Citrus Sinensis ID: 002064
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 973 | 2.2.26 [Sep-21-2011] | |||||||
| Q8VHC8 | 1007 | Lysosomal alpha-mannosida | yes | no | 0.880 | 0.851 | 0.411 | 0.0 | |
| O09159 | 1013 | Lysosomal alpha-mannosida | yes | no | 0.895 | 0.859 | 0.404 | 0.0 | |
| Q60HE9 | 1012 | Lysosomal alpha-mannosida | N/A | no | 0.879 | 0.845 | 0.409 | 0.0 | |
| O46432 | 1007 | Lysosomal alpha-mannosida | N/A | no | 0.875 | 0.846 | 0.408 | 0.0 | |
| O00754 | 1011 | Lysosomal alpha-mannosida | yes | no | 0.879 | 0.846 | 0.406 | 0.0 | |
| P34098 | 1010 | Lysosomal alpha-mannosida | yes | no | 0.908 | 0.875 | 0.394 | 0.0 | |
| Q29451 | 999 | Lysosomal alpha-mannosida | yes | no | 0.864 | 0.841 | 0.405 | 0.0 | |
| Q8BRK9 | 1152 | Alpha-mannosidase 2x OS=M | no | no | 0.766 | 0.647 | 0.277 | 1e-80 | |
| P49641 | 1150 | Alpha-mannosidase 2x OS=H | no | no | 0.765 | 0.647 | 0.281 | 2e-79 | |
| P27046 | 1150 | Alpha-mannosidase 2 OS=Mu | no | no | 0.751 | 0.635 | 0.279 | 3e-78 |
| >sp|Q8VHC8|MA2B1_CAVPO Lysosomal alpha-mannosidase OS=Cavia porcellus GN=MAN2B1 PE=1 SV=1 | Back alignment and function desciption |
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Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/923 (41%), Positives = 524/923 (56%), Gaps = 66/923 (7%)
Query: 24 AKYRVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSVIP 83
A+ Y T + PG LNVHLVAHTHDDVGWLKTVDQYY G +N +Q A VQ +LDSVI
Sbjct: 45 ARAAGYETCPMVQPGMLNVHLVAHTHDDVGWLKTVDQYYWGIHNDLQQAGVQYILDSVIS 104
Query: 84 ELLADKNRKFIYVEQAFFQRWWDEQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVTHYI 143
LLA+ R+F+YVE AFF RWW +Q+ Q V++LV G+LEF NGG M+DEA THY
Sbjct: 105 ALLAEPTRRFVYVEMAFFSRWWHQQTNETQEVVRRLVRQGRLEFANGGWVMNDEAATHYG 164
Query: 144 DMIDQTTLGHRFIKNEFGV--TPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQD 201
++DQ TLG RF+++ FG PR+ W IDPFGHS QA L +++GFD F+GRIDYQD
Sbjct: 165 AIVDQMTLGLRFLEDTFGSDGRPRVAWHIDPFGHSREQASLF-AQMGFDGVFFGRIDYQD 223
Query: 202 RAKRKNEKSLEVVWQGSRSL-GSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKL 260
+ RK + +E+VW+ S SL +A +F G P NY PP G ++V P + D+ +
Sbjct: 224 KLVRKKRREMELVWRASASLKAPAADLFTGVLPNNYGPPEG-LCWDVLCADPPVVDDPRS 282
Query: 261 FDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMD-- 318
+YN + V+ F+ A +Q RTNH + TMG+DF+Y+ A TWF+ LDK I VNM
Sbjct: 283 PEYNAKKLVSYFLQLATAQGRYYRTNHTVMTMGSDFQYENANTWFKNLDKLIQLVNMQQA 342
Query: 319 --GRVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKV 376
RV+ LYSTP+ Y +N +WP+K DDFFPYAD H +WTGYFSSRPALKRY ++
Sbjct: 343 NGSRVHVLYSTPACYLWELNKANLTWPVKEDDFFPYADGPHMFWTGYFSSRPALKRYERL 402
Query: 377 MSGYYLAARQLEFYIGRSET----GHNTDS-LADALAIAQHHDAVTGTEKQHVANDYAKR 431
+ QLE +G + GH S L A+A+ QHHDAV+GT KQHVA+DYA++
Sbjct: 403 SYNFLQVCNQLEAQVGPAANVGPYGHGDSSPLNQAMAVLQHHDAVSGTSKQHVADDYARQ 462
Query: 432 LAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPLLNISYCPASEIDFSNGKNLV 491
LA G+ E +++ ALA L S F C LNIS CP S+ +
Sbjct: 463 LAAGWGPCEVLLSNALAKLSGSKET---------FLFCRDLNISICPFSQ----TSERFQ 509
Query: 492 IVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRN 551
+++YN LG K + ++R+PV G + + + S +V + N
Sbjct: 510 VLVYNPLGRKVDRMVRLPVRKGLFLIKDPGNNTVPSTVVELTSS--------------GN 555
Query: 552 PMVPPKYWLAFPVSVPPLGFSTYTISSVKRGGGHSIRSSIQTFESSDKSTVEVGQGNLKL 611
P L FP VP LGFS Y+++ V + RS + + + L+
Sbjct: 556 PE------LLFPALVPALGFSVYSVTRVSDQNPQT-RSQHSRPQKYSSPVLSIKNEYLRA 608
Query: 612 IFSSDKS--KPINYINNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIK 669
F D I ++ K + V Q++ +Y A G + ++ Q +GAYIFRP+ +
Sbjct: 609 SFHPDTGLLSMIEVLDRK--LTLPVNQAFFWYNASVG-DKRSSQASGAYIFRPSQQWPFP 665
Query: 670 SEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVT 729
+++ ++ EVHQ W QV RLY G+ H+E+E+ VGPIPV D GKE+++
Sbjct: 666 VSHLARTRLVKTALVQEVHQNFTAWCSQVVRLYSGQRHLELEWTVGPIPVGDKWGKEIIS 725
Query: 730 HITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEF 789
+ LET F+TDSNGR+ ++R RDYR W L EPVAGNYYP+N IY+ D K +
Sbjct: 726 RFDTPLETGGVFFTDSNGREVLERRRDYRPSWKLNQTEPVAGNYYPVNSRIYITDGKMQL 785
Query: 790 SLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFR 849
++L DR+ GGSS+ DG +ELM+HRRLL DD RGV EAL E G ++G++
Sbjct: 786 TVLTDRSQGGSSMSDGSLELMVHRRLLKDDGRGVGEALQEPG------SGGWVRGRHLLL 839
Query: 850 IDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSH-----VTTFSGIDSSYSLPDNV 904
+DT + A R ++ P L G S+ + H FSG+ LP +V
Sbjct: 840 LDTAREAAAEHRLLAEKELLAPQLVLAPGQGPSYHHDHHEAVPRKQFSGLRR--QLPPSV 897
Query: 905 AIITLQELDDGKILLRLAHLYQV 927
++TL +LLRL H + +
Sbjct: 898 RLLTLARWGPDTLLLRLEHQFAL 920
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Necessary for the catabolism of N-linked carbohydrates released during glycoprotein turnover. Cavia porcellus (taxid: 10141) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 4 |
| >sp|O09159|MA2B1_MOUSE Lysosomal alpha-mannosidase OS=Mus musculus GN=Man2b1 PE=2 SV=4 | Back alignment and function description |
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| >sp|Q60HE9|MA2B1_MACFA Lysosomal alpha-mannosidase OS=Macaca fascicularis GN=MAN2B1 PE=2 SV=1 | Back alignment and function description |
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| >sp|O46432|MA2B1_FELCA Lysosomal alpha-mannosidase OS=Felis catus GN=MAN2B1 PE=2 SV=1 | Back alignment and function description |
