978)
+++||+++.++.|++.|+++.++||-....+..+.++.|+...+.
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~ 165 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV 165 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc
Confidence 579999999999999999999999999999999999999865543
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0038 Score=65.32 Aligned_cols=41 Identities=22% Similarity=0.058 Sum_probs=37.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+|+.++++.|+++|+++.++||.....+..+.+..|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 47899999999999999999999999999988888888874
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.025 Score=63.48 Aligned_cols=237 Identities=11% Similarity=0.114 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHHhhcccccHHHHHHHHHH------HhhcccEEEEEEeeccc----cCCChHHHHHHHHHcCCeEEEE
Q 002029 442 EKEYKQFNEEFTEAKNSVSADREELAEEIAE------KIEKNLILLGATAVEDK----LQNGVPECIDKLAQAGIKLWVL 511 (978)
Q Consensus 442 ~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~------~ie~dl~llG~i~ieD~----lr~~v~~~I~~L~~aGIkv~ml 511 (978)
+++|..|..++-.|-.++ ++. ..... .+--|.||.-++ .|| +-+++.++++.|.+. .+|.++
T Consensus 91 ~~~~~~~~~~~p~al~~~----~~~-~~~~~~k~~~LfLDyDGTLaPIv--~~Pd~A~~s~~~~~aL~~La~~-~~VAIV 162 (384)
T PLN02580 91 DFAYRTWMLKYPSALTSF----EQI-ANFAKGKKIALFLDYDGTLSPIV--DDPDRALMSDAMRSAVKNVAKY-FPTAII 162 (384)
T ss_pred hHHHHHHHHhCcHHHHHH----HHH-HHHhhcCCeEEEEecCCccCCCC--CCcccccCCHHHHHHHHHHhhC-CCEEEE
Confidence 567889999988877554 111 11111 112344444333 222 345788899999877 489999
Q ss_pred cCCChhhHHHHHHHcCc--cccCceEEEE-ecCCC----ccc-c-cchhhhH-------HHHHHHHHHHHHHHHHhhhhh
Q 002029 512 TGDKMETAINIGFACSL--LRQGMRQVII-SSETP----ESK-T-LEKSEDK-------SAAAAALKASVLHQLIRGKEL 575 (978)
Q Consensus 512 TGD~~~tA~~ia~~~gl--~~~~~~~i~i-~~~~~----~~~-~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 575 (978)
||+..........-.++ ....+-.+.- .+... ... . .+.+... ...... .+.+..++......
T Consensus 163 SGR~~~~L~~~l~~~~l~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~-i~~v~~~l~e~~~~ 241 (384)
T PLN02580 163 SGRSRDKVYELVGLTELYYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPM-IDEVFRSLVESTKD 241 (384)
T ss_pred eCCCHHHHHHHhCCCCccEEEeCCceeecCCCCcccccccccccccccccccccccccchhhhhh-HHHHHHHHHHHhcc
Confidence 99999998876654333 1111111110 00000 000 0 0000000 000000 01222222222222
Q ss_pred hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccC-e-----eEEEeCCc---hhHHHHHHHHHccCC---C---
Q 002029 576 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCA-S-----VICCRSSP---KQKALVTRLVKTKTS---S--- 640 (978)
Q Consensus 576 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~-~-----vi~~r~sP---~qK~~iV~~lk~~~~---~--- 640 (978)
.....-+.+.+++.+.=..............+..+..... . --+.++.| -+|+..|+.+.+..+ .
T Consensus 242 ~pGs~VE~K~~svavHYR~a~~~~~~~~~~~l~~~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~ 321 (384)
T PLN02580 242 IKGAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDVLKKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDV 321 (384)
T ss_pred CCCCEEEecCcEEEEEeCCCCchHHHHHHHHHHHHHHhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhcCCCcccce
Confidence 2222223344455544332221111112222222211111 0 11334555 399999998776543 1
Q ss_pred eEEEEcCCcCCHHHhhh-----ccccccccCCccchhccccceehhchhhhHHHH
Q 002029 641 TTLAIGDGANDVGMLQE-----ADIGVGISGVEGMQAVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 641 ~v~aiGDG~ND~~ml~~-----AdvGI~i~g~e~~~a~~asD~vi~~f~~l~~ll 690 (978)
.++++||+.||..|++. +++||.|++... ...|++.+.+-..+..+|
T Consensus 322 ~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~---~t~A~y~L~dp~eV~~~L 373 (384)
T PLN02580 322 LPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK---ESNAFYSLRDPSEVMEFL 373 (384)
T ss_pred eEEEECCCchHHHHHHhhhccCCceEEEEecCCC---CccceEEcCCHHHHHHHH
Confidence 25899999999999996 577887754222 236789888866555553
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0061 Score=66.15 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=38.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.||+.++++.|++.|+++.++|+.....+..+-+..|+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999999888873
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0056 Score=65.98 Aligned_cols=42 Identities=17% Similarity=0.097 Sum_probs=38.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 530 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~ 530 (978)
++.+|+.++++.|++.|+++.++|+.....+..+-..+|+..
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 150 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG 150 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh
Confidence 578999999999999999999999999999998888888743
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0057 Score=65.43 Aligned_cols=162 Identities=15% Similarity=0.201 Sum_probs=81.0
Q ss_pred HHHcCCeEEEEcCCChhhHHHHHHHcCccccC------ceEEEEecCCCcccccchh-hhHHHHHHHHHHHHHHHHHhhh
Q 002029 501 LAQAGIKLWVLTGDKMETAINIGFACSLLRQG------MRQVIISSETPESKTLEKS-EDKSAAAAALKASVLHQLIRGK 573 (978)
Q Consensus 501 L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~------~~~i~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 573 (978)
..+.++...++||++.+.+..+.++.++..++ +..+.. +. ....+ .=.+.+..........+.-...
T Consensus 31 ~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~-~~-----~~~~d~~w~~~i~~~w~~~~v~~~l~~~ 104 (247)
T PF05116_consen 31 QARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYY-GE-----NWQPDEEWQAHIDERWDRERVEEILAEL 104 (247)
T ss_dssp HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEE-SS-----TTEE-HHHHHHHHTT--HHHHHHHHHCH
T ss_pred hhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEE-cC-----CCcChHHHHHHHHhcCChHHHHHHHHHh
Confidence 44788999999999999999999999985543 222222 11 11111 1111111111111111111111
Q ss_pred hhhcc---ccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCee----EEEeCCc--hhHHHHHHHHHccCC---Ce
Q 002029 574 ELLDS---SNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASV----ICCRSSP--KQKALVTRLVKTKTS---ST 641 (978)
Q Consensus 574 ~~~~~---~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~v----i~~r~sP--~qK~~iV~~lk~~~~---~~ 641 (978)
..+.. ........+..++.......+ +++...+..-...++.+ -+..+-| ..|...|+.++++.+ ..
T Consensus 105 ~~l~~q~~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~ 183 (247)
T PF05116_consen 105 PGLRPQPESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQ 183 (247)
T ss_dssp CCEEEGGCCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGG
T ss_pred hCcccCCccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHH
Confidence 11111 111223444455554433212 23333333222222211 1223444 379999999998643 57
Q ss_pred EEEEcCCcCCHHHhhhccccccccCCcc
Q 002029 642 TLAIGDGANDVGMLQEADIGVGISGVEG 669 (978)
Q Consensus 642 v~aiGDG~ND~~ml~~AdvGI~i~g~e~ 669 (978)
|+++||+.||.+||..++-||.+.+.+.
T Consensus 184 vl~aGDSgND~~mL~~~~~~vvV~Na~~ 211 (247)
T PF05116_consen 184 VLVAGDSGNDLEMLEGGDHGVVVGNAQP 211 (247)
T ss_dssp EEEEESSGGGHHHHCCSSEEEE-TTS-H
T ss_pred EEEEeCCCCcHHHHcCcCCEEEEcCCCH
Confidence 8899999999999999999998866544
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0068 Score=63.29 Aligned_cols=111 Identities=14% Similarity=0.083 Sum_probs=76.6
Q ss_pred ccCCChHHHH-HHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECI-DKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 489 ~lr~~v~~~I-~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
.+.|++.++| +.+++.|++++++|+-....+..++...|+.. ...++...-+
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~-------------------------- 147 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQ-------------------------- 147 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEE--------------------------
Confidence 5589999999 57888999999999999999999999988632 1122211100
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcC
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 647 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGD 647 (978)
...+|. +....|..+.|..-++..-........+-||
T Consensus 148 --------------------~~~tg~-----------------------~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~D 184 (211)
T PRK11590 148 --------------------RRYGGW-----------------------VLTLRCLGHEKVAQLERKIGTPLRLYSGYSD 184 (211)
T ss_pred --------------------EEEccE-----------------------ECCccCCChHHHHHHHHHhCCCcceEEEecC
Confidence 011111 1122355678877666432213456789999
Q ss_pred CcCCHHHhhhccccccccCCcc
Q 002029 648 GANDVGMLQEADIGVGISGVEG 669 (978)
Q Consensus 648 G~ND~~ml~~AdvGI~i~g~e~ 669 (978)
+.||.|||+.|+.++.++....
T Consensus 185 s~~D~pmL~~a~~~~~vnp~~~ 206 (211)
T PRK11590 185 SKQDNPLLYFCQHRWRVTPRGE 206 (211)
T ss_pred CcccHHHHHhCCCCEEECccHH
Confidence 9999999999999999866543
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.02 Score=61.26 Aligned_cols=66 Identities=11% Similarity=0.097 Sum_probs=48.0
Q ss_pred eCCchhHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhc--------cccccccCCccchhccccceehhchhhhHHH
Q 002029 621 RSSPKQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEA--------DIGVGISGVEGMQAVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 621 r~sP~qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~A--------dvGI~i~g~e~~~a~~asD~vi~~f~~l~~l 689 (978)
+..+.+|+..++.+.+..+ ..++++||+.||..|++.+ ..||.+. ++. .+..|++++.+...+..+
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~--~g~-~~~~A~~~~~~~~~v~~~ 238 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG--SGS-KKTVAKFHLTGPQQVLEF 238 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe--cCC-cCCCceEeCCCHHHHHHH
Confidence 3445589988888765433 5799999999999999999 3566663 121 456789999987765554
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0063 Score=64.08 Aligned_cols=42 Identities=17% Similarity=0.173 Sum_probs=38.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
-++.||+.++++.|++.|+++.++||.....+..+.+..|+.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 132 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR 132 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch
Confidence 468899999999999999999999999999998888888864
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.078 Score=66.39 Aligned_cols=203 Identities=11% Similarity=0.093 Sum_probs=101.5
Q ss_pred cccEEEEEEeeccccCCChHHHHHHH-HHcCCeEEEEcCCChhhHHHHHHH---cCccccCceEEEEecCCCcccccchh
Q 002029 476 KNLILLGATAVEDKLQNGVPECIDKL-AQAGIKLWVLTGDKMETAINIGFA---CSLLRQGMRQVIISSETPESKTLEKS 551 (978)
Q Consensus 476 ~dl~llG~i~ieD~lr~~v~~~I~~L-~~aGIkv~mlTGD~~~tA~~ia~~---~gl~~~~~~~i~i~~~~~~~~~~~~~ 551 (978)
-|.||+-.....-.+-+++.+++++| ++.|+.++++||+...+....... ++++.+++..+...+...-.. ....
T Consensus 603 yDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~-~~~~ 681 (854)
T PLN02205 603 YDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWET-CVPV 681 (854)
T ss_pred cCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeee-cchh
Confidence 35555533222224556888999997 778999999999999999887754 456766665544332211100 0000
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhh----hhchhhHHHHHHHHHhccCeeE-----EEeC
Q 002029 552 EDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLT----YALEDDVKDLFLELAIGCASVI-----CCRS 622 (978)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~----~~~~~~~~~~f~~l~~~~~~vi-----~~r~ 622 (978)
.. ....+. ...+...+.. ....+.-.....+++..-...+ .....++..++..........+ +..+
T Consensus 682 ~~-~~w~~~-v~~i~~~y~e---rtpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV 756 (854)
T PLN02205 682 AD-CSWKQI-AEPVMQLYTE---TTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEV 756 (854)
T ss_pred hh-HHHHHH-HHHHHHHHhc---CCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEE
Confidence 00 000000 0111111110 0011111122344444332221 1111233344433322111111 1223
Q ss_pred Cch--hHHHHHHHHHcc---CC---CeEEEEcCCcCCHHHhhhcc--------------ccccccCCccchhccccceeh
Q 002029 623 SPK--QKALVTRLVKTK---TS---STTLAIGDGANDVGMLQEAD--------------IGVGISGVEGMQAVMSSDIAI 680 (978)
Q Consensus 623 sP~--qK~~iV~~lk~~---~~---~~v~aiGDG~ND~~ml~~Ad--------------vGI~i~g~e~~~a~~asD~vi 680 (978)
.|. .|+..++.+.+. .| ..++++||+.||..|++.++ ++|.+..+ ...|.+-+
T Consensus 757 ~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~-----~S~A~y~L 831 (854)
T PLN02205 757 KPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQK-----PSKAKYYL 831 (854)
T ss_pred EeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCC-----CccCeEec
Confidence 343 799999887531 23 47999999999999999886 33333221 23567777
Q ss_pred hchhhhHHH
Q 002029 681 AQFRFLERL 689 (978)
Q Consensus 681 ~~f~~l~~l 689 (978)
.+-..+..+
T Consensus 832 ~d~~eV~~l 840 (854)
T PLN02205 832 DDTAEIVRL 840 (854)
T ss_pred CCHHHHHHH
Confidence 776555555
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.012 Score=61.78 Aligned_cols=40 Identities=20% Similarity=0.201 Sum_probs=33.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++.||+.++++.|+++|+++.++|+.....+...-...|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999887766555555554
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.015 Score=58.33 Aligned_cols=159 Identities=18% Similarity=0.197 Sum_probs=90.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++-||+.++++.|++. ...+++|---..-+..+|..+|+...+.....++-++... ..++. +.+...
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~---PeeeR---------~E~L~~ 149 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAV---PEEER---------EELLSI 149 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccC---ChHHH---------HHHHHh
Confidence 5679999999998764 5666777777788889999999855543322222221111 11111 111111
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhH----HHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCC--CeE
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDV----KDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS--STT 642 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~----~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~--~~v 642 (978)
+ ...-.++|++|-.-+++-+ .....+++...++|-. ..|+++++.+-+..+ ...
T Consensus 150 ~---------------~~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VGg-----g~ka~i~e~~~ele~~d~sa 209 (315)
T COG4030 150 I---------------DVIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVGG-----GEKAKIMEGYCELEGIDFSA 209 (315)
T ss_pred c---------------CccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhccC-----cchhHHHHHHHhhcCCCcce
Confidence 1 0011455554433222210 0112223322332211 457777777665422 346
Q ss_pred EEEcCCcCCHHHhhhcc----ccccccCCccchhccccceehhc
Q 002029 643 LAIGDGANDVGMLQEAD----IGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 643 ~aiGDG~ND~~ml~~Ad----vGI~i~g~e~~~a~~asD~vi~~ 682 (978)
+.+||+..|+.||+++. +.|+..|++= |..-||+.+..
T Consensus 210 ~~VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvis 251 (315)
T COG4030 210 VVVGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVIS 251 (315)
T ss_pred eEecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEec
Confidence 88999999999999884 5567788876 78889988876
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.02 Score=61.67 Aligned_cols=41 Identities=29% Similarity=0.208 Sum_probs=37.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.||+.++++.|+++|+++.++||.....+..+-+..|+.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~ 139 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQ 139 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhc
Confidence 46799999999999999999999999999888888887764
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.023 Score=63.92 Aligned_cols=41 Identities=17% Similarity=0.159 Sum_probs=38.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+|+.++++.|+++|+++.++|+-....+..+-+..||.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~ 256 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR 256 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH
Confidence 47899999999999999999999999999999999888874
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.02 Score=60.14 Aligned_cols=42 Identities=24% Similarity=0.175 Sum_probs=38.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
.++.+|+++.++.|++.|+++.++||-....+..+.+..|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 479999999999999999999999999999999988888874
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.037 Score=60.08 Aligned_cols=40 Identities=28% Similarity=0.158 Sum_probs=35.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++-||+.++++.|++.|+++.++||.....+..+-+..|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l 140 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAA 140 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhh
Confidence 5789999999999999999999999999887777666665
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.011 Score=62.20 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=35.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC----ChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGD----KMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD----~~~tA~~ia~~~gl~ 529 (978)
.+.+++++.++.+++.|+++.++|+. ...++..+.+..|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 45556999999999999999999998 667899998888883
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.41 Score=53.45 Aligned_cols=207 Identities=10% Similarity=0.022 Sum_probs=103.1
Q ss_pred ccEEEEEEeecc--ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc--CccccCceEEEEecCCCcccc-----
Q 002029 477 NLILLGATAVED--KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC--SLLRQGMRQVIISSETPESKT----- 547 (978)
Q Consensus 477 dl~llG~i~ieD--~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~--gl~~~~~~~i~i~~~~~~~~~----- 547 (978)
|.||+-++.-.| .+-++..++|++|. .|++++++||+..........-. .++..++..+.-.........
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~~ 197 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQS 197 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhcccCceEEEcCCcEEecCCCcceeccccccc
Confidence 566665554333 36788999999999 78999999999999998873221 122222222211110000000
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccC------eeEEEe
Q 002029 548 LEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCA------SVICCR 621 (978)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~------~vi~~r 621 (978)
...+.... .. ...+.+...+...........-+.+.+++.+.-.......-.++..++..++.... .--..+
T Consensus 198 ~~~~~~~~-~~-~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlE 275 (366)
T PLN03017 198 LLYQPAND-YL-PMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFE 275 (366)
T ss_pred cccccchh-hH-HHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEE
Confidence 00000000 00 01112222222222222222223344555554433322111223333333322221 112233
Q ss_pred CCc---hhHHHHHHHHHccCC------CeEEEEcCCcCCHHHhhhcc-----ccccccCCccchhccccceehhchhhhH
Q 002029 622 SSP---KQKALVTRLVKTKTS------STTLAIGDGANDVGMLQEAD-----IGVGISGVEGMQAVMSSDIAIAQFRFLE 687 (978)
Q Consensus 622 ~sP---~qK~~iV~~lk~~~~------~~v~aiGDG~ND~~ml~~Ad-----vGI~i~g~e~~~a~~asD~vi~~f~~l~ 687 (978)
+.| -+|+..|+.+.+..+ ..++++||...|-.|++... +||.++...+ ...|++.+.+-..+.
T Consensus 276 vRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L~dp~eV~ 352 (366)
T PLN03017 276 IRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSLQDPSEVM 352 (366)
T ss_pred ecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeCCCHHHHH
Confidence 444 399999998876432 36899999999999998763 4444432121 246889888855544
Q ss_pred HH
Q 002029 688 RL 689 (978)
Q Consensus 688 ~l 689 (978)
.+
T Consensus 353 ~f 354 (366)
T PLN03017 353 DF 354 (366)
T ss_pred HH
Confidence 44
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.025 Score=58.34 Aligned_cols=43 Identities=21% Similarity=0.108 Sum_probs=38.8
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
.+++.++++++++.|++.|+++.++||-....+..+.+..|+-
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 4567788899999999999999999999999999999998874
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.16 Score=51.09 Aligned_cols=48 Identities=6% Similarity=0.155 Sum_probs=38.7
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc-----cccCceEEEEec
Q 002029 493 GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL-----LRQGMRQVIISS 540 (978)
Q Consensus 493 ~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl-----~~~~~~~i~i~~ 540 (978)
.+.+.+..|+++|+.|+..|.-...-....-+++|+ +.+++..+.+..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~ 79 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPK 79 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecc
Confidence 467899999999999999999998888888888886 455666665543
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.047 Score=54.93 Aligned_cols=41 Identities=20% Similarity=0.215 Sum_probs=31.2
Q ss_pred cccEEEEEEeecc----ccCCChHHHHHHHHHcCCeEEEEcCCCh
Q 002029 476 KNLILLGATAVED----KLQNGVPECIDKLAQAGIKLWVLTGDKM 516 (978)
Q Consensus 476 ~dl~llG~i~ieD----~lr~~v~~~I~~L~~aGIkv~mlTGD~~ 516 (978)
.|.++.|-..+.+ ++.||++++++.|++.|+++.++|+...
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 3555555544332 2689999999999999999999998763
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.051 Score=53.65 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=31.6
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHH
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAI 520 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~ 520 (978)
+|.+.+++.+++++++++|++++++||+....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999999988874
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.06 Score=63.38 Aligned_cols=41 Identities=15% Similarity=0.087 Sum_probs=38.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.||+.++++.|++.|+++.++|+-....+..+...+|+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~ 370 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD 370 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH
Confidence 68899999999999999999999999999999998888874
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.054 Score=51.75 Aligned_cols=41 Identities=20% Similarity=0.230 Sum_probs=35.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCC--------hhhHHHHHHHcCc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDK--------METAINIGFACSL 528 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~--------~~tA~~ia~~~gl 528 (978)
-++.+++.++++.|+++|+++.++|+.. .+.+..+.+..|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3678999999999999999999999988 6667777777766
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.051 Score=57.00 Aligned_cols=40 Identities=15% Similarity=0.168 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++.||+.++++.|++.|++++++|+-....+....+..|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l 133 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGV 133 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCCh
Confidence 5789999999999999999999999988878777777776
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.05 Score=59.57 Aligned_cols=38 Identities=26% Similarity=0.265 Sum_probs=32.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 526 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~ 526 (978)
++.||+.++++.|++.|+++.++|+-....+..+-...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999998877776554443
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.036 Score=58.47 Aligned_cols=41 Identities=12% Similarity=0.167 Sum_probs=35.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCC----hhhHHHHHHHcCc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDK----METAINIGFACSL 528 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~----~~tA~~ia~~~gl 528 (978)
-.+.+++.+.++.|++.|+++.++||+. ..|+.++.+..|+
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 3477889999999999999999999974 5588888887887
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.077 Score=53.83 Aligned_cols=53 Identities=15% Similarity=0.118 Sum_probs=35.6
Q ss_pred CCCeEEEEcCCcCCHHHhhhccccc-ccc-CCcc-chhcccc--ceehhchhhhHHHH
Q 002029 638 TSSTTLAIGDGANDVGMLQEADIGV-GIS-GVEG-MQAVMSS--DIAIAQFRFLERLL 690 (978)
Q Consensus 638 ~~~~v~aiGDG~ND~~ml~~AdvGI-~i~-g~e~-~~a~~as--D~vi~~f~~l~~ll 690 (978)
..+.+++|||+.+|+.+-+.|++.. ++. |... ......+ |+++.++..+..++
T Consensus 119 ~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l 176 (181)
T PRK08942 119 DLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQAL 176 (181)
T ss_pred ChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHH
Confidence 3468999999999999999999854 332 2111 1112235 88888887776653
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.071 Score=52.08 Aligned_cols=108 Identities=17% Similarity=0.197 Sum_probs=70.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccC-ceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQG-MRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~-~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
+++|+-++.++.+++.+|.++++||-.......+-...+ ..+ ...+.+-.++.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~iv--gke~i~~idi~sn~~------------------------ 126 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIV--GKERIYCIDIVSNND------------------------ 126 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhc--cccceeeeEEeecCc------------------------
Confidence 589999999999999999999999988777666665433 111 01111111110
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCC--chhHHHHHHHHHccCCCeEEEE
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS--PKQKALVTRLVKTKTSSTTLAI 645 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~s--P~qK~~iV~~lk~~~~~~v~ai 645 (978)
.+-++|.- .++.-.-+ -.+|..+|+.+++ +.+.+.++
T Consensus 127 -------------------~ih~dg~h---------------------~i~~~~ds~fG~dK~~vI~~l~e-~~e~~fy~ 165 (220)
T COG4359 127 -------------------YIHIDGQH---------------------SIKYTDDSQFGHDKSSVIHELSE-PNESIFYC 165 (220)
T ss_pred -------------------eEcCCCce---------------------eeecCCccccCCCcchhHHHhhc-CCceEEEe
Confidence 11111110 01111112 3579999999998 78889999
Q ss_pred cCCcCCHHHhhhcccccc
Q 002029 646 GDGANDVGMLQEADIGVG 663 (978)
Q Consensus 646 GDG~ND~~ml~~AdvGI~ 663 (978)
|||+-|++|-+.+|+=.|
T Consensus 166 GDsvsDlsaaklsDllFA 183 (220)
T COG4359 166 GDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cCCcccccHhhhhhhHhh
Confidence 999999998777777664
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.1 Score=54.94 Aligned_cols=39 Identities=18% Similarity=0.091 Sum_probs=33.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++.+|+.++++.|+ +|+++.++|+.....+...-...|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l 133 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGL 133 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCCh
Confidence 47899999999999 6899999999888877776666666
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.077 Score=54.66 Aligned_cols=40 Identities=18% Similarity=0.222 Sum_probs=36.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++.+++.++++.|++.|+++.++|+-+...+..+....|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl 131 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGL 131 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCC
Confidence 5789999999999999999999999888888888888886
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.074 Score=57.00 Aligned_cols=41 Identities=22% Similarity=0.089 Sum_probs=37.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.||+.++++.|++.|+++.++|+-....+..+-+..|+.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 148 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS 148 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999988888874
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.047 Score=60.41 Aligned_cols=44 Identities=20% Similarity=0.083 Sum_probs=40.6
Q ss_pred eccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 486 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 486 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
..+++.+++.++++.|++.|++++++||....++..+.+.+++.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 57789999999999999999999999999999999998888773
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.069 Score=61.01 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=33.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHH-HcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGF-ACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~-~~gl 528 (978)
++.+|+.++++.|++.|+++.++|+.....+..... ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 477999999999999999999999998887766554 4555
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.065 Score=53.42 Aligned_cols=43 Identities=21% Similarity=0.205 Sum_probs=39.8
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
..++.+++.+.++.|++.|++++++|+-....+....+..|+.
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 4578999999999999999999999999999999999999885
|
... |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.072 Score=54.08 Aligned_cols=39 Identities=21% Similarity=0.252 Sum_probs=30.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
.++.||+.++++.|+++|+++.++|+... +..+.+..|+
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l 124 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGL 124 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCc
Confidence 36789999999999999999999997532 3445555665
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.15 Score=51.00 Aligned_cols=50 Identities=22% Similarity=0.193 Sum_probs=41.6
Q ss_pred EEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCC-ChhhHHHHHHHcCc
Q 002029 479 ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGD-KMETAINIGFACSL 528 (978)
Q Consensus 479 ~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD-~~~tA~~ia~~~gl 528 (978)
......+-+-++.+|+.++++.|+++|+++.++|+- ....+..+-...|+
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l 85 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEI 85 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCc
Confidence 344555556678999999999999999999999975 88888888777776
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.77 Score=51.14 Aligned_cols=237 Identities=11% Similarity=0.075 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHHHhhcccccHHHHHHHHHH-----HhhcccEEEEEEeeccc--cCCChHHHHHHHHHcCCeEEEEcCCC
Q 002029 443 KEYKQFNEEFTEAKNSVSADREELAEEIAE-----KIEKNLILLGATAVEDK--LQNGVPECIDKLAQAGIKLWVLTGDK 515 (978)
Q Consensus 443 ~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~-----~ie~dl~llG~i~ieD~--lr~~v~~~I~~L~~aGIkv~mlTGD~ 515 (978)
++|..|..++..|...+ ++.+..... .+--|.||+-++.--|. +-++..++|+.|. ++..+.++||+.
T Consensus 71 ~~~~~w~~~~p~a~~~~----~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~ 145 (354)
T PLN02151 71 NKQSCWIKEHPSALNMF----EEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRC 145 (354)
T ss_pred hhHHHHHHhCChHHHHH----HHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCC
Confidence 57889999887776443 222111110 11223444432222222 4567888999998 568999999999
Q ss_pred hhhHHHHHHHcCc--cccCceEEEEecCC-Cccc---ccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEE
Q 002029 516 METAINIGFACSL--LRQGMRQVIISSET-PESK---TLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALI 589 (978)
Q Consensus 516 ~~tA~~ia~~~gl--~~~~~~~i~i~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 589 (978)
.........-.++ ....+..+...... .... ........ .... ..+.+...+...........-....+++.
T Consensus 146 ~~~l~~~~~~~~l~laGsHG~e~~~p~~g~~~~~~~~~~~~~~~~-~~~~-~i~~v~~~l~~~~~~~pG~~VE~K~~sla 223 (354)
T PLN02151 146 REKVSSFVKLTELYYAGSHGMDIKGPEQGSKYKKENQSLLCQPAT-EFLP-VINEVYKKLVEKTKSIPGAKVENNKFCAS 223 (354)
T ss_pred HHHHHHHcCCccceEEEeCCceeecCCCCccccccccccccccch-hhHH-HHHHHHHHHHHHHhcCCCCEEEecCcEEE
Confidence 9988877643332 11111111100000 0000 00000000 0000 00112222221112222222223444555
Q ss_pred EcCchhhhhchhhHHHHHHHHHhc--------cCeeEEEeCC-chhHHHHHHHHHccCC------CeEEEEcCCcCCHHH
Q 002029 590 IDGKSLTYALEDDVKDLFLELAIG--------CASVICCRSS-PKQKALVTRLVKTKTS------STTLAIGDGANDVGM 654 (978)
Q Consensus 590 i~G~~l~~~~~~~~~~~f~~l~~~--------~~~vi~~r~s-P~qK~~iV~~lk~~~~------~~v~aiGDG~ND~~m 654 (978)
+.=.....-...++..++..++.. .+.|+=-|.. .-+|+..|+.+.+..+ ..++++||-..|-.|
T Consensus 224 vHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDa 303 (354)
T PLN02151 224 VHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDA 303 (354)
T ss_pred EEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHH
Confidence 443322211111222333333222 2223333332 3489999998876432 248999999999999
Q ss_pred hhhc-----cccccccCCccchhccccceehhchhhhHHH
Q 002029 655 LQEA-----DIGVGISGVEGMQAVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 655 l~~A-----dvGI~i~g~e~~~a~~asD~vi~~f~~l~~l 689 (978)
++.. ++||.++... ....|++.+.+-..+..+
T Consensus 304 F~~L~~~~~G~gI~Vg~~~---k~T~A~y~L~dp~eV~~~ 340 (354)
T PLN02151 304 FKILRDKKQGLGILVSKYA---KETNASYSLQEPDEVMEF 340 (354)
T ss_pred HHHHhhcCCCccEEeccCC---CCCcceEeCCCHHHHHHH
Confidence 9865 4445443111 123689999886655544
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.15 Score=53.75 Aligned_cols=41 Identities=15% Similarity=0.055 Sum_probs=35.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+|+.++++.|+++|+++.++|+-..+.+...-...|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 67899999999999999999999998888887776667763
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.088 Score=53.43 Aligned_cols=39 Identities=18% Similarity=0.244 Sum_probs=33.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
-++.||+.++++.|++.|+++.++|+. ..+..+-+..|+
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l 125 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGL 125 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcCh
Confidence 468999999999999999999999987 556666666776
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.12 Score=54.33 Aligned_cols=32 Identities=22% Similarity=0.334 Sum_probs=27.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETA 519 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA 519 (978)
-++.+|+.++|+.|++.|+++.++||-.....
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 35789999999999999999999998766543
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.14 Score=51.69 Aligned_cols=40 Identities=25% Similarity=0.215 Sum_probs=33.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+++.++++.|+++|++++++|+-.... ..+..++|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 688999999999999999999999988777 4444446663
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.18 Score=52.81 Aligned_cols=40 Identities=25% Similarity=0.322 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+|+.++++.|++. +++.++|+-....+..+.++.|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 5789999999999999 999999999888888888888874
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=93.48 E-value=0.23 Score=48.68 Aligned_cols=40 Identities=20% Similarity=0.335 Sum_probs=33.9
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 526 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~ 526 (978)
+.+..+|+.++++.|++.|+++.++|+-....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 4455689999999999999999999999988887766654
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.28 Score=49.13 Aligned_cols=41 Identities=20% Similarity=0.313 Sum_probs=33.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCC-hhhHHHHHHHcCc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDK-METAINIGFACSL 528 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~-~~tA~~ia~~~gl 528 (978)
.++.++++++++.|++.|+++.++|+-. ...+..+.+.+|+
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 3578999999999999999999999987 5666666666664
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=92.73 E-value=0.46 Score=49.88 Aligned_cols=41 Identities=20% Similarity=0.169 Sum_probs=36.1
Q ss_pred ccCCChHHHHHHH--HHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKL--AQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L--~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
|+.++.+++++.+ ++.|+.+.++|.-+...-..+-+.-|+-
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~ 113 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLR 113 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCc
Confidence 6789999999999 5689999999999988888888888874
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=92.72 E-value=0.13 Score=50.38 Aligned_cols=42 Identities=21% Similarity=0.041 Sum_probs=37.0
Q ss_pred eccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 486 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 486 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
..-+++||+.+.++.|+ .++++.+.|+-....|..+-+.+++
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCc
Confidence 34468999999999999 5799999999999999998888776
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=92.63 E-value=0.38 Score=49.67 Aligned_cols=39 Identities=15% Similarity=0.116 Sum_probs=31.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++.||+.++++.|+++|+++.++|+-... +.......|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 67899999999999999999999986543 3555555565
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=92.39 E-value=0.4 Score=45.51 Aligned_cols=39 Identities=10% Similarity=0.060 Sum_probs=33.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC-ChhhHHHHHHHcC
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGD-KMETAINIGFACS 527 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD-~~~tA~~ia~~~g 527 (978)
++.+|+.++++.|+++|+++.++|+- ....+..+-+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 6776666555544
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=92.30 E-value=0.65 Score=49.88 Aligned_cols=42 Identities=10% Similarity=0.152 Sum_probs=32.4
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHH---HHHHHcCc
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAI---NIGFACSL 528 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~---~ia~~~gl 528 (978)
..++-||+.+.++.|++.|+++.++|+....... ..-+..|+
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi 160 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGF 160 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCc
Confidence 4567899999999999999999999998754433 33344555
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=92.25 E-value=0.38 Score=47.73 Aligned_cols=26 Identities=31% Similarity=0.511 Sum_probs=23.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGD 514 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD 514 (978)
++-+|+.++++.|+++|+++.++|.-
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 46799999999999999999999975
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=92.01 E-value=0.32 Score=47.40 Aligned_cols=27 Identities=26% Similarity=0.369 Sum_probs=25.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCC
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDK 515 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~ 515 (978)
++.||+.++++.|++.|+++.++|+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 478999999999999999999999875
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=91.89 E-value=0.67 Score=46.71 Aligned_cols=48 Identities=17% Similarity=0.145 Sum_probs=33.0
Q ss_pred CCeEEEEcCCcCCHHHhhhccccc--cc-cCCccch-hccccceehhchhhh
Q 002029 639 SSTTLAIGDGANDVGMLQEADIGV--GI-SGVEGMQ-AVMSSDIAIAQFRFL 686 (978)
Q Consensus 639 ~~~v~aiGDG~ND~~ml~~AdvGI--~i-~g~e~~~-a~~asD~vi~~f~~l 686 (978)
...++||||..+|+.+=++|++.. ++ .|..... ....+|+++.++..|
T Consensus 123 ~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 123 MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 367899999999999999999853 43 2322111 123489988876654
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=91.21 E-value=0.88 Score=48.27 Aligned_cols=188 Identities=13% Similarity=0.090 Sum_probs=76.1
Q ss_pred ccCCChHHHHHHHHHcC-CeEEEEcCCChhhHHHHHH--HcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAG-IKLWVLTGDKMETAINIGF--ACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 565 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aG-Ikv~mlTGD~~~tA~~ia~--~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (978)
.+-+++.+++++|.+.. ..|+++||+.......... .++++.+++..+...+....... ........ .+.+
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~~-~~~~~~~~-----~~~~ 92 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTNL-PADEDLEW-----KDEV 92 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE-T-TGGGGHHH-----HHHH
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCcccccccc-ccccchHH-----HHHH
Confidence 45578889999998874 4899999999998655532 23445454444443333211110 00111111 1111
Q ss_pred HHHHHhhhhhhccccCCCCCeEEEEcCchhhhh----chhhHHHHHHHHH--------hccCeeEEEeCCchhHHHHHHH
Q 002029 566 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYA----LEDDVKDLFLELA--------IGCASVICCRSSPKQKALVTRL 633 (978)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~----~~~~~~~~f~~l~--------~~~~~vi~~r~sP~qK~~iV~~ 633 (978)
...+...........-.....++.+.-.....- ...++...+..+. ...+.+|=.|..-..|+..|+.
T Consensus 93 ~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEvrp~~~~KG~av~~ 172 (235)
T PF02358_consen 93 REILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEVRPPGVNKGSAVRR 172 (235)
T ss_dssp HHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEEE-TT--HHHHHHH
T ss_pred HHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEEEeCCCChHHHHHH
Confidence 111111111111111112223333333222211 1123333333222 2234455556666679999997
Q ss_pred HHccCC------CeEEEEcCCcCCHHHhhhccc------cccccCCccchhccccceehhc
Q 002029 634 VKTKTS------STTLAIGDGANDVGMLQEADI------GVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 634 lk~~~~------~~v~aiGDG~ND~~ml~~Adv------GI~i~g~e~~~a~~asD~vi~~ 682 (978)
+-+..+ ..++++||...|-.|++..+= ||-+...+......+|++-+.+
T Consensus 173 ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 173 LLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp HHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred HHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 776444 379999999999999988544 4444333211123455665543
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.94 E-value=0.61 Score=52.26 Aligned_cols=26 Identities=35% Similarity=0.415 Sum_probs=24.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcC
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTG 513 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTG 513 (978)
-++.|++.++++.|+++|+++.++|+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTN 54 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTN 54 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEEC
Confidence 36889999999999999999999998
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=90.62 E-value=1.1 Score=43.68 Aligned_cols=114 Identities=19% Similarity=0.163 Sum_probs=70.8
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHH
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 566 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (978)
.|..++++.+..+.+++.|.+++.||++..-.|...-.=+.=..++.
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~--------------------------------- 71 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQG--------------------------------- 71 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCC---------------------------------
Confidence 37999999999999999999999999998765543321110000000
Q ss_pred HHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHcc----CCCeE
Q 002029 567 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK----TSSTT 642 (978)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~----~~~~v 642 (978)
..-..--+..+...+-..+.. -+..+-.-+.|...++.++.. .....
T Consensus 72 --------------~~lP~Gpv~~sP~~l~~al~r---------------Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~ 122 (157)
T PF08235_consen 72 --------------HNLPDGPVLLSPDSLFSALHR---------------EVISKDPEEFKIACLRDLRALFPPDGNPFY 122 (157)
T ss_pred --------------ccCCCCCEEECCcchhhhhhc---------------cccccChHHHHHHHHHHHHHhcCCCCCeEE
Confidence 000111112222222111110 134454456788888888764 45789
Q ss_pred EEEcCCcCCHHHhhhccccc
Q 002029 643 LAIGDGANDVGMLQEADIGV 662 (978)
Q Consensus 643 ~aiGDG~ND~~ml~~AdvGI 662 (978)
+++|...+|+.+.++++|--
T Consensus 123 agfGN~~tDv~aY~~vGip~ 142 (157)
T PF08235_consen 123 AGFGNRSTDVIAYKAVGIPK 142 (157)
T ss_pred EecCCcHHHHHHHHHcCCCh
Confidence 99999999999999887764
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=90.46 E-value=0.5 Score=49.12 Aligned_cols=29 Identities=24% Similarity=0.269 Sum_probs=25.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChh
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKME 517 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ 517 (978)
++.|++.++++.|+++|+++.++|+....
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 57899999999999999999999986543
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=89.36 E-value=1.2 Score=46.66 Aligned_cols=39 Identities=18% Similarity=0.209 Sum_probs=32.9
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 525 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~ 525 (978)
+-++.+|+.+++++|+++|+++.++|.........+-+.
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~ 131 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH 131 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh
Confidence 457999999999999999999999999887766555444
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.00 E-value=0.77 Score=48.07 Aligned_cols=39 Identities=8% Similarity=0.093 Sum_probs=31.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
-++.+|++++++.| ++++.++|+.....+...-+..|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 35678999999998 5999999999887777666666663
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=87.93 E-value=2.6 Score=42.04 Aligned_cols=27 Identities=22% Similarity=0.406 Sum_probs=23.8
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCCh
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKM 516 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~ 516 (978)
+-+|+.++++.|+++|+++.++|....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 449999999999999999999997543
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=87.68 E-value=1.2 Score=49.72 Aligned_cols=37 Identities=19% Similarity=0.191 Sum_probs=33.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 525 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~ 525 (978)
++.++++++|+.|+++|+++.++|.-....|..+-+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 4568999999999999999999999999989887766
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.62 E-value=3.3 Score=42.18 Aligned_cols=40 Identities=18% Similarity=0.159 Sum_probs=33.9
Q ss_pred ccCCChHHHHHHHHHcCC-eEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGI-KLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGI-kv~mlTGD~~~tA~~ia~~~gl 528 (978)
|+-|++.++|+.+++.|- .+.++|--+......+-+..|+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence 678999999999999996 8999998888777777777666
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=87.23 E-value=2 Score=55.69 Aligned_cols=41 Identities=20% Similarity=0.024 Sum_probs=36.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
.+.+|+.+.++.|+++|+++.++|+-....+..+-+..|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 46799999999999999999999999988888887777773
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=87.01 E-value=2.6 Score=44.89 Aligned_cols=47 Identities=9% Similarity=0.133 Sum_probs=36.6
Q ss_pred EEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHH--HHHHHcCc
Q 002029 482 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAI--NIGFACSL 528 (978)
Q Consensus 482 G~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~--~ia~~~gl 528 (978)
|++.-.+++-|+++++++.|+++|+++.++|.-....+. ...++.|+
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl 65 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGI 65 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCC
Confidence 555566788999999999999999999999995554333 44566666
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=86.25 E-value=2.9 Score=43.76 Aligned_cols=31 Identities=23% Similarity=0.273 Sum_probs=28.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhh
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMET 518 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 518 (978)
-|.-+++.++++.|++.|++|+++||+....
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 3678999999999999999999999999755
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=84.84 E-value=0.89 Score=41.14 Aligned_cols=47 Identities=17% Similarity=0.196 Sum_probs=36.2
Q ss_pred EEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHH---HHcCc
Q 002029 482 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG---FACSL 528 (978)
Q Consensus 482 G~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia---~~~gl 528 (978)
|++-..+++=||+.++|+.|+++|++++++|.....+...++ +++|+
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi 56 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGI 56 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCc
Confidence 556667889999999999999999999999999877755555 44565
|
... |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=84.80 E-value=3.4 Score=42.30 Aligned_cols=39 Identities=13% Similarity=0.058 Sum_probs=26.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++.||+.++++.|++.+ +.+++|.-+..+....-+..++
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l 112 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNL 112 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCH
Confidence 47899999999999975 5677776544443333334443
|
2 hypothetical protein; Provisional |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.27 E-value=35 Score=36.70 Aligned_cols=168 Identities=11% Similarity=0.023 Sum_probs=89.9
Q ss_pred eeccccCCChHHHHHHHHHc-CCeEEEEcCCChhhHHHHHH--HcCccccCceEE-EEecCCCcccccchhhhHHHHHHH
Q 002029 485 AVEDKLQNGVPECIDKLAQA-GIKLWVLTGDKMETAINIGF--ACSLLRQGMRQV-IISSETPESKTLEKSEDKSAAAAA 560 (978)
Q Consensus 485 ~ieD~lr~~v~~~I~~L~~a-GIkv~mlTGD~~~tA~~ia~--~~gl~~~~~~~i-~i~~~~~~~~~~~~~~~~~~~~~~ 560 (978)
.....+-++..++++.|... ..-+||+||++.+-...... .+|++..++..+ ..++...... .......
T Consensus 36 p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~--~~~~~~~----- 108 (266)
T COG1877 36 PEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINL--AEEADLR----- 108 (266)
T ss_pred ccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEec--CHHHHhh-----
Confidence 44556777888999999887 56899999999998887765 334455554444 3333321111 0001111
Q ss_pred HHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchh--hHHHHH-----HHH-HhccCeeEEEeCCchhHHHHHH
Q 002029 561 LKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALED--DVKDLF-----LEL-AIGCASVICCRSSPKQKALVTR 632 (978)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~--~~~~~f-----~~l-~~~~~~vi~~r~sP~qK~~iV~ 632 (978)
..+.+...+.......+++.-.....++.+.=.....-... .+.... .++ ....+.+|-+|.+-..|+.+++
T Consensus 109 ~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~ 188 (266)
T COG1877 109 WLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIK 188 (266)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHH
Confidence 11122222222222222221112222222221111100000 000000 001 1244778899988888999999
Q ss_pred HHHccCC---CeEEEEcCCcCCHHHhhhcc
Q 002029 633 LVKTKTS---STTLAIGDGANDVGMLQEAD 659 (978)
Q Consensus 633 ~lk~~~~---~~v~aiGDG~ND~~ml~~Ad 659 (978)
.+.+... ..+++.||-.-|-.|++..+
T Consensus 189 ~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 189 YIMDELPFDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred HHHhcCCCCCCcceecCCCCccHHHHHhhc
Confidence 7766533 35899999999999999988
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.74 E-value=4.8 Score=40.40 Aligned_cols=47 Identities=19% Similarity=0.397 Sum_probs=34.9
Q ss_pred CeeEEEeCCchh--------HHHHHHHHHcc--CCCeEEEEcCCcCCHHHhhhcccc
Q 002029 615 ASVICCRSSPKQ--------KALVTRLVKTK--TSSTTLAIGDGANDVGMLQEADIG 661 (978)
Q Consensus 615 ~~vi~~r~sP~q--------K~~iV~~lk~~--~~~~v~aiGDG~ND~~ml~~AdvG 661 (978)
..+.+|.-.|++ ...+.+.++++ .-....+|||-..|..+-..|+++
T Consensus 88 d~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 88 DGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred ceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 345667666663 56777777763 127899999999999988888887
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=82.40 E-value=2.7 Score=43.21 Aligned_cols=30 Identities=23% Similarity=0.287 Sum_probs=26.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhh
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMET 518 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 518 (978)
++.+|+.++++.|+++|+++.++|.-....
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 478999999999999999999999976554
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=81.87 E-value=13 Score=43.88 Aligned_cols=77 Identities=12% Similarity=0.130 Sum_probs=51.1
Q ss_pred CchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhchhhhHHHHHHhhhhhhhHhh
Q 002029 623 SPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRIS 702 (978)
Q Consensus 623 sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~~l~~lll~~gR~~~~~i~ 702 (978)
.-++|..-++.... ......+.||+.||.+||+.|+-+..+..+.. . .+...+....+++..||..++=.-
T Consensus 173 ~Ge~Kv~rl~~~~g-~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~------~--~~~~~~~~~~~~fhdgrl~~~p~~ 243 (497)
T PLN02177 173 VGDHKRDAVLKEFG-DALPDLGLGDRETDHDFMSICKEGYMVPRTKC------E--PLPRNKLLSPVIFHEGRLVQRPTP 243 (497)
T ss_pred ccHHHHHHHHHHhC-CCCceEEEECCccHHHHHHhCCccEEeCCCCC------C--cCCcccCCCceeeeCCcccCCCCH
Confidence 34567766663321 12223799999999999999999998854221 1 144556677887888999887665
Q ss_pred HhHHHH
Q 002029 703 SMICYF 708 (978)
Q Consensus 703 ~~i~~~ 708 (978)
...+..
T Consensus 244 ~~~l~~ 249 (497)
T PLN02177 244 LVALLT 249 (497)
T ss_pred HHHHHH
Confidence 444444
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.71 E-value=4 Score=39.87 Aligned_cols=39 Identities=18% Similarity=0.238 Sum_probs=35.2
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
.-|++.+=++.++++|+++.++|.-+...+...+..+|+
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 567888889999999999999999999999889988887
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 978 | ||||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 4e-08 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 3e-06 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 2e-05 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 1e-04 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 4e-04 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 4e-04 |
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 978 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 2e-31 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 2e-29 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 7e-28 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 3e-19 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 5e-06 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 4e-16 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 9e-05 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 5e-16 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-11 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 2e-06 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 1e-05 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 5e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 5e-05 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 6e-05 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 7e-05 | |
| 3lvg_D | 190 | LCB, clathrin light chain B; SELF assembly, coated | 2e-04 | |
| 3lvg_D | 190 | LCB, clathrin light chain B; SELF assembly, coated | 3e-04 | |
| 1qzv_F | 154 | Plant photosystem I: subunit PSAF; photosynthesis, | 3e-04 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 4e-04 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 131 bits (333), Expect = 2e-31
Identities = 93/480 (19%), Positives = 159/480 (33%), Gaps = 122/480 (25%)
Query: 204 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEE 263
E LG I SDKTGTLT N M + V + ++ +
Sbjct: 341 ETLGCTSVICSDKTGTLTTNQM---------S--------VCKMFI---IDKVDGDFCSL 380
Query: 264 QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 323
E + + E E + N + D + + + A+C+ + + +E G E
Sbjct: 381 NEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGE 440
Query: 324 SPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSV 383
E A ++ + ++S E + + + LEFS RK MSV
Sbjct: 441 -ATETALTTLVEKMN--VFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSV 497
Query: 384 IVRSEEGTL-----LLLSKGA-DSVM----FERLAENGREFEEQTKEHI----NEYADA- 428
+ + + KGA + V+ + R+ KE I E+
Sbjct: 498 YCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGR 557
Query: 429 -GLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVE 487
LR L LA R+ K + ++ + + E +L +G +
Sbjct: 558 DTLRCLALATRDTPPKREEMVLDDSSR----------------FMEYETDLTFVGVVGML 601
Query: 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT 547
D + V I AGI++ ++TGD TAI I R++ I E
Sbjct: 602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC----------RRIGIFGEN----- 646
Query: 548 LEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLF 607
E+ D++ G+E D + +
Sbjct: 647 -EEVADRA--------------YTGREFDDLPLA----------------EQREACRR-- 673
Query: 608 LELAIGCASVICCRSSPKQKALVTRLVKT-----KTSSTTLAIGDGANDVGMLQEADIGV 662
A R P K +++V+ + ++ T GDG ND L++A+IG+
Sbjct: 674 -------ACCF-ARVEPSHK---SKIVEYLQSYDEITAMT---GDGVNDAPALKKAEIGI 719
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 2e-29
Identities = 91/492 (18%), Positives = 145/492 (29%), Gaps = 147/492 (29%)
Query: 204 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEE 263
E LG I SDKTGTLT N M +
Sbjct: 375 ETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIH---------------------SADTT 413
Query: 264 QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 323
++ + ++ + R+L +C+ A +
Sbjct: 414 EDQSGQT----------------FDQSSETWRALCRVLTLCNRA--AFKSGQDAVPVPKR 455
Query: 324 S----PDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRK 379
E A + + + + + + F+S+ K
Sbjct: 456 IVIGDASETALLKFSELTL----------GNAMGY--------RERFPKVCEIPFNSTNK 497
Query: 380 RMSVIVRSEE---GTLLLLSKGADSVMFER---LAENG--REFEEQTKEHI----NEYAD 427
I E+ +L+ KGA + ER + G +EQ +E
Sbjct: 498 FQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGG 557
Query: 428 AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVE 487
G R L L EK+Y EA N L G ++
Sbjct: 558 LGERVLGFCQLYLSEKDYPPGYAFDVEAMNFP---------------TSGLSFAGLVSMI 602
Query: 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT 547
D + VP+ + K AGI++ ++TGD TA I V I SE E+
Sbjct: 603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIA----------ASVGIISEGSETVE 652
Query: 548 LEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLF 607
+ + + +I G +L D L + ++
Sbjct: 653 DIAARLRVPVDQVNRKDARACVINGMQLKDMDPS----------------ELVEALRTH- 695
Query: 608 LELAIGCASVICCRSSPKQKALVTRLVK-----------TKTSSTTLAIGDGANDVGMLQ 656
++ R+SP+QK +V+ T GDG ND L+
Sbjct: 696 -------PEMVFARTSPQQK---LVIVESCQRLGAIVAVT---------GDGVNDSPALK 736
Query: 657 EADIGV--GISG 666
+ADIGV GI+G
Sbjct: 737 KADIGVAMGIAG 748
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 7e-28
Identities = 102/492 (20%), Positives = 155/492 (31%), Gaps = 147/492 (29%)
Query: 204 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEE 263
E LG TI SDKTGTLT N M T V + +
Sbjct: 370 ETLGSTSTICSDKTGTLTQNRM---------T-----VAHM---------------WFDN 400
Query: 264 QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 323
Q +A + + R+ A+C+ A +
Sbjct: 401 QIHEADTTENQSGAAF--------DKTSATWSALSRIAALCNRA--VFQAGQDNVPILKR 450
Query: 324 S----PDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRK 379
S E+A + SV + + + F+S+ K
Sbjct: 451 SVAGDASESALLKCIELCC----------GSVQGM--------RDRNPKIVEIPFNSTNK 492
Query: 380 RMSVIVRSEEGT---LLLLSKGADSVMFER---LAENG--REFEEQTKEHI----NEYAD 427
I +E+ + LL+ KGA + +R + NG +E KE E
Sbjct: 493 YQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGG 552
Query: 428 AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVE 487
G R L + L E +Y + + +L +G A+
Sbjct: 553 LGERVLGFCHFALPEDKYN---------------EGYPFDADEPNFPTTDLCFVGLMAMI 597
Query: 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT 547
D + VP+ + K AGIK+ ++TGD TA I + V I SE E+
Sbjct: 598 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA----------KGVGIISEGNETIE 647
Query: 548 LEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLF 607
+ ++ G +L D S E L+D +
Sbjct: 648 DIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTE----------------VLDDILHYH- 690
Query: 608 LELAIGCASVICCRSSPKQKALVTRLVK-----------TKTSSTTLAIGDGANDVGMLQ 656
++ R+SP+QK +V+ T GDG ND L+
Sbjct: 691 -------TEIVFARTSPQQK---LIIVEGCQRQGAIVAVT---------GDGVNDSPALK 731
Query: 657 EADIGV--GISG 666
+ADIGV GISG
Sbjct: 732 KADIGVAMGISG 743
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 3e-19
Identities = 83/578 (14%), Positives = 165/578 (28%), Gaps = 148/578 (25%)
Query: 360 TKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTK 419
+ ++ L F+ KR ++ G +SKGA + E LA+ + ++
Sbjct: 386 KEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILE-LAKASNDLSKKVL 444
Query: 420 EHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLI 479
I++YA+ GLR+L +A + + EK E
Sbjct: 445 SIIDKYAERGLRSLAVARQVVPEKT--------------------------KESPGAPWE 478
Query: 480 LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIIS 539
+G + D ++ E I + G+ + ++TGD++ G R++ +
Sbjct: 479 FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG----------RRLGMG 528
Query: 540 SETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYAL 599
+ S L+ + + ++ + L DG +A
Sbjct: 529 TNMYPSSA---------------------LLGTHKDANLASIPVEELIEKADG----FA- 562
Query: 600 EDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKT-KTSSTTLA-IGDGANDVGMLQE 657
P+ K +VK + + GDG ND L++
Sbjct: 563 ---------------------GVFPEHKY---EIVKKLQERKHIVGMTGDGVNDAPALKK 598
Query: 658 ADIGVGI-SGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIA 714
ADIG+ + + + +SDI + + + +L ++R+ + Y I
Sbjct: 599 ADIGIAVADATDAARG--ASDIVLTEPGLSVIISAVL-TSRAIFQRMKNYTIYAVSITIR 655
Query: 715 FGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQ 774
F F + L ++ + S P
Sbjct: 656 IVFGFMLIALIWEFDFSAF-----MVLIIAILNDGTIMTISKDRVKPSPT-----PD--- 702
Query: 775 EGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCV 834
SW IF + V+G T+
Sbjct: 703 --------SW------------KLKEIFATGV-------------VLGGYQAIMTVIF-- 727
Query: 835 VWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAP 894
W + S T+ + Y+ + +++ + F+E P
Sbjct: 728 FWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVE----RP 783
Query: 895 SFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWF 932
L+ ++ + A F + W
Sbjct: 784 GALLMIAFLIAQLIATLIAVYANW-EFAKIRGIGWGWA 820
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 5e-06
Identities = 45/260 (17%), Positives = 72/260 (27%), Gaps = 87/260 (33%)
Query: 54 TDCIYGA----VIFTGRDTKVFQNSTGPPSKRSK--VERRMDKIIYFLFGILVLMSFIGS 107
+ C G VI TG T + + S ++ + I F + + I
Sbjct: 200 STCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEI 259
Query: 108 IFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISL-- 165
I R +DG L+L IPI++
Sbjct: 260 IVMYPIQRRKYRDG----------------------------IDNLLVLLIGGIPIAMPT 291
Query: 166 YVSIE-------------IVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTI 212
+S+ I K + +I EE+ +D +
Sbjct: 292 VLSVTMAIGSHRLSQQGAITKRMTAI-------------------------EEMAGMDVL 326
Query: 213 LSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMA----RRKGSPLEEEVTEEQEDKA 268
SDKTGTLT N + K + G +V A ++ + D
Sbjct: 327 CSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPK 386
Query: 269 SIKG---------FNFEDER 279
+ FN D+R
Sbjct: 387 EARAGIREVHFLPFNPVDKR 406
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 4e-16
Identities = 50/316 (15%), Positives = 91/316 (28%), Gaps = 110/316 (34%)
Query: 361 KVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKE 420
V Y +L F K++ +V S +G + KGA + + E E+ +
Sbjct: 438 SVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLK-TVEEDHPIPEEVDQ 496
Query: 421 HI----NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEK 476
E+A G R+L +A + E
Sbjct: 497 AYKNKVAEFATRGFRSLGVARKR----------------------------------GEG 522
Query: 477 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQV 536
+ +LG D ++ + + + G+ + +LTGD + A RQ+
Sbjct: 523 SWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETS----------RQL 572
Query: 537 IISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLT 596
+ + ++ L D + DG
Sbjct: 573 GLGTNIYNAERLG----------------------LGGGGDMPGSEVYDFVEAADG---- 606
Query: 597 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK------TSSTTLAIGDGAN 650
+A P+ K V +++ + T GDG N
Sbjct: 607 FA----------------------EVFPQHKYNVVEILQQRGYLVAMT-------GDGVN 637
Query: 651 DVGMLQEADIGVGISG 666
D L++AD G+ + G
Sbjct: 638 DAPSLKKADTGIAVEG 653
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 9e-05
Identities = 35/321 (10%), Positives = 75/321 (23%), Gaps = 113/321 (35%)
Query: 53 NTDCIYGA----VIFTGRDT---KVFQNSTGPPSKRSKVERRMDKIIYFL-FGILVLMSF 104
++ G + TG +T + ++ I L ++ +
Sbjct: 248 SSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLI 307
Query: 105 IGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPIS 164
+ + L + +P+
Sbjct: 308 V--WVSSFYRSNPIVQI----------------------------LEFTLAITIIGVPVG 337
Query: 165 L--YVSIE-------------IVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQV 209
L V+ IV+ L +I E L V
Sbjct: 338 LPAVVTTTMAVGAAYLAKKKAIVQKLSAI-------------------------ESLAGV 372
Query: 210 DTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMAR------RKGSPLE----EE 259
+ + SDKTGTLT N + G ++ + ++ +
Sbjct: 373 EILCSDKTGTLTKNKLSLHDPYTVA---GVDPEDLMLTACLAASRKKKGIDAIDKAFLKS 429
Query: 260 VTEEQEDKASIKG--------FNFEDERIM------NGSWVNEPHADVIQK--FLRLLAI 303
+ K+ + F+ ++++ G + K L +L
Sbjct: 430 LKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERI------TCVKGAPLFVLKT 483
Query: 304 CHTALPEVDEENGKISYEAES 324
P +E + +
Sbjct: 484 VEEDHPIPEEVDQAYKNKVAE 504
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 5e-16
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 32/131 (24%)
Query: 361 KVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFER---LAENG--REFE 415
+ + ++ + F R+RMSV+V L+ KGA + + NG +
Sbjct: 51 SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLD 110
Query: 416 EQTKEHI----NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIA 471
+ I + GLR + +A + L +E +
Sbjct: 111 DIMLRKIKRVTDTLNRQGLRVVAVATKYLPARE-----------------------GDYQ 147
Query: 472 EKIEKNLILLG 482
E +LIL G
Sbjct: 148 RADESDLILEG 158
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 67.6 bits (164), Expect = 2e-11
Identities = 74/543 (13%), Positives = 162/543 (29%), Gaps = 155/543 (28%)
Query: 148 LHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELG 207
+ F T Y Y +I+ + + F+ + + D P + EE
Sbjct: 7 MDFETGEHQYQYK---------DILSVFEDAFV-DNFDCKDVQ-DMPKSILSK---EE-- 50
Query: 208 QVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSP-LEEEVTEEQED 266
+D I+ K + + S + V EV R L + EQ
Sbjct: 51 -IDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLR-----INYKFLMSPIKTEQRQ 104
Query: 267 KASI-KGFNFEDERIMNGSWVNEPHADV--IQKFLRLLAICHTALPEVDEEN-------- 315
+ + + + + +R+ N + V + +V +Q +L+L AL E+
Sbjct: 105 PSMMTRMYIEQRDRLYNDNQVFAKY-NVSRLQPYLKL----RQALLELRPAKNVLIDGVL 159
Query: 316 --GKISYEAESPDEAAFVIAARELGFEFY----ERTQTSISV--------HELDPVTGTK 361
GK + ++ F+ + + + +V +++DP ++
Sbjct: 160 GSGKTWVALDVCLSYKVQ---CKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216
Query: 362 VERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEH 421
+ S ++ + + R + + E LL+L +V Q +
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL----LNV--------------QNAKA 258
Query: 422 INEYADAGLRTLILAYRE------LDEKEYKQFNEE-----FTEAK------NSVSADRE 464
N + + + L+ R L + + T + + +
Sbjct: 259 WNAF-NLSCKILLTT-RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ 316
Query: 465 ELAEEIAEKIEKNLI-LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG 523
+L E + ++ +++G D + DK+ T I
Sbjct: 317 DLPRE-VLTTNPRRLSIIAE-----SIRDG-LATWDNWKH-------VNCDKLTTIIESS 362
Query: 524 FAC---SLLRQGMRQVII---SSETPESKTLE------KSEDKSAAAAALKASVLHQLIR 571
+ R+ ++ + S+ P L D V+++L +
Sbjct: 363 LNVLEPAEYRKMFDRLSVFPPSAHIPT-ILLSLIWFDVIKSDVM--------VVVNKLHK 413
Query: 572 GKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVT 631
L++ K T ++ ++LEL + AL
Sbjct: 414 -YSLVEK------------QPKESTISIP----SIYLEL---------KVKLENEYALHR 447
Query: 632 RLV 634
+V
Sbjct: 448 SIV 450
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 627 KALVTRLVKTKTS-STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMS-SDIAIAQFR 684
K V +L+K K + IGDGA D+ AD +G G Q V + I F
Sbjct: 158 KGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFV 217
Query: 685 FLERLL 690
L L
Sbjct: 218 ELLGEL 223
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 642 TLAIGDGANDVGMLQEADIGV 662
+A GD ND ML EA G+
Sbjct: 148 VIAAGDSYNDTTMLSEAHAGI 168
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 642 TLAIGDGANDVGMLQEADIGVG 663
T+A+GDGAND+ M ++A + +
Sbjct: 162 TVAVGDGANDISMFKKAGLKIA 183
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 642 TLAIGDGANDVGMLQEADIGVG 663
TL +GDGAND+ M + A I +
Sbjct: 161 TLVVGDGANDLSMFKHAHIKIA 182
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 5e-05
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 642 TLAIGDGANDVGMLQEADIGVG 663
T+A+GDGAND+ M+ A +GV
Sbjct: 264 TVAVGDGANDLVMMAAAGLGVA 285
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 5e-05
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 642 TLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLL 690
+A GDGAND+ ML+ A G+ ++ I + E LL
Sbjct: 265 IIACGDGANDLPMLEHAGTGIAWKAKPVVRE--KIHHQI-NYHGFELLL 310
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 6e-05
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 642 TLAIGDGANDVGMLQEADIGVG 663
T+A+GDGAND+ ML A +G+
Sbjct: 342 TVAVGDGANDIDMLAAAGLGIA 363
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* Length = 259 | Back alignment and structure |
|---|
Score = 44.6 bits (105), Expect = 7e-05
Identities = 8/51 (15%), Positives = 22/51 (43%)
Query: 627 KALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD 677
L + + + +GD ND+ + + D+ V + + + V+++
Sbjct: 182 ARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDPPEGVLATP 232
|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 2e-04
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 21/79 (26%)
Query: 399 ADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNS 458
AD + E E+ R++ E+ ++ + +ELD E +AK
Sbjct: 77 ADRLTQE--PESIRKWREEQRKRL---------------QELDAASKVMEQEWREKAKK- 118
Query: 459 VSADREELAEEIAEKIEKN 477
D EE + +E++EKN
Sbjct: 119 ---DLEEWNQRQSEQVEKN 134
|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Score = 41.7 bits (97), Expect = 3e-04
Identities = 11/75 (14%), Positives = 31/75 (41%), Gaps = 16/75 (21%)
Query: 405 ERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRE 464
+RL E + ++ E A ++L+E ++ +E+ + K + +R
Sbjct: 96 KRLQELDAA-SKVMEQEWREKAK----------KDLEEW-NQRQSEQVEKNKIN---NRI 140
Query: 465 ELAEEIAEKIEKNLI 479
+ ++ + ++I
Sbjct: 141 A-DKAFYQQPDADII 154
|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Score = 41.1 bits (95), Expect = 3e-04
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
Query: 541 ETPESKTLEKS----EDKSAAAAALKASV 565
E K L+ S D SA A A+KA++
Sbjct: 18 EKQALKKLQASLKLYADDSAPALAIKATM 46
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 10/66 (15%), Positives = 21/66 (31%), Gaps = 2/66 (3%)
Query: 597 YALEDDVKDLFLELAIGCASVICCRSSPKQ-KALVTRLVKTKTSSTTLAIGDGANDVGML 655
Y + ++ + + C + K V + + IGD DV
Sbjct: 121 YCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQ-YIIMIGDSVTDVEAA 179
Query: 656 QEADIG 661
+ +D+
Sbjct: 180 KLSDLC 185
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 978 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.85 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.87 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.84 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.76 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.51 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.04 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.82 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.78 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.76 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.76 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.73 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.72 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.7 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.68 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.66 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.65 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.6 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.6 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.51 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.5 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.49 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.48 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.48 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.4 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.39 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.39 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.38 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.36 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.35 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.33 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.33 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.31 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.28 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.25 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.25 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.24 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.2 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.19 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.18 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.17 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.14 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.12 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.11 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.08 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.08 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.08 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.04 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.04 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.03 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.01 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.0 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.94 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.94 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 97.92 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 97.87 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 97.87 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.87 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.86 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.85 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.85 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.82 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.82 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.81 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 97.76 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.75 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.74 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.73 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.69 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 97.67 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.67 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.63 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.63 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.62 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.59 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.59 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.57 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.57 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.57 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.56 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.55 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.54 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.54 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.54 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.54 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.5 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.5 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.49 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.44 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.42 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.38 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.27 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.22 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.19 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.18 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.15 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.13 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.12 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.11 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.09 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.03 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 96.96 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.95 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 96.94 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 96.92 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 96.87 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 96.85 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.68 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 96.55 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.39 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.39 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.28 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.27 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.16 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.14 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 96.14 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.09 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 96.09 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 95.86 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 95.76 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 95.61 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.42 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 95.37 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.36 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 95.36 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 95.24 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 95.13 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.03 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 94.99 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 94.71 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 94.57 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 94.52 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 94.49 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 94.32 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 94.03 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 93.94 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 93.41 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 93.34 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 92.52 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 89.4 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 89.24 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 89.12 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 86.08 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 85.9 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 84.9 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-88 Score=856.03 Aligned_cols=723 Identities=17% Similarity=0.164 Sum_probs=559.3
Q ss_pred cCceeecCceeccCCeEEEEEEEeCccch---hccccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 002029 41 PQQLLLRDSKLRNTDCIYGAVIFTGRDTK---VFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATRED 117 (978)
Q Consensus 41 ~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tk---i~~~~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 117 (978)
.+|++|+||.+.+ |.++|+|++||.+|. +..+....+.+++|+++.+++++..+..+.++++++.++++.++ +.
T Consensus 249 ~~n~~f~GT~v~~-G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~- 325 (1034)
T 3ixz_A 249 TRNIAFFSTMCLE-GTAQGLVVNTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI-GY- 325 (1034)
T ss_pred cccceecceeEEe-ecceEEEEeehhhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cc-
Confidence 4689999999997 999999999999995 45556677788999999999999999888888877766554332 11
Q ss_pred cccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccccCCCcccc
Q 002029 118 LQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARA 197 (978)
Q Consensus 118 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~ 197 (978)
.| ...+..++++++++||++||++++++.++++. +| +++++++
T Consensus 326 -------~~--------------------~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~------rm----ak~~~lv 368 (1034)
T 3ixz_A 326 -------TF--------------------LRAMVFFMAIVVAYVPEGLLATVTVCLSLTAK------RL----ASKNCVV 368 (1034)
T ss_pred -------hH--------------------HHHHHHHHHHHHheeccccHHHHHHHHHHHHH------HH----hhCCeEe
Confidence 12 33678889999999999999999999999998 66 8899999
Q ss_pred cCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcccccCCcccCc
Q 002029 198 RTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFED 277 (978)
Q Consensus 198 r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (978)
|+++++|+||++++||||||||||+|+|+|.++++++..|..+..+. ..+
T Consensus 369 r~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~-------------------------~~~----- 418 (1034)
T 3ixz_A 369 KNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTED-------------------------QSG----- 418 (1034)
T ss_pred cChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCccc-------------------------ccc-----
Confidence 99999999999999999999999999999999999887664321110 000
Q ss_pred hhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCC--cEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecC
Q 002029 278 ERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENG--KISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELD 355 (978)
Q Consensus 278 ~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~--~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~ 355 (978)
....+..+..+.+++++++||++....+++.. .-.+..++|+|.|+++++...|.....
T Consensus 419 -------~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~------------ 479 (1034)
T 3ixz_A 419 -------QTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG------------ 479 (1034)
T ss_pred -------cccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHH------------
Confidence 00012345667899999999998765432211 122345799999999999987643211
Q ss_pred CCCCccceeEeeEeEeecCCCCCceEEEEEEeC---CCeEEEEEeCCchHHHHHhccc---------chhhHHHHHHHHH
Q 002029 356 PVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE---EGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHIN 423 (978)
Q Consensus 356 ~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~ 423 (978)
.+..|+++.++||+|+||||+++++.+ ++++++|+||||+.|+++|+.. +++.++.+.+.++
T Consensus 480 ------~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~ 553 (1034)
T 3ixz_A 480 ------YRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYL 553 (1034)
T ss_pred ------HHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHH
Confidence 236789999999999999999988764 3689999999999999999752 3445778889999
Q ss_pred HHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHH
Q 002029 424 EYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 503 (978)
Q Consensus 424 ~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~ 503 (978)
+++.+|+|||++|+|.++++++.++... +. +..+.+|+||+|+|+++++||+|++++++|++|++
T Consensus 554 ~~a~~G~RvLa~A~~~l~~~~~~~~~~~----------~~-----~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~ 618 (1034)
T 3ixz_A 554 SLGGLGERVLGFCQLYLSEKDYPPGYAF----------DV-----EAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRT 618 (1034)
T ss_pred HHHhcCcHhheEeEEecChhhccccccc----------ch-----hhhhccccCcEEEEEEeccCCCchhHHHHHHHHHH
Confidence 9999999999999999998776544211 11 11245689999999999999999999999999999
Q ss_pred cCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCC
Q 002029 504 AGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESL 583 (978)
Q Consensus 504 aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (978)
+||++||+|||+..||.++|+++|+..++...+ .. ...+...... .....
T Consensus 619 aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i---------------------~~-----~~~~~~~~~~----~~~~~ 668 (1034)
T 3ixz_A 619 AGIRVIMVTGDHPITAKAIAASVGIISEGSETV---------------------ED-----IAARLRVPVD----QVNRK 668 (1034)
T ss_pred cCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHH---------------------HH-----HHHhhCccch----hcccc
Confidence 999999999999999999999999976432100 00 0000000000 00122
Q ss_pred CCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhcccccc
Q 002029 584 GPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVG 663 (978)
Q Consensus 584 ~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~ 663 (978)
.....+++|..+..+.++++.+ ....++..+|+|++|+||.++|+.+|+ .|++|+|+|||.||++||++||+||+
T Consensus 669 ~~~~~~~~g~~l~~~~~~~l~~----~~~~~~~~v~ar~~P~~K~~iv~~lq~-~g~~V~a~GDG~ND~~mLk~A~vGIA 743 (1034)
T 3ixz_A 669 DARACVINGMQLKDMDPSELVE----ALRTHPEMVFARTSPQQKLVIVESCQR-LGAIVAVTGDGVNDSPALKKADIGVA 743 (1034)
T ss_pred ccceeEEecHhhhhCCHHHHHH----HHHhCCceEEEecCHHHHHHHHHHHHH-cCCEEEEECCcHHhHHHHHHCCeeEE
Confidence 3456789999888766555443 334556779999999999999999998 89999999999999999999999999
Q ss_pred ccCCccchhccccceehhchhh--hHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHH
Q 002029 664 ISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSL 741 (978)
Q Consensus 664 i~g~e~~~a~~asD~vi~~f~~--l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 741 (978)
|+++....|+++||+++.++++ +..+ +.|||++|+|+++++.|.+++|+..+++.+++.++. ...++.++|++|
T Consensus 744 Mg~ng~d~aK~aAD~Vl~~~~~~gI~~a-i~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~ 819 (1034)
T 3ixz_A 744 MGIAGSDAAKNAADMILLDDNFASIVTG-VEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVS---VPLPLGCITILF 819 (1034)
T ss_pred eCCccCHHHHHhcCEEeccCCchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhhHHHHHHHH
Confidence 9645555599999999998665 6666 789999999999999999999999999999888774 334699999999
Q ss_pred HHHHHhhhhHhhhhccccCCChHHhhhCccchhccc-ccccccHHHHHHH-HHHHHHHHHHHHHHHHHhhccccccC---
Q 002029 742 YNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGV-QNILFSWTRILGW-ALNGVANAAIIFFFCIHAMKQQAFRK--- 816 (978)
Q Consensus 742 ~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~-~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~--- 816 (978)
+|++++.+|+++++.++ ++++.+.+.|+ .+ ++++++.++++.. +..|++++++.|+.+++.+...++..
T Consensus 820 inl~~d~~palal~~e~--~~~~~m~~~Pr----~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~ 893 (1034)
T 3ixz_A 820 IELCTDIFPSVSLAYEK--AESDIMHLRPR----NPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLC 893 (1034)
T ss_pred HHHHHHHHHHHHhhcCC--CChhhhhCCCC----CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccc
Confidence 99999999999999864 44555556665 44 5678998887654 45688888887777665443211100
Q ss_pred ----------C--------Cce-------ehhhHHHHHHHHHHHHHHHHHHHHhhcc-----h--hhHHHHHHHHHHHHH
Q 002029 817 ----------G--------GEV-------IGLEILGTTMYTCVVWVVNCQMALSVTY-----F--TYIQHLFIWGGITFW 864 (978)
Q Consensus 817 ----------~--------g~~-------~~~~~~~~~~f~~~v~~~~~~~~~~~~~-----~--~~~~~~~i~~si~~~ 864 (978)
. |.. .......|++|+++++.+.+..+. +++ | .++.|.++|+++++.
T Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~-~r~~~~s~~~~~~~~N~~l~~~~~~~ 972 (1034)
T 3ixz_A 894 VGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLI-RKTRRLSAFQQGFFRNRILVIAIVFQ 972 (1034)
T ss_pred cccccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHh-hccCCCcccccCCcccHHHHHHHHHH
Confidence 0 000 001236788999988887776653 332 2 235788899999999
Q ss_pred HHHHHHHhccCccccchhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCH
Q 002029 865 YIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLH 925 (978)
Q Consensus 865 ~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~~r~~~p~~ 925 (978)
+++++++.++|+ ++. +|+..+.++..|+.+++++++.++.+++.|++.|.+.++-
T Consensus 973 ~~l~~~~~~~p~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~~~~~~ 1027 (1034)
T 3ixz_A 973 VCIGCFLCYCPG-MPN-----IFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCCPGSW 1027 (1034)
T ss_pred HHHHHHHHHhhh-HHH-----HhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 999999999985 344 7778899999999999999999999999999999875543
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-88 Score=855.40 Aligned_cols=735 Identities=19% Similarity=0.218 Sum_probs=542.4
Q ss_pred CceeecCceeccCCeEEEEEEEeCccchhc---cccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 002029 42 QQLLLRDSKLRNTDCIYGAVIFTGRDTKVF---QNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDL 118 (978)
Q Consensus 42 ~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~ 118 (978)
+|++|+||.+.+ |+++|+|++||++|+++ .....++.++||+|+.+|+++.+++.+++++|++.++++..+.....
T Consensus 206 ~~~v~~GT~v~~-G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (995)
T 3ar4_A 206 KNMLFSGTNIAA-GKALGIVATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPV 284 (995)
T ss_dssp TTEECTTCEEEE-CEEEEEEEECGGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCS
T ss_pred cceEecCCEEEc-ceEEEEEEEcCcchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 389999999998 99999999999999764 44556778899999999999999998888877766554321111000
Q ss_pred ccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccccCCCccccc
Q 002029 119 QDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARAR 198 (978)
Q Consensus 119 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r 198 (978)
.. ..| .......|..++++++++||++||++++++.++++. +| +++++++|
T Consensus 285 ~~---~~~----------------~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~------~m----a~~~~lvr 335 (995)
T 3ar4_A 285 HG---GSW----------------IRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTR------RM----AKKNAIVR 335 (995)
T ss_dssp SS---SCH----------------HHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHH------HH----HHTTEEES
T ss_pred cc---chH----------------HHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHH------Hh----ccCCcEec
Confidence 00 011 122334577889999999999999999999999888 66 78899999
Q ss_pred CcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcccccCCcccCch
Q 002029 199 TSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDE 278 (978)
Q Consensus 199 ~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (978)
+++++|+||++++||||||||||+|+|+|+++++.+..++......+. .-.+... .+ ..
T Consensus 336 ~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~---~~~~~~~-------------~p-----~~ 394 (995)
T 3ar4_A 336 SLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEF---SITGSTY-------------AP-----EG 394 (995)
T ss_dssp CTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEE---EECCSSS-------------SS-----CC
T ss_pred cchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCccccccee---eccCCCc-------------CC-----cc
Confidence 999999999999999999999999999999998865443320000000 0000000 00 00
Q ss_pred hhh-cCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCC
Q 002029 279 RIM-NGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPV 357 (978)
Q Consensus 279 ~l~-~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~ 357 (978)
+.. +.........+.+++++.++++||++.++.++..+.. ...+||+|.||++++++.|+ +.. +...+........
T Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~-~~~g~p~E~Al~~~a~~~g~-~~~-~~~~i~~~~~~~~ 471 (995)
T 3ar4_A 395 EVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVY-EKVGEATETALTTLVEKMNV-FNT-EVRNLSKVERANA 471 (995)
T ss_dssp CEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEE-EEESCHHHHHHHHHHHHHCT-TCC-CCTTSCTTTSTTH
T ss_pred ccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCce-eecCCccHHHHHHHHHHcCC-ccc-ccccccccccccc
Confidence 000 0000111234567789999999999887654333322 23479999999999999887 211 1000000000000
Q ss_pred CCccceeEeeEeEeecCCCCCceEEEEEEeCCC-----eEEEEEeCCchHHHHHhccc---------chhhHHHHHHHHH
Q 002029 358 TGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEG-----TLLLLSKGADSVMFERLAEN---------GREFEEQTKEHIN 423 (978)
Q Consensus 358 ~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~ 423 (978)
.....+..|++++++||+|+||||||+++.++| ++.+|+||||+.|+++|... +++.++.+.++++
T Consensus 472 ~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~ 551 (995)
T 3ar4_A 472 CNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIK 551 (995)
T ss_dssp HHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHH
T ss_pred chhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHH
Confidence 000123579999999999999999999998766 68999999999999999753 2345677888999
Q ss_pred HH--HHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHH
Q 002029 424 EY--ADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKL 501 (978)
Q Consensus 424 ~~--a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L 501 (978)
+| +.+|+|||++|||+++.++ +..++ .+ ....+.+|+|++|+|+++++|++|++++++|+.|
T Consensus 552 ~~~~a~~GlRvLa~A~k~~~~~~----------~~~~~-~~-----~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l 615 (995)
T 3ar4_A 552 EWGTGRDTLRCLALATRDTPPKR----------EEMVL-DD-----SSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLC 615 (995)
T ss_dssp HHHHSTTCCEEEEEEEESSCCCG----------GGCCT-TC-----GGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHH
T ss_pred HHHhhhccceEEEEEEEecCccc----------ccccc-cc-----chhhhhhccCcEEEEEEeecCCCchhHHHHHHHH
Confidence 99 9999999999999986421 00011 11 1134678999999999999999999999999999
Q ss_pred HHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccC
Q 002029 502 AQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNE 581 (978)
Q Consensus 502 ~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (978)
+++||++||+|||+..||.++|+++||...+... .
T Consensus 616 ~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i-----~---------------------------------------- 650 (995)
T 3ar4_A 616 RDAGIRVIMITGDNKGTAIAICRRIGIFGENEEV-----A---------------------------------------- 650 (995)
T ss_dssp HHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCC-----T----------------------------------------
T ss_pred HHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcc-----c----------------------------------------
Confidence 9999999999999999999999999997543210 0
Q ss_pred CCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhcccc
Q 002029 582 SLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIG 661 (978)
Q Consensus 582 ~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvG 661 (978)
..+++|+++..+.++++.+.+. +..+|||++|+||+++|+.+|+ .|+.|+|+|||.||+|||++||||
T Consensus 651 -----~~~~~g~~~~~l~~~~~~~~~~------~~~v~~r~~P~~K~~~v~~l~~-~g~~v~~~GDG~ND~~alk~Advg 718 (995)
T 3ar4_A 651 -----DRAYTGREFDDLPLAEQREACR------RACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDAPALKKAEIG 718 (995)
T ss_dssp -----TTEEEHHHHHTSCHHHHHHHHH------HCCEEESCCSSHHHHHHHHHHT-TTCCEEEEECSGGGHHHHHHSTEE
T ss_pred -----ceEEEchhhhhCCHHHHHHHHh------hCcEEEEeCHHHHHHHHHHHHH-CCCEEEEEcCCchhHHHHHHCCeE
Confidence 0156777776555444443332 3569999999999999999998 699999999999999999999999
Q ss_pred ccccCCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHH
Q 002029 662 VGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFL 739 (978)
Q Consensus 662 I~i~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~ 739 (978)
|+|. +....|+++||+++.+ |..+.++ +.|||++|+|+++++.|.+++|+..+++.+++.++. ...++.++|+
T Consensus 719 iamg-~g~~~ak~aAd~vl~~~~~~~i~~~-i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g---~~~pl~~~qi 793 (995)
T 3ar4_A 719 IAMG-SGTAVAKTASEMVLADDNFSTIVAA-VEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG---LPEALIPVQL 793 (995)
T ss_dssp EEET-TSCHHHHHTCSEEETTCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CCCSSCHHHH
T ss_pred EEeC-CCCHHHHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---CcchHHHHHH
Confidence 9994 2222388999999987 6668888 899999999999999999999999988888887763 2346899999
Q ss_pred HHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcc-c-c--cc
Q 002029 740 SLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQ-Q-A--FR 815 (978)
Q Consensus 740 ~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~-~--~~ 815 (978)
+|+|++++.+|++++++++. +++.+.++|+ .++++++++++++.|++.|+++++++++.+++.+.. . . ..
T Consensus 794 l~~nl~~d~~p~l~l~~~~~--~~~~m~~~P~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 867 (995)
T 3ar4_A 794 LWVNLVTDGLPATALGFNPP--DLDIMDRPPR----SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVT 867 (995)
T ss_dssp HHHHHTTTHHHHHHHTTCCC--CTTGGGSCCC----CTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCT
T ss_pred HHHHHHHHHHHHHhhccCCC--ChhHHhCCCC----CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 99999999999999999764 4456666676 566789999999999999999998887654443211 0 0 00
Q ss_pred -----------CCCcee--------hhhHHHHHHHHHHHHHHHHHHHHhhcc-----h--hhHHHHHHHHHHHHHHHHHH
Q 002029 816 -----------KGGEVI--------GLEILGTTMYTCVVWVVNCQMALSVTY-----F--TYIQHLFIWGGITFWYIFLL 869 (978)
Q Consensus 816 -----------~~g~~~--------~~~~~~~~~f~~~v~~~~~~~~~~~~~-----~--~~~~~~~i~~si~~~~i~~~ 869 (978)
.++... ......|++|+++++.+.++.+. +++ | ..+.+.++++++++.+++++
T Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~-~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~ 946 (995)
T 3ar4_A 868 YHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALN-SLSENQSLMRMPPWVNIWLLGSICLSMSLHF 946 (995)
T ss_dssp TCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHT-TSCSSCCTTTSCGGGCHHHHHHHHHHHHHHH
T ss_pred cchhccccccccccccccccccccccchhhhhHHHHHHHHHHHHHHHH-hhccccchhccCCccCHHHHHHHHHHHHHHH
Confidence 000000 11246799999999888777653 221 1 23456677777777777777
Q ss_pred HHhccCccccchhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002029 870 AYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRF 921 (978)
Q Consensus 870 i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~~r~~ 921 (978)
++.++|. ++. +|+..+.++.+|+.+++++++.++++++.|+++|.|
T Consensus 947 ~~~~~p~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 992 (995)
T 3ar4_A 947 LILYVDP-LPM-----IFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNY 992 (995)
T ss_dssp HHHHSTH-HHH-----HTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHS
T ss_pred HHHHHHH-HHH-----hhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 7777774 233 666788999999999999999999999999998866
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-87 Score=844.96 Aligned_cols=737 Identities=18% Similarity=0.206 Sum_probs=557.2
Q ss_pred eeEEE-EEEC-----CccccC------------CcCceeecCceeccCCeEEEEEEEeCccchh---ccccCCCCCCcCH
Q 002029 25 TFVGS-LELE-----EQQYPL------------TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSK 83 (978)
Q Consensus 25 ~f~G~-~~~~-----~~~~pl------------~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~~k~s~ 83 (978)
-.+|. +.+| ||+.|+ +.+|++|+||.+.+ |+++|+|++||++|++ +++...++.++||
T Consensus 210 ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~-G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~ 288 (1028)
T 2zxe_A 210 IISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVE-GTARGVVVYTGDRTVMGRIATLASGLEVGRTP 288 (1028)
T ss_dssp EEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEE-EEEEEEEEECGGGSHHHHHHHHHHHSCCCCCH
T ss_pred EEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEc-ceEEEEEEEeccccHHHHHHHhccCCCCCCCc
Confidence 34564 5665 787775 23478999999998 9999999999999965 4555677888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccc
Q 002029 84 VERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPI 163 (978)
Q Consensus 84 l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~ 163 (978)
+|+.+++++.+++.+.++++++.+++. +|.+. .| ...+..++++++++||+
T Consensus 289 lq~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~~--------~~--------------------~~~~~~~i~llv~~iP~ 339 (1028)
T 2zxe_A 289 IAIEIEHFIHIITGVAVFLGVSFFILS-LILGY--------SW--------------------LEAVIFLIGIIVANVPE 339 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTC--------CH--------------------HHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHccC--------cH--------------------HHHHHHHHHHHHHHcCc
Confidence 999999999999998888888776653 23221 22 12566677888899999
Q ss_pred hhhhhHHHHHHHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchH
Q 002029 164 SLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTE 243 (978)
Q Consensus 164 sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~ 243 (978)
+||++++++.++++. +| +++++++|+++++|+||++++||||||||||+|+|+|.++++++..|.....+
T Consensus 340 ~Lp~~vti~l~~~~~------~m----ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ 409 (1028)
T 2zxe_A 340 GLLATVTVCLTLTAK------RM----ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE 409 (1028)
T ss_dssp THHHHHHHHHHHHHH------HH----HTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCT
T ss_pred hHHHHHHHHHHHHHH------HH----hhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCC
Confidence 999999999999988 66 88999999999999999999999999999999999999999988766432110
Q ss_pred HHHHHHhhcCCCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCc--EEEe
Q 002029 244 VERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGK--ISYE 321 (978)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~--~~y~ 321 (978)
. ..+. ..+..++..++++.++++||++..+.+.+... ..+.
T Consensus 410 ~-------------------------~~~~------------~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~ 452 (1028)
T 2zxe_A 410 N-------------------------QSGA------------AFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSV 452 (1028)
T ss_dssp T-------------------------CCSC------------CCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCE
T ss_pred C-------------------------cccc------------ccccCCHHHHHHHHHHHhcCCCeeecCCCCCcccccee
Confidence 0 0000 00112345678899999999988754322110 1123
Q ss_pred cCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeC---CCeEEEEEeC
Q 002029 322 AESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE---EGTLLLLSKG 398 (978)
Q Consensus 322 ~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KG 398 (978)
.+||+|.||+++|++.|.... ..+..|+++.++||+|+||||+++++.+ ++++++|+||
T Consensus 453 ~gdp~E~Al~~~a~~~~~~~~------------------~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KG 514 (1028)
T 2zxe_A 453 AGDASESALLKCIELCCGSVQ------------------GMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKG 514 (1028)
T ss_dssp ESCHHHHHHHHHHHHHHSCHH------------------HHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEE
T ss_pred CCCchHHHHHHHHHHhCCCHH------------------HHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeC
Confidence 579999999999988642110 0135688999999999999999999974 5788999999
Q ss_pred CchHHHHHhccc---------chhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHH
Q 002029 399 ADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEE 469 (978)
Q Consensus 399 a~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~ 469 (978)
||+.|+++|... +++.++.+.+++++|+.+|+|||++|+|+++++++.++. . .+++
T Consensus 515 A~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~--------~--~~~~----- 579 (1028)
T 2zxe_A 515 APERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGY--------P--FDAD----- 579 (1028)
T ss_dssp CHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTC--------C--CCTT-----
T ss_pred CcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCcccccccc--------c--cchh-----
Confidence 999999999752 234567788999999999999999999999765432210 0 0110
Q ss_pred HHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccc
Q 002029 470 IAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLE 549 (978)
Q Consensus 470 ~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~ 549 (978)
..+.+|+|++|+|+++++||+|++++++|++|+++||++||+|||+..||.+||++|||..+++..+
T Consensus 580 ~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i------------- 646 (1028)
T 2zxe_A 580 EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETI------------- 646 (1028)
T ss_dssp TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCH-------------
T ss_pred hhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhH-------------
Confidence 0123578999999999999999999999999999999999999999999999999999976543210
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHH
Q 002029 550 KSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKAL 629 (978)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~ 629 (978)
.+ ...+........ ........+++|+++..+.++++. ++...++.++|||++|+||..