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| >sp|O00754|MA2B1_HUMAN Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN2B1 PE=1 SV=3 | Back alignment and function description |
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| >sp|P34098|MANA_DICDI Lysosomal alpha-mannosidase OS=Dictyostelium discoideum GN=manA PE=1 SV=2 | Back alignment and function description |
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| >sp|Q29451|MA2B1_BOVIN Lysosomal alpha-mannosidase OS=Bos taurus GN=MAN2B1 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q8BRK9|MA2A2_MOUSE Alpha-mannosidase 2x OS=Mus musculus GN=Man2a2 PE=2 SV=2 | Back alignment and function description |
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| >sp|P49641|MA2A2_HUMAN Alpha-mannosidase 2x OS=Homo sapiens GN=MAN2A2 PE=2 SV=3 | Back alignment and function description |
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| >sp|P27046|MA2A1_MOUSE Alpha-mannosidase 2 OS=Mus musculus GN=Man2a1 PE=1 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 973 | ||||||
| 224131400 | 1009 | predicted protein [Populus trichocarpa] | 0.918 | 0.886 | 0.789 | 0.0 | |
| 440546588 | 1024 | alpha-mannosidase [Prunus persica] | 0.940 | 0.893 | 0.780 | 0.0 | |
| 356561171 | 1030 | PREDICTED: lysosomal alpha-mannosidase-l | 0.929 | 0.877 | 0.780 | 0.0 | |
| 357508425 | 1082 | Lysosomal alpha-mannosidase [Medicago tr | 0.937 | 0.842 | 0.745 | 0.0 | |
| 449452024 | 1020 | PREDICTED: lysosomal alpha-mannosidase-l | 0.943 | 0.9 | 0.767 | 0.0 | |
| 359488553 | 1025 | PREDICTED: lysosomal alpha-mannosidase-l | 0.942 | 0.894 | 0.758 | 0.0 | |
| 255543555 | 977 | lysosomal alpha-mannosidase, putative [R | 0.905 | 0.901 | 0.758 | 0.0 | |
| 255540059 | 1012 | lysosomal alpha-mannosidase, putative [R | 0.947 | 0.911 | 0.713 | 0.0 | |
| 356561173 | 986 | PREDICTED: lysosomal alpha-mannosidase-l | 0.883 | 0.872 | 0.745 | 0.0 | |
| 356508869 | 1011 | PREDICTED: lysosomal alpha-mannosidase-l | 0.940 | 0.905 | 0.731 | 0.0 |
| >gi|224131400|ref|XP_002321075.1| predicted protein [Populus trichocarpa] gi|222861848|gb|EEE99390.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 1531 bits (3965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 717/908 (78%), Positives = 813/908 (89%), Gaps = 14/908 (1%)
Query: 21 CVQAKYRVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDS 80
V+AKY VYNTSQGIV K+NVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDS
Sbjct: 20 VVEAKYMVYNTSQGIVKDKINVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDS 79
Query: 81 VIPELLADKNRKFIYVEQAFFQRWWDEQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVT 140
+IP LLADKNRKFIY AFFQRWW +QSE MQH VKQLV SGQLEFINGGMCMHDEAVT
Sbjct: 80 LIPALLADKNRKFIY---AFFQRWWRDQSETMQHVVKQLVSSGQLEFINGGMCMHDEAVT 136
Query: 141 HYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQ 200
HYIDMIDQTTLGHRFIK +FGVTPR+GWQIDPFGHSAVQAY+LG+E+GFDS F+GRIDYQ
Sbjct: 137 HYIDMIDQTTLGHRFIKKDFGVTPRVGWQIDPFGHSAVQAYMLGAEIGFDSLFFGRIDYQ 196
Query: 201 DRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKL 260
DRAKRKNEKSLEVVWQ S+S GSSAQIFAGAFPE+YEPPPGGFYFEVND P++QD+I L
Sbjct: 197 DRAKRKNEKSLEVVWQASKSFGSSAQIFAGAFPEHYEPPPGGFYFEVNDPSPVVQDDINL 256
Query: 261 FDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMDGR 320
FDYNVQ+RV+DFVAAA+SQANITRTNHIMWTMGTDFKYQYA +WFRQ+DK IHYVNMDGR
Sbjct: 257 FDYNVQERVDDFVAAAVSQANITRTNHIMWTMGTDFKYQYAHSWFRQMDKLIHYVNMDGR 316
Query: 321 VNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGY 380
VNALYSTPSIYTDAK+A+NE WP+KT DFFPYADRA+ YWTGYF+SRPALKRYV++MSGY
Sbjct: 317 VNALYSTPSIYTDAKHATNEHWPVKTGDFFPYADRANGYWTGYFASRPALKRYVRMMSGY 376
Query: 381 YLAARQLEFYIGRSETGHNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAE 440
YLAARQLEFY GRS G NTDSLAD+LAIAQHHDAVTGTEKQHVANDYAKRL+IGYTEAE
Sbjct: 377 YLAARQLEFYNGRSNRGPNTDSLADSLAIAQHHDAVTGTEKQHVANDYAKRLSIGYTEAE 436
Query: 441 EVVATALACLVDSPSDNGCGRSTTRFQQCPLLNISYCPASEIDFSNGKNLVIVIYNSLGW 500
++VA++LACLV+S S GC RSTT+FQQ +++D S G+NL++V+YN+LGW
Sbjct: 437 KLVASSLACLVESASHTGCQRSTTKFQQA---------KTQVDLSQGRNLIVVVYNALGW 487
Query: 501 KREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMVPPKYWL 560
R+D+I+ PV N +V V +SE + I SQ++P ADAF+ LR+ +V AYLGR+P+ PKYWL
Sbjct: 488 ARDDVIQFPVFNENVIVHDSEKREIVSQIIPIADAFVGLRNSHVNAYLGRSPVGTPKYWL 547
Query: 561 AFPVSVPPLGFSTYTISSVKRGGGHSIRSSIQTFESSDKSTVEVGQGNLKLIFSSDKSKP 620
AFPVSVPP GFSTY+ISS KR G HS +SS+ T S+KS VEVGQGNLKL FS+DK K
Sbjct: 548 AFPVSVPPFGFSTYSISSAKRAGAHSSKSSVYTLR-SEKSAVEVGQGNLKLTFSADKIKH 606
Query: 621 INYINNKSLVEESVEQSYSFYPAYNGT-NDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVM 679
NY+N++S V+ESVEQ++SFY YNGT NDK PQN+GAYIFRPNGTF I E QVPLTVM
Sbjct: 607 ANYVNSRSSVKESVEQTFSFYAGYNGTGNDKDPQNSGAYIFRPNGTFPINPESQVPLTVM 666
Query: 680 RGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNK 739
RGP+LDEVHQ++++WIYQ+TRLYKG+EHVEVEFIVGPIP++DG+GKEV T IT+T+ETNK
Sbjct: 667 RGPVLDEVHQQVSQWIYQITRLYKGREHVEVEFIVGPIPIEDGIGKEVATQITTTMETNK 726
Query: 740 TFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGG 799
TFYTDSNGRDFIKRIRDYR DWDLEVN+P AGNYYPINLGIY QD KKEFS+LVDRALGG
Sbjct: 727 TFYTDSNGRDFIKRIRDYRADWDLEVNQPFAGNYYPINLGIYFQDDKKEFSVLVDRALGG 786