T Consensus 647 --------~~-----~~~~~~~~~~~~----~~~~~~~~vi~G~~l~~~~~~~l~----~~~~~~~~~v~ar~~P~~K~~ 705 (1028)
T 2zxe_A 647 --------ED-----IAARLNIPIGQV----NPRDAKACVVHGSDLKDLSTEVLD----DILHYHTEIVFARTSPQQKLI 705 (1028)
T ss_dssp --------HH-----HHHHTTCCGGGS----CGGGCCEEEEEHHHHTTCCHHHHH----HHHHHCSEEEEESCCHHHHHH
T ss_pred --------HH-----HHhhcCcchhhc----cccccceEEEEcHHhhhCCHHHHH----HHHhhCCcEEEEEcCHHHHHH
Confidence 00 000000000000 112234678999998876654443 344456678999999999999
Q ss_pred HHHHHHccCCCeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHH
Q 002029 630 VTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICY 707 (978)
Q Consensus 630 iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~ 707 (978)
+|+.+|+ .|++|+|+|||.||+|||++|||||+|+.+....|+++||+++.+ |..+.++ +.|||++|+|+++++.|
T Consensus 706 iV~~lq~-~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~-i~~gR~i~~ni~k~i~~ 783 (1028)
T 2zxe_A 706 IVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAY 783 (1028)
T ss_dssp HHHHHHH-TTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh-CCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9999998 789999999999999999999999999522223388999999987 6668888 89999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHH
Q 002029 708 FFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRI 787 (978)
Q Consensus 708 ~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~ 787 (978)
.+++|+..+++.+++.++. ...+++++|++|+|++++.+|++++++++ +.++.+.++|+ ..+.+++++++++
T Consensus 784 ~l~~n~~~~~~~~~~~~~~---~~~~l~~~qil~inl~~d~~pa~al~~e~--~~~~~m~~~Pr---~~~~~~l~~~~~~ 855 (1028)
T 2zxe_A 784 TLTSNIPEITPFLVFIIGN---VPLPLGTVTILCIDLGTDMVPAISLAYEQ--AESDIMKRQPR---NPKTDKLVNERLI 855 (1028)
T ss_dssp HHHTTHHHHHHHHHHHHHC---CCCSSCHHHHHHHHTTTTHHHHHHGGGCC--CSSCGGGSCCC---CTTTCCSSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHc---ccchhHHHHHHHHHHHHHHHHHHHhccCc--cchhhhccCCC---CcccccccCHHHH
Confidence 9999999988888887764 23458999999999999999999998753 34455556665 1233489999987
Q ss_pred HH-HHHHHHHHHHHHHHHHHHhhccccc-------------c--------CCCcee-------hhhHHHHHHHHHHHHHH
Q 002029 788 LG-WALNGVANAAIIFFFCIHAMKQQAF-------------R--------KGGEVI-------GLEILGTTMYTCVVWVV 838 (978)
Q Consensus 788 ~~-~~~~~~~~s~~~~~~~~~~~~~~~~-------------~--------~~g~~~-------~~~~~~~~~f~~~v~~~ 838 (978)
+. |+..|++++++.|+.+++.+....+ . ..|... ......|++|+++++.+
T Consensus 856 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q 935 (1028)
T 2zxe_A 856 SMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQ 935 (1028)
T ss_dssp HHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 76 5688999999888776654321111 0 001111 11256899999999988
Q ss_pred HHHHHHh-hcchhh----HHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Q 002029 839 NCQMALS-VTYFTY----IQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFT 913 (978)
Q Consensus 839 ~~~~~~~-~~~~~~----~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~ 913 (978)
.+..+.. ++..++ +.|.++++++++.+++++++.++|+ ++. +|+..+.++..|+.++.++++.++.+++
T Consensus 936 ~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~ 1009 (1028)
T 2zxe_A 936 WADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPG-TDV-----ALRMYPLKPSWWFCAFPYSLIIFLYDEM 1009 (1028)
T ss_dssp HHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTT-HHH-----HTCCCCCCGGGGGTTHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHHHHhhh-HHh-----hhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 8777532 222222 3466788888888888888888885 233 6667889999999999999999999999
Q ss_pred HHHHHHhh
Q 002029 914 YSAIQMRF 921 (978)
Q Consensus 914 ~k~~~r~~ 921 (978)
.|++.|.+
T Consensus 1010 ~k~~~r~~ 1017 (1028)
T 2zxe_A 1010 RRFIIRRS 1017 (1028)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHcc
Confidence 99988765
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-79 Score=753.32 Aligned_cols=636 Identities=17% Similarity=0.177 Sum_probs=469.8
Q ss_pred CccccC--CcCceeecCceeccCCeEEEEEEEeCccchhccc---cCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002029 34 EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQN---STGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSI 108 (978)
Q Consensus 34 ~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~---~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i 108 (978)
||+.|+ ..+|++|+||.+.+ |+++++|++||.+|++++. ...++.+++++++.++++..+++++.++++++.++
T Consensus 232 GES~PV~K~~gd~v~sGT~v~~-G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~ 310 (920)
T 1mhs_A 232 GESLAVDKHKGDQVFASSAVKR-GEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWV 310 (920)
T ss_dssp SCCCCEECCSSCEECSCBCCSC-CCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcceEecCCCeeecCceEec-ceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899988 67899999999997 9999999999999987554 44566788999999999998888777666654433
Q ss_pred HHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhcccccc
Q 002029 109 FFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYY 188 (978)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~ 188 (978)
.+. +.+. . +...+..++++++.+|||+||++++++.++++. +|
T Consensus 311 ~~~-~~~~--------~--------------------~~~~l~~av~llV~aiP~aLp~~vti~la~g~~------~m-- 353 (920)
T 1mhs_A 311 SSF-YRSN--------P--------------------IVQILEFTLAITIIGVPVGLPAVVTTTMAVGAA------YL-- 353 (920)
T ss_dssp TTT-TTTC--------C--------------------HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH------HH--
T ss_pred HHH-hcCC--------c--------------------HHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHH------HH--
Confidence 211 1000 1 123677889999999999999999999999888 55
Q ss_pred ccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhccc
Q 002029 189 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 268 (978)
Q Consensus 189 ~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (978)
+++++++|+++++|+||++++||||||||||+|+|+|.+++..+. +.
T Consensus 354 --ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g-~~------------------------------ 400 (920)
T 1mhs_A 354 --AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG-VD------------------------------ 400 (920)
T ss_dssp --HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSC-CC------------------------------
T ss_pred --HhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCC-CC------------------------------
Confidence 788999999999999999999999999999999999987653211 00
Q ss_pred ccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCce
Q 002029 269 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTS 348 (978)
Q Consensus 269 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~ 348 (978)
+ .+++.+.++|+.... .++||+|.|+++++++.+...
T Consensus 401 --------------------~-----~~ll~~a~l~~~~~~-----------~~~~P~e~Al~~~~~~~~~~~------- 437 (920)
T 1mhs_A 401 --------------------P-----EDLMLTACLAASRKK-----------KGIDAIDKAFLKSLKYYPRAK------- 437 (920)
T ss_dssp --------------------C-----THHHHHHHHSCCCSS-----------CSCCSHHHHHHHHHHHSSSCC-------
T ss_pred --------------------H-----HHHHHHHHHhcCCcc-----------cCCChHHHHHHHHHHhcccch-------
Confidence 0 135566778875421 124999999999998875310
Q ss_pred eEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhccc---chhhHHHHHHHHHHH
Q 002029 349 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN---GREFEEQTKEHINEY 425 (978)
Q Consensus 349 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---~~~~~~~~~~~l~~~ 425 (978)
.....|+++..+||+|.||||+++++.++|+.++++||||+.|+++|... +++.++.+.++++++
T Consensus 438 ------------~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~ 505 (920)
T 1mhs_A 438 ------------SVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEF 505 (920)
T ss_dssp ------------GGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHH
T ss_pred ------------hhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHH
Confidence 01256889999999999999999999888888999999999999999752 334566788899999
Q ss_pred HHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcC
Q 002029 426 ADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAG 505 (978)
Q Consensus 426 a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aG 505 (978)
+.+|+|||++|+|.. |++++|+|+++++||+|++++++|++|+++|
T Consensus 506 a~~G~RvL~vA~~~~----------------------------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aG 551 (920)
T 1mhs_A 506 ATRGFRSLGVARKRG----------------------------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLG 551 (920)
T ss_dssp HTSSCCCCEECCCSS----------------------------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHT
T ss_pred HhCCCEEEEEEEecc----------------------------------ccccEEEEEEEEeccccccHHHHHHHHhhcC
Confidence 999999999998731 3689999999999999999999999999999
Q ss_pred CeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCC
Q 002029 506 IKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGP 585 (978)
Q Consensus 506 Ikv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (978)
|++||+|||+..||.+||+++||..... +.+.
T Consensus 552 I~v~MiTGD~~~TA~aIA~~lGI~~~~~-----~~~~------------------------------------------- 583 (920)
T 1mhs_A 552 LSIKMLTGDAVGIARETSRQLGLGTNIY-----NAER------------------------------------------- 583 (920)
T ss_dssp CEEEEEESSCHHHHHHHHHHHTSSCSCC-----CSSS-------------------------------------------
T ss_pred ceEEEEcCCCHHHHHHHHHHcCCCcccc-----Cccc-------------------------------------------
Confidence 9999999999999999999999964210 0000
Q ss_pred eEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhcccccccc
Q 002029 586 LALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGIS 665 (978)
Q Consensus 586 ~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~ 665 (978)
++++|. ..+.++++.+. . .+..+|+|++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+|+
T Consensus 584 --~~~~g~--~~~~~~el~~~----~--~~~~V~arv~P~~K~~iV~~Lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg 652 (920)
T 1mhs_A 584 --LGLGGG--GDMPGSEVYDF----V--EAADGFAEVFPQHKYNVVEILQQ-RGYLVAMTGDGVNDAPSLKKADTGIAVE 652 (920)
T ss_dssp --SSSCBC--CCGGGGGGGTT----T--TTTSCEESCCSTHHHHHHHHHHT-TTCCCEECCCCGGGHHHHHHSSEEEEET
T ss_pred --eeecCc--ccCCHHHHHHH----H--hhCeEEEEeCHHHHHHHHHHHHh-CCCeEEEEcCCcccHHHHHhCCcCcccc
Confidence 011111 00111111111 1 13359999999999999999998 7999999999999999999999999996
Q ss_pred CCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHH
Q 002029 666 GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYN 743 (978)
Q Consensus 666 g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n 743 (978)
+. ...|+++||+++.+ |..+.++ +.+||++|+|+++++.|.++.|+.+....+++..+. +.+ +++.+++|.|
T Consensus 653 ~g-td~ak~aADiVl~~~~~~~I~~a-i~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~---~~~-l~~~~il~~~ 726 (920)
T 1mhs_A 653 GS-SDAARSAADIVFLAPGLGAIIDA-LKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAIL---NRS-LNIELVVFIA 726 (920)
T ss_dssp TS-CHHHHHSSSEEESSCCSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---SCC-CCHHHHHHHH
T ss_pred cc-cHHHHHhcCeEEcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcc-CCHHHHHHHH
Confidence 32 23388999999987 6668888 899999999999999999999998744433333333 444 6778888888
Q ss_pred HHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCceehh
Q 002029 744 VFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGL 823 (978)
Q Consensus 744 ~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~ 823 (978)
++.+. |++++++++.+.+ +.|+-++. . ..++..++.|++.++..++.+++.+... ...+.....
T Consensus 727 l~~d~-~~lal~~e~~~~~-----~~P~~~~~---~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 790 (920)
T 1mhs_A 727 IFADV-ATLAIAYDNAPYS-----QTPVKWNL---P-----KLWGMSVLLGVVLAVGTWITVTTMYAQG--ENGGIVQNF 790 (920)
T ss_dssp HHHTT-HHHHCCCCCSGGG-----GSCCCCCS---S-----SCSSCHHHHHHHHHHHHHHHHHHHTTTT--TTCCSSSSS
T ss_pred HHHHH-HhhhhcccCcccc-----cCCCCchH---H-----HHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccccccchh
Confidence 88885 9999988754321 44542111 1 1222234566666666555544333210 011111112
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcc----hhhHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhcCChHHHHH
Q 002029 824 EILGTTMYTCVVWVVNCQMALSVTY----FTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLI 899 (978)
Q Consensus 824 ~~~~~~~f~~~v~~~~~~~~~~~~~----~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~ 899 (978)
....|++|+++++.+.+..+ .+|+ |....+..+++++++..+++..+.++| . |...+.++..|+.
T Consensus 791 ~~~~T~~f~~lv~~~~~~~~-~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------f~~~~l~~~~~~~ 859 (920)
T 1mhs_A 791 GNMDEVLFLQISLTENWLIF-ITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWG-W---------FEHSDTSIVAVVR 859 (920)
T ss_dssp SSHHHHHHHHHHHHHHHHTT-SSSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHSSS-S---------TTSCSHHHHTHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH-HhccchhhhcCchHHHHHHHHHHHHHHHHHHHHhh-h---------hccCCCCHHHHHH
Confidence 24789999999998877765 3332 222244555566665655665555555 2 2245677888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 002029 900 TLLVLMSSLLPYFTYSAIQMRF 921 (978)
Q Consensus 900 il~~~~~~ll~~~~~k~~~r~~ 921 (978)
+++++++.++...+.|++.+..
T Consensus 860 ~~~~~~~~~~~~e~~k~~~~~~ 881 (920)
T 1mhs_A 860 IWIFSFGIFCIMGGVYYILQDS 881 (920)
T ss_dssp HHHHTTHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHhhh
Confidence 9988888888888888766554
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-77 Score=736.76 Aligned_cols=646 Identities=17% Similarity=0.187 Sum_probs=449.5
Q ss_pred CCccccC--CcCceeecCceeccCCeEEEEEEEeCccchhccccC--CCCCCcCHHHHHHHHHHHHHHH-HHHHHHHHHH
Q 002029 33 EEQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNST--GPPSKRSKVERRMDKIIYFLFG-ILVLMSFIGS 107 (978)
Q Consensus 33 ~~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~~~--~~~~k~s~l~~~~n~~~~~~~~-~~~~~~~i~~ 107 (978)
+||+.|+ .++|++|+||.+.+ |+++++|++||.+|++++... ....+++++|+.++++..+++. +.++++++.+
T Consensus 182 TGES~Pv~K~~g~~v~~GT~v~~-G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~ 260 (885)
T 3b8c_A 182 TGESLPVTKHPGQEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEII 260 (885)
T ss_dssp TCCSSCCCBSSCCCCCSCCCCCS-CCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHST
T ss_pred CCCCcceEecCCCccccCeEEee-eEEEEEEEEcCcccHHHHHHHHHhcccccChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3899998 56899999999998 999999999999997754322 1256789999999999877433 2222222221
Q ss_pred HHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccc
Q 002029 108 IFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMY 187 (978)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~ 187 (978)
+.+. +.+. .|. ..+.+++++++++||++||++++++.++++. +|
T Consensus 261 ~~~~-~~~~--------~~~--------------------~~~~~~v~llv~aiP~aLp~~vti~la~g~~------r~- 304 (885)
T 3b8c_A 261 VMYP-IQRR--------KYR--------------------DGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH------RL- 304 (885)
T ss_dssp TTTT-TTCS--------CST--------------------THHHHHHHHTTTTCCSSTTTHHHHTTTHHHH------HH-
T ss_pred HHHH-HccC--------cHH--------------------HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH------HH-
Confidence 1111 1100 121 1578899999999999999999999988887 66
Q ss_pred cccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcc
Q 002029 188 YEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDK 267 (978)
Q Consensus 188 ~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (978)
+++++++|+++++|+||++++||||||||||+|+|+|.++.+. .++.+.
T Consensus 305 ---ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~~~~-------------------------- 353 (885)
T 3b8c_A 305 ---SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFCKGV-------------------------- 353 (885)
T ss_dssp ---TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSCSST--------------------------
T ss_pred ---HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--ccCCCC--------------------------
Confidence 8999999999999999999999999999999999999643210 011000
Q ss_pred cccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCc
Q 002029 268 ASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQT 347 (978)
Q Consensus 268 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~ 347 (978)
..++++...++|+... ++||.|.|+++++.+..
T Consensus 354 -------------------------~~~~ll~~aa~~~~~~-------------~~~p~~~Al~~~~~~~~--------- 386 (885)
T 3b8c_A 354 -------------------------EKDQVLLFAAMASRVE-------------NQDAIDAAMVGMLADPK--------- 386 (885)
T ss_dssp -------------------------THHHHHHHHHHHCCSS-------------SCCSHHHHHHHTTCCTT---------
T ss_pred -------------------------CHHHHHHHHHHHhCCC-------------CCCchHHHHHHHhhchh---------
Confidence 0125677778887641 36999999998764310
Q ss_pred eeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchhhHHHHHHHHHHHHH
Q 002029 348 SISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYAD 427 (978)
Q Consensus 348 ~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~ 427 (978)
. .+..|+++..+||+|+||||+++++..+|+.++++||||+.|+++|... ...++.+.+++++++.
T Consensus 387 --------~-----~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~~~~~~~~a~ 452 (885)
T 3b8c_A 387 --------E-----ARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKAS-NDLSKKVLSIIDKYAE 452 (885)
T ss_dssp --------C-----CCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCC-STTTTTHHHHHHHHTT
T ss_pred --------h-----HhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCc-hhhHHHHHHHHHHHHh
Confidence 0 1246788899999999999999998778888899999999999999743 2345567888999999
Q ss_pred ccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcCCe
Q 002029 428 AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIK 507 (978)
Q Consensus 428 ~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIk 507 (978)
+|+|||++|+|++++++ .+..|+|++|+|+++++||+|++++++|++|+++||+
T Consensus 453 ~G~rvl~vA~~~~~~~~--------------------------~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~ 506 (885)
T 3b8c_A 453 RGLRSLAVARQVVPEKT--------------------------KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVN 506 (885)
T ss_dssp TTCEEEEECCBCCCSSS--------------------------SSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCC
T ss_pred CCCeEEEEEEecccccc--------------------------ccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCc
Confidence 99999999999886532 0235789999999999999999999999999999999
Q ss_pred EEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeE
Q 002029 508 LWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLA 587 (978)
Q Consensus 508 v~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (978)
+||+|||+..||.+||+++||..+.. +..
T Consensus 507 v~MiTGD~~~tA~~iA~~lGi~~~~~-----~~~---------------------------------------------- 535 (885)
T 3b8c_A 507 VKMITGDQLAIGKETGRRLGMGTNMY-----PSS---------------------------------------------- 535 (885)
T ss_dssp CEEEESSCHHHHTHHHHTTTCTTCCS-----TTS----------------------------------------------
T ss_pred EEEEcCCChHHHHHHHHHhCCccccC-----Ccc----------------------------------------------
Confidence 99999999999999999999954210 000
Q ss_pred EEEcCchhhh-hchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhccccccccC
Q 002029 588 LIIDGKSLTY-ALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISG 666 (978)
Q Consensus 588 lvi~G~~l~~-~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~g 666 (978)
++.|.+++. +.+.++.+.. . +..+|+|++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+|++
T Consensus 536 -~l~g~~~~~~~~~~~l~~~~----~--~~~v~arv~P~~K~~iV~~lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg~ 607 (885)
T 3b8c_A 536 -ALLGTHKDANLASIPVEELI----E--KADGFAGVFPEHKYEIVKKLQE-RKHIVGMTGDGVNDAPALKKADIGIAVAD 607 (885)
T ss_dssp -SCCBGGGGTTSCCSCHHHHH----H--TSCCEECCCHHHHHHHHHHHHH-TTCCCCBCCCSSTTHHHHHHSSSCCCCSS
T ss_pred -eeeccccccccchhHHHHHH----h--hCcEEEEECHHHHHHHHHHHHH-CCCeEEEEcCCchhHHHHHhCCEeEEeCC
Confidence 122322222 1111222221 1 3349999999999999999998 79999999999999999999999999963
Q ss_pred Cccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHH
Q 002029 667 VEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNV 744 (978)
Q Consensus 667 ~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~ 744 (978)
....|+++||+++.+ |..+..+ +.+||++|+|+++++.|.+..|+..++..++..+ ++ ..++++++++|+|+
T Consensus 608 -gtd~ak~aADivl~~~~~~~I~~a-i~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~~--~~--~~~l~p~~il~i~l 681 (885)
T 3b8c_A 608 -ATDAARGASDIVLTEPGLSVIISA-VLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIAL--IW--EFDFSAFMVLIIAI 681 (885)
T ss_dssp -SHHHHGGGCSSCCSSCSHHHHTHH-HHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHHHS--SC--SSCSCHHHHHHHHH
T ss_pred -ccHHHHHhcceeeccCchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cc--CcCcCHHHHHHHHH
Confidence 223388999999988 5557788 8999999999999999999999876554444433 22 23588999999999
Q ss_pred HHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccccccC-CCce---
Q 002029 745 FFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRK-GGEV--- 820 (978)
Q Consensus 745 i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~-~g~~--- 820 (978)
+.+..+ ++++....++ |+ .++...+ ...+..+++.|++++++.++++++......+.. .|..
T Consensus 682 ~~d~~~-l~l~~~~~~~--------~~----~p~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (885)
T 3b8c_A 682 LNDGTI-MTISKDRVKP--------SP----TPDSWKL-KEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIR 747 (885)
T ss_dssp HHHTTT-CCCCCCCCCC--------SS----CCCSTTT-TTTTTTHHHHHSSTHHHHTTSSSCTTTTTTTTCCCCSSCCG
T ss_pred HHHHHH-HhhcccccCc--------cc----CCcchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccCccccc
Confidence 999765 7776543221 11 1112222 334555677888888877765444322111100 0100
Q ss_pred ehhhHHHHHHHH-HHHHHHHHHHHHhhcc--hhhHHHHHHH---HHHHHHHHHHHHHhccCccccchhHHHHHHHhcCCh
Q 002029 821 IGLEILGTTMYT-CVVWVVNCQMALSVTY--FTYIQHLFIW---GGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAP 894 (978)
Q Consensus 821 ~~~~~~~~~~f~-~~v~~~~~~~~~~~~~--~~~~~~~~i~---~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~ 894 (978)
.....+.+.+|. .+++.+ +. .+.+|+ ++|+.+...+ ..++..++.+++..+.+. . ++...+.++
T Consensus 748 ~~~~~~~t~~~~~~~~~~~-~~-~~~~Rs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~l~~ 817 (885)
T 3b8c_A 748 DNNHELMGAVYLQVSIISQ-AL-IFVTRSRSWSFVERPGALLMIAFLIAQLIATLIAVYANW---E-----FAKIRGIGW 817 (885)
T ss_dssp GGTHHHHTTTTTTTSSTTG-GG-TTCSSSCTTTSTTSTTTTTSGGGSSTTTTTTSSSSSCCC---C-----SSCCCCCTT
T ss_pred chHHHHHHHHHHHHHHHHH-HH-HHHhccCCCCcccCccHHHHHHHHHHHHHHHHHHHhccc---c-----ccccCCchH
Confidence 001223344343 333332 32 344444 3333322111 111111111111122111 0 223567788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 002029 895 SFWLITLLVLMSSLLPYFTYSAIQMRFF 922 (978)
Q Consensus 895 ~~wl~il~~~~~~ll~~~~~k~~~r~~~ 922 (978)
..|+.+++.+++.+++..+.|++.|+..
T Consensus 818 ~~~~~~~~~~~~~~~~~e~~k~~~~~~~ 845 (885)
T 3b8c_A 818 GWAGVIWLYSIVTYFPLDVFKFAIRYIL 845 (885)
T ss_dssp TTHHHHHHHTGGGTHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 8898888888888899999998877643
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-54 Score=522.05 Aligned_cols=413 Identities=20% Similarity=0.266 Sum_probs=337.4
Q ss_pred CCccccC--CcCceeecCceeccCCeEEEEEEEeCccc---hhccccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002029 33 EEQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDT---KVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGS 107 (978)
Q Consensus 33 ~~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~T---ki~~~~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~ 107 (978)
+||+.|+ .+++.+++||.+.+ |.+++.|++||.+| |+.++...++.+++|+|+.+|++..+++++.++++++++
T Consensus 277 TGES~Pv~K~~gd~v~~Gt~~~~-G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~ 355 (736)
T 3rfu_A 277 TGEPIPVAKEASAKVIGATINQT-GSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSF 355 (736)
T ss_dssp TTCSSCEEECTTCEECTTCEEES-CCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccEEeccCCcCCCceEecc-ceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3899987 77999999999997 99999999999999 455556667778899999999999999999999999888
Q ss_pred HHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccc
Q 002029 108 IFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMY 187 (978)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~ 187 (978)
++|.++.... .| ...+.+++++++.+|||+|+++++++...+.. ++
T Consensus 356 ~~w~~~~~~~-------~~--------------------~~~l~~ai~vlviacPcaL~la~p~a~~~~~~------~~- 401 (736)
T 3rfu_A 356 IVWALLGPQP-------AL--------------------SYGLIAAVSVLIIACPCALGLATPMSIMVGVG------KG- 401 (736)
T ss_dssp HHHHHHCSSS-------ST--------------------THHHHHHHHHHHHHCCSTHHHHHHHHHHHHHH------HH-
T ss_pred HHHHHhCCCc-------hH--------------------HHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHH------HH-
Confidence 7766543211 12 12688899999999999999999999999888 45
Q ss_pred cccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcc
Q 002029 188 YEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDK 267 (978)
Q Consensus 188 ~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (978)
+++++++|+++.+|+||++|+||||||||||+|+|+|.++..++.. +
T Consensus 402 ---a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~------~------------------------ 448 (736)
T 3rfu_A 402 ---AQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDFV------E------------------------ 448 (736)
T ss_dssp ---HHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESSSC------H------------------------
T ss_pred ---hhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEecCCC------H------------------------
Confidence 7899999999999999999999999999999999999998733210 0
Q ss_pred cccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCc
Q 002029 268 ASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQT 347 (978)
Q Consensus 268 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~ 347 (978)
.+++...+.+ ++.++||++.|++++|++.|+.+.
T Consensus 449 ---------------------------~~~l~~aa~l--------------e~~s~hPla~Aiv~~a~~~~~~~~----- 482 (736)
T 3rfu_A 449 ---------------------------DNALALAAAL--------------EHQSEHPLANAIVHAAKEKGLSLG----- 482 (736)
T ss_dssp ---------------------------HHHHHHHHHH--------------HHSSCCHHHHHHHHHHHTTCCCCC-----
T ss_pred ---------------------------HHHHHHHHHH--------------hhcCCChHHHHHHHHHHhcCCCcc-----
Confidence 1122222211 112469999999999998775431
Q ss_pred eeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchhhHHHHHHHHHHHHH
Q 002029 348 SISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYAD 427 (978)
Q Consensus 348 ~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~ 427 (978)
...+|++.+++. +.... +|+. +.+|+++.+.+.... .+...+.+++++.
T Consensus 483 ----------------------~~~~f~~~~g~g-v~~~~-~g~~--~~~G~~~~~~~~~~~-----~~~~~~~~~~~~~ 531 (736)
T 3rfu_A 483 ----------------------SVEAFEAPTGKG-VVGQV-DGHH--VAIGNARLMQEHGGD-----NAPLFEKADELRG 531 (736)
T ss_dssp ----------------------CCSCCCCCTTTE-EEECS-SSSC--EEEESHHHHHHHCCC-----CHHHHHHHHHHHH
T ss_pred ----------------------CcccccccCCce-EEEEE-CCEE--EEEcCHHHHHHcCCC-----hhHHHHHHHHHHh
Confidence 123566666553 22222 3432 345999877553221 2346677889999
Q ss_pred ccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcCCe
Q 002029 428 AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIK 507 (978)
Q Consensus 428 ~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIk 507 (978)
+|+|++++| .|.+++|+++++|++|++++++|++|+++||+
T Consensus 532 ~G~~vl~va---------------------------------------~d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~ 572 (736)
T 3rfu_A 532 KGASVMFMA---------------------------------------VDGKTVALLVVEDPIKSSTPETILELQQSGIE 572 (736)
T ss_dssp TTCEEEEEE---------------------------------------ETTEEEEEEEEECCBCSSHHHHHHHHHHHTCE
T ss_pred cCCeEEEEE---------------------------------------ECCEEEEEEEeeccchhhHHHHHHHHHHCCCe
Confidence 999999999 46689999999999999999999999999999
Q ss_pred EEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeE
Q 002029 508 LWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLA 587 (978)
Q Consensus 508 v~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (978)
++|+|||+..+|..+|+++|+..
T Consensus 573 v~mlTGd~~~~a~~ia~~lgi~~--------------------------------------------------------- 595 (736)
T 3rfu_A 573 IVMLTGDSKRTAEAVAGTLGIKK--------------------------------------------------------- 595 (736)
T ss_dssp EEEECSSCHHHHHHHHHHHTCCC---------------------------------------------------------
T ss_pred EEEECCCCHHHHHHHHHHcCCCE---------------------------------------------------------
Confidence 99999999999999999999831
Q ss_pred EEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhccccccccCC
Q 002029 588 LIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGV 667 (978)
Q Consensus 588 lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~g~ 667 (978)
++++++|++|..+|+.+++ .++.|+|+|||.||+|||++|||||+|.+
T Consensus 596 ------------------------------v~a~~~P~~K~~~v~~l~~-~g~~V~~vGDG~ND~paL~~AdvGIAmg~- 643 (736)
T 3rfu_A 596 ------------------------------VVAEIMPEDKSRIVSELKD-KGLIVAMAGDGVNDAPALAKADIGIAMGT- 643 (736)
T ss_dssp ------------------------------EECSCCHHHHHHHHHHHHH-HSCCEEEEECSSTTHHHHHHSSEEEEESS-
T ss_pred ------------------------------EEEecCHHHHHHHHHHHHh-cCCEEEEEECChHhHHHHHhCCEEEEeCC-
Confidence 8999999999999999998 78999999999999999999999999953
Q ss_pred ccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHH
Q 002029 668 EGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTL 719 (978)
Q Consensus 668 e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~ 719 (978)
....|+++||+++.+ ++.+.++ +.+||..++|+++++.|.+.+|++.+.+.
T Consensus 644 g~d~a~~~AD~vl~~~~~~~i~~a-i~~sr~t~~~i~qnl~~a~~yN~~~iplA 696 (736)
T 3rfu_A 644 GTDVAIESAGVTLLHGDLRGIAKA-RRLSESTMSNIRQNLFFAFIYNVLGVPLA 696 (736)
T ss_dssp SCSHHHHHCSEEECSCCSTTHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHhCCEEEccCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333489999999976 5568888 89999999999999999999998876544
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-53 Score=519.96 Aligned_cols=414 Identities=19% Similarity=0.239 Sum_probs=333.3
Q ss_pred EEEEEEC-----CccccC--CcCceeecCceeccCCeEEEEEEEeCccc---hhccccCCCCCCcCHHHHHHHHHHHHHH
Q 002029 27 VGSLELE-----EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDT---KVFQNSTGPPSKRSKVERRMDKIIYFLF 96 (978)
Q Consensus 27 ~G~~~~~-----~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~T---ki~~~~~~~~~k~s~l~~~~n~~~~~~~ 96 (978)
+|...+| ||+.|+ .+++.+++||.+.+ |++.+.|++||.+| |+..+...++.+++++|+.+++++.+++
T Consensus 251 ~G~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~-g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~ 329 (723)
T 3j09_A 251 EGESYVDESMISGEPVPVLKSKGDEVFGATINNT-GVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 329 (723)
T ss_dssp ECCEEEECHHHHCCSSCEEECTTCEECTTCEECS-SCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHH
T ss_pred ECCeEEecccccCCCcceeecCCCeeccceEEec-CcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 4545554 899987 88999999999996 99999999999999 5566677888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHH
Q 002029 97 GILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQ 176 (978)
Q Consensus 97 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~ 176 (978)
++.++++++++++|.++.+. +|. ..+.+++++++.+|||+|+++++++...+
T Consensus 330 ~~vl~~a~~~~~~~~~~~~~--------~~~--------------------~~~~~~i~vlvia~P~aL~la~p~a~~~~ 381 (723)
T 3j09_A 330 PTVLLVAISAFIYWYFIAHA--------PLL--------------------FAFTTLIAVLVVACPCAFGLATPTALTVG 381 (723)
T ss_dssp HHHHHHHHHHHTTSCSSTTC--------TTC--------------------CSHHHHHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCC--------cHH--------------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 98888888776554332211 111 15788899999999999999999999988
Q ss_pred HHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCC
Q 002029 177 SIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPL 256 (978)
Q Consensus 177 ~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~ 256 (978)
.. +| +++++++|+++.+|+||++|+||||||||||+|+|+|.++...+..
T Consensus 382 ~~------~~----a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~-------------------- 431 (723)
T 3j09_A 382 MG------KG----AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD-------------------- 431 (723)
T ss_dssp HH------HH----HTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC--------------------
T ss_pred HH------HH----HHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCCC--------------------
Confidence 88 45 7899999999999999999999999999999999999999765310
Q ss_pred ccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHH
Q 002029 257 EEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARE 336 (978)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~ 336 (978)
.++++...+.|.. .++||++.|+++++++
T Consensus 432 -------------------------------------~~~~l~~aa~~e~--------------~s~hP~~~Ai~~~a~~ 460 (723)
T 3j09_A 432 -------------------------------------ERELLRLAAIAER--------------RSEHPIAEAIVKKALE 460 (723)
T ss_dssp -------------------------------------HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHH
T ss_pred -------------------------------------HHHHHHHHHHHhc--------------cCCCchhHHHHHHHHh
Confidence 0134444444421 2469999999999999
Q ss_pred cCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchhhHH
Q 002029 337 LGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEE 416 (978)
Q Consensus 337 ~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~ 416 (978)
.|+.+... ..++. .+ .+.... . .+.+|+++.+.+.. ....+
T Consensus 461 ~~~~~~~~-------------------~~~~~---~~----g~g~~~------~---~~~~g~~~~~~~~~----~~~~~ 501 (723)
T 3j09_A 461 HGIELGEP-------------------EKVEV---IA----GEGVVA------D---GILVGNKRLMEDFG----VAVSN 501 (723)
T ss_dssp TTCCCCSC-------------------CCCEE---ET----TTEEEE------T---TEEEECHHHHHHTT----CCCCH
T ss_pred cCCCcCCc-------------------cceEE---ec----CCceEE------E---EEEECCHHHHHhcC----CCccH
Confidence 88754221 11110 00 001000 1 24458877664422 12345
Q ss_pred HHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHH
Q 002029 417 QTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPE 496 (978)
Q Consensus 417 ~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~ 496 (978)
...+.+++++.+|+|++++| .|++++|+++++|++|+++++
T Consensus 502 ~~~~~~~~~~~~g~~~~~va---------------------------------------~~~~~~G~i~i~D~~~~~~~~ 542 (723)
T 3j09_A 502 EVELALEKLEREAKTAVIVA---------------------------------------RNGRVEGIIAVSDTLKESAKP 542 (723)
T ss_dssp HHHHHHHHHHTTTCEEEEEE---------------------------------------ETTEEEEEEEEECCSCTTHHH
T ss_pred HHHHHHHHHHhcCCeEEEEE---------------------------------------ECCEEEEEEeecCCcchhHHH
Confidence 67788899999999999999 467899999999999999999
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhh
Q 002029 497 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 576 (978)
Q Consensus 497 ~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (978)
+|+.|+++||++||+|||+..+|..+|+++|+.
T Consensus 543 ~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~----------------------------------------------- 575 (723)
T 3j09_A 543 AVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------------------------- 575 (723)
T ss_dssp HHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------------------------
T ss_pred HHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc-----------------------------------------------
Confidence 999999999999999999999999999999982
Q ss_pred ccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhh
Q 002029 577 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 656 (978)
Q Consensus 577 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~ 656 (978)
.+++|++|+||..+|+.+++ . +.|+|+|||.||+|||+
T Consensus 576 ----------------------------------------~~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~ 613 (723)
T 3j09_A 576 ----------------------------------------LVIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALA 613 (723)
T ss_dssp ----------------------------------------EEECSCCTTCHHHHHHHHTT-T-CCEEEEECSSTTHHHHH
T ss_pred ----------------------------------------EEEccCCHHHHHHHHHHHhc-C-CeEEEEECChhhHHHHh
Confidence 18999999999999999998 4 89999999999999999
Q ss_pred hccccccccCCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHH
Q 002029 657 EADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTL 719 (978)
Q Consensus 657 ~AdvGI~i~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~ 719 (978)
+|||||+|. +....|+++||+++.+ ++.+..+ +.+||+.++++++++.|.+++|++.+.+.
T Consensus 614 ~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~-i~~~r~~~~~i~~nl~~a~~~n~~~i~~a 676 (723)
T 3j09_A 614 QADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIKQNIFWALIYNVILIPAA 676 (723)
T ss_dssp HSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999995 3333489999999965 6668888 79999999999999999999999865443
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-53 Score=511.26 Aligned_cols=414 Identities=19% Similarity=0.247 Sum_probs=332.7
Q ss_pred EEEEEEC-----CccccC--CcCceeecCceeccCCeEEEEEEEeCccc---hhccccCCCCCCcCHHHHHHHHHHHHHH
Q 002029 27 VGSLELE-----EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDT---KVFQNSTGPPSKRSKVERRMDKIIYFLF 96 (978)
Q Consensus 27 ~G~~~~~-----~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~T---ki~~~~~~~~~k~s~l~~~~n~~~~~~~ 96 (978)
+|...+| ||+.|+ .+++.+++||.+.+ |++++.|++||.+| |+.....+++.+++++|+.+++++.+++
T Consensus 173 ~G~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~-g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~ 251 (645)
T 3j08_A 173 EGESYVDESMISGEPVPVLKSKGDEVFGATINNT-GVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 251 (645)
T ss_dssp ECCEEEECHHHHCCSSCEEECTTCEECTTCEECS-SCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHH
T ss_pred ECcEEEEcccccCCCCceecCCCCEeeccEEEec-CcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 4444554 899987 78999999999996 99999999999999 5566677888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHH
Q 002029 97 GILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQ 176 (978)
Q Consensus 97 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~ 176 (978)
++.+++++++++.+.++.+. +|.. .+.+++++++.+|||+|+++++++...+
T Consensus 252 ~~vl~~a~~~~~~~~~~~~~--------~~~~--------------------~~~~~i~vlvia~P~aL~la~p~a~~~~ 303 (645)
T 3j08_A 252 PTVLLVAISAFIYWYFIAHA--------PLLF--------------------AFTTLIAVLVVACPCAFGLATPTALTVG 303 (645)
T ss_dssp HHHHHHHHHHHHCSSCCCSC--------SCCC--------------------TTTTTHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCC--------cHHH--------------------HHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 98888888776654332211 1211 4667789999999999999999999988
Q ss_pred HHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCC
Q 002029 177 SIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPL 256 (978)
Q Consensus 177 ~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~ 256 (978)
.. +| +++++++|+++.+|+||++|+||||||||||+|+|+|.++...+..
T Consensus 304 ~~------~~----a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~-------------------- 353 (645)
T 3j08_A 304 MG------KG----AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD-------------------- 353 (645)
T ss_dssp HH------HH----HTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSC--------------------
T ss_pred HH------HH----HHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCCC--------------------
Confidence 88 45 7899999999999999999999999999999999999999765310
Q ss_pred ccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHH
Q 002029 257 EEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARE 336 (978)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~ 336 (978)
.++++...+.|.. .++||++.|+++++++
T Consensus 354 -------------------------------------~~~~l~~aa~~e~--------------~s~hPla~Aiv~~a~~ 382 (645)
T 3j08_A 354 -------------------------------------ERELLRLAAIAER--------------RSEHPIAEAIVKKALE 382 (645)
T ss_dssp -------------------------------------HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHH
T ss_pred -------------------------------------HHHHHHHHHHHhh--------------cCCChhHHHHHHHHHh
Confidence 0134444444422 2469999999999999
Q ss_pred cCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchhhHH
Q 002029 337 LGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEE 416 (978)
Q Consensus 337 ~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~ 416 (978)
.|+..... ..++. .+ .+.... . .+.+|+++.+.+. +....+
T Consensus 383 ~g~~~~~~-------------------~~~~~---~~----g~g~~~------~---~v~~g~~~~~~~~----~~~~~~ 423 (645)
T 3j08_A 383 HGIELGEP-------------------EKVEV---IA----GEGVVA------D---GILVGNKRLMEDF----GVAVSN 423 (645)
T ss_dssp TTCCCCSC-------------------CCCEE---ET----TTEEEE------T---TEEEECHHHHHHT----TCCCCH
T ss_pred cCCCcCCc-------------------cceEE---ec----CCceEE------E---EEEECCHHHHHhc----CCCccH
Confidence 88754221 11110 00 001000 1 2445887766442 222345
Q ss_pred HHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHH
Q 002029 417 QTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPE 496 (978)
Q Consensus 417 ~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~ 496 (978)
...+.+++++.+|+|++++| .|++++|+++++|++|+++++
T Consensus 424 ~~~~~~~~~~~~g~~~l~va---------------------------------------~~~~~~G~i~~~D~l~~~~~~ 464 (645)
T 3j08_A 424 EVELALEKLEREAKTAVIVA---------------------------------------RNGRVEGIIAVSDTLKESAKP 464 (645)
T ss_dssp HHHHHHHHHHTTTCCCEEEE---------------------------------------ETTEEEEEEEEECCCTTTHHH
T ss_pred HHHHHHHHHHhcCCeEEEEE---------------------------------------ECCEEEEEEEecCCchhHHHH
Confidence 67788899999999999999 467899999999999999999
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhh
Q 002029 497 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 576 (978)
Q Consensus 497 ~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (978)
+|++|+++|++++|+|||+..+|..+|+++|+.
T Consensus 465 ~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~----------------------------------------------- 497 (645)
T 3j08_A 465 AVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------------------------- 497 (645)
T ss_dssp HHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC-----------------------------------------------
Confidence 999999999999999999999999999999982
Q ss_pred ccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhh
Q 002029 577 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 656 (978)
Q Consensus 577 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~ 656 (978)
.+++|++|++|..+|+.+++ . +.|+|+|||.||++|++
T Consensus 498 ----------------------------------------~~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~ 535 (645)
T 3j08_A 498 ----------------------------------------LVIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALA 535 (645)
T ss_dssp ----------------------------------------EEECSCCTTCHHHHHHHHTT-T-CCEEEEECSSSCHHHHH
T ss_pred ----------------------------------------EEEEeCCHHhHHHHHHHHhh-C-CeEEEEeCCHhHHHHHH
Confidence 18999999999999999998 4 89999999999999999
Q ss_pred hccccccccCCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHH
Q 002029 657 EADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTL 719 (978)
Q Consensus 657 ~AdvGI~i~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~ 719 (978)
+|||||+|. +....|+++||+++.+ ++.+..+ +.+||+.++|+++++.|.+++|++.+.+.
T Consensus 536 ~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~-i~~~r~~~~~i~~nl~~a~~~N~~~i~la 598 (645)
T 3j08_A 536 QADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIKQNIFWALIYNVILIPAA 598 (645)
T ss_dssp HSSEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCEEEEeC-CCcHHHHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999995 3333489999999965 6668888 79999999999999999999999865443
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.2e-26 Score=247.90 Aligned_cols=137 Identities=23% Similarity=0.312 Sum_probs=117.5
Q ss_pred ccEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHH
Q 002029 477 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSA 556 (978)
Q Consensus 477 dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 556 (978)
+-.+.|.+.+.|+++|+++++|+.|+++|++++|+|||+..++..+++++|+..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 177 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-------------------------- 177 (263)
Confidence 345889999999999999999999999999999999999999999999888721
Q ss_pred HHHHHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHc
Q 002029 557 AAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKT 636 (978)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~ 636 (978)
+|+.+.|+.|..+++.++.
T Consensus 178 -------------------------------------------------------------~f~~~~p~~k~~~~~~l~~ 196 (263)
T 2yj3_A 178 -------------------------------------------------------------YYSNLSPEDKVRIIEKLKQ 196 (263)
Confidence 4455569999999999987
Q ss_pred cCCCeEEEEcCCcCCHHHhhhccccccccCCccchhccccceeh--hchhhhHHHHHHhhhhhhhHhhH
Q 002029 637 KTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAI--AQFRFLERLLLVHGHWCYRRISS 703 (978)
Q Consensus 637 ~~~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi--~~f~~l~~lll~~gR~~~~~i~~ 703 (978)
.+..|+|||||.||++|++.||+||++... ...+...+|+++ .++..+..+ +..+|..++++++
T Consensus 197 -~~~~~~~VGD~~~D~~aa~~Agv~va~g~~-~~~~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~~ 262 (263)
T 2yj3_A 197 -NGNKVLMIGDGVNDAAALALADVSVAMGNG-VDISKNVADIILVSNDIGTLLGL-IKNRKRLSNAIPS 262 (263)
Confidence 677899999999999999999999988432 233677899999 677778887 7999999988865
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-21 Score=212.28 Aligned_cols=272 Identities=24% Similarity=0.288 Sum_probs=194.7
Q ss_pred CCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhccccc
Q 002029 191 TDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASI 270 (978)
Q Consensus 191 ~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (978)
+++++++|+++.+|.|++++.|+||||||||.+.+.+..+...+. .+
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~------~~--------------------------- 60 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG------DE--------------------------- 60 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS------CH---------------------------
T ss_pred HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC------CH---------------------------
Confidence 889999999999999999999999999999999999988865431 00
Q ss_pred CCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCceeE
Q 002029 271 KGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSIS 350 (978)
Q Consensus 271 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~ 350 (978)
.+++.. |..+ +. .+.||.+.|+.+++++.|+.....
T Consensus 61 ------------------------~~~l~~---~~~~--e~---------~s~hp~~~a~~~~~~~~g~~~~~~------ 96 (287)
T 3a1c_A 61 ------------------------RELLRL---AAIA--ER---------RSEHPIAEAIVKKALEHGIELGEP------ 96 (287)
T ss_dssp ------------------------HHHHHH---HHHH--TT---------TCCSHHHHHHHHHHHHTTCCCCCC------
T ss_pred ------------------------HHHHHH---HHHH--hh---------cCCCHHHHHHHHHHHhcCCCcccc------
Confidence 112222 2222 11 246999999999999998742110
Q ss_pred EEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchhhHHHHHHHHHHHHHccc
Q 002029 351 VHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGL 430 (978)
Q Consensus 351 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Gl 430 (978)
..+.. ++ . +++. . . .+.+|.++.+.+... ...+...+..+.+..+|.
T Consensus 97 -------------~~~~~---~~----G--~~~~--~--~---~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~g~ 143 (287)
T 3a1c_A 97 -------------EKVEV---IA----G--EGVV--A--D---GILVGNKRLMEDFGV----AVSNEVELALEKLEREAK 143 (287)
T ss_dssp -------------SCEEE---ET----T--TEEE--E--T---TEEEECHHHHHHTTC----CCCHHHHHHHHHHHHTTC
T ss_pred -------------cccee---ec----C--CCeE--E--E---EEEECCHHHHHhcCC----CccHHHHHHHHHHHhCCC
Confidence 01100 00 0 0000 0 1 123465544322111 111234556777888999
Q ss_pred eeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcCCeEEE
Q 002029 431 RTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWV 510 (978)
Q Consensus 431 r~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~m 510 (978)
+++++++ |..++|.+..+++++|++.++++.|+++|+++.+
T Consensus 144 ~~i~~~~---------------------------------------d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i 184 (287)
T 3a1c_A 144 TAVIVAR---------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGM 184 (287)
T ss_dssp EEEEEEE---------------------------------------TTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEE
T ss_pred eEEEEEE---------------------------------------CCEEEEEEEeccccchhHHHHHHHHHHCCCeEEE
Confidence 9999983 4568999999999999999999999999999999
Q ss_pred EcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEEE
Q 002029 511 LTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALII 590 (978)
Q Consensus 511 lTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi 590 (978)
+||+....+..+.+.+|+..
T Consensus 185 ~T~~~~~~~~~~l~~~gl~~------------------------------------------------------------ 204 (287)
T 3a1c_A 185 ITGDNWRSAEAISRELNLDL------------------------------------------------------------ 204 (287)
T ss_dssp ECSSCHHHHHHHHHHHTCSE------------------------------------------------------------
T ss_pred EeCCCHHHHHHHHHHhCCce------------------------------------------------------------
Confidence 99999999999999888721
Q ss_pred cCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhccccccccCCccc
Q 002029 591 DGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGM 670 (978)
Q Consensus 591 ~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~ 670 (978)
.|..+.|..|...++.+.. . ..|+||||+.||++|.+.|++||++.... .
T Consensus 205 ---------------------------~f~~i~~~~K~~~~~~l~~-~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~-~ 254 (287)
T 3a1c_A 205 ---------------------------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGS-D 254 (287)
T ss_dssp ---------------------------EECSCCTTCHHHHHHHHTT-T-CCEEEEECTTTCHHHHHHSSEEEEECCCS-C
T ss_pred ---------------------------eeeecChHHHHHHHHHHhc-C-CeEEEEECCHHHHHHHHHCCeeEEeCCCC-H
Confidence 4555668899999999887 5 89999999999999999999999884332 2
Q ss_pred hhccccceeh--hchhhhHHHHHHhhhhhhhHhh
Q 002029 671 QAVMSSDIAI--AQFRFLERLLLVHGHWCYRRIS 702 (978)
Q Consensus 671 ~a~~asD~vi--~~f~~l~~lll~~gR~~~~~i~ 702 (978)
..+..+|+++ .++..+..+ +..+|.++++|+
T Consensus 255 ~~~~~ad~v~~~~~~~~l~~~-l~~~~~~~~~i~ 287 (287)
T 3a1c_A 255 VAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIK 287 (287)
T ss_dssp CSSCCSSEEESSSCTHHHHHH-HHTTC-------
T ss_pred HHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHhhC
Confidence 2566799999 778878877 799999888764
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-19 Score=197.07 Aligned_cols=274 Identities=24% Similarity=0.287 Sum_probs=187.1
Q ss_pred ccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcccccCCcccC
Q 002029 197 ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFE 276 (978)
Q Consensus 197 ~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (978)
+|+++.+|.|++++.|+|||+||||.|+|++.++...+. .
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~------~---------------------------------- 40 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH------S---------------------------------- 40 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS------C----------------------------------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC------C----------------------------------
Confidence 478889999999999999999999999999999865432 0
Q ss_pred chhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCC
Q 002029 277 DERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDP 356 (978)
Q Consensus 277 ~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~ 356 (978)
..+++..++.+.. .+.+|...++.++++..|+.....
T Consensus 41 -----------------~~~~~~~~~~~~~--------------~s~~~~~~a~~~~~~~~g~~~~~~------------ 77 (280)
T 3skx_A 41 -----------------EDELLQIAASLEA--------------RSEHPIAAAIVEEAEKRGFGLTEV------------ 77 (280)
T ss_dssp -----------------HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCCC------------
T ss_pred -----------------HHHHHHHHHHhhc--------------cCCCHHHHHHHHHHHhcCCCCCCc------------
Confidence 0123333332211 135788999999999988643210
Q ss_pred CCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchhhHHHHHHHHHHHHHccceeEeeE
Q 002029 357 VTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILA 436 (978)
Q Consensus 357 ~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~A 436 (978)
..+ ..++ .+.+...+ ++... ..|.++.+.+...... .....+..++.+++.++
T Consensus 78 -------~~~---~~~~----g~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 130 (280)
T 3skx_A 78 -------EEF---RAIP----GKGVEGIV---NGRRY--MVVSPGYIRELGIKTD--------ESVEKLKQQGKTVVFIL 130 (280)
T ss_dssp -------EEE---EEET----TTEEEEEE---TTEEE--EEECHHHHHHTTCCCC--------TTHHHHHTTTCEEEEEE
T ss_pred -------cce---eecC----CCEEEEEE---CCEEE--EEecHHHHHHcCCCch--------HHHHHHHhCCCeEEEEE
Confidence 111 0110 11111121 22222 2366555543322111 23445677888888877
Q ss_pred EEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCCh
Q 002029 437 YRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKM 516 (978)
Q Consensus 437 ~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~ 516 (978)
.+..++|.+.+.|+++++++++++.|++.|+++.++||+..
T Consensus 131 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~ 171 (280)
T 3skx_A 131 ---------------------------------------KNGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNR 171 (280)
T ss_dssp ---------------------------------------ETTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCH
T ss_pred ---------------------------------------ECCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCH
Confidence 35578999999999999999999999999999999999999
Q ss_pred hhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhh
Q 002029 517 ETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLT 596 (978)
Q Consensus 517 ~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~ 596 (978)
..+..+.+.+|+..
T Consensus 172 ~~~~~~~~~~gl~~------------------------------------------------------------------ 185 (280)
T 3skx_A 172 FVAKWVAEELGLDD------------------------------------------------------------------ 185 (280)
T ss_dssp HHHHHHHHHHTCSE------------------------------------------------------------------
T ss_pred HHHHHHHHHcCChh------------------------------------------------------------------
Confidence 99999999888721
Q ss_pred hhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhccccccccCCccchhcccc
Q 002029 597 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSS 676 (978)
Q Consensus 597 ~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~as 676 (978)
.|..+.|.+|...++-+.+ .. .++|||||.||++|++.|++||++.+.. ..++..|
T Consensus 186 ---------------------~f~~~~~~~k~~~~k~~~~-~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~-~~~~~~a 241 (280)
T 3skx_A 186 ---------------------YFAEVLPHEKAEKVKEVQQ-KY-VTAMVGDGVNDAPALAQADVGIAIGAGT-DVAVETA 241 (280)
T ss_dssp ---------------------EECSCCGGGHHHHHHHHHT-TS-CEEEEECTTTTHHHHHHSSEEEECSCCS-SSCCCSS
T ss_pred ---------------------HhHhcCHHHHHHHHHHHHh-cC-CEEEEeCCchhHHHHHhCCceEEecCCc-HHHHhhC
Confidence 5667778899999998886 33 6799999999999999999999985433 3367889
Q ss_pred ceeh--hchhhhHHHHHHhhhhhhhHhhHhHHHHHH
Q 002029 677 DIAI--AQFRFLERLLLVHGHWCYRRISSMICYFFY 710 (978)
Q Consensus 677 D~vi--~~f~~l~~lll~~gR~~~~~i~~~i~~~~~ 710 (978)
|+++ .+...+..+ +..+|..++++++.+.|.+.
T Consensus 242 ~~~~~~~~~~~l~~~-l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 242 DIVLVRNDPRDVAAI-VELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp SEECSSCCTHHHHHH-HHHHHTCCC-----------
T ss_pred CEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 9998 567778888 78999999998888887754
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-19 Score=180.03 Aligned_cols=140 Identities=20% Similarity=0.222 Sum_probs=109.7
Q ss_pred HHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCC
Q 002029 296 KFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFS 375 (978)
Q Consensus 296 ~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~ 375 (978)
+.++..++|+..... .++|+|.|+++++...+.. .....|+++..+|||
T Consensus 17 ~vl~~a~L~s~~~~~-----------~~n~~d~Ail~~~~~~~~~--------------------~~~~~~~~~~eiPFd 65 (170)
T 3gwi_A 17 RVLHSAWLNSHYQTG-----------LKNLLDTAVLEGTDEESAR--------------------SLASRWQKIDEIPFD 65 (170)
T ss_dssp HHHHHHHHHHHHCCS-----------CCCHHHHHHHHTSCHHHHH--------------------HHHHHSEEEEEECCC
T ss_pred HHHHHHHHcCCCCCC-----------CCChHHHHHHHHHHhcChh--------------------hhhhcCeEEeeEecC
Confidence 566777777754321 2599999999987543310 013679999999999
Q ss_pred CCCceEEEEEEeCCCeEEEEEeCCchHHHHHhccc---------chhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHH
Q 002029 376 SSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYK 446 (978)
Q Consensus 376 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~ 446 (978)
|+||||||+++.++|++++|+||||+.|+++|+.. +++.++.+.+.++.|+.+|+|||++|||.++.++.
T Consensus 66 s~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~- 144 (170)
T 3gwi_A 66 FERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREG- 144 (170)
T ss_dssp TTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSS-
T ss_pred cccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCcc-
Confidence 99999999999888889999999999999999852 34567889999999999999999999999875320
Q ss_pred HHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccc
Q 002029 447 QFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDK 489 (978)
Q Consensus 447 ~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~ 489 (978)
.. ....|+||+|+|++|+-|.
T Consensus 145 -----------~~-----------~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 145 -----------DY-----------QRADESDLILEGYIAFLDH 165 (170)
T ss_dssp -----------CC-----------CGGGSCSEEEEEEEEEEC-
T ss_pred -----------cc-----------CccccCCcEEEehhccccc
Confidence 00 1235899999999999885
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.51 E-value=6.2e-15 Score=161.54 Aligned_cols=143 Identities=13% Similarity=0.099 Sum_probs=104.3
Q ss_pred eccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHH
Q 002029 486 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 565 (978)
Q Consensus 486 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (978)
..+++||+++++++.|+++|+++.|+|||...++.++|+++|+...+..+.......
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~----------------------- 194 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDF----------------------- 194 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEE-----------------------
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEE-----------------------
Confidence 358999999999999999999999999999999999999999876554332211100
Q ss_pred HHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEE
Q 002029 566 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAI 645 (978)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~ai 645 (978)
........+.++.. ..+++..|.+|...+..+++ .++.|+|+
T Consensus 195 ----------------~~~~~~~~~~~~~i---------------------~~~~k~~~~~k~~~~~~~~~-~~~~v~~v 236 (297)
T 4fe3_A 195 ----------------DENGVLKGFKGELI---------------------HVFNKHDGALKNTDYFSQLK-DNSNIILL 236 (297)
T ss_dssp ----------------CTTSBEEEECSSCC---------------------CTTCHHHHHHTCHHHHHHTT-TCCEEEEE
T ss_pred ----------------cccceeEecccccc---------------------chhhcccHHHHHHHHHHhhc-cCCEEEEE
Confidence 00011112222211 14567778889888888877 78899999
Q ss_pred cCCcCCHHHhh---hcccccccc--CC----ccchhccccceehhchhh--hHHH
Q 002029 646 GDGANDVGMLQ---EADIGVGIS--GV----EGMQAVMSSDIAIAQFRF--LERL 689 (978)
Q Consensus 646 GDG~ND~~ml~---~AdvGI~i~--g~----e~~~a~~asD~vi~~f~~--l~~l 689 (978)
|||+||+||++ .||+||+|. +. ....|++++|+||.++++ +++.
T Consensus 237 GDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~ 291 (297)
T 4fe3_A 237 GDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNS 291 (297)
T ss_dssp ESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHH
T ss_pred eCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHH
Confidence 99999999954 999999874 11 222368999999999766 4544
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.04 E-value=1.8e-10 Score=116.79 Aligned_cols=137 Identities=11% Similarity=0.083 Sum_probs=103.4
Q ss_pred EEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHH
Q 002029 479 ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAA 558 (978)
Q Consensus 479 ~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~ 558 (978)
..++...++|.+ +|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------- 87 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------- 87 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE----------------------------
T ss_pred cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH----------------------------
Confidence 345555555554 9999999999999999999999999999999732
Q ss_pred HHHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccC
Q 002029 559 AALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT 638 (978)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~ 638 (978)
+|... ..|...++.+.+..
T Consensus 88 -----------------------------------------------------------~f~~~--~~K~~~~~~~~~~~ 106 (189)
T 3mn1_A 88 -----------------------------------------------------------LFQGR--EDKLVVLDKLLAEL 106 (189)
T ss_dssp -----------------------------------------------------------EECSC--SCHHHHHHHHHHHH
T ss_pred -----------------------------------------------------------HhcCc--CChHHHHHHHHHHc
Confidence 11111 55666666555432
Q ss_pred ---CCeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc------hhhhHHHHHHhhhhhhhHhhHhHHHHH
Q 002029 639 ---SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLLVHGHWCYRRISSMICYFF 709 (978)
Q Consensus 639 ---~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~------f~~l~~lll~~gR~~~~~i~~~i~~~~ 709 (978)
.+.++++||+.||++|++.|++|+++.+.. ..++..||+++.+ .+.+.++ +..+|..++++.+.+.|.+
T Consensus 107 g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~-~~~~~~ad~v~~~~~~~G~~~~l~~~-l~~~~~~~~~~~~~~~~~~ 184 (189)
T 3mn1_A 107 QLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAA-SFVREHAHGITRAQGGEGAAREFCEL-ILSAQGNLEAAHSVYLEGH 184 (189)
T ss_dssp TCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHTSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHHTTSTTC
T ss_pred CCChhHEEEECCCHHHHHHHHHCCCeEEeCCcc-HHHHHhCCEEecCCCCCcHHHHHHHH-HHHccCcHHHHHHHHhccc
Confidence 478999999999999999999999985433 3367889999987 4556666 5678889999998888876
Q ss_pred HHH
Q 002029 710 YKN 712 (978)
Q Consensus 710 ~~n 712 (978)
..|
T Consensus 185 ~~~ 187 (189)
T 3mn1_A 185 HHH 187 (189)
T ss_dssp ---
T ss_pred ccc
Confidence 655
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.82 E-value=1.5e-09 Score=117.25 Aligned_cols=75 Identities=28% Similarity=0.439 Sum_probs=53.3
Q ss_pred eCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhchh------hhHHH
Q 002029 621 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR------FLERL 689 (978)
Q Consensus 621 r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~------~l~~l 689 (978)
...|. .|+..++.+.+..| ..|+||||+.||.+|++.|++||+|.+.. ..++.+||++..+.+ .|.++
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~-~~~k~~A~~v~~~~~e~Gv~~~i~~~ 268 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQ-EPVKKAADYITLTNDEDGVAEAIERI 268 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHCSEECCCGGGTHHHHHHHHH
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCc-HHHHHhCCEEcCCCCCcHHHHHHHHH
Confidence 45555 79988888776544 57999999999999999999999995543 347889999987633 25555
Q ss_pred HHHhhhh
Q 002029 690 LLVHGHW 696 (978)
Q Consensus 690 ll~~gR~ 696 (978)
+..+|+.
T Consensus 269 ~~~~~~~ 275 (279)
T 4dw8_A 269 FNVEGHH 275 (279)
T ss_dssp C------
T ss_pred Hhccccc
Confidence 5666654
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=1.1e-08 Score=102.66 Aligned_cols=130 Identities=11% Similarity=0.057 Sum_probs=94.0
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHH
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQL 569 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (978)
+.+++.++|+.|+++|++++++||+....+..+++.+|+..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------------- 76 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------- 76 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------------------
Confidence 34456799999999999999999999999999999988731
Q ss_pred HhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCC---CeEEEEc
Q 002029 570 IRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAIG 646 (978)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~---~~v~aiG 646 (978)
.|.. ...|...++.+.+..+ +.|++||
T Consensus 77 ------------------------------------------------~~~~--~k~k~~~~~~~~~~~~~~~~~~~~vG 106 (180)
T 1k1e_A 77 ------------------------------------------------FFLG--KLEKETACFDLMKQAGVTAEQTAYIG 106 (180)
T ss_dssp ------------------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ------------------------------------------------eecC--CCCcHHHHHHHHHHcCCCHHHEEEEC
Confidence 1111 1345555554443233 6899999
Q ss_pred CCcCCHHHhhhccccccccCCccchhccccceehhchh------hhHHHHHHhhhhhhhHhhHhHHHHHH
Q 002029 647 DGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR------FLERLLLVHGHWCYRRISSMICYFFY 710 (978)
Q Consensus 647 DG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~------~l~~lll~~gR~~~~~i~~~i~~~~~ 710 (978)
|+.||++|++.|++++++.+.. ..++..||+++.+.. .+.+. +...|..++++...+.|.+.
T Consensus 107 D~~~Di~~~~~ag~~~~~~~~~-~~~~~~ad~v~~~~~~~g~~~~~~~~-~l~~~~~~~~~~~~~~~~~~ 174 (180)
T 1k1e_A 107 DDSVDLPAFAACGTSFAVADAP-IYVKNAVDHVLSTHGGKGAFREMSDM-ILQAQGKSSVFDTAQGFLKS 174 (180)
T ss_dssp CSGGGHHHHHHSSEEEECTTSC-HHHHTTSSEECSSCTTTTHHHHHHHH-HHHHTTCTHHHHCHHHHHHH
T ss_pred CCHHHHHHHHHcCCeEEeCCcc-HHHHhhCCEEecCCCCCcHHHHHHHH-HHHhcCchhhhhhccchhhh
Confidence 9999999999999999885433 236778999998742 23333 34456668887777777654
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.76 E-value=4.8e-09 Score=116.67 Aligned_cols=150 Identities=20% Similarity=0.157 Sum_probs=95.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.+++.++++.|+++|+++.++||+....+..++..+|+..--...+.+...
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~--------------------------- 230 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSG--------------------------- 230 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCC---------------------------
Confidence 68999999999999999999999999999999999999984311111111100
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEE-eCCchhHHHHHHHHHcc---CCCeEEE
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICC-RSSPKQKALVTRLVKTK---TSSTTLA 644 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~-r~sP~qK~~iV~~lk~~---~~~~v~a 644 (978)
.++|. +.. -..++.|...++.+.+. ....|+|
T Consensus 231 --------------------~~tg~------------------------~~~~~~~~kpk~~~~~~~~~~lgi~~~~~v~ 266 (335)
T 3n28_A 231 --------------------KLTGQ------------------------VLGEVVSAQTKADILLTLAQQYDVEIHNTVA 266 (335)
T ss_dssp --------------------EEEEE------------------------EESCCCCHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------eeeee------------------------ecccccChhhhHHHHHHHHHHcCCChhhEEE
Confidence 01110 000 01234555555544433 3478999
Q ss_pred EcCCcCCHHHhhhccccccccCCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHH
Q 002029 645 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKN 712 (978)
Q Consensus 645 iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n 712 (978)
||||.||++|++.|++|+++.+.+. .+..||+++.. +..+..+ +......-+|++..+.+.+.+|
T Consensus 267 vGDs~nDi~~a~~aG~~va~~~~~~--~~~~a~~v~~~~~l~~v~~~-L~~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 267 VGDGANDLVMMAAAGLGVAYHAKPK--VEAKAQTAVRFAGLGGVVCI-LSAALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp EECSGGGHHHHHHSSEEEEESCCHH--HHTTSSEEESSSCTHHHHHH-HHHHHHHTTCCCCC--------
T ss_pred EeCCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEEecCCHHHHHHH-HHhHHHHhhhhccccccccccc
Confidence 9999999999999999999954444 67889998854 3334444 3444445567777777776654
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.76 E-value=4.1e-09 Score=107.13 Aligned_cols=97 Identities=18% Similarity=0.132 Sum_probs=75.7
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhh
Q 002029 496 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 575 (978)
Q Consensus 496 ~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (978)
.+|+.|+++|+++.++||+....+..+++++|+..
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~--------------------------------------------- 93 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL--------------------------------------------- 93 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE---------------------------------------------
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE---------------------------------------------
Confidence 34999999999999999999999999999999731
Q ss_pred hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHcc---CCCeEEEEcCCcCCH
Q 002029 576 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAIGDGANDV 652 (978)
Q Consensus 576 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~~~~v~aiGDG~ND~ 652 (978)
+|... +.|...++.+.+. ....|++|||+.||+
T Consensus 94 ------------------------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi 129 (195)
T 3n07_A 94 ------------------------------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDW 129 (195)
T ss_dssp ------------------------------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGGH
T ss_pred ------------------------------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHH
Confidence 12111 3455555554443 336899999999999
Q ss_pred HHhhhccccccccCCccchhccccceehhc
Q 002029 653 GMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 653 ~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
+|++.|++++++.+.. ..++..||+++.+
T Consensus 130 ~~~~~ag~~va~~na~-~~~~~~ad~v~~~ 158 (195)
T 3n07_A 130 PVMEKVALRVCVADGH-PLLAQRANYVTHI 158 (195)
T ss_dssp HHHTTSSEEEECTTSC-HHHHHHCSEECSS
T ss_pred HHHHHCCCEEEECChH-HHHHHhCCEEEcC
Confidence 9999999999985443 3377899999976
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.73 E-value=2e-08 Score=103.37 Aligned_cols=108 Identities=14% Similarity=0.131 Sum_probs=83.6
Q ss_pred EEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHH
Q 002029 480 LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAA 559 (978)
Q Consensus 480 llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~ 559 (978)
.+....+.|.+ +|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 34455555555 9999999999999999999999999999999831
Q ss_pred HHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHcc--
Q 002029 560 ALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK-- 637 (978)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~-- 637 (978)
+|... +.|..+++.+.+.
T Consensus 118 ----------------------------------------------------------~f~~~--k~K~~~l~~~~~~lg 137 (211)
T 3ij5_A 118 ----------------------------------------------------------LYQGQ--SDKLVAYHELLATLQ 137 (211)
T ss_dssp ----------------------------------------------------------EECSC--SSHHHHHHHHHHHHT
T ss_pred ----------------------------------------------------------hhccc--CChHHHHHHHHHHcC
Confidence 22222 5566666665543
Q ss_pred -CCCeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhch
Q 002029 638 -TSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 683 (978)
Q Consensus 638 -~~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f 683 (978)
....|++|||+.||++|++.|++++++.+... .++..||+++.+.
T Consensus 138 ~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~-~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 138 CQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHP-LLLPKAHYVTRIK 183 (211)
T ss_dssp CCGGGEEEEECSGGGHHHHTTSSEEEECTTSCT-TTGGGSSEECSSC
T ss_pred cCcceEEEEcCCHHHHHHHHHCCCEEEeCCccH-HHHhhCCEEEeCC
Confidence 24789999999999999999999999855432 3778899999863
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.72 E-value=8.7e-09 Score=111.22 Aligned_cols=207 Identities=12% Similarity=0.108 Sum_probs=97.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecC------C--CcccccchhhhHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSE------T--PESKTLEKSEDKSAAAAA 560 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~------~--~~~~~~~~~~~~~~~~~~ 560 (978)
.+-+.+.++|+++++.|+++.+.||+....+..+...+|+..+....+..++. . .....++.+...+.++..
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~~~ 101 (279)
T 3mpo_A 22 ELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYEDYIDLEAWA 101 (279)
T ss_dssp --CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHHHHHHHHHHH
Confidence 46778899999999999999999999999999999999864322222222222 1 111122222222222221
Q ss_pred HHHHH-------------------HHHHHhhhhh-------hccccCCCCCeEEEEcCchh-hhhchhhHHHHHHH-HHh
Q 002029 561 LKASV-------------------LHQLIRGKEL-------LDSSNESLGPLALIIDGKSL-TYALEDDVKDLFLE-LAI 612 (978)
Q Consensus 561 ~~~~~-------------------~~~~~~~~~~-------~~~~~~~~~~~~lvi~G~~l-~~~~~~~~~~~f~~-l~~ 612 (978)
..... .......... +...........+.+.++.- .....+.+.+.+.. +..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~ 181 (279)
T 3mpo_A 102 RKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKDRFSV 181 (279)
T ss_dssp HHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHHHHEEE
T ss_pred HHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhCCCEEE
Confidence 11100 0000000000 00000011111222222210 00001111111211 110
Q ss_pred ccCeeEEEeCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhchh---
Q 002029 613 GCASVICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR--- 684 (978)
Q Consensus 613 ~~~~vi~~r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~--- 684 (978)
......+....|. .|+..++.+.+..| ..|++|||+.||.+|++.|++||+|.+... ..+.+||++..+.+
T Consensus 182 ~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~-~~k~~A~~v~~~~~e~G 260 (279)
T 3mpo_A 182 VQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAID-EVKEAAQAVTLTNAENG 260 (279)
T ss_dssp ECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CC-HHHHHCSCBC------C
T ss_pred EEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCH-HHHHhcceeccCCCccH
Confidence 1111123344453 59998888776554 679999999999999999999999965443 37889999987632
Q ss_pred ---hhHHHHHHhhhh
Q 002029 685 ---FLERLLLVHGHW 696 (978)
Q Consensus 685 ---~l~~lll~~gR~ 696 (978)
.|.++++-+|+.
T Consensus 261 v~~~i~~~~~~~~~~ 275 (279)
T 3mpo_A 261 VAAAIRKYALNEGHH 275 (279)
T ss_dssp HHHHHC---------
T ss_pred HHHHHHHHhcccCcc
Confidence 255555556653
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.70 E-value=2.5e-08 Score=98.55 Aligned_cols=107 Identities=11% Similarity=0.045 Sum_probs=81.3
Q ss_pred ccEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHH--HcCccccCceEEEEecCCCcccccchhhhH
Q 002029 477 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGF--ACSLLRQGMRQVIISSETPESKTLEKSEDK 554 (978)
Q Consensus 477 dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~--~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~ 554 (978)
+-..++.+.++|.. +|+.|+++|+++.++||+ ..+..+++ .+|+.
T Consensus 30 ~g~~~~~f~~~D~~------~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------- 76 (168)
T 3ewi_A 30 DQKEIISYDVKDAI------GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------- 76 (168)
T ss_dssp SCCCEEEEEHHHHH------HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------------------------
T ss_pred CCCEEEEEecCcHH------HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------------------------
Confidence 44567777778773 899999999999999999 67777887 44431
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHH
Q 002029 555 SAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLV 634 (978)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~l 634 (978)
++ ..+++|...++.+
T Consensus 77 ---------------------------------------------------------------~~--~g~~~K~~~l~~~ 91 (168)
T 3ewi_A 77 ---------------------------------------------------------------TE--VSVSDKLATVDEW 91 (168)
T ss_dssp ---------------------------------------------------------------EE--CSCSCHHHHHHHH
T ss_pred ---------------------------------------------------------------EE--ECCCChHHHHHHH
Confidence 01 1134577777666
Q ss_pred HccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 635 KTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 635 k~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
.+..+ ..++++||+.||++|++.|+++++|.+.. ..++..||+++.+
T Consensus 92 ~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~-~~~k~~Ad~v~~~ 141 (168)
T 3ewi_A 92 RKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADAC-SGAQKAVGYICKC 141 (168)
T ss_dssp HHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTCC-HHHHTTCSEECSS
T ss_pred HHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCChh-HHHHHhCCEEeCC
Confidence 55433 68999999999999999999999995443 3378999999975
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.68 E-value=3.2e-08 Score=98.88 Aligned_cols=115 Identities=13% Similarity=0.149 Sum_probs=85.6
Q ss_pred EEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHH
Q 002029 480 LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAA 559 (978)
Q Consensus 480 llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~ 559 (978)
.+....+.|.+ +|+.|+++|+++.++||+....+..+++.+|+-
T Consensus 36 ~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~------------------------------ 79 (176)
T 3mmz_A 36 EFVSVHRGDGL------GIAALRKSGLTMLILSTEQNPVVAARARKLKIP------------------------------ 79 (176)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC------------------------------
T ss_pred HhHhcccccHH------HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe------------------------------
Confidence 34445555544 899999999999999999999999999998872
Q ss_pred HHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccC-
Q 002029 560 ALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT- 638 (978)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~- 638 (978)
+++.. ..|...++.+.+..
T Consensus 80 ----------------------------------------------------------~~~~~--~~k~~~l~~~~~~~~ 99 (176)
T 3mmz_A 80 ----------------------------------------------------------VLHGI--DRKDLALKQWCEEQG 99 (176)
T ss_dssp ----------------------------------------------------------EEESC--SCHHHHHHHHHHHHT
T ss_pred ----------------------------------------------------------eEeCC--CChHHHHHHHHHHcC
Confidence 11111 44666665554433
Q ss_pred --CCeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc------hhhhHHHHH
Q 002029 639 --SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLL 691 (978)
Q Consensus 639 --~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~------f~~l~~lll 691 (978)
...++++||+.||++|++.|++|+++.+.. ..++..||+++.+ .+.+.++|+
T Consensus 100 ~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~-~~~~~~ad~v~~~~~~~g~~~~l~~~l~ 159 (176)
T 3mmz_A 100 IAPERVLYVGNDVNDLPCFALVGWPVAVASAH-DVVRGAARAVTTVPGGDGAIREIASWIL 159 (176)
T ss_dssp CCGGGEEEEECSGGGHHHHHHSSEEEECTTCC-HHHHHHSSEECSSCTTTTHHHHHHHHHH
T ss_pred CCHHHEEEEcCCHHHHHHHHHCCCeEECCChh-HHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 367999999999999999999999985433 2367889999987 555666643
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.66 E-value=1.5e-08 Score=110.09 Aligned_cols=75 Identities=16% Similarity=0.212 Sum_probs=54.9
Q ss_pred hhHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhchh------hhHHHHHHhhh
Q 002029 625 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR------FLERLLLVHGH 695 (978)
Q Consensus 625 ~qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~------~l~~lll~~gR 695 (978)
..|+..++.+.+..| ..|++|||+.||++|++.|++||+|.+.. ..++..||++..+.. .|.+++...++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~-~~~k~~Ad~v~~s~~edGv~~~i~~~~~~~~~ 279 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAV-PEIKRKADWVTRSNDEQGVAYMMKEYFRMQQR 279 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHSSEECCCTTTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCc-HHHHHhcCEECCCCCccHHHHHHHHHHHhcCc
Confidence 469998888776544 67999999999999999999999996554 337889999987633 25555555566
Q ss_pred hhhhH
Q 002029 696 WCYRR 700 (978)
Q Consensus 696 ~~~~~ 700 (978)
+-|.+
T Consensus 280 ~~~~~ 284 (290)
T 3dnp_A 280 KGFLD 284 (290)
T ss_dssp C----
T ss_pred ccHHh
Confidence 55543
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.65 E-value=5.8e-08 Score=105.05 Aligned_cols=193 Identities=15% Similarity=0.154 Sum_probs=105.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc----cccCceEEEEecCCCcccccchhhhHHHHHHHHHH-
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVIISSETPESKTLEKSEDKSAAAAALKA- 563 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl----~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~- 563 (978)
.+-+.+.++|++|+++|++++++||+....+..+...+++ +..++..+..+++......++.+...+.++.....
T Consensus 39 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 118 (283)
T 3dao_A 39 LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRTPKEILKTYPMDEDIWKGMCRMVRDEL 118 (283)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEECSSCEEEECCCCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEECCEEEEEecCCHHHHHHHHHHHHHhc
Confidence 4678899999999999999999999999999988887764 34444444332222222233333322222222211
Q ss_pred -H-------------------HHHHHHhhh-------hhhccccCCCCCeEEEE-cCchhhhhchhhHHHHHHH-HHhcc
Q 002029 564 -S-------------------VLHQLIRGK-------ELLDSSNESLGPLALII-DGKSLTYALEDDVKDLFLE-LAIGC 614 (978)
Q Consensus 564 -~-------------------~~~~~~~~~-------~~~~~~~~~~~~~~lvi-~G~~l~~~~~~~~~~~f~~-l~~~~ 614 (978)
. ....+.... ..+............+. +....... .+.+.+.+.. +....
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~i~~~~~~~~~~-~~~l~~~~~~~~~~~~ 197 (283)
T 3dao_A 119 PACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFTVFHPDKCEELC-TPVFIPAWNKKAHLAA 197 (283)
T ss_dssp TTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEEEECSSCHHHHH-TTTHHHHHTTTEEEEE
T ss_pred CCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEEEEcChHHHHHH-HHHHHHHhcCCEEEEE
Confidence 0 000010000 00000000111122222 22222211 1223333321 00000
Q ss_pred CeeEEEeCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhch
Q 002029 615 ASVICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 683 (978)
Q Consensus 615 ~~vi~~r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f 683 (978)
....+..+.|. .|+..++.+.+..| ..|++|||+.||.+|++.|++||+|.+... .++..||++..+.
T Consensus 198 s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~-~~k~~A~~v~~s~ 270 (283)
T 3dao_A 198 AGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQ-EVIAAAKHTCAPY 270 (283)
T ss_dssp ETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCH-HHHHHSSEEECCG
T ss_pred ecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCH-HHHHhcCeECCCC
Confidence 00112334443 69999988877655 679999999999999999999999965543 3788999998763
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.60 E-value=2.8e-08 Score=103.74 Aligned_cols=177 Identities=14% Similarity=0.067 Sum_probs=97.0
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc----ccCceEEEE-ecCCC-cccccchhhhHHHHHHH
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVII-SSETP-ESKTLEKSEDKSAAAAA 560 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~----~~~~~~i~i-~~~~~-~~~~~~~~~~~~~~~~~ 560 (978)
..++.+++.++|++|+++|++++++||+....+..+++++|+- ..++..+.. +++.. ....+ .....+ +.
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l---~~~~~i-~~ 95 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNE---GTNKFL-EE 95 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSH---HHHHHH-HH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccH---HHHHHH-HH
Confidence 3457888999999999999999999999999999999998863 223332221 11111 11111 111111 11
Q ss_pred HHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeE-----EEeCCc--hhHHHHHHH
Q 002029 561 LKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVI-----CCRSSP--KQKALVTRL 633 (978)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi-----~~r~sP--~qK~~iV~~ 633 (978)
..+ ........... ........ + +. ..+++..+.+... ....+ +.++.| ..|+..++.
T Consensus 96 ~~~-----~~~~~~~~~~~-~~~~~~~~-~----~~-~~~~~~~~~~~~~---~~~~~~~~~~~~ei~~~~~~K~~~l~~ 160 (227)
T 1l6r_A 96 MSK-----RTSMRSILTNR-WREASTGF-D----ID-PEDVDYVRKEAES---RGFVIFYSGYSWHLMNRGEDKAFAVNK 160 (227)
T ss_dssp HTT-----TSSCBCCGGGG-GCSSSEEE-B----CC-GGGHHHHHHHHHT---TTEEEEEETTEEEEEETTCSHHHHHHH
T ss_pred HHH-----HhcCCcccccc-ceecccce-E----Ee-cCCHHHHHHHHHh---cCEEEEecCcEEEEecCCCCHHHHHHH
Confidence 100 00000000000 00000000 0 00 0111111111111 11111 223445 589999988
Q ss_pred HHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhch
Q 002029 634 VKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 683 (978)
Q Consensus 634 lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f 683 (978)
+.+..+ ..|+++|||.||.+|++.|++||++.+.. ..++..||+++.+.
T Consensus 161 l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~~-~~~k~~a~~v~~~~ 212 (227)
T 1l6r_A 161 LKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANAT-DNIKAVSDFVSDYS 212 (227)
T ss_dssp HHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSC-HHHHHHCSEECSCC
T ss_pred HHHHhCcCHHHEEEECCcHHhHHHHHHcCceEEecCch-HHHHHhCCEEecCC
Confidence 876543 57999999999999999999999995443 33677899998763
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.60 E-value=3.3e-08 Score=100.24 Aligned_cols=114 Identities=16% Similarity=0.147 Sum_probs=82.8
Q ss_pred HHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhc
Q 002029 498 IDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLD 577 (978)
Q Consensus 498 I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (978)
|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~----------------------------------------------- 87 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH----------------------------------------------- 87 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-----------------------------------------------
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-----------------------------------------------
Confidence 999999999999999999999999999988732
Q ss_pred cccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeC--CchhHHHHHHHHHccCCCeEEEEcCCcCCHHHh
Q 002029 578 SSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS--SPKQKALVTRLVKTKTSSTTLAIGDGANDVGML 655 (978)
Q Consensus 578 ~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~--sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml 655 (978)
+|... .|+-...+++.+.- ....+++|||+.||++|+
T Consensus 88 ----------------------------------------~~~~~kpk~~~~~~~~~~~~~-~~~~~~~vGD~~~Di~~~ 126 (191)
T 3n1u_A 88 ----------------------------------------YYKGQVDKRSAYQHLKKTLGL-NDDEFAYIGDDLPDLPLI 126 (191)
T ss_dssp ----------------------------------------EECSCSSCHHHHHHHHHHHTC-CGGGEEEEECSGGGHHHH
T ss_pred ----------------------------------------ceeCCCChHHHHHHHHHHhCC-CHHHEEEECCCHHHHHHH
Confidence 11111 22223334444432 456899999999999999
Q ss_pred hhccccccccCCccchhccccceehhc------hhhhHHHHHHhhhhhhhHh
Q 002029 656 QEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLLVHGHWCYRRI 701 (978)
Q Consensus 656 ~~AdvGI~i~g~e~~~a~~asD~vi~~------f~~l~~lll~~gR~~~~~i 701 (978)
+.|++++++.+.. ..++..||+++.+ .+.+... +...|..+.++
T Consensus 127 ~~ag~~~~~~~~~-~~~~~~ad~v~~~~~~~g~~~~l~~~-ll~~~~~~~~~ 176 (191)
T 3n1u_A 127 QQVGLGVAVSNAV-PQVLEFADWRTERTGGRGAVRELCDL-ILNAQNKAELA 176 (191)
T ss_dssp HHSSEEEECTTCC-HHHHHHSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHH
T ss_pred HHCCCEEEeCCcc-HHHHHhCCEEecCCCCCcHHHHHHHH-HHHhcCcHHHH
Confidence 9999999885443 3377889999987 3345555 45556666554
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=1.6e-07 Score=92.42 Aligned_cols=109 Identities=19% Similarity=0.115 Sum_probs=80.2
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhh
Q 002029 497 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 576 (978)
Q Consensus 497 ~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (978)
+++.|+++|+++.++||+....+..+++.+|+..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------------------------- 72 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------------------------- 72 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999998732
Q ss_pred ccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHcc---CCCeEEEEcCCcCCHH
Q 002029 577 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAIGDGANDVG 653 (978)
Q Consensus 577 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~~~~v~aiGDG~ND~~ 653 (978)
.+... +.|...++.+.+. ..+.+++|||+.||++
T Consensus 73 -----------------------------------------~~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~ 109 (164)
T 3e8m_A 73 -----------------------------------------LFQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAK 109 (164)
T ss_dssp -----------------------------------------EECSC--SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHH
T ss_pred -----------------------------------------eeccc--CChHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 11111 3344444443332 3468999999999999
Q ss_pred HhhhccccccccCCccchhccccceehhc------hhhhHHHHHHhhhh
Q 002029 654 MLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLLVHGHW 696 (978)
Q Consensus 654 ml~~AdvGI~i~g~e~~~a~~asD~vi~~------f~~l~~lll~~gR~ 696 (978)
|.+.|++++.+.+.. ..++..||+++.+ +..+.+.++ +|++
T Consensus 110 ~~~~ag~~~~~~~~~-~~~~~~ad~v~~~~~~~g~~~e~~~~ll-~~~~ 156 (164)
T 3e8m_A 110 LLKRVGIAGVPASAP-FYIRRLSTIFLEKRGGEGVFREFVEKVL-GINL 156 (164)
T ss_dssp HHTTSSEEECCTTSC-HHHHTTCSSCCCCCTTTTHHHHHHHHHT-TCCH
T ss_pred HHHHCCCeEEcCChH-HHHHHhCcEEeccCCCCcHHHHHHHHHH-ccCc
Confidence 999999999884432 3377889999987 444555545 5553
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.50 E-value=9.9e-08 Score=104.38 Aligned_cols=59 Identities=17% Similarity=0.250 Sum_probs=48.5
Q ss_pred hhHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhchh
Q 002029 625 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 684 (978)
Q Consensus 625 ~qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~ 684 (978)
..|+..++.+.++.| ..|++|||+.||++|++.|++||+|.+... ..+.+||++..+..
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~-~~k~~Ad~v~~~~~ 288 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPK-NVKAAANYQAKSND 288 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCH-HHHHHCSEECCCGG
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCH-HHHHhccEEcCCCC
Confidence 479988888876554 679999999999999999999999955443 37889999987633
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=4.3e-07 Score=87.67 Aligned_cols=106 Identities=18% Similarity=0.380 Sum_probs=77.5
Q ss_pred cCCccHHHHHHHHHHc-CCEEEeecCceeEEEecCCCCCccceeEee-EeEeecCCCCCceEEEEEEeCCCeEEEEEeCC
Q 002029 322 AESPDEAAFVIAAREL-GFEFYERTQTSISVHELDPVTGTKVERSYS-LLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGA 399 (978)
Q Consensus 322 ~~sp~E~Alv~~a~~~-g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~-il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa 399 (978)
++||..+|++++|++. |+.+.. .. + .....+|++..++.+|.+ +|+ -+.+|+
T Consensus 49 SeHPla~AIv~~A~~~~~l~~~~--------------------~~-~~~~~~~~F~a~~G~~Gv~v---~G~--~v~vGn 102 (156)
T 1svj_A 49 DETPEGRSIVILAKQRFNLRERD--------------------VQ-SLHATFVPFTAQSRMSGINI---DNR--MIRKGS 102 (156)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCC--------------------HH-HHTCEEEEEETTTTEEEEEE---TTE--EEEEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCccc--------------------cc-ccccceeeccccCCCCeEEE---CCE--EEEEeC
Confidence 4799999999999986 653211 00 0 012357888877777744 453 467899
Q ss_pred chHHHHHhcccchhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccE
Q 002029 400 DSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLI 479 (978)
Q Consensus 400 ~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~ 479 (978)
++.|...+...+....+.+.+.++.++.+|.+++++| .|..
T Consensus 103 ~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA---------------------------------------~d~~ 143 (156)
T 1svj_A 103 VDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVV---------------------------------------EGSR 143 (156)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEE---------------------------------------ETTE
T ss_pred cHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEE---------------------------------------ECCE
Confidence 9888777765433334457788899999999999999 4667
Q ss_pred EEEEEeeccccCC
Q 002029 480 LLGATAVEDKLQN 492 (978)
Q Consensus 480 llG~i~ieD~lr~ 492 (978)
++|++++.|++|+
T Consensus 144 l~GvIalaD~iK~ 156 (156)
T 1svj_A 144 VLGVIALKDIVKG 156 (156)
T ss_dssp EEEEEEEEECCCC
T ss_pred EEEEEEEecCCCC
Confidence 9999999999996
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.48 E-value=4.7e-07 Score=96.34 Aligned_cols=57 Identities=26% Similarity=0.335 Sum_probs=46.6
Q ss_pred hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhch
Q 002029 626 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 683 (978)
Q Consensus 626 qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f 683 (978)
.|+..++.+.+..| ..|+++|||.||.+|++.|++||+|.+ .....+..||++..+.
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~n-a~~~~k~~A~~v~~~~ 242 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGN-AHEEVKRVADFVTKPV 242 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETT-CCHHHHHTCSEEECCG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCC-CcHHHHHhCCEEeCCC
Confidence 69988888776533 679999999999999999999999954 3344788999998653
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.48 E-value=1.6e-07 Score=95.17 Aligned_cols=117 Identities=18% Similarity=0.244 Sum_probs=88.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.+++.++++.|++.|++++++|++....+..+ +.+|+-.- ...+....