Query: 800 SSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKW 859
SS+VDG++ELMLHRRLLLDDSRGVAEALNET CVLD+CKGLTIQGKYY+RID IG+GAKW
Sbjct: 787 SSLVDGQIELMLHRRLLLDDSRGVAEALNETVCVLDQCKGLTIQGKYYYRIDPIGEGAKW 846
Query: 860 RRTFGQEIYSPPLLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNVAIITLQELDDGKILL 919
RR+FGQEIYSP LLAF+EEDGD+W NSHVTTFSG DSSY LPDNVA++TLQELDDGK+LL
Sbjct: 847 RRSFGQEIYSPLLLAFSEEDGDNWMNSHVTTFSGFDSSYILPDNVAVLTLQELDDGKVLL 906
Query: 920 RLAHLYQV 927
RLAHLY++
Sbjct: 907 RLAHLYEM 914
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|440546588|gb|AGC10269.1| alpha-mannosidase [Prunus persica] | Back alignment and taxonomy information |
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| >gi|356561171|ref|XP_003548858.1| PREDICTED: lysosomal alpha-mannosidase-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
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| >gi|357508425|ref|XP_003624501.1| Lysosomal alpha-mannosidase [Medicago truncatula] gi|355499516|gb|AES80719.1| Lysosomal alpha-mannosidase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|449452024|ref|XP_004143760.1| PREDICTED: lysosomal alpha-mannosidase-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|359488553|ref|XP_002276092.2| PREDICTED: lysosomal alpha-mannosidase-like [Vitis vinifera] gi|296082271|emb|CBI21276.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255543555|ref|XP_002512840.1| lysosomal alpha-mannosidase, putative [Ricinus communis] gi|223547851|gb|EEF49343.1| lysosomal alpha-mannosidase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|255540059|ref|XP_002511094.1| lysosomal alpha-mannosidase, putative [Ricinus communis] gi|223550209|gb|EEF51696.1| lysosomal alpha-mannosidase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356561173|ref|XP_003548859.1| PREDICTED: lysosomal alpha-mannosidase-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356508869|ref|XP_003523176.1| PREDICTED: lysosomal alpha-mannosidase-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 973 | ||||||
| TAIR|locus:2159143 | 1024 | AT5G13980 [Arabidopsis thalian | 0.937 | 0.890 | 0.707 | 0.0 | |
| TAIR|locus:2090817 | 1019 | AT3G26720 [Arabidopsis thalian | 0.944 | 0.901 | 0.653 | 0.0 | |
| TAIR|locus:2156857 | 1047 | AT5G66150 [Arabidopsis thalian | 0.946 | 0.879 | 0.564 | 1.4e-293 | |
| ZFIN|ZDB-GENE-050327-52 | 982 | man2b1 "mannosidase, alpha, cl | 0.540 | 0.535 | 0.454 | 9.7e-185 | |
| UNIPROTKB|F1PKB2 | 1007 | MAN2B1 "Uncharacterized protei | 0.519 | 0.501 | 0.447 | 1.5e-175 | |
| RGD|3039 | 1009 | Man2b1 "mannosidase, alpha, cl | 0.506 | 0.488 | 0.45 | 1.1e-174 | |
| MGI|MGI:107286 | 1013 | Man2b1 "mannosidase 2, alpha B | 0.500 | 0.480 | 0.453 | 1.4e-174 | |
| UNIPROTKB|G5E928 | 1010 | MAN2B1 "Mannosidase, alpha, cl | 0.520 | 0.500 | 0.443 | 7.5e-174 | |
| UNIPROTKB|O00754 | 1011 | MAN2B1 "Lysosomal alpha-mannos | 0.520 | 0.500 | 0.442 | 2.5e-173 | |
| UNIPROTKB|F1SEY1 | 1008 | MAN2B1 "Uncharacterized protei | 0.509 | 0.492 | 0.451 | 2.3e-170 |
| TAIR|locus:2159143 AT5G13980 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3540 (1251.2 bits), Expect = 0., P = 0.
Identities = 653/923 (70%), Positives = 776/923 (84%)
Query: 9 LYYVIAFIAITSCVQAKYRVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNS 68
L +++ + I S V+++Y VYNTS IVPGKLNVH+V H+HDDVGWLKTVDQYYVGSNNS
Sbjct: 7 LCWIVLLLGI-SLVESRYMVYNTSHTIVPGKLNVHVVPHSHDDVGWLKTVDQYYVGSNNS 65
Query: 69 IQGACVQNVLDSVIPELLADKNRKFIYVEQAFFQRWWDEQSEAMQHEVKQLVGSGQLEFI 128
IQ ACVQNVLDS++P LLADKNRKFIYVEQAFFQRWW+EQSE ++ VK+L+ SGQLE I
Sbjct: 66 IQVACVQNVLDSIVPALLADKNRKFIYVEQAFFQRWWNEQSEEIKRIVKELIHSGQLELI 125
Query: 129 NGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVG 188
NGGMCMHDEA HYIDMIDQTTLGHRFI EF VTPRIGWQIDPFGHSAVQAYLLG+EVG
Sbjct: 126 NGGMCMHDEAAPHYIDMIDQTTLGHRFIIREFNVTPRIGWQIDPFGHSAVQAYLLGAEVG 185
Query: 189 FDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPENYEPPPGGFYFEVN 248
FDS F+GRIDYQDR KR EK+LEV+W+GS+SLGSS+QIFAGAFP NYEPPPGGFY+E+
Sbjct: 186 FDSVFFGRIDYQDREKRYKEKTLEVIWRGSKSLGSSSQIFAGAFPTNYEPPPGGFYYEIT 245
Query: 249 DKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQL 308
D P++QD+ LFDYNVQ+RVN FVAAA+ QANITR NHIM+TMGTDF+YQYA TW+RQ+
Sbjct: 246 DDSPVVQDDPDLFDYNVQERVNAFVAAALDQANITRINHIMFTMGTDFRYQYAHTWYRQM 305
Query: 309 DKFIHYVNMDGRVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRP 368
DK IHYVN+DGRVNA YSTPSIYTDAK+A+NE+WPLKT+D+FPYADR +AYWTGYF+SRP
Sbjct: 306 DKLIHYVNLDGRVNAFYSTPSIYTDAKHAANEAWPLKTEDYFPYADRINAYWTGYFTSRP 365
Query: 369 ALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADALAIAQHHDAVTGTEKQHVANDY 428
ALKRYV+VMS YYLAARQLEF+ GRS+ G NTDSLADALAIAQHHDAV+GT KQHVANDY
Sbjct: 366 ALKRYVRVMSAYYLAARQLEFFKGRSQKGPNTDSLADALAIAQHHDAVSGTSKQHVANDY 425
Query: 429 AKRLAIGYXXXXXXXXXXLACLVD-SPSDNGCGRSTTRFQQCPLLNISYCPASEIDFSNG 487
AKRLAIGY LA L P+ N FQQC LLNISYCP+SE++ S+G
Sbjct: 426 AKRLAIGYVEAESVVATSLAHLTKVDPTLN------PTFQQCLLLNISYCPSSEVNLSDG 479
Query: 488 KNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAY 547
K+L+++ YN LGWKR DI+R+PV GDV+V +SEG +ESQLVP D ++ LR Y+V AY
Sbjct: 480 KSLIVLAYNPLGWKRVDIVRLPVVGGDVSVHDSEGHEVESQLVPFTDEYVALRKYHVEAY 539
Query: 548 LGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVKRGGGHSIRSSIQTFESSDKSTVEVGQG 607
LG++P PKYWL F V+VPPLGF+TYTIS+ K+ G+S +S + ++S + +G G
Sbjct: 540 LGQSPTQVPKYWLVFSVTVPPLGFTTYTISTAKKTDGYSSKSYVSNILKGEQSIINIGHG 599
Query: 608 NLKLIFSSDKSKPINYINNKSLVEESVEQSYSFYPAYNGTNDKAP---QNAGAYIFRPNG 664
+LKL FS+D+ INY+N ++ + E V+Q++S+Y AYNG+NDK P QN+GAY+FRPNG
Sbjct: 600 HLKLSFSTDQGTAINYVNGRTSMTEPVKQTFSYYSAYNGSNDKEPLIPQNSGAYVFRPNG 659
Query: 665 TFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLG 724
TF I EGQVPLTV+ GP++DEVHQ+IN WI Q+TR+YKGKEHVEVEFIVG IP+DDG+G
Sbjct: 660 TFPINPEGQVPLTVIHGPLVDEVHQQINPWISQITRVYKGKEHVEVEFIVGNIPIDDGIG 719
Query: 725 KEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQD 784
KEVVT I+S+L++NKTFYTDS+GRD+IKRIRDYR+DW L+VN+P+AGNYYPIN GIY+QD
Sbjct: 720 KEVVTQISSSLKSNKTFYTDSSGRDYIKRIRDYRSDWKLDVNQPIAGNYYPINHGIYLQD 779
Query: 785 VKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQG 844
KKEFS++VDRA GGSSIVDG+VELMLHRRLLLDDSRGVAE LNET CV D+C GLTIQG
Sbjct: 780 SKKEFSVMVDRAFGGSSIVDGQVELMLHRRLLLDDSRGVAENLNETVCVQDKCTGLTIQG 839
Query: 845 KYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNV 904
KYY+RID G+GAKWRRTFGQEIYSP LLAF ++D + +FSGID SYSLPDNV
Sbjct: 840 KYYYRIDPYGEGAKWRRTFGQEIYSPLLLAFAQQDDGKPMSFGAASFSGIDPSYSLPDNV 899
Query: 905 AIITLQELDDGKILLRLAHLYQV 927
A++TLQELDDG +LLRLAHLY+V
Sbjct: 900 ALLTLQELDDGNVLLRLAHLYEV 922
|
|
| TAIR|locus:2090817 AT3G26720 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2156857 AT5G66150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-050327-52 man2b1 "mannosidase, alpha, class 2B, member 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PKB2 MAN2B1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| RGD|3039 Man2b1 "mannosidase, alpha, class 2B, member 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:107286 Man2b1 "mannosidase 2, alpha B1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G5E928 MAN2B1 "Mannosidase, alpha, class 2B, member 1, isoform CRA_a" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|O00754 MAN2B1 "Lysosomal alpha-mannosidase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1SEY1 MAN2B1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| O00754 | MA2B1_HUMAN | 3, ., 2, ., 1, ., 2, 4 | 0.4065 | 0.8797 | 0.8466 | yes | no |
| Q8VHC8 | MA2B1_CAVPO | 3, ., 2, ., 1, ., 2, 4 | 0.4117 | 0.8807 | 0.8510 | yes | no |
| P34098 | MANA_DICDI | 3, ., 2, ., 1, ., 2, 4 | 0.3948 | 0.9085 | 0.8752 | yes | no |
| Q29451 | MA2B1_BOVIN | 3, ., 2, ., 1, ., 2, 4 | 0.4052 | 0.8643 | 0.8418 | yes | no |
| O09159 | MA2B1_MOUSE | 3, ., 2, ., 1, ., 2, 4 | 0.4047 | 0.8951 | 0.8598 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.2.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 973 | |||
| cd10810 | 278 | cd10810, GH38N_AMII_LAM_like, N-terminal catalytic | 1e-178 | |
| cd00451 | 258 | cd00451, GH38N_AMII_euk, N-terminal catalytic doma | 1e-105 | |
| PLN02701 | 1050 | PLN02701, PLN02701, alpha-mannosidase | 1e-102 | |
| pfam01074 | 269 | pfam01074, Glyco_hydro_38, Glycosyl hydrolases fam | 1e-92 | |
| cd10809 | 340 | cd10809, GH38N_AMII_GMII_SfManIII_like, N-terminal | 3e-70 | |
| cd10811 | 326 | cd10811, GH38N_AMII_Epman_like, N-terminal catalyt | 2e-59 | |
| cd11666 | 344 | cd11666, GH38N_Man2A1, N-terminal catalytic domain | 2e-56 | |
| cd11667 | 344 | cd11667, GH38N_Man2A2, N-terminal catalytic domain | 1e-55 | |
| cd10786 | 251 | cd10786, GH38N_AMII_like, N-terminal catalytic dom | 2e-49 | |
| pfam07748 | 379 | pfam07748, Glyco_hydro_38C, Glycosyl hydrolases fa | 4e-37 | |
| smart00872 | 79 | smart00872, Alpha-mann_mid, Alpha mannosidase, mid | 2e-21 | |
| pfam09261 | 82 | pfam09261, Alpha-mann_mid, Alpha mannosidase, midd | 2e-20 | |
| cd10789 | 252 | cd10789, GH38N_AMII_ER_cytosolic, N-terminal catal | 2e-11 | |
| cd10812 | 258 | cd10812, GH38N_AMII_ScAms1_like, N-terminal cataly | 0.001 | |
| cd10813 | 252 | cd10813, GH38N_AMII_Man2C1, N-terminal catalytic d | 0.001 | |
| cd10791 | 254 | cd10791, GH38N_AMII_like_1, N-terminal catalytic d | 0.002 |
| >gnl|CDD|212121 cd10810, GH38N_AMII_LAM_like, N-terminal catalytic domain of lysosomal alpha-mannosidase and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
Score = 516 bits (1332), Expect = e-178
Identities = 175/280 (62%), Positives = 204/280 (72%), Gaps = 4/280 (1%)
Query: 40 LNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSVIPELLADKNRKFIYVEQA 99
LNVHLV HTHDDVGWLKTVDQYY GSNNSIQ A VQ +LDSVI ELL + +RKFIYVE A
Sbjct: 1 LNVHLVPHTHDDVGWLKTVDQYYYGSNNSIQHAGVQYILDSVIEELLKNPDRKFIYVEIA 60
Query: 100 FFQRWWDEQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNE 159
FF RWW EQSE + +VK+LV +GQLEFINGG CM+DEA THY D+IDQ TLGH+F+K+
Sbjct: 61 FFSRWWREQSEDTRQKVKKLVKNGQLEFINGGWCMNDEATTHYEDIIDQMTLGHQFLKDT 120
Query: 160 FGV--TPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVWQG 217
FG PR+GWQIDPFGHS QA L GFD F+GRIDYQD+A+R K +E +W+G
Sbjct: 121 FGECARPRVGWQIDPFGHSRTQASLFAQM-GFDGLFFGRIDYQDKAQRLKNKEMEFIWRG 179
Query: 218 SRSLGSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAI 277
S SLG A IF G +Y PPP GF F++ IQD+ L DYNV +RV+DFV A
Sbjct: 180 SPSLGPDADIFTGVLYNHYGPPP-GFCFDILCGDEPIQDDPNLEDYNVDERVDDFVQYAK 238
Query: 278 SQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNM 317