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~~---------------------------- 128 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFED---------------------------- 128 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEET----------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEeeC----------------------------
Confidence 7899999999999999999999999998888777 77776322 11111100
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCC
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 648 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG 648 (978)
.. .-.....|..|...++.+ ....+++|||+
T Consensus 129 ------------------------~~----------------------~~~~~~~~~~k~~~l~~l---~~~~~i~iGD~ 159 (201)
T 4ap9_A 129 ------------------------GK----------------------FQGIRLRFRDKGEFLKRF---RDGFILAMGDG 159 (201)
T ss_dssp ------------------------TE----------------------EEEEECCSSCHHHHHGGG---TTSCEEEEECT
T ss_pred ------------------------Cc----------------------eECCcCCccCHHHHHHhc---CcCcEEEEeCC
Confidence 00 011455677898888887 35678999999
Q ss_pred cCCHHHhhhccccccccCCccchhccccceehhchhhhHHH
Q 002029 649 ANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 649 ~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~~l~~l 689 (978)
.||++|++.|++||++.+... .||+++.++..+..+
T Consensus 160 ~~Di~~~~~ag~~v~~~~~~~-----~ad~v~~~~~el~~~ 195 (201)
T 4ap9_A 160 YADAKMFERADMGIAVGREIP-----GADLLVKDLKELVDF 195 (201)
T ss_dssp TCCHHHHHHCSEEEEESSCCT-----TCSEEESSHHHHHHH
T ss_pred HHHHHHHHhCCceEEECCCCc-----cccEEEccHHHHHHH
Confidence 999999999999999855432 789999988776665
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.40 E-value=1.4e-07 Score=102.07 Aligned_cols=62 Identities=19% Similarity=0.265 Sum_probs=48.6
Q ss_pred EeCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 620 CRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 620 ~r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
.++.|. .|+..++.+.+..| ..++++||+.||.+|++.|++||++.+... ..+..||+++.+
T Consensus 190 lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~-~~~~~a~~v~~~ 256 (282)
T 1rkq_A 190 LEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIP-SVKEVANFVTKS 256 (282)
T ss_dssp EEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHCSEECCC
T ss_pred EEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcH-HHHhhCCEEecC
Confidence 345555 79998888876433 579999999999999999999999955432 366789999876
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.39 E-value=1.9e-07 Score=100.16 Aligned_cols=64 Identities=17% Similarity=0.240 Sum_probs=49.7
Q ss_pred hhHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhchhh--hHHH
Q 002029 625 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERL 689 (978)
Q Consensus 625 ~qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~~--l~~l 689 (978)
..|+..++.+.+..| +.+++|||+.||.+|++.|++||+|.+.. ...+..||++..+... +.+.
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~-~~~k~~A~~v~~~~~edGv~~~ 267 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSH-QQLKDIATSICEDIFDNGIYKE 267 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSC-HHHHHHCSEEECCGGGTHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCcc-HHHHHhhhheeCCCchhHHHHH
Confidence 369888887766533 67999999999999999999999995544 3478899999876433 4444
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.39 E-value=8e-07 Score=93.43 Aligned_cols=178 Identities=11% Similarity=0.069 Sum_probs=93.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc-CccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC-SLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~-gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
.+-+.+.++|++|+++| +++++||+....+..+...+ .++..++..+..+++.. .. ........+.......+..
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l~~~I~~nGa~i~~~~~~~--~~-~~~~~~~~l~~~~~~~i~~ 98 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLDINMICYHGACSKINGQIV--YN-NGSDRFLGVFDRIYEDTRS 98 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSSCEEEEGGGTEEEETTEEE--EC-TTGGGGHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccchheEEECCEEEeeCCeee--ec-ccccccchhhHHHHHHHHH
Confidence 46678999999999999 99999999999988887654 34444554443321110 00 0000011111111111111
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchh---hHHHHHHHHHhccC---eeEEEeCCch--hHHHHHHHHHccCC
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALED---DVKDLFLELAIGCA---SVICCRSSPK--QKALVTRLVKTKTS 639 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~---~~~~~f~~l~~~~~---~vi~~r~sP~--qK~~iV~~lk~~~~ 639 (978)
.+.... .+... .. .......-..+....++ .+.+.+... .... ..-+..+.|. .|+..++.+.+..|
T Consensus 99 ~~~~~~-~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g 173 (239)
T 1u02_A 99 WVSDFP-GLRIY-RK--NLAVLYHLGLMGADMKPKLRSRIEEIARI-FGVETYYGKMIIELRVPGVNKGSAIRSVRGERP 173 (239)
T ss_dssp HHHHST-TCEEE-EE--TTEEEEECTTSCSTTHHHHHHHHHHHHHH-HTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC
T ss_pred HHhhCC-CcEEE-ec--CCEEEEEcCCCChhHHHHHHHHHHHHhcc-CCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC
Confidence 111100 00000 00 00111110101000011 111112111 1111 0112344554 79999999988677
Q ss_pred CeEEEEcCCcCCHHHhhhc--cccccccCCccchhccccceehhc
Q 002029 640 STTLAIGDGANDVGMLQEA--DIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 640 ~~v~aiGDG~ND~~ml~~A--dvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
|+++|||.||.+||+.| ++||+|.+. +..||+++.+
T Consensus 174 --via~GD~~ND~~Ml~~a~~g~~vam~Na-----~~~A~~v~~~ 211 (239)
T 1u02_A 174 --AIIAGDDATDEAAFEANDDALTIKVGEG-----ETHAKFHVAD 211 (239)
T ss_dssp --EEEEESSHHHHHHHHTTTTSEEEEESSS-----CCCCSEEESS
T ss_pred --eEEEeCCCccHHHHHHhhCCcEEEECCC-----CCcceEEeCC
Confidence 99999999999999999 999999653 5678988766
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.38 E-value=2.1e-07 Score=100.65 Aligned_cols=57 Identities=23% Similarity=0.193 Sum_probs=45.8
Q ss_pred eCCc--hhHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccce
Q 002029 621 RSSP--KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI 678 (978)
Q Consensus 621 r~sP--~qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~ 678 (978)
++.| ..|+..++.+.+..| +.|++|||+.||.+|++.|++||+|.+... ..+.+||+
T Consensus 202 ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~-~vk~~A~~ 263 (285)
T 3pgv_A 202 EVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQ-RLKDLHPE 263 (285)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHCTT
T ss_pred EEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCH-HHHHhCCC
Confidence 3444 369998888876555 679999999999999999999999965543 37888984
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.36 E-value=7.5e-07 Score=94.27 Aligned_cols=58 Identities=19% Similarity=0.180 Sum_probs=46.5
Q ss_pred hhHHHHHHHHHcc----CCCeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 625 KQKALVTRLVKTK----TSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 625 ~qK~~iV~~lk~~----~~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
-.|+..++.+.+. ....|+|||||.||.+|++.|++||+|.+......+..||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 4699888888765 336899999999999999999999999665423356678988765
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.35 E-value=1.3e-06 Score=93.45 Aligned_cols=58 Identities=29% Similarity=0.378 Sum_probs=48.2
Q ss_pred hhHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhch
Q 002029 625 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 683 (978)
Q Consensus 625 ~qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f 683 (978)
..|+..++.+.++.| +.|+++|||.||.+|++.|++||+|.+.. ..++.+||++..+.
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~-~~~k~~Ad~v~~~~ 253 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNAS-EKVQSVADFVTDTV 253 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHTCSEECCCT
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCc-HHHHHhcCEeeCCC
Confidence 379988888776554 57999999999999999999999996554 34888999998763
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=5.6e-07 Score=91.85 Aligned_cols=126 Identities=21% Similarity=0.259 Sum_probs=83.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.+++.++++.|++.|+++.++||+....+..+...+|+...-...+.....
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 128 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDG--------------------------- 128 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECC---------------------------
Confidence 57789999999999999999999999988887777777762100000000000
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEe-CCchhHHHHHHHHHccCC---CeEEE
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTKTS---STTLA 644 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r-~sP~qK~~iV~~lk~~~~---~~v~a 644 (978)
.++|+ +... +.+..|...+..+.+..| +.+++
T Consensus 129 --------------------~~~~~------------------------~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~ 164 (211)
T 1l7m_A 129 --------------------KLTGD------------------------VEGEVLKENAKGEILEKIAKIEGINLEDTVA 164 (211)
T ss_dssp --------------------EEEEE------------------------EECSSCSTTHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------EEcCC------------------------cccCccCCccHHHHHHHHHHHcCCCHHHEEE
Confidence 00000 1111 123567666655544333 57999
Q ss_pred EcCCcCCHHHhhhccccccccCCccchhccccceehhc--hhhhH
Q 002029 645 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLE 687 (978)
Q Consensus 645 iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~--f~~l~ 687 (978)
+||+.||++|++.|++++++.+.+. .+..||+++.+ +..+.
T Consensus 165 iGD~~~Di~~~~~ag~~~~~~~~~~--~~~~a~~v~~~~~~~~l~ 207 (211)
T 1l7m_A 165 VGDGANDISMFKKAGLKIAFCAKPI--LKEKADICIEKRDLREIL 207 (211)
T ss_dssp EECSGGGHHHHHHCSEEEEESCCHH--HHTTCSEEECSSCGGGGG
T ss_pred EecChhHHHHHHHCCCEEEECCCHH--HHhhcceeecchhHHHHH
Confidence 9999999999999999999864432 56679999876 55443
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=7.3e-07 Score=89.97 Aligned_cols=98 Identities=12% Similarity=0.113 Sum_probs=72.9
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhh
Q 002029 496 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 575 (978)
Q Consensus 496 ~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (978)
.+|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~--------------------------------------------- 94 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH--------------------------------------------- 94 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce---------------------------------------------
Confidence 38999999999999999999999999999888731
Q ss_pred hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccC---CCeEEEEcCCcCCH
Q 002029 576 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT---SSTTLAIGDGANDV 652 (978)
Q Consensus 576 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~---~~~v~aiGDG~ND~ 652 (978)
+|.. ...|...++.+.+.. ...+++|||+.||+
T Consensus 95 ------------------------------------------~~~~--~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di 130 (188)
T 2r8e_A 95 ------------------------------------------LYQG--QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDW 130 (188)
T ss_dssp ------------------------------------------EECS--CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGH
T ss_pred ------------------------------------------eecC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 1111 123344444433322 36799999999999
Q ss_pred HHhhhccccccccCCccchhccccceehhch
Q 002029 653 GMLQEADIGVGISGVEGMQAVMSSDIAIAQF 683 (978)
Q Consensus 653 ~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f 683 (978)
+|.+.|++++.+.+.. ..++..||+++.+.
T Consensus 131 ~~a~~ag~~~~~~~~~-~~~~~~ad~v~~~~ 160 (188)
T 2r8e_A 131 PVMEKVGLSVAVADAH-PLLIPRADYVTRIA 160 (188)
T ss_dssp HHHTTSSEEEECTTSC-TTTGGGSSEECSSC
T ss_pred HHHHHCCCEEEecCcC-HHHHhcCCEEEeCC
Confidence 9999999999874332 23567899999885
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.31 E-value=1e-06 Score=90.25 Aligned_cols=133 Identities=17% Similarity=0.223 Sum_probs=86.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
.+.+++.++++.|+++|+++.++|+.....+..+.+..|+..... +..
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~--~~~------------------------------ 129 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENI--FAV------------------------------ 129 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGE--EEE------------------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccE--EEe------------------------------
Confidence 388999999999999999999999999999999999988742110 000
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCC
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 648 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG 648 (978)
.+++++.... ..+.....+|..|...+........+.++|+||+
T Consensus 130 ------------------~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~ 173 (219)
T 3kd3_A 130 ------------------ETIWNSDGSF------------------KELDNSNGACDSKLSAFDKAKGLIDGEVIAIGDG 173 (219)
T ss_dssp ------------------EEEECTTSBE------------------EEEECTTSTTTCHHHHHHHHGGGCCSEEEEEESS
T ss_pred ------------------eeeecCCCce------------------eccCCCCCCcccHHHHHHHHhCCCCCCEEEEECC
Confidence 0011000000 0011223345566665554422256789999999
Q ss_pred cCCHHHhhh----ccccccccCCccchhccccceehhchhhhHHHH
Q 002029 649 ANDVGMLQE----ADIGVGISGVEGMQAVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 649 ~ND~~ml~~----AdvGI~i~g~e~~~a~~asD~vi~~f~~l~~ll 690 (978)
.||++|+++ +.||+++.. .....+..+|+++.++..+..+|
T Consensus 174 ~~Di~~~~~G~~~~~v~~~~~~-~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 174 YTDYQLYEKGYATKFIAYMEHI-EREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp HHHHHHHHHTSCSEEEEECSSC-CCHHHHHHCSEEESSHHHHHHHH
T ss_pred HhHHHHHhCCCCcEEEeccCcc-ccHHHHhhcceeeCCHHHHHHhh
Confidence 999999965 334444422 22225667999999988877663
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.28 E-value=3.2e-07 Score=100.14 Aligned_cols=61 Identities=15% Similarity=0.231 Sum_probs=48.4
Q ss_pred eCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehh-c
Q 002029 621 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA-Q 682 (978)
Q Consensus 621 r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~-~ 682 (978)
++.|. .|+..++.+.+..| ..|+++||+.||.+|++.|++||+|.+... ..+..||+++. +
T Consensus 217 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~~k~~a~~v~~~~ 283 (301)
T 2b30_A 217 EVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATD-SAKSHAKCVLPVS 283 (301)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCH-HHHHHSSEECSSC
T ss_pred EecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcH-HHHhhCCEEEccC
Confidence 33444 79999988876544 579999999999999999999999965433 36678999987 5
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.25 E-value=1.2e-06 Score=90.13 Aligned_cols=129 Identities=19% Similarity=0.255 Sum_probs=88.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
-++.+++.++++.|++.|+++.++|+.....+..+.+.+|+...-...+..+..
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~-------------------------- 127 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEND-------------------------- 127 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT--------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCC--------------------------
Confidence 468999999999999999999999999999999999988874321111111100
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeC-CchhHHHHHHHHHcc---CCCeEE
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS-SPKQKALVTRLVKTK---TSSTTL 643 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~-sP~qK~~iV~~lk~~---~~~~v~ 643 (978)
.++| .+...+ .+..|..+++.+.+. ....++
T Consensus 128 ---------------------~~~~------------------------~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i 162 (217)
T 3m1y_A 128 ---------------------ALNG------------------------LVTGHMMFSHSKGEMLLVLQRLLNISKTNTL 162 (217)
T ss_dssp ---------------------EEEE------------------------EEEESCCSTTHHHHHHHHHHHHHTCCSTTEE
T ss_pred ---------------------EEEe------------------------eeccCCCCCCChHHHHHHHHHHcCCCHhHEE
Confidence 0000 011111 235566666655543 336799
Q ss_pred EEcCCcCCHHHhhhccccccccCCccchhccccceehhc--hhhhHHH
Q 002029 644 AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERL 689 (978)
Q Consensus 644 aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~--f~~l~~l 689 (978)
+|||+.||++|++.|++++++.+.+. .+..||+++.+ +..+..+
T Consensus 163 ~vGDs~~Di~~a~~aG~~~~~~~~~~--l~~~ad~v~~~~dl~~~~~~ 208 (217)
T 3m1y_A 163 VVGDGANDLSMFKHAHIKIAFNAKEV--LKQHATHCINEPDLALIKPL 208 (217)
T ss_dssp EEECSGGGHHHHTTCSEEEEESCCHH--HHTTCSEEECSSBGGGGTTC
T ss_pred EEeCCHHHHHHHHHCCCeEEECccHH--HHHhcceeecccCHHHHHHH
Confidence 99999999999999999999944443 67889999876 3334444
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.25 E-value=4e-07 Score=100.84 Aligned_cols=76 Identities=17% Similarity=0.275 Sum_probs=56.7
Q ss_pred chhHHHHHHHHHccC-CCeEEEEcCCcCCHHHhhhc----cccccccCCccchhccccceehhc--h----hhhHHHHHH
Q 002029 624 PKQKALVTRLVKTKT-SSTTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDIAIAQ--F----RFLERLLLV 692 (978)
Q Consensus 624 P~qK~~iV~~lk~~~-~~~v~aiGDG~ND~~ml~~A----dvGI~i~g~e~~~a~~asD~vi~~--f----~~l~~lll~ 692 (978)
+.+|+..++.+.... .+.|+++|||.||++|++.| ++||+| +.. ..++..||+++.+ . ..|.++ +.
T Consensus 205 g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~-~~lk~~Ad~v~~~~~~dGV~~~l~~~-~~ 281 (332)
T 1y8a_A 205 AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGN-EYALKHADVVIISPTAMSEAKVIELF-ME 281 (332)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCC-HHHHTTCSEEEECSSTHHHHHHHHHH-HH
T ss_pred CCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCC-HHHHhhCcEEecCCCCCHHHHHHHHH-HH
Confidence 568999888665311 14599999999999999999 999999 543 3378899999876 2 235555 68
Q ss_pred hhhhhhhHhhH
Q 002029 693 HGHWCYRRISS 703 (978)
Q Consensus 693 ~gR~~~~~i~~ 703 (978)
.||..+ ++-+
T Consensus 282 ~~~~~~-~~~~ 291 (332)
T 1y8a_A 282 RKERAF-EVLS 291 (332)
T ss_dssp HGGGGG-GGGG
T ss_pred cCCchh-HHHH
Confidence 899877 5444
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.24 E-value=1.4e-06 Score=99.70 Aligned_cols=137 Identities=20% Similarity=0.216 Sum_probs=93.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.||+.++++.|++.|+++.++||.....+..+++.+|+-..-...+.+...
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg--------------------------- 308 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDG--------------------------- 308 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETT---------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCC---------------------------
Confidence 79999999999999999999999999999999999999983211111100000
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCC---CeEEEE
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAI 645 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~---~~v~ai 645 (978)
.++|.... .-..++.|..+++.+.+..| ..+++|
T Consensus 309 --------------------~~tg~~~~-----------------------~v~~~kpk~~~~~~~~~~~gi~~~~~i~v 345 (415)
T 3p96_A 309 --------------------TLTGRVVG-----------------------PIIDRAGKATALREFAQRAGVPMAQTVAV 345 (415)
T ss_dssp --------------------EEEEEECS-----------------------SCCCHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred --------------------EEEeeEcc-----------------------CCCCCcchHHHHHHHHHHcCcChhhEEEE
Confidence 11111000 00125667777766655433 679999
Q ss_pred cCCcCCHHHhhhccccccccCCccchhccccceehhc--hhhhHHHHHHhhhhhh
Q 002029 646 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCY 698 (978)
Q Consensus 646 GDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~ 698 (978)
|||.||++|++.|++|+++.+.+. .+..||+++.. +..+..+ +-.+|.-+
T Consensus 346 GD~~~Di~~a~~aG~~va~~~~~~--~~~~ad~~i~~~~l~~ll~~-l~~~~~~~ 397 (415)
T 3p96_A 346 GDGANDIDMLAAAGLGIAFNAKPA--LREVADASLSHPYLDTVLFL-LGVTRGEI 397 (415)
T ss_dssp ECSGGGHHHHHHSSEEEEESCCHH--HHHHCSEEECSSCTTHHHHH-TTCCHHHH
T ss_pred ECCHHHHHHHHHCCCeEEECCCHH--HHHhCCEEEccCCHHHHHHH-hCCCHHHH
Confidence 999999999999999999954443 67789999765 4445444 44444433
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.20 E-value=1.1e-06 Score=94.35 Aligned_cols=58 Identities=21% Similarity=0.176 Sum_probs=46.9
Q ss_pred hhHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhch
Q 002029 625 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 683 (978)
Q Consensus 625 ~qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f 683 (978)
..|...++.+.+..| ..++++||+.||.+|++.|++||+|.+.. ...+..||+++.+.
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~-~~~k~~a~~v~~~~ 250 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAA-ENIKQIARYATDDN 250 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCC-HHHHHHCSEECCCG
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCcc-HHHHHhCCeeCcCC
Confidence 479988888776533 57999999999999999999999985543 33677899998763
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=3e-06 Score=86.40 Aligned_cols=128 Identities=19% Similarity=0.112 Sum_probs=86.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccC--ceEEEEecCCCcccccchhhhHHHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQG--MRQVIISSETPESKTLEKSEDKSAAAAALKASV 565 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~--~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (978)
-++.+++.++++.|++.|+++.++|+.....+..+....|+...- ..
T Consensus 69 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~------------------------------- 117 (205)
T 3m9l_A 69 SRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEAD------------------------------- 117 (205)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGG-------------------------------
T ss_pred CCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcce-------------------------------
Confidence 357899999999999999999999999999988888888873211 00
Q ss_pred HHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEE
Q 002029 566 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAI 645 (978)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~ai 645 (978)
+++++. ....-.|.--..+.+.+.- ....+++|
T Consensus 118 -----------------------i~~~~~-----------------------~~~kp~~~~~~~~~~~~g~-~~~~~i~i 150 (205)
T 3m9l_A 118 -----------------------VLGRDE-----------------------APPKPHPGGLLKLAEAWDV-SPSRMVMV 150 (205)
T ss_dssp -----------------------EECTTT-----------------------SCCTTSSHHHHHHHHHTTC-CGGGEEEE
T ss_pred -----------------------EEeCCC-----------------------CCCCCCHHHHHHHHHHcCC-CHHHEEEE
Confidence 111000 0000011111222232222 33679999
Q ss_pred cCCcCCHHHhhhccc-cccccCCccchhccccceehhchhhhHHHHHHhh
Q 002029 646 GDGANDVGMLQEADI-GVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHG 694 (978)
Q Consensus 646 GDG~ND~~ml~~Adv-GI~i~g~e~~~a~~asD~vi~~f~~l~~lll~~g 694 (978)
||+.||+.|.+.|++ +|++..... ..+..+|+++.++..|..++=.++
T Consensus 151 GD~~~Di~~a~~aG~~~i~v~~~~~-~~~~~ad~v~~~~~el~~~~~~~~ 199 (205)
T 3m9l_A 151 GDYRFDLDCGRAAGTRTVLVNLPDN-PWPELTDWHARDCAQLRDLLSAEG 199 (205)
T ss_dssp ESSHHHHHHHHHHTCEEEECSSSSC-SCGGGCSEECSSHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHcCCEEEEEeCCCC-cccccCCEEeCCHHHHHHHHHhcc
Confidence 999999999999999 898854432 256679999999888887743333
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.18 E-value=1.8e-06 Score=94.54 Aligned_cols=120 Identities=18% Similarity=0.195 Sum_probs=82.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.||+.++++.|+++|+++.++||.....+..+.+.+|+..--...+..+..
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg--------------------------- 231 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDN--------------------------- 231 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETT---------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCC---------------------------
Confidence 48999999999999999999999999999999999999983211111111100
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEe-CCchhHHHHHHHHHcc---CCCeEEE
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTK---TSSTTLA 644 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r-~sP~qK~~iV~~lk~~---~~~~v~a 644 (978)
.++|. +.+. ..++.|..+++.+.+. ....+++
T Consensus 232 --------------------~~tg~------------------------i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~ 267 (317)
T 4eze_A 232 --------------------VLTDN------------------------ITLPIMNAANKKQTLVDLAARLNIATENIIA 267 (317)
T ss_dssp --------------------EEEEE------------------------ECSSCCCHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------eeeee------------------------EecccCCCCCCHHHHHHHHHHcCCCcceEEE
Confidence 00000 0000 1234566555554433 3367999
Q ss_pred EcCCcCCHHHhhhccccccccCCccchhccccceehh
Q 002029 645 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA 681 (978)
Q Consensus 645 iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~ 681 (978)
|||+.||++|.+.|++|+++.+.+. .+..+|.++.
T Consensus 268 VGDs~~Di~aa~~AG~~va~~~~~~--~~~~a~~~i~ 302 (317)
T 4eze_A 268 CGDGANDLPMLEHAGTGIAWKAKPV--VREKIHHQIN 302 (317)
T ss_dssp EECSGGGHHHHHHSSEEEEESCCHH--HHHHCCEEES
T ss_pred EeCCHHHHHHHHHCCCeEEeCCCHH--HHHhcCeeeC
Confidence 9999999999999999999954433 5567777764
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.17 E-value=2.3e-06 Score=89.21 Aligned_cols=129 Identities=23% Similarity=0.258 Sum_probs=86.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
.++.+++.+.++.|++.|+++.++|+.....+..+.+..|+...-..
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 149 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV--------------------------------- 149 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee---------------------------------
Confidence 45789999999999999999999999999988888888886432111
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcC
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 647 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGD 647 (978)
++.++... ...-.|+--..+.+.+.- ....|++|||
T Consensus 150 ---------------------~~~~~~~~----------------------~~kp~~~~~~~~~~~lg~-~~~~~i~vGD 185 (237)
T 4ex6_A 150 ---------------------IAGDDSVE----------------------RGKPHPDMALHVARGLGI-PPERCVVIGD 185 (237)
T ss_dssp ---------------------EECTTTSS----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEES
T ss_pred ---------------------EEeCCCCC----------------------CCCCCHHHHHHHHHHcCC-CHHHeEEEcC
Confidence 11111100 000112222233333332 4468999999
Q ss_pred CcCCHHHhhhccc---cccccCCccchhcc-ccceehhchhhhHHHHHHhh
Q 002029 648 GANDVGMLQEADI---GVGISGVEGMQAVM-SSDIAIAQFRFLERLLLVHG 694 (978)
Q Consensus 648 G~ND~~ml~~Adv---GI~i~g~e~~~a~~-asD~vi~~f~~l~~lll~~g 694 (978)
+.||+.|.+.|++ +|++........+. .+|+++.++..+..+ +..|
T Consensus 186 ~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~-l~~~ 235 (237)
T 4ex6_A 186 GVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTA-VLDG 235 (237)
T ss_dssp SHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHH-HHHC
T ss_pred CHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHH-HHcc
Confidence 9999999999999 77764332222333 799999998888877 4444
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=1e-05 Score=85.95 Aligned_cols=54 Identities=15% Similarity=0.239 Sum_probs=44.6
Q ss_pred hhHHHHHHHHHccCC-----CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 625 KQKALVTRLVKTKTS-----STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 625 ~qK~~iV~~lk~~~~-----~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
..|...++.+.+..| ..++++||+.||.+|++.|++||+|.+... . +++++..+
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~--~--~~~~~~~~ 233 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP--P--EGVLATPA 233 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC--C--TTCEECSS
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh--c--CCcEEeCC
Confidence 589999888877554 679999999999999999999999966554 2 67777665
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.12 E-value=5.2e-06 Score=85.40 Aligned_cols=124 Identities=11% Similarity=0.084 Sum_probs=79.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.+++.+.++.|++.|++++++|+.....+..+....|+...-...
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~--------------------------------- 140 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDAL--------------------------------- 140 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEE---------------------------------
Confidence 46799999999999999999999999988877777777763211111
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCC
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 648 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG 648 (978)
+.+.... ...-.|.--..+.+.+.- ....+++|||+
T Consensus 141 ---------------------~~~~~~~----------------------~~kp~~~~~~~~~~~~~i-~~~~~i~iGD~ 176 (226)
T 1te2_A 141 ---------------------ASAEKLP----------------------YSKPHPQVYLDCAAKLGV-DPLTCVALEDS 176 (226)
T ss_dssp ---------------------EECTTSS----------------------CCTTSTHHHHHHHHHHTS-CGGGEEEEESS
T ss_pred ---------------------EeccccC----------------------CCCCChHHHHHHHHHcCC-CHHHeEEEeCC
Confidence 1100000 000011111223333332 34679999999
Q ss_pred cCCHHHhhhccccccccCCc---cchhccccceehhchhhhHHH
Q 002029 649 ANDVGMLQEADIGVGISGVE---GMQAVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 649 ~ND~~ml~~AdvGI~i~g~e---~~~a~~asD~vi~~f~~l~~l 689 (978)
.||++|++.|++++.+-... ....+..+|+++.++..+..-
T Consensus 177 ~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 177 VNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAK 220 (226)
T ss_dssp HHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCHH
T ss_pred HHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhHH
Confidence 99999999999998662111 112466799999987775554
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.11 E-value=1.2e-05 Score=83.94 Aligned_cols=182 Identities=12% Similarity=0.139 Sum_probs=95.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc----cCceEEEEecCCCcccccchhhhHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR----QGMRQVIISSETPESKTLEKSEDKSAAAAALKA 563 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~----~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (978)
..+.+.+.+++++|+++|++++++||+....+..+.+.+|+-. .++..+..+++......+ +...+.++.. .
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l--~~~~~i~~~~-~- 94 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASM--DEEWILWNEI-R- 94 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCC--SHHHHHHHHH-H-
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccH--HHHHHHHHHH-H-
Confidence 3467788999999999999999999999999999998887522 222222111110001111 1111111111 0
Q ss_pred HHHHHHHhhhhh-hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCee---EEEeCCc--hhHHHHHHHHHcc
Q 002029 564 SVLHQLIRGKEL-LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASV---ICCRSSP--KQKALVTRLVKTK 637 (978)
Q Consensus 564 ~~~~~~~~~~~~-~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~v---i~~r~sP--~qK~~iV~~lk~~ 637 (978)
.+. ++... .... ..... +.+.+.+. ..+........+......+ .+....| ..|...++.+.+.
T Consensus 95 ---~~~-~~~~~~~~~~-~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~ 164 (231)
T 1wr8_A 95 ---KRF-PNARTSYTMP-DRRAG--LVIMRETI---NVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEF 164 (231)
T ss_dssp ---HHC-TTCCBCTTGG-GCSSC--EEECTTTS---CHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHH
T ss_pred ---HhC-CCceEEecCC-Cceee--EEEECCCC---CHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHH
Confidence 000 00000 0000 00001 11211000 0111222222111112211 1123333 4688888877654
Q ss_pred CC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhchh
Q 002029 638 TS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 684 (978)
Q Consensus 638 ~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~ 684 (978)
.| ..++++||+.||.+|++.|++|+++.+.. ...+..||+++.+..
T Consensus 165 ~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~~-~~~~~~a~~v~~~~~ 213 (231)
T 1wr8_A 165 LGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAP-KILKENADYVTKKEY 213 (231)
T ss_dssp HTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHTTCSEECSSCH
T ss_pred cCCCHHHEEEECCCHHHHHHHHHcCCeEEecCCC-HHHHhhCCEEecCCC
Confidence 33 57999999999999999999999985443 235678999987633
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.08 E-value=5.6e-06 Score=85.46 Aligned_cols=121 Identities=17% Similarity=0.120 Sum_probs=85.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
-++.+++.+.++.|++.|+++.++|+.....+..+.+..|+...-..
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 131 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDA--------------------------------- 131 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheee---------------------------------
Confidence 36789999999999999999999999999888888888886432111
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCC--chhHHHHHHHHHcc---CCCeE
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS--PKQKALVTRLVKTK---TSSTT 642 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~s--P~qK~~iV~~lk~~---~~~~v 642 (978)
++.+... ...|...++.+.+. ....|
T Consensus 132 -------------------------------------------------~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 162 (226)
T 3mc1_A 132 -------------------------------------------------IVGSSLDGKLSTKEDVIRYAMESLNIKSDDA 162 (226)
T ss_dssp -------------------------------------------------EEEECTTSSSCSHHHHHHHHHHHHTCCGGGE
T ss_pred -------------------------------------------------eeccCCCCCCCCCHHHHHHHHHHhCcCcccE
Confidence 1122211 12244444433332 33689
Q ss_pred EEEcCCcCCHHHhhhccc---cccccCCccch-hccccceehhchhhhHHHH
Q 002029 643 LAIGDGANDVGMLQEADI---GVGISGVEGMQ-AVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 643 ~aiGDG~ND~~ml~~Adv---GI~i~g~e~~~-a~~asD~vi~~f~~l~~ll 690 (978)
++|||+.||+.|.+.|++ +|++....... .+..+|+++.++..+..++
T Consensus 163 i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 163 IMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp EEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred EEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 999999999999999999 66553322221 2468999999998888874
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.08 E-value=1.3e-05 Score=81.57 Aligned_cols=125 Identities=19% Similarity=0.164 Sum_probs=88.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.+++.++++.|++. +++.++|+.....+..+.+.+|+...-...+....+.
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 121 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 121 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS--------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCc--------------------------
Confidence 5789999999999999 9999999999999999999988742110001110000
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCC
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 648 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG 648 (978)
.....-.-.|..|...++.+.. ....+++|||+
T Consensus 122 ----------------------------------------------~~~~~~~p~p~~~~~~l~~l~~-~~~~~~~iGD~ 154 (206)
T 1rku_A 122 ----------------------------------------------RVVGYQLRQKDPKRQSVIAFKS-LYYRVIAAGDS 154 (206)
T ss_dssp ----------------------------------------------CEEEEECCSSSHHHHHHHHHHH-TTCEEEEEECS
T ss_pred ----------------------------------------------eEEeeecCCCchHHHHHHHHHh-cCCEEEEEeCC
Confidence 0000112568889999998876 67799999999
Q ss_pred cCCHHHhhhccccccccCCccchhcc-cccee-hhchhhhHHH
Q 002029 649 ANDVGMLQEADIGVGISGVEGMQAVM-SSDIA-IAQFRFLERL 689 (978)
Q Consensus 649 ~ND~~ml~~AdvGI~i~g~e~~~a~~-asD~v-i~~f~~l~~l 689 (978)
.||+.|.+.|++++.+.+.+. .+. +.+++ +.++..+..+
T Consensus 155 ~~Di~~a~~aG~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~ 195 (206)
T 1rku_A 155 YNDTTMLSEAHAGILFHAPEN--VIREFPQFPAVHTYEDLKRE 195 (206)
T ss_dssp STTHHHHHHSSEEEEESCCHH--HHHHCTTSCEECSHHHHHHH
T ss_pred hhhHHHHHhcCccEEECCcHH--HHHHHhhhccccchHHHHHH
Confidence 999999999999998743332 233 44554 6666666555
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.08 E-value=7.1e-07 Score=95.62 Aligned_cols=62 Identities=24% Similarity=0.358 Sum_probs=48.1
Q ss_pred eCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhch
Q 002029 621 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 683 (978)
Q Consensus 621 r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f 683 (978)
.+.|. .|+..++.+.+..| ..++++||+.||.+|++.|++|++|.+.. ...+..||+++.+.
T Consensus 183 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~-~~~~~~a~~v~~~~ 249 (268)
T 1nf2_A 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAI-EKVKEASDIVTLTN 249 (268)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSC-HHHHHHCSEECCCT
T ss_pred EEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCC-HHHHhhCCEEEccC
Confidence 44454 79988888776433 67999999999999999999999995443 33567799988763
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.04 E-value=3.3e-05 Score=83.43 Aligned_cols=58 Identities=22% Similarity=0.270 Sum_probs=46.5
Q ss_pred hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhchh
Q 002029 626 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 684 (978)
Q Consensus 626 qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~ 684 (978)
.|+..++.+.+..| ..++++||+.||.+|++.|++||+|.+.. ...+..||+++.+..
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~-~~~~~~a~~v~~~~~ 276 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAR-EDIKSIADAVTLTND 276 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCC-HHHHHHCSEECCCGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCC-HHHHhhCceeecCCC
Confidence 69988888776544 57999999999999999999999995443 336678999887643
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.04 E-value=3.7e-06 Score=89.55 Aligned_cols=63 Identities=24% Similarity=0.357 Sum_probs=49.3
Q ss_pred hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhchhh--hHHH
Q 002029 626 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERL 689 (978)
Q Consensus 626 qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~~--l~~l 689 (978)
.|...++.+.+..| ..++++||+.||.+|++.|++|+++.+.. ...+..||+++.+... +..+
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~-~~~~~~a~~v~~~~~~dGv~~~ 254 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAK-EDVKAAADYVTAPIDEDGISKA 254 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHSSEECCCGGGTHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCcc-HHHHhhCCEEeccCchhhHHHH
Confidence 78888877765433 67999999999999999999999985433 3367789999887665 6555
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.03 E-value=4.3e-06 Score=86.58 Aligned_cols=129 Identities=19% Similarity=0.239 Sum_probs=86.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCc--eEEEEecCCCcccccchhhhHHHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM--RQVIISSETPESKTLEKSEDKSAAAAALKASV 565 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~--~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (978)
-++.||+.++++.|+++|++++++||.....+..+.+.+|+..... ..+..+..
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~------------------------ 140 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFN------------------------ 140 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTT------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCC------------------------
Confidence 3689999999999999999999999999999999999999842110 00000000
Q ss_pred HHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeC-----CchhHHHHHHHHHccCC-
Q 002029 566 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS-----SPKQKALVTRLVKTKTS- 639 (978)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~-----sP~qK~~iV~~lk~~~~- 639 (978)
..+..... .+..|..+++.+.+..|
T Consensus 141 -------------------------------------------------~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~ 171 (225)
T 1nnl_A 141 -------------------------------------------------GEYAGFDETQPTAESGGKGKVIKLLKEKFHF 171 (225)
T ss_dssp -------------------------------------------------SCEEEECTTSGGGSTTHHHHHHHHHHHHHCC
T ss_pred -------------------------------------------------CcEecCCCCCcccCCCchHHHHHHHHHHcCC
Confidence 00011111 12356666665544333
Q ss_pred CeEEEEcCCcCCHHHhhhccccccccCCcc-chhccccceehhchhhhHHH
Q 002029 640 STTLAIGDGANDVGMLQEADIGVGISGVEG-MQAVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 640 ~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~-~~a~~asD~vi~~f~~l~~l 689 (978)
..+++|||+.||+.|.+.|+++|++..... ......+|+++.++..+..+
T Consensus 172 ~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (225)
T 1nnl_A 172 KKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGE 222 (225)
T ss_dssp SCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGCC-
T ss_pred CcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHHHH
Confidence 679999999999999999999887743221 12334689999887776544
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.01 E-value=1.3e-05 Score=83.24 Aligned_cols=41 Identities=15% Similarity=0.025 Sum_probs=38.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+|+.+.++.|++.|+++.++||.....+..+++.+|+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 57999999999999999999999999999999999999983
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.00 E-value=1.3e-05 Score=89.84 Aligned_cols=40 Identities=8% Similarity=0.193 Sum_probs=38.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++.|++.+.|+.|+++|++|+|+||...+.+..+|.++|+
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 4789999999999999999999999999999999999986
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.94 E-value=7.9e-05 Score=79.83 Aligned_cols=189 Identities=11% Similarity=0.094 Sum_probs=90.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc-----cccCceEEEEecCCC-------cccccchhhhHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL-----LRQGMRQVIISSETP-------ESKTLEKSEDKSA 556 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl-----~~~~~~~i~i~~~~~-------~~~~~~~~~~~~~ 556 (978)
.+-+.+.++|++|+++|++++++||+....+..+...+++ +..++..+..+.... ....++.+...+.
T Consensus 26 ~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~l~~~~~~~i 105 (275)
T 1xvi_A 26 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLV 105 (275)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCTTSTTTTEEECSSCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCcccccCceEEEecCCCHHHHHHH
Confidence 3557789999999999999999999999999999998875 334555444232111 1122333322222
Q ss_pred HHHHHHH-HHHHHHHhh-----hhhhcc--------ccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccC---eeEE
Q 002029 557 AAAALKA-SVLHQLIRG-----KELLDS--------SNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCA---SVIC 619 (978)
Q Consensus 557 ~~~~~~~-~~~~~~~~~-----~~~~~~--------~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~---~vi~ 619 (978)
+...... ......... ...... .........+.+.++.- . .+.+.+.+... ... +.-+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~l~~~--~~~~~~~~~~ 180 (275)
T 1xvi_A 106 LNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDE--R-MAQFTARLNEL--GLQFMQGARF 180 (275)
T ss_dssp HHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHH--H-HHHHHHHHHHT--TEEEEECSSC
T ss_pred HHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCHH--H-HHHHHHHHHhh--CeEEEECCce
Confidence 2221111 000000000 000000 00001111223322110 0 01122222211 011 0012
Q ss_pred EeCCch--hHHHHHHHHHccCC----Ce--EEEEcCCcCCHHHhhhccccccccCCcc--chhcc--ccc-eehhc
Q 002029 620 CRSSPK--QKALVTRLVKTKTS----ST--TLAIGDGANDVGMLQEADIGVGISGVEG--MQAVM--SSD-IAIAQ 682 (978)
Q Consensus 620 ~r~sP~--qK~~iV~~lk~~~~----~~--v~aiGDG~ND~~ml~~AdvGI~i~g~e~--~~a~~--asD-~vi~~ 682 (978)
..+.|. .|+..++.+.+..| .. ++++||+.||.+|++.|++||+|.+... ...+. .|| ++..+
T Consensus 181 leI~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~ 256 (275)
T 1xvi_A 181 WHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQR 256 (275)
T ss_dssp EEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC-------------------
T ss_pred EEEecCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccC
Confidence 334444 69888877765433 35 9999999999999999999999965431 22333 368 77654
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=97.92 E-value=1.1e-05 Score=79.01 Aligned_cols=105 Identities=14% Similarity=0.073 Sum_probs=75.3
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHH
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQL 569 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (978)
+.+++.++|+.|+++|+++.++||.....+..+.+.+|+..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------------------------------------- 77 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--------------------------------------- 77 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------------------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------------------------------------
Confidence 45677899999999999999999999999999999888731
Q ss_pred HhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHH-HHcc--CCCeEEEEc
Q 002029 570 IRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRL-VKTK--TSSTTLAIG 646 (978)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~-lk~~--~~~~v~aiG 646 (978)
.|.. +..|...++. +++. ..+.+++||
T Consensus 78 ------------------------------------------------~~~~--~kp~~~~~~~~~~~~~~~~~~~~~vG 107 (162)
T 2p9j_A 78 ------------------------------------------------IYTG--SYKKLEIYEKIKEKYSLKDEEIGFIG 107 (162)
T ss_dssp ------------------------------------------------EEEC--C--CHHHHHHHHHHTTCCGGGEEEEE
T ss_pred ------------------------------------------------hccC--CCCCHHHHHHHHHHcCCCHHHEEEEC
Confidence 1111 1112222222 2221 346799999
Q ss_pred CCcCCHHHhhhccccccccCCccchhccccceehhchh
Q 002029 647 DGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 684 (978)
Q Consensus 647 DG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~ 684 (978)
|+.||++|.+.|++++.+.+.. ...+..||+++.+..
T Consensus 108 D~~~Di~~a~~ag~~~~~~~~~-~~~~~~a~~v~~~~~ 144 (162)
T 2p9j_A 108 DDVVDIEVMKKVGFPVAVRNAV-EEVRKVAVYITQRNG 144 (162)
T ss_dssp CSGGGHHHHHHSSEEEECTTSC-HHHHHHCSEECSSCS
T ss_pred CCHHHHHHHHHCCCeEEecCcc-HHHHhhCCEEecCCC
Confidence 9999999999999998774322 225668999998744
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.87 E-value=1.5e-05 Score=83.21 Aligned_cols=121 Identities=17% Similarity=0.094 Sum_probs=83.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
-++.+++.++++.|++.|++++++|+.....+..+...+|+...-..
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 155 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKY--------------------------------- 155 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEE---------------------------------
Confidence 45789999999999999999999999999888888888887432111
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCC--chhHHHHHHHHHcc---C-CCe
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS--PKQKALVTRLVKTK---T-SST 641 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~s--P~qK~~iV~~lk~~---~-~~~ 641 (978)
++++... +.-|..+++.+.+. . ...
T Consensus 156 -------------------------------------------------~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~ 186 (240)
T 3sd7_A 156 -------------------------------------------------IAGSNLDGTRVNKNEVIQYVLDLCNVKDKDK 186 (240)
T ss_dssp -------------------------------------------------EEEECTTSCCCCHHHHHHHHHHHHTCCCGGG
T ss_pred -------------------------------------------------EEeccccCCCCCCHHHHHHHHHHcCCCCCCc
Confidence 1111111 12233333333222 4 568
Q ss_pred EEEEcCCcCCHHHhhhccc---cccccCCccch-hccccceehhchhhhHHHH
Q 002029 642 TLAIGDGANDVGMLQEADI---GVGISGVEGMQ-AVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 642 v~aiGDG~ND~~ml~~Adv---GI~i~g~e~~~-a~~asD~vi~~f~~l~~ll 690 (978)
+++|||+.||+.|.+.|++ +|+........ .+..+|+++.++..+..+|
T Consensus 187 ~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 187 VIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred EEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 9999999999999999999 44432222111 2367899999988887764
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.87 E-value=1.1e-05 Score=83.38 Aligned_cols=123 Identities=17% Similarity=0.067 Sum_probs=82.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+...-..
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 136 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKIN--------------------------------- 136 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSC---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhhe---------------------------------
Confidence 35789999999999999999999999999988888888876431110
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHcc---CCCeEEE
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLA 644 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~~~~v~a 644 (978)
++.+.... . ..-|..+++.+.+. ....+++
T Consensus 137 ---------------------~~~~~~~~------------------------~--~kp~~~~~~~~~~~l~~~~~~~i~ 169 (233)
T 3s6j_A 137 ---------------------IVTRDDVS------------------------Y--GKPDPDLFLAAAKKIGAPIDECLV 169 (233)
T ss_dssp ---------------------EECGGGSS------------------------C--CTTSTHHHHHHHHHTTCCGGGEEE
T ss_pred ---------------------eeccccCC------------------------C--CCCChHHHHHHHHHhCCCHHHEEE
Confidence 11111100 0 11122233322222 3367999
Q ss_pred EcCCcCCHHHhhhccc---cccccCCccchhcc-ccceehhchhhhHHHH
Q 002029 645 IGDGANDVGMLQEADI---GVGISGVEGMQAVM-SSDIAIAQFRFLERLL 690 (978)
Q Consensus 645 iGDG~ND~~ml~~Adv---GI~i~g~e~~~a~~-asD~vi~~f~~l~~ll 690 (978)
|||+.||+.|.+.|++ +|+.........+. .+|+++.++..+..+|
T Consensus 170 iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l 219 (233)
T 3s6j_A 170 IGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHL 219 (233)
T ss_dssp EESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTG
T ss_pred EeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHH
Confidence 9999999999999999 55443232222333 3899999988888773
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.87 E-value=1.6e-05 Score=83.44 Aligned_cols=124 Identities=20% Similarity=0.178 Sum_probs=81.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
.++.+++.++++.|++.|++++++|+.....+..+.+.+|+...-..
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~--------------------------------- 159 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSE--------------------------------- 159 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEE---------------------------------
Confidence 46789999999999999999999999999999999998887432111
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcC
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 647 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGD 647 (978)
++.+.... ...-.|+--..+.+.+.- ....+++|||
T Consensus 160 ---------------------~~~~~~~~----------------------~~Kp~~~~~~~~~~~~~~-~~~~~~~vGD 195 (243)
T 2hsz_A 160 ---------------------MLGGQSLP----------------------EIKPHPAPFYYLCGKFGL-YPKQILFVGD 195 (243)
T ss_dssp ---------------------EECTTTSS----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEES
T ss_pred ---------------------EEecccCC----------------------CCCcCHHHHHHHHHHhCc-ChhhEEEEcC
Confidence 11111100 000012222233344432 4467999999
Q ss_pred CcCCHHHhhhccccc-cccCC---ccchhccccceehhchhhhHH
Q 002029 648 GANDVGMLQEADIGV-GISGV---EGMQAVMSSDIAIAQFRFLER 688 (978)
Q Consensus 648 G~ND~~ml~~AdvGI-~i~g~---e~~~a~~asD~vi~~f~~l~~ 688 (978)
+.||+.|.+.|++++ ++... ........+|+++.++..+..
T Consensus 196 ~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~ 240 (243)
T 2hsz_A 196 SQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILK 240 (243)
T ss_dssp SHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGG
T ss_pred CHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHH
Confidence 999999999999984 44221 111135678999988776544
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.86 E-value=1.4e-05 Score=80.59 Aligned_cols=118 Identities=19% Similarity=0.183 Sum_probs=77.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
.+.+++.+.++.|++.|++++++|+....... .....|+...- .
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f-~---------------------------------- 128 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF-T---------------------------------- 128 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE-E----------------------------------
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe-e----------------------------------
Confidence 46899999999999999999999999887776 66666653210 0
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCC
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 648 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG 648 (978)
.++.+.... ...-.|+--..+.+.+.- ....+++|||+
T Consensus 129 -------------------~~~~~~~~~----------------------~~Kp~~~~~~~~~~~~~i-~~~~~~~iGD~ 166 (207)
T 2go7_A 129 -------------------EILTSQSGF----------------------VRKPSPEAATYLLDKYQL-NSDNTYYIGDR 166 (207)
T ss_dssp -------------------EEECGGGCC----------------------CCTTSSHHHHHHHHHHTC-CGGGEEEEESS
T ss_pred -------------------eEEecCcCC----------------------CCCCCcHHHHHHHHHhCC-CcccEEEECCC
Confidence 011110000 000112112233444432 44679999999
Q ss_pred cCCHHHhhhcccc-ccccCCccchhccccceehhchhhhHHH
Q 002029 649 ANDVGMLQEADIG-VGISGVEGMQAVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 649 ~ND~~ml~~AdvG-I~i~g~e~~~a~~asD~vi~~f~~l~~l 689 (978)
.||++|++.|+++ |++.... . .+|+++.++..+..+
T Consensus 167 ~nDi~~~~~aG~~~i~~~~~~-~----~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 167 TLDVEFAQNSGIQSINFLEST-Y----EGNHRIQALADISRI 203 (207)
T ss_dssp HHHHHHHHHHTCEEEESSCCS-C----TTEEECSSTTHHHHH
T ss_pred HHHHHHHHHCCCeEEEEecCC-C----CCCEEeCCHHHHHHH
Confidence 9999999999998 6774433 2 689999887776655
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=1.2e-05 Score=84.74 Aligned_cols=62 Identities=21% Similarity=0.313 Sum_probs=47.0
Q ss_pred eCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccc-------cceehhch
Q 002029 621 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMS-------SDIAIAQF 683 (978)
Q Consensus 621 r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~a-------sD~vi~~f 683 (978)
.+.|. .|+..++.+.+..| ..|+++||+.||.+|++.|++||+|.+.. ...+.. +|++..+.
T Consensus 155 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~-~~~k~~a~~~~~~a~~v~~~~ 228 (244)
T 1s2o_A 155 DLLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQ-PELLHWYDQWGDSRHYRAQSS 228 (244)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCC-HHHHHHHHHHCCTTEEECSSC
T ss_pred EeccCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCc-HHHHHHHhcccccceeecCCc
Confidence 34454 79998888876544 57999999999999999999999995433 235553 78887653
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.85 E-value=2.2e-05 Score=81.17 Aligned_cols=125 Identities=18% Similarity=0.146 Sum_probs=83.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
-++.+++.++++.|++.|+++.++|+.....+..+.+.+|+...-..
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~--------------------------------- 128 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDL--------------------------------- 128 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheE---------------------------------
Confidence 46789999999999999999999999999888888888886421111
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcC
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 647 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGD 647 (978)
++.+... ....-.|+--..+.+.+.- ....+++|||
T Consensus 129 ---------------------i~~~~~~----------------------~~~Kp~~~~~~~~~~~~~~-~~~~~~~vGD 164 (222)
T 2nyv_A 129 ---------------------IVGGDTF----------------------GEKKPSPTPVLKTLEILGE-EPEKALIVGD 164 (222)
T ss_dssp ---------------------EECTTSS----------------------CTTCCTTHHHHHHHHHHTC-CGGGEEEEES
T ss_pred ---------------------EEecCcC----------------------CCCCCChHHHHHHHHHhCC-CchhEEEECC
Confidence 1111100 0001112222333444432 4467999999
Q ss_pred CcCCHHHhhhcccc-ccccC-CccchhccccceehhchhhhHHHH
Q 002029 648 GANDVGMLQEADIG-VGISG-VEGMQAVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 648 G~ND~~ml~~AdvG-I~i~g-~e~~~a~~asD~vi~~f~~l~~ll 690 (978)
+.||+.|.+.|+++ |++.. ...... ..+|+++.++..+..++
T Consensus 165 ~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 165 TDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp SHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHH
T ss_pred CHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHH
Confidence 99999999999988 55532 211112 56899999888877763
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.82 E-value=2.3e-05 Score=79.63 Aligned_cols=123 Identities=11% Similarity=0.052 Sum_probs=81.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.+++.+.++.|++.|++++++|+.....+..+.+..|+...-..
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 134 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDI---------------------------------- 134 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheee----------------------------------
Confidence 5789999999999999999999999999999888888887432111
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCC
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 648 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG 648 (978)
++.+.... ...-.|+--..+.+.+.- ....+++|||+
T Consensus 135 --------------------~~~~~~~~----------------------~~kp~~~~~~~~~~~~~~-~~~~~~~iGD~ 171 (214)
T 3e58_A 135 --------------------VLSGEEFK----------------------ESKPNPEIYLTALKQLNV-QASRALIIEDS 171 (214)
T ss_dssp --------------------EEEGGGCS----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEECS
T ss_pred --------------------Eeeccccc----------------------CCCCChHHHHHHHHHcCC-ChHHeEEEecc
Confidence 11111000 000111122233344432 44679999999
Q ss_pred cCCHHHhhhccccccccCC-ccchhccccceehhchhhhHH
Q 002029 649 ANDVGMLQEADIGVGISGV-EGMQAVMSSDIAIAQFRFLER 688 (978)
Q Consensus 649 ~ND~~ml~~AdvGI~i~g~-e~~~a~~asD~vi~~f~~l~~ 688 (978)
.||+.|.+.|++++.+-+. ........+|+++.++..+..
T Consensus 172 ~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~ 212 (214)
T 3e58_A 172 EKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLD 212 (214)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGG
T ss_pred HhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHh
Confidence 9999999999998754232 111134678999988776654
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.82 E-value=3.8e-05 Score=79.49 Aligned_cols=116 Identities=16% Similarity=0.152 Sum_probs=79.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
-++.+++.+.++.|++.|+++.++|+.....+..+.+..|+...-..+
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i-------------------------------- 149 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSI-------------------------------- 149 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeE--------------------------------
Confidence 357899999999999999999999999999888888888874321111
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCC------chhHHHHHHHHHccCCC-
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS------PKQKALVTRLVKTKTSS- 640 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~s------P~qK~~iV~~lk~~~~~- 640 (978)
+++.-. |+--..+.+.+.- ...
T Consensus 150 --------------------------------------------------~~~~~~~~~Kp~~~~~~~~~~~lgi-~~~~ 178 (231)
T 3kzx_A 150 --------------------------------------------------IGSGDTGTIKPSPEPVLAALTNINI-EPSK 178 (231)
T ss_dssp --------------------------------------------------EEETSSSCCTTSSHHHHHHHHHHTC-CCST
T ss_pred --------------------------------------------------EcccccCCCCCChHHHHHHHHHcCC-Cccc
Confidence 111111 1111233344432 334
Q ss_pred eEEEEcCCcCCHHHhhhccc-cccccCCccchhccccceehhchhhhHHHH
Q 002029 641 TTLAIGDGANDVGMLQEADI-GVGISGVEGMQAVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 641 ~v~aiGDG~ND~~ml~~Adv-GI~i~g~e~~~a~~asD~vi~~f~~l~~ll 690 (978)
.+++|||+.||+.|.+.|++ +|.+...+. ..+|+++.++..+..+|
T Consensus 179 ~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~----~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 179 EVFFIGDSISDIQSAIEAGCLPIKYGSTNI----IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp TEEEEESSHHHHHHHHHTTCEEEEECC---------CCEEESSHHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHCCCeEEEECCCCC----CCCceeeCCHHHHHHHH
Confidence 79999999999999999997 556633322 36788999888877763
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.81 E-value=2.1e-05 Score=80.62 Aligned_cols=41 Identities=10% Similarity=0.015 Sum_probs=35.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
.+.+++.+.++.|++.|++++++|+.....+.......|+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 129 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD 129 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch
Confidence 35799999999999999999999999988888877777763
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.76 E-value=3.4e-05 Score=79.89 Aligned_cols=118 Identities=16% Similarity=0.178 Sum_probs=73.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.+++.++++.|++.|+++.++|+... +..+...+|+...-..
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~---------------------------------- 135 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHA---------------------------------- 135 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSE----------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCE----------------------------------
Confidence 4789999999999999999999999754 6666677776321100
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCC
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 648 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG 648 (978)
++.+... -...-.|+-=..+.+.+.- ....+++|||+
T Consensus 136 --------------------i~~~~~~----------------------~~~Kp~~~~~~~~~~~lgi-~~~~~i~vGDs 172 (233)
T 3nas_A 136 --------------------IVDPTTL----------------------AKGKPDPDIFLTAAAMLDV-SPADCAAIEDA 172 (233)
T ss_dssp --------------------ECCC-------------------------------CCHHHHHHHHHTS-CGGGEEEEECS
T ss_pred --------------------EeeHhhC----------------------CCCCCChHHHHHHHHHcCC-CHHHEEEEeCC
Confidence 1111100 0011111111233344432 44789999999
Q ss_pred cCCHHHhhhccccccccCCccchhccccceehhchhhhH
Q 002029 649 ANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLE 687 (978)
Q Consensus 649 ~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~~l~ 687 (978)
.||+.|.+.|++++.+.+.... .+ .+|+++.++..+.
T Consensus 173 ~~Di~~a~~aG~~~~~~~~~~~-~~-~ad~v~~s~~el~ 209 (233)
T 3nas_A 173 EAGISAIKSAGMFAVGVGQGQP-ML-GADLVVRQTSDLT 209 (233)
T ss_dssp HHHHHHHHHTTCEEEECC---------CSEECSSGGGCC
T ss_pred HHHHHHHHHcCCEEEEECCccc-cc-cCCEEeCChHhCC
Confidence 9999999999999977544332 33 8999999877644
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.75 E-value=6.6e-05 Score=77.34 Aligned_cols=116 Identities=18% Similarity=0.031 Sum_probs=78.8
Q ss_pred ccCCChHHHHHHHHHcC-CeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAG-IKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aG-Ikv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
++.+++.+.++.|++.| +++.++|+.....+..+...+|+...-.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~---------------------------------- 150 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD---------------------------------- 150 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh----------------------------------
Confidence 57899999999999999 9999999988888777777777632110
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHcc---CCCeEEE
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLA 644 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~~~~v~a 644 (978)
. +++...| |...++.+.+. ....+++
T Consensus 151 ------------------------------------------------~-~~~~~kp--k~~~~~~~~~~lgi~~~~~i~ 179 (234)
T 3ddh_A 151 ------------------------------------------------H-IEVMSDK--TEKEYLRLLSILQIAPSELLM 179 (234)
T ss_dssp ------------------------------------------------E-EEEESCC--SHHHHHHHHHHHTCCGGGEEE
T ss_pred ------------------------------------------------e-eeecCCC--CHHHHHHHHHHhCCCcceEEE
Confidence 0 2222223 44444443332 3467999
Q ss_pred EcCCc-CCHHHhhhcccccccc------CCccchhcc-ccceehhchhhhHHH
Q 002029 645 IGDGA-NDVGMLQEADIGVGIS------GVEGMQAVM-SSDIAIAQFRFLERL 689 (978)
Q Consensus 645 iGDG~-ND~~ml~~AdvGI~i~------g~e~~~a~~-asD~vi~~f~~l~~l 689 (978)
|||+. ||+.|.+.|++++.+- |........ .+|+++.++..+..+
T Consensus 180 iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~ 232 (234)
T 3ddh_A 180 VGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSL 232 (234)
T ss_dssp EESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHH
T ss_pred ECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHh
Confidence 99996 9999999999987542 111111123 449999998877654
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.74 E-value=4.1e-05 Score=78.96 Aligned_cols=125 Identities=15% Similarity=0.061 Sum_probs=82.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
-++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 141 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDH--------------------------------- 141 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSE---------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcce---------------------------------
Confidence 36789999999999999999999999998888888888776432111
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcC
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 647 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGD 647 (978)
++.+.... ...-.|.--..+.+.+.- ....+++|||
T Consensus 142 ---------------------~~~~~~~~----------------------~~kp~~~~~~~~~~~~~~-~~~~~~~iGD 177 (230)
T 3um9_A 142 ---------------------LISVDEVR----------------------LFKPHQKVYELAMDTLHL-GESEILFVSC 177 (230)
T ss_dssp ---------------------EEEGGGTT----------------------CCTTCHHHHHHHHHHHTC-CGGGEEEEES
T ss_pred ---------------------eEehhhcc----------------------cCCCChHHHHHHHHHhCC-CcccEEEEeC
Confidence 11111000 000011111122333322 3467999999
Q ss_pred CcCCHHHhhhccccccccC---CccchhccccceehhchhhhHHH
Q 002029 648 GANDVGMLQEADIGVGISG---VEGMQAVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 648 G~ND~~ml~~AdvGI~i~g---~e~~~a~~asD~vi~~f~~l~~l 689 (978)
+.||+.|.+.|++++.+-. ......+..+|+++.++..+..+
T Consensus 178 ~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (230)
T 3um9_A 178 NSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASR 222 (230)
T ss_dssp CHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHT
T ss_pred CHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHH
Confidence 9999999999999986622 11122345789999998877665
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.73 E-value=3.5e-05 Score=79.81 Aligned_cols=126 Identities=11% Similarity=0.022 Sum_probs=84.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 144 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDH--------------------------------- 144 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSE---------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCE---------------------------------
Confidence 45789999999999999999999999999888888888887432111
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcC
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 647 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGD 647 (978)
++.+.... ...-.|+--..+.+.+.- ....+++|||
T Consensus 145 ---------------------~~~~~~~~----------------------~~kp~~~~~~~~~~~~~~-~~~~~~~vGD 180 (233)
T 3umb_A 145 ---------------------VLSVDAVR----------------------LYKTAPAAYALAPRAFGV-PAAQILFVSS 180 (233)
T ss_dssp ---------------------EEEGGGTT----------------------CCTTSHHHHTHHHHHHTS-CGGGEEEEES
T ss_pred ---------------------EEEecccC----------------------CCCcCHHHHHHHHHHhCC-CcccEEEEeC
Confidence 11111000 000011111223333332 3467999999
Q ss_pred CcCCHHHhhhcccccccc---CCccchhccccceehhchhhhHHHH
Q 002029 648 GANDVGMLQEADIGVGIS---GVEGMQAVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 648 G~ND~~ml~~AdvGI~i~---g~e~~~a~~asD~vi~~f~~l~~ll 690 (978)
+.||+.|.+.|++++.+- +......+..+|+++.++..+..+|
T Consensus 181 ~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 181 NGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp CHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred CHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 999999999999998662 2222223457999999998888774
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.69 E-value=7.9e-05 Score=76.95 Aligned_cols=121 Identities=12% Similarity=0.076 Sum_probs=78.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCC---hhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDK---METAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 565 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~---~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (978)
.+.+++.+.++.|++.|+++.++|+.. ...+..+....|+...-..
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~------------------------------- 147 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDK------------------------------- 147 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSE-------------------------------
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhh-------------------------------
Confidence 458999999999999999999999998 7777777777776321111
Q ss_pred HHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHcc---CCCeE
Q 002029 566 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTT 642 (978)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~~~~v 642 (978)
++.+.... ...| |..+.+.+.+. ..+.+
T Consensus 148 -----------------------~~~~~~~~------------------------~~kp--~~~~~~~~~~~lgi~~~~~ 178 (235)
T 2om6_A 148 -----------------------TFFADEVL------------------------SYKP--RKEMFEKVLNSFEVKPEES 178 (235)
T ss_dssp -----------------------EEEHHHHT------------------------CCTT--CHHHHHHHHHHTTCCGGGE
T ss_pred -----------------------heeccccC------------------------CCCC--CHHHHHHHHHHcCCCccce
Confidence 11110000 0011 11222222221 34689
Q ss_pred EEEcCCc-CCHHHhhhcccccccc--CCccchhccccceehhchhhhHHH
Q 002029 643 LAIGDGA-NDVGMLQEADIGVGIS--GVEGMQAVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 643 ~aiGDG~-ND~~ml~~AdvGI~i~--g~e~~~a~~asD~vi~~f~~l~~l 689 (978)
++|||+. ||+.|.+.|++++.+- +......+..+|+++.++..+..+
T Consensus 179 ~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 228 (235)
T 2om6_A 179 LHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDV 228 (235)
T ss_dssp EEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHH
T ss_pred EEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHH
Confidence 9999999 9999999999998662 222222345689999888877666
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=97.67 E-value=4e-05 Score=81.36 Aligned_cols=40 Identities=33% Similarity=0.315 Sum_probs=34.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++.+++.+.++.|++.|+++.++|++....+..+....|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~ 142 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL 142 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 5689999999999999999999999998887777766665
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.67 E-value=5.1e-05 Score=79.22 Aligned_cols=137 Identities=13% Similarity=0.145 Sum_probs=86.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
-++.|++.++++.|+++|+++.++|+.....+..+.. |+... ..++.-+...
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~------------------------- 127 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASF------------------------- 127 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEEC-------------------------
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEE-------------------------
Confidence 3689999999999999999999999999988888777 66332 2222111100
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcC
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 647 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGD 647 (978)
.+..+..... +-....+.+.....|..+++.+.. ....+++|||
T Consensus 128 -----------------------~~~~~~~~~~------------kp~p~~~~~~~~~~K~~~~~~~~~-~~~~~~~vGD 171 (236)
T 2fea_A 128 -----------------------DNDYIHIDWP------------HSCKGTCSNQCGCCKPSVIHELSE-PNQYIIMIGD 171 (236)
T ss_dssp -----------------------SSSBCEEECT------------TCCCTTCCSCCSSCHHHHHHHHCC-TTCEEEEEEC
T ss_pred -----------------------cCCceEEecC------------CCCccccccccCCcHHHHHHHHhc-cCCeEEEEeC
Confidence 0000000000 000000111135578888888865 6678999999
Q ss_pred CcCCHHHhhhccccccccCCccchhcc--ccceehhchhhhHHH
Q 002029 648 GANDVGMLQEADIGVGISGVEGMQAVM--SSDIAIAQFRFLERL 689 (978)
Q Consensus 648 G~ND~~ml~~AdvGI~i~g~e~~~a~~--asD~vi~~f~~l~~l 689 (978)
+.+|+.|.+.|++.+...+.. ..... .+|+++.++..+..+
T Consensus 172 s~~Di~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~~el~~~ 214 (236)
T 2fea_A 172 SVTDVEAAKLSDLCFARDYLL-NECREQNLNHLPYQDFYEIRKE 214 (236)
T ss_dssp CGGGHHHHHTCSEEEECHHHH-HHHHHTTCCEECCSSHHHHHHH
T ss_pred ChHHHHHHHhCCeeeechHHH-HHHHHCCCCeeecCCHHHHHHH
Confidence 999999999999987532211 11222 278998888887766
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.63 E-value=4e-05 Score=78.43 Aligned_cols=47 Identities=6% Similarity=0.061 Sum_probs=37.5
Q ss_pred CCCeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhchhhh
Q 002029 638 TSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFL 686 (978)
Q Consensus 638 ~~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~~l 686 (978)
....+++|||+.||+.|++.|++++.+.+... ..+ .||+++.++..+
T Consensus 161 ~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~-~a~~v~~~~~el 207 (221)
T 2wf7_A 161 APSESIGLEDSQAGIQAIKDSGALPIGVGRPE-DLG-DDIVIVPDTSHY 207 (221)
T ss_dssp CGGGEEEEESSHHHHHHHHHHTCEEEEESCHH-HHC-SSSEEESSGGGC
T ss_pred ChhHeEEEeCCHHHHHHHHHCCCEEEEECCHH-Hhc-cccchhcCHHhC
Confidence 34679999999999999999999998755432 244 899999886664
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.63 E-value=7.4e-05 Score=77.26 Aligned_cols=41 Identities=24% Similarity=0.207 Sum_probs=36.5
Q ss_pred ccCCChHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQA-GIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~a-GIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+++.+.++.|++. |+++.++|+.....+..+....|+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 4789999999999999 9999999999998888888777763
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00011 Score=76.51 Aligned_cols=41 Identities=22% Similarity=0.143 Sum_probs=37.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 145 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLD 145 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcH
Confidence 57899999999999999999999999998888888888874
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00028 Score=72.94 Aligned_cols=122 Identities=19% Similarity=0.143 Sum_probs=81.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
-++.+++.++++.|++. +++.++|+.....+.......|+...-..
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 147 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKD--------------------------------- 147 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhhe---------------------------------
Confidence 35789999999999999 99999999998888888888776432111
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCC----CeEE
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS----STTL 643 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~----~~v~ 643 (978)
++.+.... ..+-|..+++.+.+..| ..++
T Consensus 148 ---------------------~~~~~~~~--------------------------~~kp~~~~~~~~~~~~g~~~~~~~i 180 (238)
T 3ed5_A 148 ---------------------IFVSEDTG--------------------------FQKPMKEYFNYVFERIPQFSAEHTL 180 (238)
T ss_dssp ---------------------EEEGGGTT--------------------------SCTTCHHHHHHHHHTSTTCCGGGEE
T ss_pred ---------------------EEEecccC--------------------------CCCCChHHHHHHHHHcCCCChhHeE
Confidence 11111000 01112233332222233 6799
Q ss_pred EEcCCc-CCHHHhhhccccc-cccC-CccchhccccceehhchhhhHHHH
Q 002029 644 AIGDGA-NDVGMLQEADIGV-GISG-VEGMQAVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 644 aiGDG~-ND~~ml~~AdvGI-~i~g-~e~~~a~~asD~vi~~f~~l~~ll 690 (978)
+|||+. ||+.|.+.|+++. .+.. ......+..+|+++.++..+..+|
T Consensus 181 ~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 181 IIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp EEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred EECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 999998 9999999999954 4422 212224567899999999888774
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00013 Score=76.60 Aligned_cols=41 Identities=22% Similarity=0.374 Sum_probs=35.9
Q ss_pred hHHHHHHHHHccCCCeEEEEcC----CcCCHHHhhhcc-ccccccCC
Q 002029 626 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEAD-IGVGISGV 667 (978)
Q Consensus 626 qK~~iV~~lk~~~~~~v~aiGD----G~ND~~ml~~Ad-vGI~i~g~ 667 (978)
.|+..++.+.+ ....|+|+|| |.||.+||+.|+ +|+++.+.
T Consensus 187 ~Kg~al~~L~~-~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~ 232 (246)
T 3f9r_A 187 DKTYCLQFVED-DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSY 232 (246)
T ss_dssp SGGGGGGGTTT-TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSH
T ss_pred CHHHHHHHHHc-CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCH
Confidence 79999999888 7789999999 799999999885 78888554
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.57 E-value=9e-05 Score=78.84 Aligned_cols=41 Identities=29% Similarity=0.165 Sum_probs=36.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~ 151 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ 151 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc
Confidence 57899999999999999999999999988888888777764
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=4.5e-05 Score=81.13 Aligned_cols=56 Identities=14% Similarity=0.249 Sum_probs=43.3
Q ss_pred hHHHHHHHHHccCCCeEEEEcC----CcCCHHHhhhcc-ccccccCCccchhccccceehhc
Q 002029 626 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 626 qK~~iV~~lk~~~~~~v~aiGD----G~ND~~ml~~Ad-vGI~i~g~e~~~a~~asD~vi~~ 682 (978)
.|+..++.+.......|+++|| |.||.+||+.|+ +|++|.+ .....+..||++...
T Consensus 197 sKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~N-A~~~~k~~a~~v~~~ 257 (262)
T 2fue_A 197 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS-PQDTVQRCREIFFPE 257 (262)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS-HHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecC-CCHHHHHhhheeCCC
Confidence 6999999882214478999999 999999999998 5999944 334477788887653
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00023 Score=74.15 Aligned_cols=41 Identities=15% Similarity=0.124 Sum_probs=36.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+++.++++.|++.|+++.++|+.....+..+....|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 47899999999999999999999999888888888888863
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=6.4e-05 Score=80.69 Aligned_cols=125 Identities=15% Similarity=0.065 Sum_probs=81.6
Q ss_pred ccCCChHHHHHHHHHcCC--eEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGI--KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 566 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGI--kv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (978)
++.+++.++++.|++.|+ +++++|+.....+..+.+.+|+...-..
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~-------------------------------- 189 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDG-------------------------------- 189 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSE--------------------------------
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccce--------------------------------
Confidence 567899999999999999 9999999999888888888887432111
Q ss_pred HHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHcc---CC-CeE
Q 002029 567 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TS-STT 642 (978)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~~-~~v 642 (978)
++.+.... . .. ..++-|..+++.+.+. .. +.|
T Consensus 190 ----------------------v~~~~~~~------------------~--~~--~~~Kp~~~~~~~~~~~lgi~~~~~~ 225 (282)
T 3nuq_A 190 ----------------------LTYCDYSR------------------T--DT--LVCKPHVKAFEKAMKESGLARYENA 225 (282)
T ss_dssp ----------------------EECCCCSS------------------C--SS--CCCTTSHHHHHHHHHHHTCCCGGGE
T ss_pred ----------------------EEEeccCC------------------C--cc--cCCCcCHHHHHHHHHHcCCCCcccE
Confidence 11110000 0 00 1122233333332222 34 689
Q ss_pred EEEcCCcCCHHHhhhccccccccCCccc-----hhccccceehhchhhhHHH
Q 002029 643 LAIGDGANDVGMLQEADIGVGISGVEGM-----QAVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 643 ~aiGDG~ND~~ml~~AdvGI~i~g~e~~-----~a~~asD~vi~~f~~l~~l 689 (978)
++|||+.||+.|.+.|++|+++....+. .....+|+++.++..|..+
T Consensus 226 i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 226 YFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp EEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred EEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 9999999999999999998765222211 1134789999998777655
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.55 E-value=8.9e-05 Score=76.72 Aligned_cols=41 Identities=20% Similarity=0.276 Sum_probs=37.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 135 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLR 135 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChH
Confidence 57899999999999999999999999988888888888874
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00019 Score=74.14 Aligned_cols=123 Identities=15% Similarity=0.165 Sum_probs=80.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.+++.+.++.|++. +++.++|+.....+..+....|+...-..
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~---------------------------------- 144 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDS---------------------------------- 144 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcce----------------------------------
Confidence 5679999999999999 99999999999888888888876432111
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCC
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 648 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG 648 (978)
++.+.... ...-.|.--..+.+.+.- ....+++|||+
T Consensus 145 --------------------~~~~~~~~----------------------~~kp~~~~~~~~~~~~~~-~~~~~~~vGD~ 181 (234)
T 3u26_A 145 --------------------ITTSEEAG----------------------FFKPHPRIFELALKKAGV-KGEEAVYVGDN 181 (234)
T ss_dssp --------------------EEEHHHHT----------------------BCTTSHHHHHHHHHHHTC-CGGGEEEEESC
T ss_pred --------------------eEeccccC----------------------CCCcCHHHHHHHHHHcCC-CchhEEEEcCC
Confidence 11110000 000111111223333332 34789999999
Q ss_pred c-CCHHHhhhccc---cccccCCccchhccccceehhchhhhHHHH
Q 002029 649 A-NDVGMLQEADI---GVGISGVEGMQAVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 649 ~-ND~~ml~~Adv---GI~i~g~e~~~a~~asD~vi~~f~~l~~ll 690 (978)
. ||+.|.+.|++ +|...+.. ...+..+|+++.++..+..+|
T Consensus 182 ~~~Di~~a~~aG~~~~~v~~~~~~-~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 182 PVKDCGGSKNLGMTSILLDRKGEK-REFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp TTTTHHHHHTTTCEEEEECSSSTT-GGGGGGCSEEESSTHHHHHHH
T ss_pred cHHHHHHHHHcCCEEEEECCCCCc-cccccCCCEeeCCHHHHHHHH
Confidence 7 99999999995 55543322 224558999999988877764
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00015 Score=74.06 Aligned_cols=118 Identities=14% Similarity=0.092 Sum_probs=79.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.||+.++++.|++ |+++.++|+.....+..+-+.+|+...-.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~----------------------------------- 127 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFD----------------------------------- 127 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhee-----------------------------------
Confidence 578999999999999 99999999998888888878888743211
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCC---CeEEEE
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAI 645 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~---~~v~ai 645 (978)
.++++.-.++-|..+.+.+.++.| +.+++|
T Consensus 128 -----------------------------------------------~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~v 160 (210)
T 2ah5_A 128 -----------------------------------------------GIYGSSPEAPHKADVIHQALQTHQLAPEQAIII 160 (210)
T ss_dssp -----------------------------------------------EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred -----------------------------------------------eeecCCCCCCCChHHHHHHHHHcCCCcccEEEE
Confidence 112222112334444444333333 679999
Q ss_pred cCCcCCHHHhhhccc---cccccCCccchhc-cccceehhchhhhHHH
Q 002029 646 GDGANDVGMLQEADI---GVGISGVEGMQAV-MSSDIAIAQFRFLERL 689 (978)
Q Consensus 646 GDG~ND~~ml~~Adv---GI~i~g~e~~~a~-~asD~vi~~f~~l~~l 689 (978)
||+.||+.|.++|++ +|..........+ ..+|+++.++..+..+
T Consensus 161 gDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~ 208 (210)
T 2ah5_A 161 GDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp ESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred CCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 999999999999998 4443222111122 3589999887766543
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00013 Score=72.50 Aligned_cols=53 Identities=17% Similarity=0.134 Sum_probs=38.2
Q ss_pred CCCeEEEEcCCcCCHHHhhhccc---cccccCCccchh----ccccceehhchhhhHHHHH
Q 002029 638 TSSTTLAIGDGANDVGMLQEADI---GVGISGVEGMQA----VMSSDIAIAQFRFLERLLL 691 (978)
Q Consensus 638 ~~~~v~aiGDG~ND~~ml~~Adv---GI~i~g~e~~~a----~~asD~vi~~f~~l~~lll 691 (978)
....+++|||+.||+.|.+.|++ +|.. |...... ...+|+++.++..+..+|+
T Consensus 117 ~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~-g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 117 DLAGVPAVGDSLRDLQAAAQAGCAPWLVQT-GNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp CCTTCEEEESSHHHHHHHHHHTCEEEEEST-TTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred CHHHEEEECCCHHHHHHHHHCCCcEEEECC-CCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 44679999999999999999996 4433 2211111 2457999999888877754
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.54 E-value=5.6e-05 Score=79.84 Aligned_cols=42 Identities=14% Similarity=0.066 Sum_probs=37.3
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
.-++.+++.++++.|++.|++++++|+.....+..+.+..|+
T Consensus 108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l 149 (259)
T 4eek_A 108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGL 149 (259)
T ss_dssp TCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred cCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcCh
Confidence 345789999999999999999999999999888888888776
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.50 E-value=4.1e-05 Score=77.92 Aligned_cols=39 Identities=13% Similarity=0.221 Sum_probs=35.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++.+++.+.++.|++. +++.++|+.....+..+.+.+|+
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l 121 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPF 121 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGG
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcCh
Confidence 5789999999999999 99999999998888888888776
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00018 Score=74.51 Aligned_cols=124 Identities=19% Similarity=0.176 Sum_probs=81.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.+++.++++.|+ .|+++.++|+.....+..+.+.+|+...-..
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~---------------------------------- 151 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKK---------------------------------- 151 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSE----------------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhcee----------------------------------
Confidence 57899999999999 9999999999988888888777776432111
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHcc---CCCeEEEE
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAI 645 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~~~~v~ai 645 (978)
++.+.... ..+-|..+++.+.+. ....+++|
T Consensus 152 --------------------~~~~~~~~--------------------------~~kp~~~~~~~~~~~lgi~~~~~~~i 185 (240)
T 3qnm_A 152 --------------------IILSEDLG--------------------------VLKPRPEIFHFALSATQSELRESLMI 185 (240)
T ss_dssp --------------------EEEGGGTT--------------------------CCTTSHHHHHHHHHHTTCCGGGEEEE
T ss_pred --------------------EEEeccCC--------------------------CCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 11111000 011122223322222 34689999
Q ss_pred cCCc-CCHHHhhhccccccccCCcc-chhccccceehhchhhhHHHHHHhhh
Q 002029 646 GDGA-NDVGMLQEADIGVGISGVEG-MQAVMSSDIAIAQFRFLERLLLVHGH 695 (978)
Q Consensus 646 GDG~-ND~~ml~~AdvGI~i~g~e~-~~a~~asD~vi~~f~~l~~lll~~gR 695 (978)
||+. ||+.|.+.|++++.+.+... ......+|+++.++..+..+ .+|+
T Consensus 186 GD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~--~~~~ 235 (240)
T 3qnm_A 186 GDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNL--LEGH 235 (240)
T ss_dssp ESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHH--TC--
T ss_pred CCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHH--Hhcc
Confidence 9995 99999999999986633322 12456789999998887765 4454
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.49 E-value=6.2e-05 Score=79.02 Aligned_cols=49 Identities=12% Similarity=0.125 Sum_probs=37.7
Q ss_pred CeEEEEcCCcCCHHHhhhccc---cccccCCccchhccccceehhchhhhHHH
Q 002029 640 STTLAIGDGANDVGMLQEADI---GVGISGVEGMQAVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 640 ~~v~aiGDG~ND~~ml~~Adv---GI~i~g~e~~~a~~asD~vi~~f~~l~~l 689 (978)
..+++|||+.||+.|.+.|++ +|...+.. ...+..+|+++.++..+...
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~-~~~~~~ad~v~~sl~el~~~ 242 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDGNLS-RDLTTKATLVLNSLQDFQPE 242 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCTTSC-GGGSTTSSEECSCGGGCCGG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCc-hhhcccccEeecCHHHhhHH
Confidence 789999999999999999995 45443322 23567899999998776554
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00013 Score=76.19 Aligned_cols=40 Identities=18% Similarity=0.249 Sum_probs=31.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
.++.+++.++++.|++.|+++.++|+.....+...... |+
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l 146 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NF 146 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hH
Confidence 46789999999999999999999999887766665555 65
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00022 Score=74.36 Aligned_cols=40 Identities=20% Similarity=0.156 Sum_probs=35.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++.+++.++++.|++.|+++.++|+.....+..+...+|+
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l 149 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFP 149 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHST
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4679999999999999999999999988888777777776
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00013 Score=76.08 Aligned_cols=40 Identities=18% Similarity=0.174 Sum_probs=33.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
-++.+++.+.++.|++.|+++.++|+.....+...... |+
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l 147 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NF 147 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hH
Confidence 46789999999999999999999999887766655555 55
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0002 Score=75.20 Aligned_cols=53 Identities=21% Similarity=0.307 Sum_probs=39.6
Q ss_pred hHHHHHHHHHccCCCeEEEEcC----CcCCHHHhhhccc-cccccCCccchhcccccee
Q 002029 626 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEADI-GVGISGVEGMQAVMSSDIA 679 (978)
Q Consensus 626 qK~~iV~~lk~~~~~~v~aiGD----G~ND~~ml~~Adv-GI~i~g~e~~~a~~asD~v 679 (978)
.|+..++.+.....+.|+++|| |.||.+||+.|+. |++|.+... ..+..||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~-~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPED-TRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHH-HHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCH-HHHHHHhhc
Confidence 6998888882214478999999 9999999999977 999855433 377888876
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00051 Score=72.18 Aligned_cols=39 Identities=15% Similarity=0.199 Sum_probs=35.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+++.++++.|+ |+++.++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~ 131 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT 131 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch
Confidence 67899999999999 9999999999999888888888864
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00045 Score=70.66 Aligned_cols=53 Identities=19% Similarity=0.260 Sum_probs=37.0
Q ss_pred CCCeEEEEcCCcCCHHHhhhcccc--cccc-CCccch-hccccceehhchhhhHHHH
Q 002029 638 TSSTTLAIGDGANDVGMLQEADIG--VGIS-GVEGMQ-AVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 638 ~~~~v~aiGDG~ND~~ml~~AdvG--I~i~-g~e~~~-a~~asD~vi~~f~~l~~ll 690 (978)
....+++|||+.||+.|.+.|++. |++. |..... ....+|+++.++..+..++
T Consensus 147 ~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~l 203 (211)
T 2gmw_A 147 DMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAI 203 (211)
T ss_dssp CGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred CHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHHH
Confidence 346789999999999999999965 4442 221111 1235899998888777663
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00045 Score=69.08 Aligned_cols=41 Identities=22% Similarity=0.259 Sum_probs=37.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCC-hhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDK-METAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~-~~tA~~ia~~~gl~ 529 (978)
++.+++.++|+.|++.|+++.++||.. ...+..+.+.+|+.
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 678999999999999999999999998 68888888888873
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00051 Score=70.88 Aligned_cols=53 Identities=8% Similarity=-0.049 Sum_probs=40.1
Q ss_pred CCCeEEEEcCCc-CCHHHhhhccccccccCCc----------cchhccccceehhchhhhHHHH
Q 002029 638 TSSTTLAIGDGA-NDVGMLQEADIGVGISGVE----------GMQAVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 638 ~~~~v~aiGDG~-ND~~ml~~AdvGI~i~g~e----------~~~a~~asD~vi~~f~~l~~ll 690 (978)
....+++|||+. ||+.|.+.|++++.+-... .......+|+++.++..+..+|
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l 234 (240)
T 3smv_A 171 EKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAH 234 (240)
T ss_dssp CGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHH
T ss_pred CchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHH
Confidence 346899999996 9999999999998663221 1113468999999988877664
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.002 Score=67.41 Aligned_cols=39 Identities=18% Similarity=0.164 Sum_probs=33.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++.+++.++++.|+ .|+++.++|+.....+.......|+
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l 150 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGL 150 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSG
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCc
Confidence 56899999999999 9999999999988877777766665
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0006 Score=71.13 Aligned_cols=121 Identities=9% Similarity=0.033 Sum_probs=81.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.+++.++++.|++. +++.++|+.....+..+...+|+.- +.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f--------~~---------------------------- 158 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPW--------DV---------------------------- 158 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCC--------SC----------------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCe--------eE----------------------------
Confidence 5689999999999997 9999999999888888888877620 00
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHcc---CCCeEEEE
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAI 645 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~~~~v~ai 645 (978)
++.+.. +....| |..+++.+.+. ....+++|
T Consensus 159 --------------------~~~~~~------------------------~~~~kp--~~~~~~~~~~~lgi~~~~~~~i 192 (254)
T 3umg_A 159 --------------------IIGSDI------------------------NRKYKP--DPQAYLRTAQVLGLHPGEVMLA 192 (254)
T ss_dssp --------------------CCCHHH------------------------HTCCTT--SHHHHHHHHHHTTCCGGGEEEE
T ss_pred --------------------EEEcCc------------------------CCCCCC--CHHHHHHHHHHcCCChHHEEEE
Confidence 000000 000112 22233332222 33689999
Q ss_pred cCCcCCHHHhhhccccccccCCc---cc----h--hccccceehhchhhhHHHHHH
Q 002029 646 GDGANDVGMLQEADIGVGISGVE---GM----Q--AVMSSDIAIAQFRFLERLLLV 692 (978)
Q Consensus 646 GDG~ND~~ml~~AdvGI~i~g~e---~~----~--a~~asD~vi~~f~~l~~lll~ 692 (978)
||+.||+.|.+.|++++.+-... +. . ....+|+++.++..+..+|..
T Consensus 193 GD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 193 AAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRA 248 (254)
T ss_dssp ESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHH
T ss_pred eCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcC
Confidence 99999999999999998663311 10 0 245789999999988887533
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00065 Score=68.49 Aligned_cols=40 Identities=10% Similarity=0.113 Sum_probs=35.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
-++.+++.+ ++.|++. +++.++|+.....+..+...+|+.
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~ 112 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLL 112 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCG
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcH
Confidence 367899999 9999999 999999999988888888888874
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00052 Score=72.73 Aligned_cols=124 Identities=11% Similarity=0.072 Sum_probs=79.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.+++.++++.|++.|+++.++|+.... +..+.+.+|+...-..
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~---------------------------------- 150 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDF---------------------------------- 150 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSC----------------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhE----------------------------------
Confidence 47899999999999999999999996654 5667777776331111
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCC
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 648 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG 648 (978)
++.+... -...-.|+--..+.+.+.- ....+++|||+
T Consensus 151 --------------------~~~~~~~----------------------~~~Kp~~~~~~~~~~~~g~-~~~~~~~vGD~ 187 (263)
T 3k1z_A 151 --------------------VLTSEAA----------------------GWPKPDPRIFQEALRLAHM-EPVVAAHVGDN 187 (263)
T ss_dssp --------------------EEEHHHH----------------------SSCTTSHHHHHHHHHHHTC-CGGGEEEEESC
T ss_pred --------------------EEeeccc----------------------CCCCCCHHHHHHHHHHcCC-CHHHEEEECCC
Confidence 1111000 0011112222233344432 44789999999
Q ss_pred c-CCHHHhhhccccccccCCccc--h---hccccceehhchhhhHHHH
Q 002029 649 A-NDVGMLQEADIGVGISGVEGM--Q---AVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 649 ~-ND~~ml~~AdvGI~i~g~e~~--~---a~~asD~vi~~f~~l~~ll 690 (978)
. ||+.|.+.|++++.+-..... . ....+|+++.++..+..+|
T Consensus 188 ~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 188 YLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp HHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred cHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHH
Confidence 7 999999999999865322211 0 1126899999988887775
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00075 Score=69.25 Aligned_cols=52 Identities=12% Similarity=0.284 Sum_probs=38.9
Q ss_pred CCCeEEEEcCCcCCHHHhhhcccc-ccccCCccc------hhccc-cceehhchhhhHHH
Q 002029 638 TSSTTLAIGDGANDVGMLQEADIG-VGISGVEGM------QAVMS-SDIAIAQFRFLERL 689 (978)
Q Consensus 638 ~~~~v~aiGDG~ND~~ml~~AdvG-I~i~g~e~~------~a~~a-sD~vi~~f~~l~~l 689 (978)
....+++|||+.||+.|.+.|+++ |++...... ..+.. +|+++.++..+..+
T Consensus 159 ~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~ 218 (229)
T 2fdr_A 159 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAV 218 (229)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHH
T ss_pred ChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHH
Confidence 346799999999999999999998 566443221 13444 89999988777665
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00043 Score=74.52 Aligned_cols=65 Identities=22% Similarity=0.220 Sum_probs=47.9
Q ss_pred EEeCCc--hhHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhchh
Q 002029 619 CCRSSP--KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 684 (978)
Q Consensus 619 ~~r~sP--~qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~ 684 (978)
+....| ..|...++.+.+..| ..++++||+.||.+|++.|++|+++.+.. ...+..||+++.+..
T Consensus 202 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~-~~~~~~a~~v~~~~~ 271 (289)
T 3gyg_A 202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNAT-QEAKNLHNLITDSEY 271 (289)
T ss_dssp EEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCC-HHHHHHCCCBCSSCH
T ss_pred EEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCcc-HHHHHhCCEEcCCCC
Confidence 344444 367777776665433 57999999999999999999999985543 336778899887643
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00057 Score=70.20 Aligned_cols=52 Identities=12% Similarity=0.050 Sum_probs=36.3
Q ss_pred CCeEEEEcCCcCCHHHhhhccccc--ccc-CCccc-hhccccceehhchhhhHHHH
Q 002029 639 SSTTLAIGDGANDVGMLQEADIGV--GIS-GVEGM-QAVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 639 ~~~v~aiGDG~ND~~ml~~AdvGI--~i~-g~e~~-~a~~asD~vi~~f~~l~~ll 690 (978)
...++||||+.||+.|.+.|++.. .+. |.... .....+|+++.++..+..++
T Consensus 154 ~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~~l 209 (218)
T 2o2x_A 154 LQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAI 209 (218)
T ss_dssp GGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHHH
T ss_pred HHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHHHH
Confidence 467999999999999999999764 332 22111 12245788888887776664
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0048 Score=61.59 Aligned_cols=41 Identities=20% Similarity=0.288 Sum_probs=36.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCCh---hhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKM---ETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~---~tA~~ia~~~gl~ 529 (978)
++.+|+.++++.|+++|+++.++|+... ..+..+.+..|+.
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 6889999999999999999999998776 7888888888874
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00076 Score=71.96 Aligned_cols=40 Identities=15% Similarity=-0.070 Sum_probs=35.2
Q ss_pred ccCCChHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQA-GIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~a-GIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++.+++.+.++.|++. |+++.++|+.....+..+.+..|+
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l 154 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKI 154 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 4679999999999999 999999999998888777777765
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.00055 Score=71.64 Aligned_cols=119 Identities=11% Similarity=0.029 Sum_probs=79.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.+++.++++.|++. +++.++|+.....+..+...+|+. -..