QA RTNHIM TMG+DF+YQ A WF+ +DK I YVN
Sbjct: 239 EQAQHYRTNHIMLTMGSDFQYQNAEMWFKNMDKLIKYVNK 278
|
The subfamily is represented by lysosomal alpha-mannosidase (LAM, Man2B1, EC 3.2.1.114), which is a broad specificity exoglycosidase hydrolyzing all known alpha 1,2-, alpha 1,3-, and alpha 1,6-mannosidic linkages from numerous high mannose type oligosaccharides. LAM is expressed in all tissues and in many species. In mammals, the absence of LAM can cause the autosomal recessive disease alpha-mannosidosis. LAM has an acidic pH optimum at 4.0-4.5. It is stimulated by zinc ion and is inhibited by cobalt ion and plant alkaloids, such as swainsonine (SW). LAM catalyzes hydrolysis by a double displacement mechanism in which a glycosyl-enzyme intermediate is formed and hydrolyzed via oxacarbenium ion-like transition states. A carboxylic acid in the active site acts as the catalytic nucleophile in the formation of the covalent intermediate while a second carboxylic acid acts as a general acid catalyst. The same residue is thought to assist in the hydrolysis (deglycosylation) step, this time acting as a general base. Length = 278 |
| >gnl|CDD|212095 cd00451, GH38N_AMII_euk, N-terminal catalytic domain of eukaryotic class II alpha-mannosidases; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|178304 PLN02701, PLN02701, alpha-mannosidase | Back alignment and domain information |
|---|
| >gnl|CDD|216284 pfam01074, Glyco_hydro_38, Glycosyl hydrolases family 38 N-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|212120 cd10809, GH38N_AMII_GMII_SfManIII_like, N-terminal catalytic domain of Golgi alpha-mannosidase II, Spodoptera frugiperda Sf9 alpha-mannosidase III, and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212122 cd10811, GH38N_AMII_Epman_like, N-terminal catalytic domain of mammalian core-specific lysosomal alpha 1,6-mannosidase and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212131 cd11666, GH38N_Man2A1, N-terminal catalytic domain of Golgi alpha-mannosidase II and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212132 cd11667, GH38N_Man2A2, N-terminal catalytic domain of Golgi alpha-mannosidase IIx, and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212098 cd10786, GH38N_AMII_like, N-terminal catalytic domain of class II alpha-mannosidases and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|219551 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases family 38 C-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|214875 smart00872, Alpha-mann_mid, Alpha mannosidase, middle domain | Back alignment and domain information |
|---|
| >gnl|CDD|220157 pfam09261, Alpha-mann_mid, Alpha mannosidase, middle domain | Back alignment and domain information |
|---|
| >gnl|CDD|212101 cd10789, GH38N_AMII_ER_cytosolic, N-terminal catalytic domain of endoplasmic reticulum(ER)/cytosolic class II alpha-mannosidases; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212123 cd10812, GH38N_AMII_ScAms1_like, N-terminal catalytic domain of yeast vacuolar alpha-mannosidases and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212124 cd10813, GH38N_AMII_Man2C1, N-terminal catalytic domain of mammalian cytosolic alpha-mannosidase Man2C1 and similar proteins; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
| >gnl|CDD|212103 cd10791, GH38N_AMII_like_1, N-terminal catalytic domain of mainly uncharacterized eukaryotic proteins similar to alpha-mannosidases; glycoside hydrolase family 38 (GH38) | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 973 | |||
| KOG1959 | 996 | consensus Glycosyl hydrolase, family 38 - alpha-ma | 100.0 | |
| PLN02701 | 1050 | alpha-mannosidase | 100.0 | |
| KOG1958 | 1129 | consensus Glycosyl hydrolase, family 38 - alpha-ma | 100.0 | |
| PRK09819 | 875 | alpha-mannosidase; Provisional | 100.0 | |
| KOG4342 | 1078 | consensus Alpha-mannosidase [Carbohydrate transpor | 100.0 | |
| PF01074 | 275 | Glyco_hydro_38: Glycosyl hydrolases family 38 N-te | 100.0 | |
| COG0383 | 943 | AMS1 Alpha-mannosidase [Carbohydrate transport and | 100.0 | |
| PF07748 | 457 | Glyco_hydro_38C: Glycosyl hydrolases family 38 C-t | 100.0 | |
| PF09261 | 80 | Alpha-mann_mid: Alpha mannosidase, middle domain; | 99.83 | |
| smart00872 | 79 | Alpha-mann_mid Alpha mannosidase, middle domain. M | 99.8 | |
| COG0383 | 943 | AMS1 Alpha-mannosidase [Carbohydrate transport and | 99.77 | |
| PF03065 | 360 | Glyco_hydro_57: Glycosyl hydrolase family 57; Inte | 98.36 | |
| COG1543 | 504 | Uncharacterized conserved protein [Function unknow | 95.93 | |
| PF01522 | 123 | Polysacc_deac_1: Polysaccharide deacetylase; Inter | 95.27 | |
| COG1449 | 615 | Alpha-amylase/alpha-mannosidase [Carbohydrate tran | 94.82 | |
| TIGR02764 | 191 | spore_ybaN_pdaB polysaccharide deacetylase family | 93.53 | |
| TIGR03212 | 297 | uraD_N-term-dom putative urate catabolism protein. | 92.89 | |
| TIGR02884 | 224 | spore_pdaA delta-lactam-biosynthetic de-N-acetylas | 92.25 | |
| TIGR03006 | 265 | pepcterm_polyde polysaccharide deactylase family p | 89.11 | |
| TIGR02873 | 268 | spore_ylxY probable sporulation protein, polysacch | 88.86 | |