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~---f~~--------------------------------- 162 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP---WDM--------------------------------- 162 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC---CSE---------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC---cce---------------------------------
Confidence 5679999999999985 999999999988888888877762 000
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHcc---CCCeEEEE
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAI 645 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~~~~v~ai 645 (978)
++.+... . ...-|..+++.+.+. ....|++|
T Consensus 163 --------------------~~~~~~~------------------------~--~~kp~~~~~~~~~~~lgi~~~~~~~i 196 (254)
T 3umc_A 163 --------------------LLCADLF------------------------G--HYKPDPQVYLGACRLLDLPPQEVMLC 196 (254)
T ss_dssp --------------------ECCHHHH------------------------T--CCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred --------------------EEeeccc------------------------c--cCCCCHHHHHHHHHHcCCChHHEEEE
Confidence 0000000 0 011222333322222 34679999
Q ss_pred cCCcCCHHHhhhccccccccCC---ccc----h--hccccceehhchhhhHHHH
Q 002029 646 GDGANDVGMLQEADIGVGISGV---EGM----Q--AVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 646 GDG~ND~~ml~~AdvGI~i~g~---e~~----~--a~~asD~vi~~f~~l~~ll 690 (978)
||+.||+.|.+.|++++.+-.. .+. . .+..+|+++.++..|..+|
T Consensus 197 GD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 197 AAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp ESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred cCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 9999999999999999866331 111 1 1457899999988887763
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.00099 Score=66.21 Aligned_cols=38 Identities=16% Similarity=0.314 Sum_probs=31.6
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
+.+++.+.++.|++.|++++++|+... .+..+....|+
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~ 120 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSI 120 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCC
Confidence 689999999999999999999998864 45566666665
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.041 Score=57.59 Aligned_cols=39 Identities=13% Similarity=0.128 Sum_probs=34.8
Q ss_pred cCCChHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCc
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSL 528 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlT---GD~~~tA~~ia~~~gl 528 (978)
+-+++.++++.+++.|+++.++| |...........+.|+
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~ 74 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGF 74 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCC
Confidence 66889999999999999999999 9998888888888776
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.55 E-value=0.014 Score=61.48 Aligned_cols=42 Identities=10% Similarity=0.098 Sum_probs=34.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcC---CChhhHHHHHHHcCcc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTG---DKMETAINIGFACSLL 529 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTG---D~~~tA~~ia~~~gl~ 529 (978)
+.+-+++.++|++|+++|++++++|| +..........++|+.
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 34446799999999999999999998 6666667777788874
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0016 Score=65.40 Aligned_cols=40 Identities=13% Similarity=0.008 Sum_probs=35.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+++.+.++.|++.| +++++|+.....+..+...+|+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 47799999999999999 99999999988888888887763
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0045 Score=63.41 Aligned_cols=53 Identities=21% Similarity=0.240 Sum_probs=39.3
Q ss_pred CCCeEEEEcCCc-CCHHHhhhccccccc-c-CCccchhccccceehhchhhhHHHH
Q 002029 638 TSSTTLAIGDGA-NDVGMLQEADIGVGI-S-GVEGMQAVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 638 ~~~~v~aiGDG~-ND~~ml~~AdvGI~i-~-g~e~~~a~~asD~vi~~f~~l~~ll 690 (978)
....+++|||+. ||+.|.+.|++++.+ . +.........+|+++.++..+..+|
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 171 DASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp CGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred CchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 346899999998 999999999998744 1 2211112457899999988887764
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.001 Score=62.17 Aligned_cols=41 Identities=12% Similarity=0.004 Sum_probs=35.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
.++.|++.++++.|+++|+++.++|+.....+..+.+.+|+
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l 57 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELET 57 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCCh
Confidence 34678899999999999999999999988887777777665
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0072 Score=63.73 Aligned_cols=40 Identities=23% Similarity=0.290 Sum_probs=35.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.||+.++++.|++ |+++.++|+.....+..+...+|+.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~ 160 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQ 160 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHH
Confidence 577999999999998 6999999999998888888888874
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.011 Score=60.04 Aligned_cols=42 Identities=24% Similarity=0.192 Sum_probs=38.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 530 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~ 530 (978)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~ 125 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc
Confidence 467999999999999999999999999999999999888753
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.14 E-value=0.0018 Score=65.52 Aligned_cols=36 Identities=14% Similarity=0.096 Sum_probs=30.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 525 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~ 525 (978)
++.+++.++++.|++ |++++++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 467899999999999 999999999887776666555
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=96.14 E-value=0.018 Score=57.02 Aligned_cols=39 Identities=15% Similarity=0.275 Sum_probs=24.3
Q ss_pred EEEeCCchHHHHHhcccchhhHHHHHHHHHHHHHccceeEeeE
Q 002029 394 LLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILA 436 (978)
Q Consensus 394 l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~A 436 (978)
.+.-|..+.|-+. +-...+.....+.++..+|..++.+|
T Consensus 133 ~v~iGn~~~m~~~----gi~i~~~~~~~~~~~~~~G~T~V~va 171 (185)
T 2kmv_A 133 KVLIGNREWMIRN----GLVINNDVNDFMTEHERKGRTAVLVA 171 (185)
T ss_dssp EEEEECHHHHHHH----TCCCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEECCHHHHHHc----CCCCCHHHHHHHHHHHhCCCeEEEEE
Confidence 3445887766432 11122344556777888999999998
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.011 Score=59.31 Aligned_cols=35 Identities=11% Similarity=0.167 Sum_probs=30.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG 523 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia 523 (978)
++.+|+.++++.|+++|+++.++||.....+..+.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc
Confidence 57899999999999999999999998877664433
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.09 E-value=0.018 Score=60.68 Aligned_cols=44 Identities=14% Similarity=0.015 Sum_probs=35.9
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcC---CChhhHHHHHHHcCccc
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTG---DKMETAINIGFACSLLR 530 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTG---D~~~tA~~ia~~~gl~~ 530 (978)
.+++-+++.++|++|+++|++++++|| +...........+|+..
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~ 68 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEV 68 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCC
Confidence 455667899999999999999999999 66666667777788743
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=95.86 E-value=0.031 Score=57.55 Aligned_cols=41 Identities=17% Similarity=0.203 Sum_probs=31.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSL 528 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlT---GD~~~tA~~ia~~~gl 528 (978)
++.-+.+.++++.|++.|++++.+| |.............|+
T Consensus 18 ~~~~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~ 61 (250)
T 2c4n_A 18 NVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGV 61 (250)
T ss_dssp TEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTC
T ss_pred CEeCcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCC
Confidence 3444555889999999999999999 8877777666666665
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=95.76 E-value=0.06 Score=56.71 Aligned_cols=42 Identities=14% Similarity=0.103 Sum_probs=37.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCcc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSLL 529 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlT---GD~~~tA~~ia~~~gl~ 529 (978)
.++-+++.++|++|+++|++++++| |+.........+.+|+-
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5677899999999999999999999 88888888888888874
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=95.61 E-value=0.0013 Score=66.27 Aligned_cols=31 Identities=23% Similarity=0.284 Sum_probs=26.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETA 519 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA 519 (978)
++.+++.++++.|++.|++++++|+.....+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~ 121 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHT 121 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHH
Confidence 5789999999999999999999999765543
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.42 E-value=0.024 Score=61.61 Aligned_cols=42 Identities=19% Similarity=0.283 Sum_probs=37.9
Q ss_pred eeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 002029 485 AVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 526 (978)
Q Consensus 485 ~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~ 526 (978)
.+...+.++..+.++.|+++|++||++||-..+.+..+|...
T Consensus 139 ~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 139 VEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp ECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 344468899999999999999999999999999999999885
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=95.37 E-value=0.042 Score=57.82 Aligned_cols=41 Identities=15% Similarity=0.207 Sum_probs=35.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCccc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSLLR 530 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlT---GD~~~tA~~ia~~~gl~~ 530 (978)
.+ +++.++|++++++|++++++| |+.........+++|+..
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 34 899999999999999999999 888888888888888843
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.36 E-value=0.026 Score=58.89 Aligned_cols=43 Identities=7% Similarity=0.099 Sum_probs=35.6
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChh----hHHHHHHHcCcc
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKME----TAINIGFACSLL 529 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~----tA~~ia~~~gl~ 529 (978)
+.++.|++.+.++.|+++|+++.++||.... .+..-.++.||-
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT 145 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcC
Confidence 4688999999999999999999999999764 555556667763
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=95.36 E-value=0.018 Score=60.10 Aligned_cols=118 Identities=14% Similarity=0.236 Sum_probs=75.3
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHH
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 566 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (978)
..++.|++.+.++.|++.|+++.+.|+.. .+..+-+.+|+...-..
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~-------------------------------- 159 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDF-------------------------------- 159 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSE--------------------------------
T ss_pred ccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccce--------------------------------
Confidence 34678999999999999999999877653 45566677777432111
Q ss_pred HHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEc
Q 002029 567 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 646 (978)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiG 646 (978)
++.+.... ...-.|+-=..+.+.+.- ..+.+++||
T Consensus 160 ----------------------i~~~~~~~----------------------~~KP~p~~~~~a~~~lg~-~p~e~l~VG 194 (250)
T 4gib_A 160 ----------------------IADAGKCK----------------------NNKPHPEIFLMSAKGLNV-NPQNCIGIE 194 (250)
T ss_dssp ----------------------ECCGGGCC----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEE
T ss_pred ----------------------eecccccC----------------------CCCCcHHHHHHHHHHhCC-ChHHeEEEC
Confidence 11111110 011112222233344432 446799999
Q ss_pred CCcCCHHHhhhccc-cccccCCccchhccccceehhchhhh
Q 002029 647 DGANDVGMLQEADI-GVGISGVEGMQAVMSSDIAIAQFRFL 686 (978)
Q Consensus 647 DG~ND~~ml~~Adv-GI~i~g~e~~~a~~asD~vi~~f~~l 686 (978)
|+.+|+.+-++|++ .|++.+.+. ...||+++.++..|
T Consensus 195 Ds~~Di~aA~~aG~~~i~v~~~~~---~~~ad~vi~~l~eL 232 (250)
T 4gib_A 195 DASAGIDAINSANMFSVGVGNYEN---LKKANLVVDSTNQL 232 (250)
T ss_dssp SSHHHHHHHHHTTCEEEEESCTTT---TTTSSEEESSGGGC
T ss_pred CCHHHHHHHHHcCCEEEEECChhH---hccCCEEECChHhC
Confidence 99999999999997 457744433 34689999987765
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=95.24 E-value=0.012 Score=53.27 Aligned_cols=45 Identities=11% Similarity=0.107 Sum_probs=38.0
Q ss_pred EEEEEEC-----CccccC--CcCceeecCceeccCCeEEEEEEEeCccchhcc
Q 002029 27 VGSLELE-----EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ 72 (978)
Q Consensus 27 ~G~~~~~-----~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~ 72 (978)
+|...+| ||+.|+ .+++.+|+||.+.+ |.+.++|++||.+|.+.+
T Consensus 52 ~g~~~vdeS~LTGEs~pv~k~~g~~v~aGt~~~~-G~~~~~V~~~g~~T~~~~ 103 (113)
T 2hc8_A 52 EGESYVDESMISGEPVPVLKSKGDEVFGATINNT-GVLKIRATRVGGETLLAQ 103 (113)
T ss_dssp ECCEEEECHHHHCCSSCEEECTTCEECTTCEECS-SCEEEEEEECGGGSHHHH
T ss_pred EceEEEEccccCCCCccEEECCCCEEEeCCEEee-ceEEEEEEEecCcCHHHH
Confidence 4555554 899887 77899999999997 999999999999997643
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=95.13 E-value=0.022 Score=63.34 Aligned_cols=42 Identities=21% Similarity=0.194 Sum_probs=38.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 530 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~ 530 (978)
++.||+.++++.|+++|+++.++|+.....+..+-...|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 577899999999999999999999999999888888888753
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=94.99 E-value=0.03 Score=57.02 Aligned_cols=40 Identities=18% Similarity=0.141 Sum_probs=33.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+++.++++.|+++|+++.++|+.... +..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHhcCcH
Confidence 57899999999999999999999998664 66677777763
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=94.71 E-value=0.014 Score=57.56 Aligned_cols=40 Identities=25% Similarity=0.277 Sum_probs=33.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC---------------ChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGD---------------KMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD---------------~~~tA~~ia~~~gl 528 (978)
++.|++.++++.|+++|+++.++|+- ....+..+.+..|+
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 96 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGV 96 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCC
Confidence 57899999999999999999999997 45566667777776
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=94.57 E-value=0.024 Score=61.07 Aligned_cols=33 Identities=24% Similarity=0.252 Sum_probs=29.1
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhH
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETA 519 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA 519 (978)
++++.+|+.++++.|+++|+++.++||.....+
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~ 218 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGTK 218 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCS
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCcccc
Confidence 567889999999999999999999999986543
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=94.52 E-value=0.037 Score=57.74 Aligned_cols=43 Identities=14% Similarity=0.063 Sum_probs=35.1
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChh----hHHHHHHHcCcc
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKME----TAINIGFACSLL 529 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~----tA~~ia~~~gl~ 529 (978)
++++.||+.+.++.|+++|+++.++||.... .+..-.++.||.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 5688999999999999999999999999763 455555566763
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=94.49 E-value=0.015 Score=59.75 Aligned_cols=34 Identities=9% Similarity=0.015 Sum_probs=29.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG 523 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia 523 (978)
++.+++.++++.|++. +++.++|+.....+..+.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~ 145 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVC 145 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHH
Confidence 4668999999999999 999999999988877665
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=94.32 E-value=0.43 Score=49.39 Aligned_cols=63 Identities=13% Similarity=0.069 Sum_probs=41.0
Q ss_pred HHHHHHHHHccCC---CeEEEEcCCc-CCHHHhhhccccc-cc-cCCc-cchh---ccccceehhchhhhHHH
Q 002029 627 KALVTRLVKTKTS---STTLAIGDGA-NDVGMLQEADIGV-GI-SGVE-GMQA---VMSSDIAIAQFRFLERL 689 (978)
Q Consensus 627 K~~iV~~lk~~~~---~~v~aiGDG~-ND~~ml~~AdvGI-~i-~g~e-~~~a---~~asD~vi~~f~~l~~l 689 (978)
|..+.+.+.+..| ..+++|||+. ||+.|.+.|++-. .+ .|.. ..+. ...+|+++.++..+..+
T Consensus 181 ~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~ 253 (259)
T 2ho4_A 181 EKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDH 253 (259)
T ss_dssp SHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHH
T ss_pred CHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHH
Confidence 4455555444333 6799999998 9999999998754 33 2211 1111 24578998888777665
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=94.03 E-value=0.058 Score=56.61 Aligned_cols=43 Identities=12% Similarity=0.142 Sum_probs=33.4
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhH---HHHHHHcCcc
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETA---INIGFACSLL 529 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA---~~ia~~~gl~ 529 (978)
+.++-|++.++|+.|++.|+++.++||...... ...-..+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 357889999999999999999999999985443 3333555653
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=93.94 E-value=0.093 Score=53.75 Aligned_cols=40 Identities=13% Similarity=0.139 Sum_probs=35.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
-++.||+.++++.|++.| ++.++|+.....+..+.+.+|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 368999999999999999 9999999988888888887776
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=93.41 E-value=0.2 Score=53.80 Aligned_cols=43 Identities=16% Similarity=0.145 Sum_probs=35.0
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCcc
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSLL 529 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlT---GD~~~tA~~ia~~~gl~ 529 (978)
.+++-+++.++++.|+++|++++++| |..........+.+|+-
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 56777899999999999999999999 56666666666677763
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.34 E-value=0.022 Score=52.45 Aligned_cols=37 Identities=19% Similarity=0.296 Sum_probs=33.7
Q ss_pred CccccC--CcCceeecCceeccCCeEEEEEEEeCccchhc
Q 002029 34 EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVF 71 (978)
Q Consensus 34 ~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~ 71 (978)
||+.|+ .+++.+|+||.+.+ |.+.+.|+.||.+|.+.
T Consensus 76 GEs~pv~k~~g~~v~aGt~~~~-G~~~~~v~~~g~~T~~~ 114 (124)
T 2kij_A 76 GEAMPVAKKPGSTVIAGSINQN-GSLLICATHVGADTTLS 114 (124)
T ss_dssp CCSSCEECCTTEEECTTCEEES-SCCEEEECSCTTTCHHH
T ss_pred CCCccEEeCCCCEEEcCCEEee-eEEEEEEEEecccCHHH
Confidence 888887 77899999999997 99999999999999764
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=92.52 E-value=0.18 Score=52.89 Aligned_cols=38 Identities=16% Similarity=0.230 Sum_probs=32.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 525 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~ 525 (978)
-++.|++.++++.|+++|+++.++|+-....+..+-+.
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~ 166 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH 166 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHh
Confidence 46889999999999999999999999988877666553
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=89.40 E-value=0.51 Score=48.65 Aligned_cols=40 Identities=18% Similarity=0.094 Sum_probs=32.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
.++.|++.+.++.|++.|+++.++|+... +..+-...|+.
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~ 133 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELR 133 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCG
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhc
Confidence 46789999999999999999999998653 44455666764
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=89.24 E-value=1.9 Score=41.50 Aligned_cols=35 Identities=9% Similarity=0.172 Sum_probs=21.5
Q ss_pred CCchHHHHHhcccchhhHHHHHHHHHHHHHccceeEeeE
Q 002029 398 GADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILA 436 (978)
Q Consensus 398 Ga~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~A 436 (978)
|....|-+.-- ...+.....+..+..+|..++.+|
T Consensus 118 Gn~~~m~~~gi----~~~~~~~~~~~~~~~~G~T~v~va 152 (165)
T 2arf_A 118 GNREWLRRNGL----TISSDVSDAMTDHEMKGQTAILVA 152 (165)
T ss_dssp ECHHHHHHHHC----SSCHHHHHHHHHHHTTTSEEEEEE
T ss_pred cCHHHHHhcCC----CCCHHHHHHHHHHHhCCCeEEEEE
Confidence 88776643211 112234455667788999889888
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=89.12 E-value=0.19 Score=50.95 Aligned_cols=30 Identities=17% Similarity=0.228 Sum_probs=26.0
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhH
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKMETA 519 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA 519 (978)
+.+++.++++.|+++|+++.++||.....+
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~ 118 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKT 118 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSS
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHH
Confidence 467899999999999999999999875533
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=86.08 E-value=0.24 Score=53.09 Aligned_cols=36 Identities=25% Similarity=0.284 Sum_probs=27.6
Q ss_pred ccCCCcccccCccccccc---------ccceEEEeeCCcccccCee
Q 002029 189 EETDKPARARTSNLNEEL---------GQVDTILSDKTGTLTCNSM 225 (978)
Q Consensus 189 ~~~~~~~~~r~~~~~e~L---------g~v~~I~sDKTGTLT~n~m 225 (978)
+-.+.++++|++..+|++ .++. |+||||||||+...
T Consensus 15 ~l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~ 59 (297)
T 4fe3_A 15 EFQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSY 59 (297)
T ss_dssp GGTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEE
T ss_pred HHhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeecc
Confidence 337889999999998873 3344 67799999998653
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=85.90 E-value=3.4 Score=42.69 Aligned_cols=42 Identities=5% Similarity=0.147 Sum_probs=34.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH----cCcc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA----CSLL 529 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~----~gl~ 529 (978)
++.-+++.++++.+++.|+++.++||....+...++.. +|+-
T Consensus 20 ~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 20 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 44446888999999999999999999998877777665 6663
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=84.90 E-value=0.91 Score=42.50 Aligned_cols=39 Identities=21% Similarity=0.091 Sum_probs=33.2
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCC---hhhHHHHHHHcCc
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDK---METAINIGFACSL 528 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~---~~tA~~ia~~~gl 528 (978)
+-+++.++|++|+++|++++++||+. ...+.....+.|+
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi 66 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGL 66 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCC
Confidence 45789999999999999999999997 5666677777776
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 978 | ||||
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 3e-30 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 3e-20 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 2e-14 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 5e-07 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 5e-06 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 9e-04 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 9e-04 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 0.001 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 0.002 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 0.002 |
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 117 bits (294), Expect = 3e-30
Identities = 39/230 (16%), Positives = 70/230 (30%), Gaps = 35/230 (15%)
Query: 272 GFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFV 331
+ E E + N + D + + + A+C+ + + +E G E A
Sbjct: 28 TYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEK-VGEATETALT 86
Query: 332 IAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGT 391
++ E ++S E + + + LEFS RK MSV + +
Sbjct: 87 TLVEKMNVFNTEV--RNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSS 144
Query: 392 -----LLLLSKGADSVMFER-----LAENGREFEEQTKEHINE------YADAGLRTLIL 435
+ KGA + +R + KE I LR L L
Sbjct: 145 RAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLAL 204
Query: 436 AYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATA 485
A R+ K + ++ + E +L +G
Sbjct: 205 ATRDTPPKREEMVLDD----------------SSRFMEYETDLTFVGVVG 238
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 88.0 bits (217), Expect = 3e-20
Identities = 31/214 (14%), Positives = 66/214 (30%), Gaps = 46/214 (21%)
Query: 288 EPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE--SPDEAAFVIAARELGFEFYERT 345
+ + R+ +C+ A+ + +EN +S E+A +
Sbjct: 28 DKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSV---- 83
Query: 346 QTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE--EGTLLLLSKGADSVM 403
K+ + + F+S+ K I E + +L+ KGA +
Sbjct: 84 --------------RKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERI 129
Query: 404 FERLA---------ENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTE 454
+R + +E ++ + E G R L L ++ + +
Sbjct: 130 LDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKF--- 186
Query: 455 AKNSVSADREELAEEIAEKIEKNLILLGATAVED 488
D +EL + L +G ++ D
Sbjct: 187 -------DTDEL-----NFPTEKLCFVGLMSMID 208
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 74.1 bits (181), Expect = 2e-14
Identities = 38/352 (10%), Positives = 81/352 (23%), Gaps = 91/352 (25%)
Query: 349 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLA 408
+ E + + + + L + + + + L + A + + A
Sbjct: 105 MYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHVSDA 164
Query: 409 ENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAE 468
K + A + L + ++ E K F
Sbjct: 165 T-----LFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTF---------------- 203
Query: 469 EIAEKIEKNLILLGATAVEDKLQN--GVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 526
G E L+ V ++ L AG +L + TG +
Sbjct: 204 -----------KTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENL 252
Query: 527 SLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPL 586
LL I ++ ++ + + + P
Sbjct: 253 GLLPYFEADFIATA--------------------------SDVLEAENMYPQARPLGKPN 286
Query: 587 ALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 646
A++ + + + +G
Sbjct: 287 PFSY-----------------------IAALYGNNRDKYESYINKQDNIVNK-DDVFIVG 322
Query: 647 DGANDVGMLQEAD---IGV--GISGVEGMQAVMSS--DIAIAQFRFLERLLL 691
D D+ Q+ IG G+ G + + + D I L +L
Sbjct: 323 DSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLD 374
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 48.6 bits (115), Expect = 5e-07
Identities = 38/209 (18%), Positives = 61/209 (29%), Gaps = 58/209 (27%)
Query: 477 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQV 536
+ T D + V I AGI++ ++TGD TAI I R++
Sbjct: 8 DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC----------RRI 57
Query: 537 IISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLT 596
I E E + ++ T
Sbjct: 58 GIFGENEE---------------------------------------------VADRAYT 72
Query: 597 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 656
DD+ A A + +V T GDG ND L+
Sbjct: 73 GREFDDLPLAEQREACRRACCFARVEPSHKSKIVEY--LQSYDEITAMTGDGVNDAPALK 130
Query: 657 EADIGVGISGVEGMQAVMSSDIAIAQFRF 685
+A+IG+ + A +S++ +A F
Sbjct: 131 KAEIGIAMGSGT-AVAKTASEMVLADDNF 158
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.1 bits (108), Expect = 5e-06
Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 1/75 (1%)
Query: 613 GCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQA 672
G S + ++ L + + IGDGA D+ AD +G G Q
Sbjct: 141 GFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQ 200
Query: 673 VM-SSDIAIAQFRFL 686
V ++ I F L
Sbjct: 201 VKDNAKWYITDFVEL 215
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 39.6 bits (91), Expect = 9e-04
Identities = 20/181 (11%), Positives = 48/181 (26%), Gaps = 11/181 (6%)
Query: 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESK 546
+ E I + GI + ++TG+ ++ A + + + + +
Sbjct: 17 NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76
Query: 547 TLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDL 606
S D+ + D L+I +++ ++ +
Sbjct: 77 IFLASMDEEWILWNEIRKRFPNARTSYTMPDR------RAGLVIMRETINVETVREIINE 130
Query: 607 FLELAIGCASVICCRSSPKQKALVTRLVKTK-----TSSTTLAIGDGANDVGMLQEADIG 661
+ S + + K +GDG ND+ +
Sbjct: 131 LNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK 190
Query: 662 V 662
V
Sbjct: 191 V 191
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 39.7 bits (91), Expect = 9e-04
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 642 TLAIGDGANDVGMLQEADIGVGISG 666
TL +GDG ND +L+ D V + G
Sbjct: 206 TLGLGDGPNDAPLLEVMDYAVIVKG 230
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 40.0 bits (93), Expect = 0.001
Identities = 38/276 (13%), Positives = 81/276 (29%), Gaps = 29/276 (10%)
Query: 660 IGVGISGV-EGMQAVMSSDIAIAQFRFLERLLLVH--------GHWCYRRISSMICYFFY 710
+ + ++ + EG+ AV+++ +A+ R ++ +V G Y + I Y
Sbjct: 185 VALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLIS 244
Query: 711 KNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGV-------------- 756
N+ +F A L N+ LP ALG
Sbjct: 245 SNVGEVVCIFLTAA---LGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRS 301
Query: 757 FDQDVSARFCLKFPL---LYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQA 813
+ + + + + Y +W + GV + F
Sbjct: 302 PKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHF 361
Query: 814 FRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGA 873
E+ T + +V + C S++ + + W I L+
Sbjct: 362 EGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSL 421
Query: 874 MDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLL 909
+ + + A + WL+ L + + +
Sbjct: 422 HFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIG 457
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 38.9 bits (89), Expect = 0.002
Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Query: 597 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK--TSSTTLAIGDGANDVGM 654
E+ + + ++ +G +S K KA L K + A+GD ND M
Sbjct: 152 DGWEEVLVEGGFKVTMGSRFYTVHGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPM 211
Query: 655 LQEADIGV 662
+ D
Sbjct: 212 FEVVDKVF 219
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 37.0 bits (85), Expect = 0.002
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 477 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKME 517
+ D L+ + +L + GIK+ ++TGD
Sbjct: 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWR 49
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 978 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.94 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.93 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.9 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.89 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.88 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.61 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.89 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.85 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.78 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.75 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.74 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.65 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.61 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.55 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.54 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.51 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.46 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.42 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.42 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.41 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 98.38 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.2 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.06 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.03 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.91 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.41 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.41 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 97.31 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.25 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 96.96 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 96.79 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.77 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.6 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.5 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.79 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 95.74 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.63 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 95.61 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.59 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 95.55 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 95.36 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.23 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 94.96 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 94.47 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 93.63 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 93.51 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 92.96 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 92.86 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 92.43 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 92.41 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 92.11 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 91.38 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 89.29 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 87.78 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 87.42 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 81.99 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 81.05 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 80.14 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.94 E-value=1e-27 Score=234.66 Aligned_cols=148 Identities=22% Similarity=0.325 Sum_probs=121.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
||+|++++++|+.|+++||++||+|||+..||.++|+++||+.++....
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~------------------------------- 67 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA------------------------------- 67 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCT-------------------------------
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccc-------------------------------
Confidence 9999999999999999999999999999999999999999987664210
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcC
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 647 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGD 647 (978)
...++|.++......+..+...+ ..+|+|++|+||..+|+.+|+ .|++|+|+||
T Consensus 68 -------------------~~~~~~~~~~~~~~~~~~~~~~~------~~v~ar~~p~~K~~lv~~l~~-~g~~Va~vGD 121 (168)
T d1wpga2 68 -------------------DRAYTGREFDDLPLAEQREACRR------ACCFARVEPSHKSKIVEYLQS-YDEITAMTGD 121 (168)
T ss_dssp -------------------TTEEEHHHHHHSCHHHHHHHHHH------CCEEESCCHHHHHHHHHHHHH-TTCCEEEEEC
T ss_pred -------------------cccccccccchhhHHHHhhhhhh------hhhhhccchhHHHHHHHHHHh-cccceeEEec
Confidence 01455555555444444444442 349999999999999999998 8999999999
Q ss_pred CcCCHHHhhhccccccccCCccchhccccceehhc--hhhhHHHHHHhh
Q 002029 648 GANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHG 694 (978)
Q Consensus 648 G~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~--f~~l~~lll~~g 694 (978)
|.||++||++|||||++.. ....|+++||+++.+ |..+..+ +.+|
T Consensus 122 G~nD~~AL~~AdvGIa~~~-gt~~a~~aAdivl~~~~l~~v~~~-I~~G 168 (168)
T d1wpga2 122 GVNDAPALKKAEIGIAMGS-GTAVAKTASEMVLADDNFSTIVAA-VEEG 168 (168)
T ss_dssp SGGGHHHHHHSSEEEEETT-SCHHHHHTCSEEETTCCTHHHHHH-HHHH
T ss_pred CCCCHHHHHhCCEEEEecc-ccHHHHHhCCEEEccCCHHHHHHH-HHcC
Confidence 9999999999999999953 333388999999998 6667777 6766
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.93 E-value=4.5e-27 Score=241.67 Aligned_cols=171 Identities=16% Similarity=0.197 Sum_probs=126.3
Q ss_pred ChHHHHHHHHHHhhhcceeccccCCCCcE--EEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEee
Q 002029 290 HADVIQKFLRLLAICHTALPEVDEENGKI--SYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYS 367 (978)
Q Consensus 290 ~~~~~~~~~~~lalC~~~~~~~~~~~~~~--~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~ 367 (978)
.++.++.+++++++||++....++..... ....|+|+|.||+.+|.+.|..... .+..|+
T Consensus 30 ~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~~~~~------------------~r~~~~ 91 (214)
T d1q3ia_ 30 RSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRK------------------MRDRNP 91 (214)
T ss_dssp CSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHSCHHH------------------HHHTSC
T ss_pred CCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCCCHHH------------------HHhhCc
Confidence 45677889999999999987544321110 1125799999999999988764322 246788
Q ss_pred EeEeecCCCCCceEEEEEEeC--CCeEEEEEeCCchHHHHHhccc---------chhhHHHHHHHHHHHHHccceeEeeE
Q 002029 368 LLNVLEFSSSRKRMSVIVRSE--EGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILA 436 (978)
Q Consensus 368 il~~~~F~s~rkrmsviv~~~--~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~Glr~l~~A 436 (978)
++..+||+|+||||+++++.+ ++.+++|+|||||+|+++|+.. +++.++.+.+.+++|+.+|+|||++|
T Consensus 92 ~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A 171 (214)
T d1q3ia_ 92 KVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFC 171 (214)
T ss_dssp EEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceeechHHHHHHHHHHHHHHhhCCcEEEEEE
Confidence 999999999999999999976 4678999999999999999853 35678889999999999999999999
Q ss_pred EEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCC
Q 002029 437 YRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNG 493 (978)
Q Consensus 437 ~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~ 493 (978)
||+++.+++..|.. .+.+ ..+.+|+||+|+|++||+||+|++
T Consensus 172 ~k~l~~~~~~~~~~----------~~~~-----~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 172 QLNLPSGKFPRGFK----------FDTD-----ELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp EEEECTTTSCTTCC----------CCTT-----TTSSCCSSEEEEEEEEEESCCSCC
T ss_pred EEecCccccccccc----------cChh-----hhhhhcCCCEEEEEEEEEeCCCCC
Confidence 99999876654321 1111 124568999999999999999975
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.90 E-value=1.4e-24 Score=203.46 Aligned_cols=124 Identities=24% Similarity=0.319 Sum_probs=103.0
Q ss_pred cccEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHH
Q 002029 476 KNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKS 555 (978)
Q Consensus 476 ~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~ 555 (978)
-|.+..+.++++|++|++++++|+.|+++||++||+|||+.++|.++|++|||-
T Consensus 8 ~d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~-------------------------- 61 (135)
T d2b8ea1 8 FDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD-------------------------- 61 (135)
T ss_dssp EECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--------------------------
T ss_pred ECCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh--------------------------
Confidence 355666789999999999999999999999999999999999999999999982
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHH
Q 002029 556 AAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVK 635 (978)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk 635 (978)
.++++++|++|..+|+.+|
T Consensus 62 -------------------------------------------------------------~v~~~~~p~~k~~~v~~~q 80 (135)
T d2b8ea1 62 -------------------------------------------------------------LVIAEVLPHQKSEEVKKLQ 80 (135)
T ss_dssp -------------------------------------------------------------EEECSCCHHHHHHHHHHHT
T ss_pred -------------------------------------------------------------hhccccchhHHHHHHHHHH
Confidence 1899999999999999997
Q ss_pred ccCCCeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc--hhhhHHH
Q 002029 636 TKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERL 689 (978)
Q Consensus 636 ~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~--f~~l~~l 689 (978)
+ +..|+|+|||.||+|||++|||||++.+.. ..++++||+++.+ ++.+..+
T Consensus 81 ~--~~~v~~vGDg~nD~~aL~~Advgia~~~~~-~~~~~aADivl~~~~l~~i~~a 133 (135)
T d2b8ea1 81 A--KEVVAFVGDGINDAPALAQADLGIAVGSGS-DVAVESGDIVLIRDDLRDVVAA 133 (135)
T ss_dssp T--TSCEEEEECSSSSHHHHHHSSEEEEECCC---------SEEESSCCTHHHHHH
T ss_pred c--CCEEEEEeCCCCcHHHHHhCCeeeecCccC-HHHHHhCCEEEECCCHHHHHHH
Confidence 5 569999999999999999999999995443 3388999999987 4445443
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.89 E-value=9.1e-29 Score=277.55 Aligned_cols=335 Identities=13% Similarity=0.047 Sum_probs=217.4
Q ss_pred cccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcccccCCcccCchh
Q 002029 200 SNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDER 279 (978)
Q Consensus 200 ~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (978)
....|.||...++|+|||||+|+|.|.++.+. .+ ...... +..+ |.
T Consensus 30 l~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~-------~~--~il~~~-k~~g---------------------~n--- 75 (380)
T d1qyia_ 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQ-------KD--KILNKL-KSLG---------------------LN--- 75 (380)
T ss_dssp HHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHT-------TT--HHHHHH-HHTT---------------------CC---
T ss_pred hhchhhcccceeeecCcccchhhhhheeeeec-------ch--hhhHhh-hhcC---------------------CC---
Confidence 34568999999999999999999999864321 10 000000 0000 00
Q ss_pred hhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCC
Q 002029 280 IMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTG 359 (978)
Q Consensus 280 l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~ 359 (978)
.+ -++..+.++|+.+..... .++|++.+++..++..+..+.
T Consensus 76 ----------~~---~dl~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~----------------- 116 (380)
T d1qyia_ 76 ----------SN---WDMLFIVFSIHLIDILKK---------LSHDEIEAFMYQDEPVELKLQ----------------- 116 (380)
T ss_dssp ----------CH---HHHHHHHHHHHHHHHHTT---------SCHHHHHHHHHCSSCHHHHHT-----------------
T ss_pred ----------hh---HHHHHHHHHHHHHHHHhh---------cCCCcHHHHHHHHhhccchHH-----------------
Confidence 00 135566667776543221 257788888765443322211
Q ss_pred ccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchhhHHHHHHHHHHHHHccceeEeeEEEe
Q 002029 360 TKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRE 439 (978)
Q Consensus 360 ~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~A~r~ 439 (978)
...+.+.....+||++.+|+|++.....++.+..+.||+++.+.. .......+...+..++.+|+|++++|++.
T Consensus 117 -~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~a~~~~r~l~~~~~~ 190 (380)
T d1qyia_ 117 -NISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHV-----SDATLFSLKGALWTLAQEVYQEWYLGSKL 190 (380)
T ss_dssp -TSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTTC-----SCCGGGSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcCC-----cHHHHHHHHhHHHHHHHHHHHHHHHhhhc
Confidence 123556667789999999999988766555566666777665421 12234456678889999999999999775
Q ss_pred CCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCC--ChHHHHHHHHHcCCeEEEEcCCChh
Q 002029 440 LDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQN--GVPECIDKLAQAGIKLWVLTGDKME 517 (978)
Q Consensus 440 l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~--~v~~~I~~L~~aGIkv~mlTGD~~~ 517 (978)
.++.+ .....+....|+++.+|+++| +++++++.|+++||+++|+|||+..
T Consensus 191 ~~~~~---------------------------~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~ 243 (380)
T d1qyia_ 191 YEDVE---------------------------KKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYT 243 (380)
T ss_dssp HHHHH---------------------------CSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred ccccc---------------------------cccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHH
Confidence 54322 112245566799999999766 9999999999999999999999999
Q ss_pred hHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhh
Q 002029 518 TAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTY 597 (978)
Q Consensus 518 tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~ 597 (978)
+|..+++++||...-.....+..++. ............
T Consensus 244 ~a~~il~~lgl~~~F~~~~i~~~~d~----------------------~~~~~~~~~~~~-------------------- 281 (380)
T d1qyia_ 244 ETVVPFENLGLLPYFEADFIATASDV----------------------LEAENMYPQARP-------------------- 281 (380)
T ss_dssp HHHHHHHHHTCGGGSCGGGEECHHHH----------------------HHHHHHSTTSCC--------------------
T ss_pred HHHHHHHHcCCcccCCcceEEecchh----------------------hhhhhhcccccc--------------------
Confidence 99999999999653211111111000 000000000000
Q ss_pred hchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhcc---ccccc--cCCccch-
Q 002029 598 ALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD---IGVGI--SGVEGMQ- 671 (978)
Q Consensus 598 ~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~Ad---vGI~i--~g~e~~~- 671 (978)
... .....+... ..++|++|.+|..+++.++. .++.|+|+|||.||++|.+.|| |||++ .|++..+
T Consensus 282 ~~K-P~p~~~~~~------~~~~~~~~~~k~~iv~~~~~-~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~e 353 (380)
T d1qyia_ 282 LGK-PNPFSYIAA------LYGNNRDKYESYINKQDNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGE 353 (380)
T ss_dssp CCT-TSTHHHHHH------HHCCCGGGHHHHHHCCTTCS-CTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHH
T ss_pred ccC-CChHHHHHH------HHHcCCCHHHHHHHHHHhCC-CCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHH
Confidence 000 001112221 26889999999999999987 8899999999999999999999 89965 3443311
Q ss_pred -hccccceehhchhhhHHHH
Q 002029 672 -AVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 672 -a~~asD~vi~~f~~l~~ll 690 (978)
+...||+++.++..+.++|
T Consensus 354 l~~~~AD~ii~~~~el~~il 373 (380)
T d1qyia_ 354 LEAHHADYVINHLGELRGVL 373 (380)
T ss_dssp HHHTTCSEEESSGGGHHHHH
T ss_pred HHhCCCCEEECCHHHHHHHH
Confidence 2237999999998887774
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.88 E-value=2.6e-23 Score=217.37 Aligned_cols=178 Identities=21% Similarity=0.231 Sum_probs=128.7
Q ss_pred ChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEe
Q 002029 290 HADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLL 369 (978)
Q Consensus 290 ~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il 369 (978)
..+.+++++.++++||++....++..+.. ...++|+|.||+.+|.+.|+.......... ...........+..|+++
T Consensus 46 ~~~~l~~ll~~~~LCn~a~l~~~~~~~~~-~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v 122 (239)
T d1wpga3 46 QFDGLVELATICALCNDSSLDFNETKGVY-EKVGEATETALTTLVEKMNVFNTEVRNLSK--VERANACNSVIRQLMKKE 122 (239)
T ss_dssp GCHHHHHHHHHHHHSCSCEEEEETTTTEE-EEESCHHHHHHHHHHHHHCTTCCCCSSSCH--HHHTTHHHHHHHHHEEEE
T ss_pred ccHHHHHHHHHHHhcCCCEeeecCCCCeE-EEcCCCCcHHHHHHHHHhCCChHHhhccch--hhhhccchhhhhhhCeEE
Confidence 45678899999999999988765544443 455899999999999999975533211000 000000000123679999
Q ss_pred EeecCCCCCceEEEEEEeCCC-----eEEEEEeCCchHHHHHhccc---------chhhHHHHHHHHHHH--HHccceeE
Q 002029 370 NVLEFSSSRKRMSVIVRSEEG-----TLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEY--ADAGLRTL 433 (978)
Q Consensus 370 ~~~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~--a~~Glr~l 433 (978)
.++||||+||||||+++.+++ .+++|+|||||.|+++|+.. +++.++.+.+.++++ +.+|+|||
T Consensus 123 ~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvL 202 (239)
T d1wpga3 123 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCL 202 (239)
T ss_dssp EEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEE
T ss_pred EEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEE
Confidence 999999999999999998764 47899999999999999853 345677777788876 67999999
Q ss_pred eeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEee
Q 002029 434 ILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAV 486 (978)
Q Consensus 434 ~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~i 486 (978)
++|||+++.++...+. .+. ...+.+|+||+|+|++||
T Consensus 203 a~A~k~~~~~~~~~~~-----------~~~-----~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 203 ALATRDTPPKREEMVL-----------DDS-----SRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp EEEEESSCCCGGGCCT-----------TCG-----GGHHHHTCSEEEEEEEEE
T ss_pred EEEEEECCcccccccc-----------cch-----hhHHHhcCCCEEEEEECC
Confidence 9999999865432111 111 113578999999999997
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.61 E-value=7.1e-15 Score=168.35 Aligned_cols=214 Identities=15% Similarity=0.099 Sum_probs=169.0
Q ss_pred hhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccc
Q 002029 693 HGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLL 772 (978)
Q Consensus 693 ~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~l 772 (978)
.||..+.|++|.+.|.+..|+..++..+++.++. ..+++++.|++|+|++++.+|+++++.++ ++++.+.+.|+
T Consensus 227 ~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~l~---~p~pl~~~qILwinli~d~lpaiaL~~ep--~d~~iM~~~Pr- 300 (472)
T d1wpga4 227 LGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG---LPEALIPVQLLWVNLVTDGLPATALGFNP--PDLDIMDRPPR- 300 (472)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCSCCHHHHHHHHHTTTHHHHHHHTTCC--CCSGGGGSCCC-
T ss_pred HHHHHHHHhHHhhhhhhhhhHHHHHHHHHHHHcC---CCccccHHHHHHHHHHhHHHHHHHHhcCC--CchhhhcCCCC-
Confidence 4999999999999999999999999998887775 55679999999999999999999999864 44555666665
Q ss_pred hhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-----------------------CCCceehhhHHHHH
Q 002029 773 YQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFR-----------------------KGGEVIGLEILGTT 829 (978)
Q Consensus 773 y~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~-----------------------~~g~~~~~~~~~~~ 829 (978)
++++++++..++..++..|++.+++++.++++.+...... .+..........|+
T Consensus 301 ---~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~ 377 (472)
T d1wpga4 301 ---SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTM 377 (472)
T ss_dssp ---CTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHH
T ss_pred ---CCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHH
Confidence 6788999999999999999999988877776654321100 00111123456799
Q ss_pred HHHHHHHHHHHHHHHhhcc--h-----hhHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhcCChHHHHHHHH
Q 002029 830 MYTCVVWVVNCQMALSVTY--F-----TYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLL 902 (978)
Q Consensus 830 ~f~~~v~~~~~~~~~~~~~--~-----~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~il~ 902 (978)
+|+++++.+.++.. ..++ . .++.|.+++.++++.+++++++.++|+ ++. +|+..+.++..|+.++.
T Consensus 378 ~F~~lv~~q~~~~~-~~rs~~~s~~~~~~~~N~~l~~av~i~~~l~~~i~yiP~-l~~-----vf~~~pL~~~~w~i~l~ 450 (472)
T d1wpga4 378 ALSVLVTIEMCNAL-NSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDP-LPM-----IFKLKALDLTQWLMVLK 450 (472)
T ss_dssp HHHHHHHHHHHHHH-TTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTT-THH-----HHTCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHhcCCcchhhcCccccHHHHHHHHHHHHHHHHHHHhhH-HHH-----HHcccCCCHHHHHHHHH
Confidence 99999888777654 3332 1 245778888888888888888888985 344 67788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhC
Q 002029 903 VLMSSLLPYFTYSAIQMRFF 922 (978)
Q Consensus 903 ~~~~~ll~~~~~k~~~r~~~ 922 (978)
+++++++.+++.|++.|+|.
T Consensus 451 ~~~~~~~~~El~K~~~R~~~ 470 (472)
T d1wpga4 451 ISLPVIGLDEILKFIARNYL 470 (472)
T ss_dssp HHTHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999998875
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.89 E-value=1.3e-09 Score=110.63 Aligned_cols=132 Identities=19% Similarity=0.253 Sum_probs=93.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
+++|++.++|+.|++.|++++++||.....+..+++.+|+-..+ ++.-+.