| PRK14582 | 671 | pgaB outer membrane N-deacetylase; Provisional | 85.53 | |
| PRK14581 | 672 | hmsF outer membrane N-deacetylase; Provisional | 82.92 |
| >KOG1959 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-217 Score=1827.23 Aligned_cols=895 Identities=52% Similarity=0.865 Sum_probs=811.6
Q ss_pred cchhhHHHHHHHHHHHhhccccceeeEecCCCCCCCCceEEEEEecccCCCcchhhhhhheecCCCcchhHHHHHHHHHH
Q 002064 2 MTLKGLLLYYVIAFIAITSCVQAKYRVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSV 81 (973)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~VhlVpHSH~D~gWl~T~dey~~g~~~~i~~~~v~~il~~v 81 (973)
|.|...+++.++++++ +.... .++.|++|+...+++++||||||||+|+|||||+||||+|++|.||++.|++|||+|
T Consensus 1 ~~l~~~~~~l~~l~ll-i~~~~-~~~~y~t~~~~~~~~invHlVPHSHDDVGWLKTVDQyy~G~~n~Iq~AgVqyIldSV 78 (996)
T KOG1959|consen 1 MALNKFLLFLCLLLLL-ISLVE-SRAGYNTCHKVVPNMINVHLVPHSHDDVGWLKTVDQYYYGSKNKIQHAGVQYILDSV 78 (996)
T ss_pred CCcccchHHHHHHHHH-HHHHh-HhhccCCCccccCceeEEEecCCccCccceeeeehhheecCCcccchhhHHHHHHHH
Confidence 4555555555533333 33322 555599999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCeEEEechhhHHHHHHhcCHHHHHHHHHHHhCCcEEEEcceeeeecccCCChHHHHHHHHHHHHHHHHHhC
Q 002064 82 IPELLADKNRKFIYVEQAFFQRWWDEQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFG 161 (973)
Q Consensus 82 i~~L~~~p~~kF~~~e~~~f~~Ww~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~esiIrql~~G~~~l~~~fG 161 (973)
|++|.+||+|||+++|++||.+||.+|++++|+.||+||++||||||||||||||||++||.++|+||++||+||.++||
T Consensus 79 V~eLl~dp~RRFI~VE~aFF~rWW~~qS~~~k~~Vk~LV~~GrLEFi~Ggw~MnDEA~~hY~dvIDQ~TlGlrfL~~tFG 158 (996)
T KOG1959|consen 79 VEELLKDPNRRFIYVETAFFARWWNEQSETQKEQVKKLVNEGRLEFIGGGWSMNDEATTHYQDVIDQFTLGLRFLKDTFG 158 (996)
T ss_pred HHHHhcCCccceehhhHHHHHHHHHhcCHHHHHHHHHHHhcCCEEEecCeeeecchhhhhHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred --CCCcceeecCCCCCChhhHHHHhhhcCCcEEEEeccchhhhhhhccCCcceEEEecCCCCCCCceeEEeecCCCCCCC
Q 002064 162 --VTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPENYEPP 239 (973)
Q Consensus 162 --~~p~vgW~iDpFGhS~~~p~ll~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~I~th~~~~~Y~~p 239 (973)
.+|++||||||||||+.||+|| |+|||++++|+||||+||+.|..++.|||+|+|++++++.++|||++||+||++|
T Consensus 159 ~cgrPrvgWqIDPFGHSreqAslf-AqmGfd~~fFaRiDy~dK~~R~~~~~lE~iW~~S~sL~~~~~iFTg~l~n~Y~~P 237 (996)
T KOG1959|consen 159 ECGRPRVGWQIDPFGHSREQASLF-AQMGFDGVFFARIDYQDKAKRMKEKTLEMIWRGSESLGSSSQIFTGALYNHYSPP 237 (996)
T ss_pred ccCCcceeeeeCCCCcchHHHHHH-HHhCccchheeecchhhHHHHHhhccceEEeecCccccchhhhhhhccccCCCCC
Confidence 8999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCCCCccccCcccccccHHHHHHHHHHHHHHhccccCCCeEEEeccCCccccchHHHHHHHHHHHHHHhcC-
Q 002064 240 PGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMD- 318 (973)
Q Consensus 240 ~~~f~f~~~~~~~p~~d~~~i~~~nv~~r~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~f~n~~kli~~~N~~- 318 (973)
+|||||.+|.+.|++|++.+.+|||++|++.|++.++.++.+|+|||||+|||+||+|.+|..||+||||||+|+|+.
T Consensus 238 -~gfc~dv~c~d~Pi~D~~~~~d~NVkerVd~Fv~~a~~~a~~~RtnHim~~MG~DFqY~~A~v~fknmDkLI~yVN~~q 316 (996)
T KOG1959|consen 238 -PGFCFDVLCGDDPIIDGPRSYDYNVKERVDDFVAYAKNQAAYYRTNHIMWPMGDDFQYENANVWFKNMDKLIKYVNERQ 316 (996)
T ss_pred -CCceeccccCCCCCCCCCCCCCccHHHHHHHHHHHHHHhHhheecceEEEeccCCceehhhhHHHhhHHHHHHHhhhhh
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999999943
Q ss_pred --C-CeEEEEcChhhHHHHHHhcCCCCCCcCCCCccccccCCCcccceeechhhHHHHHHHHHHHHHHHHHHHHhhccCC
Q 002064 319 --G-RVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSE 395 (973)
Q Consensus 319 --~-~~~i~~sT~~~Yf~al~~~~~~~p~~~gDffpy~~~~~~yWtGyyTSRp~~K~~~R~~e~~L~~ae~l~~l~~~~~ 395 (973)
+ .+++.||||+||++++++.+..||+++.|||||++++|+||||||||||.+|++.|+++++|++|+||++|+++..
T Consensus 317 a~gs~vnv~YSTpscYl~alh~~~~Twp~Kt~DFFPYa~~~~syWTGyFTSRPa~Kr~~R~~s~~lq~akQL~~la~l~~ 396 (996)
T KOG1959|consen 317 ADGSKVNVFYSTPSCYLNALHAANQTWPVKTDDFFPYASEPHSYWTGYFTSRPALKRFERDGSHYLQVAKQLSVLAGLSS 396 (996)
T ss_pred cCCceEEEEEcChHHHHHHHHHhcCcccccccccCcCCCCCCcceeeeccccHHHHHHHhhhhHHHHHHHHHhhhcCCCc
Confidence 4 7999999999999999999999999999999999999999999999999999999999999999999999998653
Q ss_pred --CCCchHHHHHHHHHhcccccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccccccc
Q 002064 396 --TGHNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPLLN 473 (973)
Q Consensus 396 --~~~~~~~lw~~l~l~QhHDaItGTs~~~V~~Dy~~rL~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~ln 473 (973)
..+.++.|+++|++.|||||||||+|++|.+||.++|..|+..|+.+++.+|+.|.... ..+|++|.+||
T Consensus 397 ~~~~~dl~~Lream~i~QHHDAVTGTekq~Va~DY~r~La~g~~~~e~~~~~aL~~lt~~~--------~~~f~~C~~lN 468 (996)
T KOG1959|consen 397 TEQGPDLDYLREAMAIMQHHDAVTGTEKQHVADDYARRLADGILGAEKLARDALRKLTNLP--------NGEFQSCLLLN 468 (996)
T ss_pred cccCccHHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC--------Cccchhhhhhc
Confidence 56789999999999999999999999999999999999999999999999999998653 34799999999
Q ss_pred cccCCCcccccCCCCeEEEEEEcCCCceEEEEEEEEEecCcEEEEecCCCeEEEEEeCCCccccchhhhhhhhccCCCCC
Q 002064 474 ISYCPASEIDFSNGKNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPM 553 (973)
Q Consensus 474 ~s~c~~~~~~~~~~~~~~vvvfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~ 553 (973)
+|+||.+++ .++++.|++||||+|.++++|+|||..+++.|.|+.|++|++|++|.......+. ...
T Consensus 469 iS~C~~t~~---~~~~~~v~~YNpLa~~~t~~VRiPV~~~~~~V~D~~G~~v~Sqivp~~~~~~al~----------~~~ 535 (996)
T KOG1959|consen 469 ISECAFTKD---GADNFIVTLYNPLAHTVTQYVRIPVKEENYRVTDEKGRTVPSQIVPVPWQVLALE----------SRN 535 (996)
T ss_pred cccCCCCcC---CcCcEEEEEEcCCcceeeeEEEEeccCCCeEEECCCCCCcccceeccchhhhhhh----------ccc
Confidence 999999973 3678999999999999999999999999999999999999999999875432221 122
Q ss_pred CCCcEEEEEEeecCCCceEEEEEEecCCCCCccccccccccccCCCCceEEecceEEEEEECCCCCeEEEEecCCcceEE
Q 002064 554 VPPKYWLAFPVSVPPLGFSTYTISSVKRGGGHSIRSSIQTFESSDKSTVEVGQGNLKLIFSSDKSKPINYINNKSLVEES 633 (973)
Q Consensus 554 ~~~~~~l~f~~~vPplG~~~y~i~~~~~~~~~~~~s~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~l~si~dk~~g~~~~ 633 (973)
....|+|+|.|.|||+|+++|.|+........+ .+..............|+|+++++.||..+|.+++|....+|.+..
T Consensus 536 ~~~~~eLvf~asvpplg~aty~i~k~~~~~~~~-~~~~~~i~~~~~n~~~V~n~~~kl~fd~~tG~l~~v~~n~t~~t~~ 614 (996)
T KOG1959|consen 536 NDTKHELVFKASVPPLGIATYFIKKVASTERGS-ASHVRNIKKRESNATEVGNSHLKLVFDNDTGLLKTVEMNQTGVTEN 614 (996)
T ss_pred cCCCceEEEEEEecCccceEEEEeecCcccccc-cccccccccccCcceEeccceEEEEEcCCCCceEEEEecccCccee
Confidence 345789999999999999999999655432210 0111111122334489999999999998889999999888999999
Q ss_pred eeeeeEEeeccCCCCCCCCCCCCceeEecCCCeeeecC-CceeEEEEEcccEEEEEEEEeceEEEEEEEeCCCCeEEEEE
Q 002064 634 VEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSE-GQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEF 712 (973)
Q Consensus 634 ~~~~f~~Y~~~~G~~~~~~~~sGAYiF~P~~~~~~~~~-~~~~i~v~~G~l~~~v~~~~~~~i~~~vrL~~~~~~ie~e~ 712 (973)
+.|.|.+|.+..|++ +.+.||||+|+| +..++++. ....++|+.||++.||++.++.|++|.+|||+|.+++|+||
T Consensus 615 V~Q~f~~Y~~~~g~n--~~q~SgAYiFRp-~~~~~~~~~~~vel~vv~G~LV~EVhQ~f~~wiSQviRvy~g~~~~E~Ew 691 (996)
T KOG1959|consen 615 VDQEFGYYKGYRGDN--DKQASGAYIFRP-GQADIPIVSDQVELTVVDGPLVKEVHQQFNPWISQVIRVYEGKNHVEFEW 691 (996)
T ss_pred eeeeeEEEEeecCCc--CCccCcceEecC-CCCCccccccceEEEEecCchHHHHHHHHHHHHhheeEecCCCcceEEEE
Confidence 999999999988853 358999999999 54444443 35788999999999999999999999999999999999999
Q ss_pred EEccccccCCCCcEEEEEEEecCCCCCeEEEecCCCceeeccccCCCCCcccCCCccccceEeeceeEEEEeCCceeEEE
Q 002064 713 IVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLL 792 (973)
Q Consensus 713 ~v~~ip~~~~~~~Ev~~~f~t~i~~~~~fyTDsnG~~~ikR~~~~r~~w~~~~~~pv~~NyYP~~s~~~I~D~~~~ltvl 792 (973)
.|+|||++++.|||++.||.|+|++++.|||||||+||+||.+++|++|..+..+||+||||||++.|||+|++.+|+||
T Consensus 692 ~VGpIp~~d~~gkEvVtr~~t~i~S~g~fYTDSNGRe~~kR~~d~r~~~~~~~~epiAGNYYPvt~~i~lqD~~~rl~vL 771 (996)
T KOG1959|consen 692 LVGPIPIDDGIGKEVVTRFSTEISSNGVFYTDSNGREMIKRVRDKREDFVLDVNEPIAGNYYPVTSRIYLQDSKKRLSVL 771 (996)
T ss_pred EecceecCCCccceEEEEeccccccCceEEecCcHHHHHHHHhcccCCCccccCccccccccccceeeEEecCCceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccceeeccCCEEEEEEeeccccCCCcccccccccccccccccCCeEEEeEEEEEeccCCCcc-cccccchhhhcCCc
Q 002064 793 VDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGA-KWRRTFGQEIYSPP 871 (973)
Q Consensus 793 ~dr~~G~ssl~~G~iElmL~Rrl~~DD~rGvge~l~d~~~~~~~~~gl~~~~~~~l~~~~~~~~~-~~~r~~~~~l~~p~ 871 (973)
|||+|||+|++||+||||||||++.||+|||||+|||+.++ ..||+++|+|++.|+.....+ ..+|..++++..|.