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~--v~an~~---------------------------- 131 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFANRL---------------------------- 131 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEECE----------------------------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccc--eeeeee----------------------------
Confidence 47899999999999999999999999999999999999984321 110000
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHcc-CCCeEEEEcC
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK-TSSTTLAIGD 647 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~-~~~~v~aiGD 647 (978)
....+|....... .-....+..|+.+++.+++. .-+.++++||
T Consensus 132 ------------------~~~~~G~~~g~~~------------------~~p~~~~~~K~~~v~~~~~~~~~~~~~~vGD 175 (217)
T d1nnla_ 132 ------------------KFYFNGEYAGFDE------------------TQPTAESGGKGKVIKLLKEKFHFKKIIMIGD 175 (217)
T ss_dssp ------------------EECTTSCEEEECT------------------TSGGGSTTHHHHHHHHHHHHHCCSCEEEEES
T ss_pred ------------------eeeehhcccccee------------------eeeeeccchHHHHHHHHHhccCccccEEEEe
Confidence 0000111000000 00013356799999998764 2357999999
Q ss_pred CcCCHHHhhhccccccccCCcc-chhccccceehhchhhh
Q 002029 648 GANDVGMLQEADIGVGISGVEG-MQAVMSSDIAIAQFRFL 686 (978)
Q Consensus 648 G~ND~~ml~~AdvGI~i~g~e~-~~a~~asD~vi~~f~~l 686 (978)
|.||++|++.|++||++.++.. .+.+..+|+++.+|..|
T Consensus 176 s~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 176 GATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp SHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred CHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCCHHHh
Confidence 9999999999999999965433 33556799999888754
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.85 E-value=6.7e-10 Score=113.38 Aligned_cols=180 Identities=12% Similarity=0.146 Sum_probs=97.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc----cCceEEEEecCCCcccccchhhhHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR----QGMRQVIISSETPESKTLEKSEDKSAAAAALKAS 564 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~----~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (978)
.+.+.+.++|++|+++|++++++||+....+...+...++-. .++..+.............. ... ....
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~--~~~-----~~~~ 91 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDE--EWI-----LWNE 91 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSH--HHH-----HHHH
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccH--HHH-----HHHH
Confidence 477889999999999999999999999999999998887632 22222221111111111111 000 1111
Q ss_pred HHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhcc-----CeeEEEeCCchhHHHHHHHHHccC-
Q 002029 565 VLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGC-----ASVICCRSSPKQKALVTRLVKTKT- 638 (978)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~-----~~vi~~r~sP~qK~~iV~~lk~~~- 638 (978)
+............ .......+.+....... +..++...++.... ...+-.......|...++.+.+..
T Consensus 92 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~ 165 (230)
T d1wr8a_ 92 IRKRFPNARTSYT---MPDRRAGLVIMRETINV---ETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLG 165 (230)
T ss_dssp HHHHCTTCCBCTT---GGGCSSCEEECTTTSCH---HHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHT
T ss_pred HHHhcccccceee---cccceeeEEEecccccH---HHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccc
Confidence 1111111000000 01111122222211110 01111111111100 011111223457888888876543
Q ss_pred --CCeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 639 --SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 639 --~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
.+.|+++|||.||.+|++.|++||+|.+.. ..++..||+++..
T Consensus 166 i~~~~~~~iGD~~NDi~ml~~ag~~vav~na~-~~~k~~A~~v~~~ 210 (230)
T d1wr8a_ 166 IKPKEVAHVGDGENDLDAFKVVGYKVAVAQAP-KILKENADYVTKK 210 (230)
T ss_dssp SCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHTTCSEECSS
T ss_pred cchhheeeeecCccHHHHHHHCCeEEEECCCC-HHHHHhCCEEECC
Confidence 367999999999999999999999996554 3488999999876
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.78 E-value=1.9e-09 Score=113.21 Aligned_cols=192 Identities=12% Similarity=0.079 Sum_probs=104.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCC-------Cc--ccccchhhhHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET-------PE--SKTLEKSEDKSAAAA 559 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~-------~~--~~~~~~~~~~~~~~~ 559 (978)
++.+.+.++|++|+++||+++++||++...+..+.+++++..+....+..++.. .. ....+.+... .+..
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~-~i~~ 99 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYR-FLEK 99 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHH-HHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHH-HHHH
Confidence 477889999999999999999999999999999999998866544333333221 10 1111111111 1111
Q ss_pred HHHHHHH-------------------HHHHh-hhhhhc-----c---ccCCCCCeEEEEcCchhhhhchhhHHHHHHHHH
Q 002029 560 ALKASVL-------------------HQLIR-GKELLD-----S---SNESLGPLALIIDGKSLTYALEDDVKDLFLELA 611 (978)
Q Consensus 560 ~~~~~~~-------------------~~~~~-~~~~~~-----~---~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~ 611 (978)
...+... ..... ...... . .........+.++...........+.+.+..-.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 179 (271)
T d1rkqa_ 100 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKY 179 (271)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHE
T ss_pred HHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcce
Confidence 1110000 00000 000000 0 000111222233322221111112222222211
Q ss_pred hc-cCeeEEEeCCch--hHHHHHHHHHccC---CCeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 612 IG-CASVICCRSSPK--QKALVTRLVKTKT---SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 612 ~~-~~~vi~~r~sP~--qK~~iV~~lk~~~---~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
.. ....-+...+|. +|+..++.+.+.. ...++++|||.||.+|++.|+.||+|.+.. ..++..||++...
T Consensus 180 ~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~-~~lk~~a~~i~~~ 255 (271)
T d1rkqa_ 180 TVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAI-PSVKEVANFVTKS 255 (271)
T ss_dssp EEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHCSEECCC
T ss_pred EEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCC-HHHHHhCCEEcCC
Confidence 00 000012334555 6999999887753 356999999999999999999999996544 3378899998875
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.75 E-value=7e-09 Score=105.65 Aligned_cols=176 Identities=15% Similarity=0.140 Sum_probs=98.4
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc----cCceEEEEecCCCcccccchhhhHHHHHHHHH
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR----QGMRQVIISSETPESKTLEKSEDKSAAAAALK 562 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~----~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 562 (978)
+.++.+++.++++.|++.|++++++||++...+..++...|+-. .++.. ..+...........+...+.+
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~-~~~~~~~~~~~~~~~~~~~~~----- 91 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGI-MFDNDGSIKKFFSNEGTNKFL----- 91 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTE-EECTTSCEEESSCSHHHHHHH-----
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceE-EEeCCccEEEecChHHHHHHH-----
Confidence 45577899999999999999999999999999999998887632 12211 122211111111111111111
Q ss_pred HHHHHHHHhhhh--hhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeE-----EEeCCc--hhHHHHHHH
Q 002029 563 ASVLHQLIRGKE--LLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVI-----CCRSSP--KQKALVTRL 633 (978)
Q Consensus 563 ~~~~~~~~~~~~--~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi-----~~r~sP--~qK~~iV~~ 633 (978)
........ ................+.... +............+ +....| ..|+..++.
T Consensus 92 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~ 158 (225)
T d1l6ra_ 92 ----EEMSKRTSMRSILTNRWREASTGFDIDPEDV---------DYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNK 158 (225)
T ss_dssp ----HHHTTTSSCBCCGGGGGCSSSEEEBCCGGGH---------HHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHH
T ss_pred ----HHHHHhcCcceeecccceeeeeccccCHHHH---------HHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHH
Confidence 11111000 000000011112222222211 11222222222222 223334 379988887
Q ss_pred HHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 634 VKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 634 lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
+.+..| ..|+++|||.||.+|++.|++||+|++... .++..||++...
T Consensus 159 l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na~~-~~k~~ad~v~~~ 209 (225)
T d1l6ra_ 159 LKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATD-NIKAVSDFVSDY 209 (225)
T ss_dssp HHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCH-HHHHHCSEECSC
T ss_pred HhhhhccchhheeeecCCcchHHHHHHCCeEEEECCCcH-HHHHhCCEEECC
Confidence 765433 569999999999999999999999965443 388899998765
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.74 E-value=1e-08 Score=107.32 Aligned_cols=62 Identities=19% Similarity=0.147 Sum_probs=50.8
Q ss_pred EeCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 620 CRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 620 ~r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
..++|. .|+..++.+.++.| ..|+++|||.||.+||+.|+.||+|.+.. .+++..||++...
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~-~~lk~~A~~v~~~ 248 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAA-ENIKQIARYATDD 248 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCC-HHHHHHCSEECCC
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCC-HHHHHhCCEEcCC
Confidence 456665 59999998876544 57999999999999999999999996543 3488999999876
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.65 E-value=2.1e-08 Score=97.19 Aligned_cols=113 Identities=16% Similarity=0.137 Sum_probs=83.5
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhh
Q 002029 496 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 575 (978)
Q Consensus 496 ~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (978)
.+|+.|+..|+.+.++||+....+...++++++..
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------------------- 73 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------------- 73 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------------------------
Confidence 48999999999999999999999999999888632
Q ss_pred hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHcc---CCCeEEEEcCCcCCH
Q 002029 576 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAIGDGANDV 652 (978)
Q Consensus 576 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~~~~v~aiGDG~ND~ 652 (978)
++. ....|...++.+.+. ....|+++|||.||.
T Consensus 74 ------------------------------------------~~~--~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl 109 (177)
T d1k1ea_ 74 ------------------------------------------FFL--GKLEKETACFDLMKQAGVTAEQTAYIGDDSVDL 109 (177)
T ss_dssp ------------------------------------------EEE--SCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred ------------------------------------------ccc--ccccHHHHHHHHHHHhcCCcceeEEecCCccHH
Confidence 111 123344444433332 347899999999999
Q ss_pred HHhhhccccccccCCccchhccccceehhc------hhhhHHHH-HHhhhhhh
Q 002029 653 GMLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLL-LVHGHWCY 698 (978)
Q Consensus 653 ~ml~~AdvGI~i~g~e~~~a~~asD~vi~~------f~~l~~ll-l~~gR~~~ 698 (978)
+||+.|++|+++.+.... ++..||+++.. .+-+..+| -..|+|.+
T Consensus 110 ~~l~~~g~siap~nA~~~-vk~~A~~Vt~~~GG~GavrE~~e~il~~~~~~~~ 161 (177)
T d1k1ea_ 110 PAFAACGTSFAVADAPIY-VKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 161 (177)
T ss_dssp HHHHHSSEEEECTTSCHH-HHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHhhCCeEEEcCCccHH-HHHhCCEEeCCCCCCchHHHHHHHHHHHCCChHH
Confidence 999999999999665443 89999999976 44455554 35566544
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.61 E-value=2e-07 Score=98.02 Aligned_cols=61 Identities=23% Similarity=0.295 Sum_probs=50.7
Q ss_pred eCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 621 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 621 r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
.++|. .|+..++.+.+..| ..|+++|||.||.+||+.|+.||+|.+.. .+++..||++...
T Consensus 206 di~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~-~~~k~~A~~v~~~ 271 (285)
T d1nrwa_ 206 ELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAR-EDIKSIADAVTLT 271 (285)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCC-HHHHHHCSEECCC
T ss_pred EEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCC-HHHHHhCCEEcCC
Confidence 45665 79999999887654 57999999999999999999999996554 3488999998875
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.55 E-value=2.7e-08 Score=103.64 Aligned_cols=62 Identities=26% Similarity=0.374 Sum_probs=49.3
Q ss_pred eCCch--hHHHHHHHHHccC---CCeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhch
Q 002029 621 RSSPK--QKALVTRLVKTKT---SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 683 (978)
Q Consensus 621 r~sP~--qK~~iV~~lk~~~---~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f 683 (978)
.+.|. .|+..++.+.++. ...++++|||.||.+||+.|+.||+|.+... .++..||++....
T Consensus 179 ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~-~lk~~A~~vt~~~ 245 (260)
T d2rbka1 179 DVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKE-DVKAAADYVTAPI 245 (260)
T ss_dssp EEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHSSEECCCG
T ss_pred EEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCH-HHHHhCCEEeCCC
Confidence 33454 6999998887653 3689999999999999999999999965543 3788999987653
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.54 E-value=1.7e-07 Score=95.06 Aligned_cols=40 Identities=8% Similarity=0.078 Sum_probs=37.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
.+.+.+.++|++|+++|++++++||+....+..+.+++++
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~ 60 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGL 60 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhcc
Confidence 4778999999999999999999999999999999999886
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.51 E-value=2.4e-07 Score=91.94 Aligned_cols=129 Identities=19% Similarity=0.136 Sum_probs=88.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
+..++....++.+ +.+.++.++|+.............++..............
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------------------- 121 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 121 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS--------------------------
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccc--------------------------
Confidence 4566777777665 5789999999999999999888887754322221111110
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCC
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 648 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG 648 (978)
.........+..+...++.++. ..+.|+|||||
T Consensus 122 ----------------------------------------------~~~~~~~~~~~~~~~~~~~~~i-~~~eviaiGDg 154 (206)
T d1rkua_ 122 ----------------------------------------------RVVGYQLRQKDPKRQSVIAFKS-LYYRVIAAGDS 154 (206)
T ss_dssp ----------------------------------------------CEEEEECCSSSHHHHHHHHHHH-TTCEEEEEECS
T ss_pred ----------------------------------------------ccccccccchhhHHHHHHHhcc-cccceEEecCC
Confidence 1113333444555566677765 77899999999
Q ss_pred cCCHHHhhhccccccccCCccchhccccceehh-chhhhHHHHHH
Q 002029 649 ANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA-QFRFLERLLLV 692 (978)
Q Consensus 649 ~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~-~f~~l~~lll~ 692 (978)
.||++|++.|++||+|...+ .-.++++|++.. ++..+...++.
T Consensus 155 ~NDi~Ml~~Ag~gIAmna~~-~v~~~~~~~~~~~~~~d~~~~~~~ 198 (206)
T d1rkua_ 155 YNDTTMLSEAHAGILFHAPE-NVIREFPQFPAVHTYEDLKREFLK 198 (206)
T ss_dssp STTHHHHHHSSEEEEESCCH-HHHHHCTTSCEECSHHHHHHHHHH
T ss_pred ccCHHHHHhCCccEEECCCH-HHHHhCCCceeecCHHHHHHHHHH
Confidence 99999999999999994433 335678899764 47777776443
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.46 E-value=1.4e-08 Score=106.40 Aligned_cols=63 Identities=24% Similarity=0.361 Sum_probs=50.9
Q ss_pred eCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhchh
Q 002029 621 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 684 (978)
Q Consensus 621 r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~ 684 (978)
.++|. .|+..++.+.++.+ ..|+++|||.||.+||+.|++||+|++... .++..||+++.+.+
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~-~~k~~A~~i~~~~~ 250 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIE-KVKEASDIVTLTNN 250 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCH-HHHHHCSEECCCTT
T ss_pred eecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCH-HHHHhCCEEcCCCC
Confidence 45665 79999998876533 569999999999999999999999965543 38999999987533
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.42 E-value=2.1e-08 Score=105.51 Aligned_cols=56 Identities=16% Similarity=0.252 Sum_probs=46.4
Q ss_pred hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 626 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 626 qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
.|+..++.+.+..+ ..|+++|||.||.+||+.|++||+|++... .++..||++...
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~-~~k~~a~~v~~~ 265 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATD-SAKSHAKCVLPV 265 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCH-HHHHHSSEECSS
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCH-HHHHhCCEEECC
Confidence 68888887776433 689999999999999999999999965543 488999999864
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.42 E-value=3e-07 Score=93.94 Aligned_cols=42 Identities=7% Similarity=0.030 Sum_probs=38.1
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
.+...+.+.++|++|+++|++++++||+....+..+.+.+++
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~ 56 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEV 56 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcc
Confidence 455567899999999999999999999999999999999886
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.41 E-value=2e-07 Score=94.39 Aligned_cols=136 Identities=13% Similarity=0.129 Sum_probs=92.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCc-eEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM-RQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
+++|++.+.++.|++.|+++.++||-....+..+.+.+|+...-. ....++.+..
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~------------------------ 130 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYI------------------------ 130 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBC------------------------
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcc------------------------
Confidence 478999999999999999999999999999999999888743210 0111111100
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcC
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 647 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGD 647 (978)
...+.. .....+++.+|..|..+++.++. .+..|+++||
T Consensus 131 ---------------------~~~~~~-------------------~~~~~~~~~k~~~~~~~~~~~~~-~~~~~i~iGD 169 (226)
T d2feaa1 131 ---------------------HIDWPH-------------------SCKGTCSNQCGCCKPSVIHELSE-PNQYIIMIGD 169 (226)
T ss_dssp ---------------------EEECTT-------------------CCCTTCCSCCSSCHHHHHHHHCC-TTCEEEEEEC
T ss_pred ---------------------eecccc-------------------ccccccccCCHHHHHHHHHHhcC-CCceEEEEeC
Confidence 000000 00113456788999999999987 7789999999
Q ss_pred CcCCHHHhhhccccccccCC-ccchhccccceehhchhhhHHH
Q 002029 648 GANDVGMLQEADIGVGISGV-EGMQAVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 648 G~ND~~ml~~AdvGI~i~g~-e~~~a~~asD~vi~~f~~l~~l 689 (978)
+.||.+|+++||+++++.+. +..+........+.+|+.+...
T Consensus 170 s~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~ 212 (226)
T d2feaa1 170 SVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKE 212 (226)
T ss_dssp CGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHH
T ss_pred chhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHH
Confidence 99999999999999987432 1111112224455667776655
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.38 E-value=2.6e-08 Score=112.96 Aligned_cols=125 Identities=18% Similarity=0.148 Sum_probs=92.0
Q ss_pred CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHH
Q 002029 75 TGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTAL 154 (978)
Q Consensus 75 ~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l 154 (978)
......++|.|++++++...+.....+.+.+............... ..|.. .....+..++
T Consensus 125 ~~~~~~~~P~d~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----------------~~~~~~~~ai 185 (472)
T d1wpga4 125 AATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHG---GSWIR----------------GAIYYFKIAV 185 (472)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSSCCSS---SCSSS----------------CGGGHHHHHH
T ss_pred ccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhhHH----------------HHHHHHHHHH
Confidence 3455678999999999998886655554444332211111110000 01110 1123677889
Q ss_pred HHHhccccchhhhhHHHHHHHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCC--cccccCeeEEE
Q 002029 155 MLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKT--GTLTCNSMEFI 228 (978)
Q Consensus 155 ~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKT--GTLT~n~m~~~ 228 (978)
++.++++|++||++++++.++++. +| ++++++||+++++|+||+..++|+||| +|||.|.+++.
T Consensus 186 ~l~V~~iPEgLp~~vti~La~~~~------rm----ak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v~ 251 (472)
T d1wpga4 186 ALAVAAIPEGLPAVITTCLALGTR------RM----AKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEVV 251 (472)
T ss_dssp HHHHHHSCTTHHHHHHHHHHHHHH------HH----HTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhChhhHHHHHHHHHHHHHH------HH----HhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHHHH
Confidence 999999999999999999999999 77 899999999999999999999999998 99999988763
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.20 E-value=7.6e-07 Score=88.37 Aligned_cols=122 Identities=20% Similarity=0.198 Sum_probs=81.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
.++.+++.+.++.++..|..+.++||.....+.......+....-..........
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------- 128 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGK------------------------- 128 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE-------------------------
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccc-------------------------
Confidence 4788999999999999999999999999999988888776633211111100000
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEe--CCchhHHHHHHHHHcc---CCCeE
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR--SSPKQKALVTRLVKTK---TSSTT 642 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r--~sP~qK~~iV~~lk~~---~~~~v 642 (978)
. . ..... ..+..|...++.+.+. ....+
T Consensus 129 ------------------~--~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (210)
T d1j97a_ 129 ------------------L--T---------------------------GDVEGEVLKENAKGEILEKIAKIEGINLEDT 161 (210)
T ss_dssp ------------------E--E---------------------------EEEECSSCSTTHHHHHHHHHHHHHTCCGGGE
T ss_pred ------------------c--c---------------------------ccccccccccccccchhhhHHHHhcccccce
Confidence 0 0 00000 1122233333332221 34679
Q ss_pred EEEcCCcCCHHHhhhccccccccCCccchhccccceehhch
Q 002029 643 LAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 683 (978)
Q Consensus 643 ~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f 683 (978)
+|+|||.||++|++.|++||++.+.+. .+..||+++...
T Consensus 162 i~iGDs~nDi~m~~~ag~~va~na~~~--lk~~Ad~vi~~~ 200 (210)
T d1j97a_ 162 VAVGDGANDISMFKKAGLKIAFCAKPI--LKEKADICIEKR 200 (210)
T ss_dssp EEEESSGGGHHHHHHCSEEEEESCCHH--HHTTCSEEECSS
T ss_pred EEecCCcChHHHHHHCCCCEEECCCHH--HHHhCCEEEcCC
Confidence 999999999999999999999955554 678899999753
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.06 E-value=7.8e-06 Score=82.02 Aligned_cols=66 Identities=17% Similarity=0.213 Sum_probs=48.9
Q ss_pred EEeCCch--hHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhchhhhHHH
Q 002029 619 CCRSSPK--QKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 619 ~~r~sP~--qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~~l~~l 689 (978)
+..+.|. .|+..++.+.+ ...++++|||.||.+|++.|+.|++|...+ +..+|++.+.+...+..+
T Consensus 150 ~idi~p~g~~Kg~al~~l~~--~~~~i~~GDs~ND~~Mf~~~~~~~av~~g~---~~~~A~~~~~~~~ev~~~ 217 (229)
T d1u02a_ 150 IIELRVPGVNKGSAIRSVRG--ERPAIIAGDDATDEAAFEANDDALTIKVGE---GETHAKFHVADYIEMRKI 217 (229)
T ss_dssp EEEEECTTCCHHHHHHHHHT--TSCEEEEESSHHHHHHHHTTTTSEEEEESS---SCCCCSEEESSHHHHHHH
T ss_pred EEEEecCCCCHHHHHHHHhc--cccceeecCCCChHHHHhccCCeEEEEeCC---CCccCeEEcCCHHHHHHH
Confidence 3345554 79999999976 357889999999999999998888774322 345788998875554444
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.03 E-value=3.1e-06 Score=86.44 Aligned_cols=54 Identities=24% Similarity=0.342 Sum_probs=43.1
Q ss_pred chhHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccce
Q 002029 624 PKQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI 678 (978)
Q Consensus 624 P~qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~ 678 (978)
...|+..++.+.+..| ..|+++|||.||.+||+.|+.||+|.+.... .+..||.
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~-lk~~a~~ 216 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPE-LLHWYDQ 216 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHH-HHHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHH-HHHHhhc
Confidence 3479999998887644 5699999999999999999999999654433 5666663
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.91 E-value=5.5e-06 Score=83.81 Aligned_cols=54 Identities=15% Similarity=0.270 Sum_probs=44.9
Q ss_pred hHHHHHHHHHccCCCeEEEEcC----CcCCHHHhhhcc-ccccccCCccchhccccceeh
Q 002029 626 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSDIAI 680 (978)
Q Consensus 626 qK~~iV~~lk~~~~~~v~aiGD----G~ND~~ml~~Ad-vGI~i~g~e~~~a~~asD~vi 680 (978)
.|+..++.+.+.....|+++|| |.||.+||++|+ .|+++.+.+.. ++..+|+++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~-~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDT-VQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHH-HHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHH-HHHHHHhcC
Confidence 6999999998766689999999 569999999997 69999766554 677777765
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.41 E-value=9.3e-05 Score=73.61 Aligned_cols=124 Identities=21% Similarity=0.189 Sum_probs=82.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.++++++++.|++.|+++.++||.....+..+.+++||...-...+
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~-------------------------------- 142 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEML-------------------------------- 142 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEE--------------------------------
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccc--------------------------------
Confidence 568999999999999999999999999999999999999853221111
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCC
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 648 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG 648 (978)
.+... -...-.|+--..+.+.++- ....+++|||+
T Consensus 143 ----------------------~~~~~----------------------~~~kp~p~~~~~~~~~~~~-~~~~~~~igD~ 177 (224)
T d2hsza1 143 ----------------------GGQSL----------------------PEIKPHPAPFYYLCGKFGL-YPKQILFVGDS 177 (224)
T ss_dssp ----------------------CTTTS----------------------SSCTTSSHHHHHHHHHHTC-CGGGEEEEESS
T ss_pred ----------------------ccccc----------------------ccccccchhhHHHHHHhhh-hhhccchhcCc
Confidence 00000 0001112222233344433 56789999999
Q ss_pred cCCHHHhhhccc-ccccc-C--CccchhccccceehhchhhhHHH
Q 002029 649 ANDVGMLQEADI-GVGIS-G--VEGMQAVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 649 ~ND~~ml~~Adv-GI~i~-g--~e~~~a~~asD~vi~~f~~l~~l 689 (978)
.+|+.+-+.|++ .|++. | .........+|+++.++..|.++
T Consensus 178 ~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~i 222 (224)
T d2hsza1 178 QNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 222 (224)
T ss_dssp HHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred HHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHh
Confidence 999999999987 34442 1 11111334689999998877655
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.41 E-value=3.3e-05 Score=77.89 Aligned_cols=44 Identities=25% Similarity=0.418 Sum_probs=34.8
Q ss_pred hHHHHHHHHHccCCCeEEEEcC----CcCCHHHhhhcc-ccccccCCcc
Q 002029 626 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEAD-IGVGISGVEG 669 (978)
Q Consensus 626 qK~~iV~~lk~~~~~~v~aiGD----G~ND~~ml~~Ad-vGI~i~g~e~ 669 (978)
+|+..++.+.+...+.|+++|| |.||.+||+.|+ .|+++++.+.
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~ 233 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPED 233 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHH
Confidence 7998888887656689999999 889999999997 6787766543
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=97.31 E-value=9.8e-05 Score=67.57 Aligned_cols=107 Identities=17% Similarity=0.304 Sum_probs=76.2
Q ss_pred cCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCch
Q 002029 322 AESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADS 401 (978)
Q Consensus 322 ~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~ 401 (978)
++||..+|++++|++.+...... ..++-....||+..++...+.+ +|+ .+..|++.
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~g~~~---~g~--~v~~G~~~ 84 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRERD-------------------VQSLHATFVPFTAQSRMSGINI---DNR--MIRKGSVD 84 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCCC-------------------TTTTTCEEEEEETTTTEEEEEE---TTE--EEEEECHH
T ss_pred CCchHHHHHHHHHHHhcCCCccc-------------------cccccccccccccccceEEEEE---CCE--EEEecHHH
Confidence 57999999999999875432110 1122223355655555444433 343 55669998
Q ss_pred HHHHHhcccchhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEE
Q 002029 402 VMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILL 481 (978)
Q Consensus 402 ~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~ll 481 (978)
.|...+...+....+++.+.++.++.+|..++.+| .|-+++
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va---------------------------------------~d~~~~ 125 (136)
T d2a29a1 85 AIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVV---------------------------------------EGSRVL 125 (136)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEE---------------------------------------ETTEEE
T ss_pred HHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEE---------------------------------------ECCEEE
Confidence 88777766555567788899999999999999999 566899
Q ss_pred EEEeeccccC
Q 002029 482 GATAVEDKLQ 491 (978)
Q Consensus 482 G~i~ieD~lr 491 (978)
|++++.|++|
T Consensus 126 G~i~l~D~iK 135 (136)
T d2a29a1 126 GVIALKDIVK 135 (136)
T ss_dssp EEEEEEESSC
T ss_pred EEEEEEeecC
Confidence 9999999986
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.25 E-value=0.00044 Score=68.28 Aligned_cols=41 Identities=15% Similarity=0.155 Sum_probs=38.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.||+.++++.|+++|+++.++||.....+..+.+..|+-
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~ 128 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLR 128 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 45699999999999999999999999999999999999984
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.96 E-value=0.00092 Score=68.85 Aligned_cols=47 Identities=15% Similarity=0.276 Sum_probs=42.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceE
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQ 535 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~ 535 (978)
+||+|+++.++.|++.|+++.++||--...+..++++.|+..++..+
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I 181 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKV 181 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEE
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceE
Confidence 48999999999999999999999999999999999999986655443
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=96.79 E-value=0.0011 Score=65.74 Aligned_cols=42 Identities=24% Similarity=0.209 Sum_probs=37.7
Q ss_pred ccCCChHHHHHHHHHcC-CeEEEEcCCChhhHHHHHHHcCccc
Q 002029 489 KLQNGVPECIDKLAQAG-IKLWVLTGDKMETAINIGFACSLLR 530 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aG-Ikv~mlTGD~~~tA~~ia~~~gl~~ 530 (978)
++-||+.+++++|++.| +++.++||.....+..+.+..||..
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~ 133 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH 133 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccc
Confidence 45789999999999987 8999999999999999999999853
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.77 E-value=0.0012 Score=64.60 Aligned_cols=119 Identities=15% Similarity=0.121 Sum_probs=80.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
.++.+++.++++.++..+ ++.++|+.....+..+....|+-..-.
T Consensus 83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd---------------------------------- 127 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFD---------------------------------- 127 (210)
T ss_dssp CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred ccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccccc----------------------------------
Confidence 367899999999998775 899999999999999999988743211
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHcc---CCCeEEE
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLA 644 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~~~~v~a 644 (978)
.++.+.-.+..|..+.+.+.+. ..+.+++
T Consensus 128 ------------------------------------------------~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~ 159 (210)
T d2ah5a1 128 ------------------------------------------------GIYGSSPEAPHKADVIHQALQTHQLAPEQAII 159 (210)
T ss_dssp ------------------------------------------------EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred ------------------------------------------------ccccccccccccccccchhhhhhhccccccee
Confidence 1122333333444444433332 3468999
Q ss_pred EcCCcCCHHHhhhccc-ccccc-CCccc-h-hccccceehhchhhhHHH
Q 002029 645 IGDGANDVGMLQEADI-GVGIS-GVEGM-Q-AVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 645 iGDG~ND~~ml~~Adv-GI~i~-g~e~~-~-a~~asD~vi~~f~~l~~l 689 (978)
|||+.+|+.|-++|++ .|++. |.... + ....+|+++.++..|...
T Consensus 160 VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~~ 208 (210)
T d2ah5a1 160 IGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp EESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred ecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 9999999999999998 44552 22111 1 223479998887765543
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.60 E-value=0.0009 Score=67.91 Aligned_cols=41 Identities=32% Similarity=0.294 Sum_probs=38.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+|+.++++.|++.|+++.++||.....+..+-+..|+.
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~ 139 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ 139 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhc
Confidence 68899999999999999999999999999999998888874
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.50 E-value=0.0014 Score=63.89 Aligned_cols=40 Identities=20% Similarity=0.201 Sum_probs=33.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.||++++++.|++.|+++.++|+... .+..+.+..|+.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~ 121 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVE 121 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCG
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccc
Confidence 5679999999999999999999998654 556677777874
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.79 E-value=0.0025 Score=62.07 Aligned_cols=41 Identities=12% Similarity=0.220 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 530 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~ 530 (978)
++.||+.++++.|+ +++++.++|+-....+..+.+..|+..
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~ 122 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMM 122 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGG
T ss_pred ccccchhhhhhhhc-ccccccccccccccccccccccccccc
Confidence 46699999999997 589999999999999999999888743
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=95.74 E-value=0.0072 Score=57.59 Aligned_cols=60 Identities=17% Similarity=0.220 Sum_probs=41.2
Q ss_pred HHHHHHHccCCCeEEEEcCCcCCHHHhhhcccc--ccc-cCCcc-chhccccceehhchhhhHHH
Q 002029 629 LVTRLVKTKTSSTTLAIGDGANDVGMLQEADIG--VGI-SGVEG-MQAVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 629 ~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvG--I~i-~g~e~-~~a~~asD~vi~~f~~l~~l 689 (978)
.+.+.+.- ..+.++||||..+|+.|=+.|+++ +.+ .|... ......||+++.++..+.++
T Consensus 116 ~~~~~~~i-~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ 179 (182)
T d2gmwa1 116 SARDYLHI-DMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 179 (182)
T ss_dssp HHHHHHTB-CGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred chhhhccc-ccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHH
Confidence 33444432 446799999999999999999995 333 23221 12345699999998887776
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.63 E-value=0.015 Score=54.07 Aligned_cols=39 Identities=18% Similarity=0.205 Sum_probs=29.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCCh-hhHHHHHHHcC
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKM-ETAINIGFACS 527 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~-~tA~~ia~~~g 527 (978)
++.|++.++++.|+++|+++.++|+-+. ..+...-+..+
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~ 85 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFD 85 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTT
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhccc
Confidence 5789999999999999999999997544 44444444433
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.61 E-value=0.012 Score=57.98 Aligned_cols=40 Identities=18% Similarity=0.103 Sum_probs=35.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.||+.++++.|+ +|+++.++|+........+.+.+|+.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~ 139 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIK 139 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCG
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccc
Confidence 46899999999996 58999999999998888888888874
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.59 E-value=0.014 Score=58.20 Aligned_cols=40 Identities=23% Similarity=0.290 Sum_probs=35.5
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 530 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~ 530 (978)
+.|++.++++.|+ .|++++++|+.........-+.+|+..
T Consensus 110 ~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~ 149 (247)
T d2gfha1 110 LADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQS 149 (247)
T ss_dssp CCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGG
T ss_pred cCccHHHHHHHhh-cccceEEeecccchhhhhhhhhccccc
Confidence 6789999999998 589999999999999889888988754
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=95.55 E-value=0.0026 Score=58.37 Aligned_cols=31 Identities=23% Similarity=0.246 Sum_probs=28.4
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChh
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKME 517 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ 517 (978)
+|++.+++.+.++.|+++|+++.++||.+..
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~ 64 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESG 64 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHH
Confidence 5789999999999999999999999998753
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=95.36 E-value=0.008 Score=59.72 Aligned_cols=42 Identities=14% Similarity=0.164 Sum_probs=37.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
-.+.||+.+++++|++.|+++.++|+............+|+.
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~ 167 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEG 167 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTB
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcc
Confidence 456899999999999999999999999999888888888863
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.23 E-value=0.0094 Score=56.83 Aligned_cols=40 Identities=15% Similarity=0.284 Sum_probs=33.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+|+++.++.|++.|+++.++|+-+... ..+-+..++.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~ 118 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIA 118 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCG
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhccc
Confidence 577999999999999999999999976544 4566777764
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=94.96 E-value=0.0066 Score=52.80 Aligned_cols=32 Identities=19% Similarity=0.292 Sum_probs=28.4
Q ss_pred CcCceeecCceeccCCeEEEEEEEeCccchhcc
Q 002029 40 TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ 72 (978)
Q Consensus 40 ~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~ 72 (978)
+..|++|+||.+.+ |+++++|++||.+|.+.+
T Consensus 79 ~~~n~lf~GT~V~~-G~~~~~V~~tG~~T~~G~ 110 (115)
T d1wpga1 79 DKKNMLFSGTNIAA-GKALGIVATTGVSTEIGK 110 (115)
T ss_dssp GCTTEECTTCEEEE-CEEEEEEEECGGGSHHHH
T ss_pred cccceEEeccEEEe-eeEEEEEEEEccccHHHH
Confidence 35789999999997 999999999999997654
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=94.47 E-value=0.1 Score=51.91 Aligned_cols=38 Identities=5% Similarity=0.140 Sum_probs=32.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 526 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~ 526 (978)
+.=+++.++|+.|+++|++++++|+....+...++..+
T Consensus 18 ~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 18 EPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp EECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 33378899999999999999999998888888877654
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=93.63 E-value=0.058 Score=52.20 Aligned_cols=26 Identities=27% Similarity=0.330 Sum_probs=23.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGD 514 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD 514 (978)
++-||+.++|+.|+++|+++.++|..
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ 73 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQ 73 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEEC
T ss_pred EecccHHHHHHHHHhhCCeEEEeccc
Confidence 36799999999999999999999963
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=93.51 E-value=0.35 Score=47.63 Aligned_cols=43 Identities=16% Similarity=0.233 Sum_probs=31.3
Q ss_pred eccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHH---HHHcCc
Q 002029 486 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINI---GFACSL 528 (978)
Q Consensus 486 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~i---a~~~gl 528 (978)
-.+++=+++.++|+.|+++|++++++|+....+...+ -+++|+
T Consensus 16 ~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~ 61 (250)
T d2c4na1 16 HDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGV 61 (250)
T ss_dssp ETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTC
T ss_pred ECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccc
Confidence 3455558999999999999999999996554443333 445676
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=92.96 E-value=0.083 Score=50.93 Aligned_cols=42 Identities=19% Similarity=0.268 Sum_probs=36.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 530 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~ 530 (978)
.+.+++.++++.+++.|+++.++|+-....+.......++..
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~ 134 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD 134 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccc
Confidence 467899999999999999999999999988888888777654
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=92.86 E-value=0.39 Score=47.57 Aligned_cols=61 Identities=16% Similarity=0.247 Sum_probs=40.2
Q ss_pred HHHHHHHHccCCCeEEEEcCCc-CCHHHhhhccc-cccc-cCCcc----chhccccceehhchhhhHHH
Q 002029 628 ALVTRLVKTKTSSTTLAIGDGA-NDVGMLQEADI-GVGI-SGVEG----MQAVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 628 ~~iV~~lk~~~~~~v~aiGDG~-ND~~ml~~Adv-GI~i-~g~e~----~~a~~asD~vi~~f~~l~~l 689 (978)
..+.+.+.- ..+.++||||.. +|+.+-+.|++ +|.+ +|... ..+....|+++.+...|.++
T Consensus 192 ~~a~~~l~~-~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~ 259 (261)
T d1vjra_ 192 DVISEKFGV-PKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKA 259 (261)
T ss_dssp HHHHHHHTC-CGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHH
T ss_pred HHHHhhhcc-CchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHH
Confidence 344454543 557899999996 69999999997 4544 23211 11122359999998877766
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=92.43 E-value=0.078 Score=50.63 Aligned_cols=42 Identities=12% Similarity=0.134 Sum_probs=33.6
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCCh----hhHHHHHHHcCcccc
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKM----ETAINIGFACSLLRQ 531 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~----~tA~~ia~~~gl~~~ 531 (978)
+.+++.+.++.+++.|++|+.+||+.. .|+.++-+.+|+...
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~ 132 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPAT 132 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcc
Confidence 457999999999999999999999863 566666666777443
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=92.41 E-value=0.31 Score=48.15 Aligned_cols=72 Identities=13% Similarity=0.145 Sum_probs=46.5
Q ss_pred ccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcC-CHHHhhhccc-cccc-cC---Ccc-chhccccceehhchhh
Q 002029 613 GCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGAN-DVGMLQEADI-GVGI-SG---VEG-MQAVMSSDIAIAQFRF 685 (978)
Q Consensus 613 ~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~N-D~~ml~~Adv-GI~i-~g---~e~-~~a~~asD~vi~~f~~ 685 (978)
.++...++.-+|+--..+.+.+.- ..+.++||||..+ |+.+-++|++ +|.+ +| .+. ..+....|+++.++..
T Consensus 172 ~~~~~~~gKP~p~~~~~al~~l~i-~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e 250 (253)
T d1wvia_ 172 RVKPIIIGKPEAVIMNKALDRLGV-KRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAE 250 (253)
T ss_dssp CCCCEECSTTSHHHHHHHHHHHTS-CGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGG
T ss_pred cceeEEeccCCcccceehhhhccc-cccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHH
Confidence 344445556667666667777754 5578999999976 9999999998 6654 22 111 1111224899877553
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=92.11 E-value=0.055 Score=52.44 Aligned_cols=42 Identities=14% Similarity=0.108 Sum_probs=34.6
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 530 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~ 530 (978)
..++-+|+.+.++.|++.|+++.++|+... +..+....|+..
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~ 130 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTG 130 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGG
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccc
Confidence 456889999999999999999999999754 566667777743
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=91.38 E-value=0.88 Score=43.42 Aligned_cols=161 Identities=13% Similarity=0.145 Sum_probs=90.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
.+-||+.++++.+++. ....++|---..-+.++|..+|+-. + ...+.-+.....+...+....+... +.+
T Consensus 81 ~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~---e-~~~T~~~lD~~~~p~ee~e~ll~i~--~~~--- 150 (308)
T d1y8aa1 81 KFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRG---E-LHGTEVDFDSIAVPEGLREELLSII--DVI--- 150 (308)
T ss_dssp CBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCS---E-EEEEBCCGGGCCCCHHHHHHHHHHH--HHH---
T ss_pred eecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCc---e-eecccccccccCCChHHHHHHHHHh--hhc---
Confidence 3569999999999866 6778888888888999999999931 2 2222222222223222222222111 000
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhH-HHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCC-CeEEEEc
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDV-KDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS-STTLAIG 646 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~-~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~-~~v~aiG 646 (978)
.+ -++..+..++.+-+ +....+++...+.| -...|+.+++..-+..+ ...+.+|
T Consensus 151 -~d------------------~~~eel~e~~d~~f~~~e~~~i~e~Vk~V-----Ggg~k~~i~~~~~~~~~~~~~~~VG 206 (308)
T d1y8aa1 151 -AS------------------LSGEELFRKLDELFSRSEVRKIVESVKAV-----GAGEKAKIMRGYCESKGIDFPVVVG 206 (308)
T ss_dssp -HH------------------CCHHHHHHHHHHHHHSHHHHHHHHTCBCC-----CHHHHHHHHHHHHHHHTCSSCEEEE
T ss_pred -cC------------------ccHHHHHHHHHHHhccchHhhHHhhhccc-----CCchhHHHHHhhcccccCCcceecc
Confidence 00 00011111111100 01122344444544 23567777775543222 4458999
Q ss_pred CCcCCHHHhhhc----cccccccCCccchhccccceehhchhh
Q 002029 647 DGANDVGMLQEA----DIGVGISGVEGMQAVMSSDIAIAQFRF 685 (978)
Q Consensus 647 DG~ND~~ml~~A----dvGI~i~g~e~~~a~~asD~vi~~f~~ 685 (978)
|+..|+.||+.| +++|+..|++- |...||+++..-+.
T Consensus 207 DSITDve~Lr~~r~~gGlaIsFNGN~Y--al~eA~VaiiS~~~ 247 (308)
T d1y8aa1 207 DSISDYKMFEAARGLGGVAIAFNGNEY--ALKHADVVIISPTA 247 (308)
T ss_dssp CSGGGHHHHHHHHHTTCEEEEESCCHH--HHTTCSEEEECSST
T ss_pred CccccHHHHHHHhcCCCeeEEecCccc--cccccceEEeccch
Confidence 999999999988 44455677776 88899999887443
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=89.29 E-value=0.21 Score=47.97 Aligned_cols=53 Identities=13% Similarity=0.309 Sum_probs=38.0
Q ss_pred CCCeEEEEcCCcCCHHHhhhcccc-ccccCCccc---hh----ccccceehhchhhhHHHH
Q 002029 638 TSSTTLAIGDGANDVGMLQEADIG-VGISGVEGM---QA----VMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 638 ~~~~v~aiGDG~ND~~ml~~AdvG-I~i~g~e~~---~a----~~asD~vi~~f~~l~~ll 690 (978)
..+.+++|||+.+|+.+=+.|++- |++.+.... ++ ...+|+++.+++.|..+|
T Consensus 157 ~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll 217 (222)
T d2fdra1 157 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 217 (222)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred CCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHH
Confidence 447899999999999999999874 455433211 01 123899999998887664
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=87.78 E-value=0.21 Score=47.92 Aligned_cols=25 Identities=12% Similarity=0.224 Sum_probs=23.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcC
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTG 513 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTG 513 (978)
++.+++.++++.|+++|+++.++|+
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~ 121 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTN 121 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCccHHHHHHHHHhcCCceEEeec
Confidence 4678999999999999999999996
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=87.42 E-value=0.2 Score=45.99 Aligned_cols=26 Identities=35% Similarity=0.454 Sum_probs=23.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGD 514 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD 514 (978)
++-|+|.++++.|+++|+++.++|..
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred eECccHHHHHHHHHHcCCceeeeccc
Confidence 45799999999999999999999975
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=81.99 E-value=1.3 Score=42.65 Aligned_cols=41 Identities=15% Similarity=0.155 Sum_probs=33.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 530 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~ 530 (978)
.++.+++.+++++|+ |+++.++|+-....+...-...|+..
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~ 132 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTD 132 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccc
Confidence 357789999999885 78999999999988888887777643
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=81.05 E-value=0.71 Score=39.24 Aligned_cols=76 Identities=22% Similarity=0.326 Sum_probs=47.2
Q ss_pred cCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCch
Q 002029 322 AESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADS 401 (978)
Q Consensus 322 ~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~ 401 (978)
+.||..+|+++++++.|..+..- ..+. ..+|++.+ . ..+++ |.+.
T Consensus 26 S~HPlA~AIv~~a~~~~~~~~~~--~~~~-----~~~G~Gi~-----------------------g--~~v~v---G~~~ 70 (113)
T d2b8ea2 26 SEHPIAEAIVKKALEHGIELGEP--EKVE-----VIAGEGVV-----------------------A--DGILV---GNKR 70 (113)
T ss_dssp CCSHHHHHHHHHHHTTTCCCCCC--SCEE-----EETTTEEE-----------------------E--TTEEE---ECHH
T ss_pred CCCchHHHHHHHHHHhcCCCCcc--ccce-----eeccceEE-----------------------e--EEEEE---CcHH
Confidence 57999999999999987644321 1000 01111111 0 12333 8877
Q ss_pred HHHHHhcccchhhHHHHHHHHHHHHHccceeEeeE
Q 002029 402 VMFERLAENGREFEEQTKEHINEYADAGLRTLILA 436 (978)
Q Consensus 402 ~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~A 436 (978)
.+-+. +-...+.+.+.++.+..+|..++.+|
T Consensus 71 ~~~~~----~~~~~~~~~~~~~~~~~~G~T~v~va 101 (113)
T d2b8ea2 71 LMEDF----GVAVSNEVELALEKLEREAKTAVIVA 101 (113)
T ss_dssp HHHHT----TCCCCHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHhc----CCCCCHHHHHHHHHHHhCCCeEEEEE
Confidence 76442 22345577888999999999999999
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.14 E-value=0.85 Score=43.05 Aligned_cols=29 Identities=17% Similarity=0.232 Sum_probs=25.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChh
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKME 517 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ 517 (978)
++.+++.++++.|++.|++++++|+....
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~ 127 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLD 127 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred CCCccHHHHHHHHHhccCccccccccchh
Confidence 36789999999999999999999976544
|