T Consensus 772 ~DRAqGgsSl~dG~lElMLHRRl~~DD~~Gv~EaLnEt~~~---~~gL~~rGk~~~~l~~~~d~a~~~~r~~~~ei~~P~ 848 (996)
T KOG1959|consen 772 NDRAQGGSSLKDGQLELMLHRRLLNDDGRGVGEALNETVYG---HAGLIARGKLYVLLDKAGDGATGWRRLAEQEIHLPL 848 (996)
T ss_pred eecccCCccccCCeEEEEeeehhhcccccccchhccccccc---ccceEEeeeEEEEEecccccchhhhhhhhhhcccHH
Confidence 99999999999999999999999999999999999999886 279999999999999888775 77888899999999
Q ss_pred eeEeeccCCCcccCCccccccCCCCCCCCCcceEEEEeeecCCCcEEEEecchhchh
Q 002064 872 LLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNVAIITLQELDDGKILLRLAHLYQVL 928 (973)
Q Consensus 872 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~lp~nvhlltl~~~~~~~~llRl~h~~e~~ 928 (973)
+.+|++..+..+......+.+.+..+..||.+||||||++|+++.+||||||+||++
T Consensus 849 ~~~f~~~~~~~~~~~~s~~~~~f~~~~~lP~~vhLlTLe~~~~~~vLlRleh~~e~g 905 (996)
T KOG1959|consen 849 WKFFSKPEGGEALNSLSIPGSAFSGSYDLPQSVHLLTLEEWSKDEVLLRLEHLYEVG 905 (996)
T ss_pred HHHhhcCCCccchhhcCCCccccccccCCCcceeeeecccCCCCceEeeehhhhhcc
Confidence 999998776555443332222333345899999999999999999999999999884
|
|
| >PLN02701 alpha-mannosidase | Back alignment and domain information |
|---|
| >KOG1958 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK09819 alpha-mannosidase; Provisional | Back alignment and domain information |
|---|
| >KOG4342 consensus Alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF01074 Glyco_hydro_38: Glycosyl hydrolases family 38 N-terminal domain; InterPro: IPR000602 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF09261 Alpha-mann_mid: Alpha mannosidase, middle domain; InterPro: IPR015341 Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold | Back alignment and domain information |
|---|
| >smart00872 Alpha-mann_mid Alpha mannosidase, middle domain | Back alignment and domain information |
|---|
| >COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF03065 Glyco_hydro_57: Glycosyl hydrolase family 57; InterPro: IPR004300 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >COG1543 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF01522 Polysacc_deac_1: Polysaccharide deacetylase; InterPro: IPR002509 This domain is found in polysaccharide deacetylase | Back alignment and domain information |
|---|
| >COG1449 Alpha-amylase/alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB | Back alignment and domain information |
|---|
| >TIGR03212 uraD_N-term-dom putative urate catabolism protein | Back alignment and domain information |
|---|
| >TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase | Back alignment and domain information |
|---|
| >TIGR03006 pepcterm_polyde polysaccharide deactylase family protein, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family | Back alignment and domain information |
|---|
| >PRK14582 pgaB outer membrane N-deacetylase; Provisional | Back alignment and domain information |
|---|
| >PRK14581 hmsF outer membrane N-deacetylase; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 973 | ||||
| 1o7d_A | 298 | The Structure Of The Bovine Lysosomal A-Mannosidase | 2e-79 | ||
| 1hxk_A | 1015 | Golgi Alpha-Mannosidase Ii In Complex With Deoxyman | 2e-76 | ||
| 1ps3_A | 1045 | Golgi Alpha-mannosidase Ii In Complex With Kifunens | 2e-76 | ||
| 1qwn_A | 1045 | Golgi Alpha-Mannosidase Ii Covalent Intermediate Co | 2e-76 | ||
| 3dx3_A | 1045 | Golgi Alpha-Mannosidase Ii In Complex With Mannosta | 2e-76 | ||
| 1qwu_A | 1045 | Golgi Alpha-Mannosidase Ii D341n Mutant Complex Wit | 8e-76 | ||
| 3cv5_A | 1045 | Golgi Mannosidase Ii D204a Catalytic Nucleophile Mu | 2e-75 | ||
| 1hty_A | 1015 | Golgi Alpha-Mannosidase Ii Length = 1015 | 4e-72 | ||
| 1o7d_D | 282 | The Structure Of The Bovine Lysosomal A-Mannosidase | 8e-52 | ||
| 1o7d_C | 159 | The Structure Of The Bovine Lysosomal A-Mannosidase | 3e-16 | ||
| 1o7d_B | 84 | The Structure Of The Bovine Lysosomal A-Mannosidase | 8e-15 |
| >pdb|1O7D|A Chain A, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 298 | Back alignment and structure |
|
| >pdb|1HXK|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin Length = 1015 | Back alignment and structure |
| >pdb|1PS3|A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine Length = 1045 | Back alignment and structure |
| >pdb|1QWN|A Chain A, Golgi Alpha-Mannosidase Ii Covalent Intermediate Complex With 5- Fluoro-Gulosyl-Fluoride Length = 1045 | Back alignment and structure |
| >pdb|3DX3|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Mannostatin Analog (1r,2r, 3s,4r,5r)-5-Aminocyclopentane-1,2,3,4-Tetraol Length = 1045 | Back alignment and structure |
| >pdb|1QWU|A Chain A, Golgi Alpha-Mannosidase Ii D341n Mutant Complex With 5-F-Guloside Length = 1045 | Back alignment and structure |
| >pdb|3CV5|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant Complex With 3alpha,6alpha-Mannopentaose Length = 1045 | Back alignment and structure |
| >pdb|1HTY|A Chain A, Golgi Alpha-Mannosidase Ii Length = 1015 | Back alignment and structure |
| >pdb|1O7D|D Chain D, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 282 | Back alignment and structure |
| >pdb|1O7D|C Chain C, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 159 | Back alignment and structure |
| >pdb|1O7D|B Chain B, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 84 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... Length = 1045 | Back alignment and structure |
|---|
Score = 709 bits (1831), Expect = 0.0
Identities = 233/965 (24%), Positives = 396/965 (41%), Gaps = 103/965 (10%)
Query: 23 QAKYRVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSVI 82
Q Y+ + KL V +V H+H+D GW++T ++YY +++L + +
Sbjct: 64 QGWNIKYDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQH--------DTKHILSNAL 115
Query: 83 PELLADKNRKFIYVEQAFFQRWWDEQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVTHY 142
L + KFI+ E ++F R++ + E + ++K +V +GQLEF+ GG M DEA +H+
Sbjct: 116 RHLHDNPEMKFIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHW 175
Query: 143 IDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDR 202
+++ Q T G ++K VTP W I PFGHS Y+L + GF + R Y +
Sbjct: 176 RNVLLQLTEGQTWLKQFMNVTPTASWAIAPFGHSPTMPYIL-QKSGFKNMLIQRTHYSVK 234
Query: 203 AKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPENYEPPPG----------GFYFEVNDK-- 250
+ ++ LE +W+ +F P P F F+
Sbjct: 235 KELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSFG 294
Query: 251 --YPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQ- 307
P + D NV R + V +A + RTN ++ +G DF+++ W Q
Sbjct: 295 LSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQR 354
Query: 308 --LDKFIHYVNMDGR--VNALYSTPSIYTDA----KYASNESWPLKTDDFFPYADRAHAY 359
++ ++N V A + T Y DA + A +P + DFF YADR+ Y
Sbjct: 355 VNYERLFEHINSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNY 414
Query: 360 WTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADA---LAIAQHHDAV 416
W+GY++SRP KR +V+ Y AA L + + L A L++ QHHD +
Sbjct: 415 WSGYYTSRPYHKRMDRVLMHYVRAAEMLSAWHSWDGMARIEERLEQARRELSLFQHHDGI 474
Query: 417 TGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPLLNISY 476
TGT K HV DY +R+ + V+ ++ L+ PS S L+ S
Sbjct: 475 TGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSIYSPDFSF----SYFTLDDSR 530
Query: 477 CPASEIDFSN---------GKNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIES 527
P S ++ S + +V++N+L RE ++ V++ V+V + +E+
Sbjct: 531 WPGSGVEDSRTTIILGEDILPSKHVVMHNTLPHWREQLVDFYVSSPFVSVTDLANNPVEA 590
Query: 528 QLVPPADAFMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVKRGGGHSI 587
Q+ P D + KY + F VPP+G +TY ++ H+
Sbjct: 591 QVSPVWSWHHDTLTKTIHPQGS-----TTKYRIIFKARVPPMGLATYVLTISDSKPEHTS 645
Query: 588 RSSIQTFES----------------SDKSTVEVGQGNLKLIFSSDKSKPINYINNKSLVE 631
+S D + + GN + S++ + +
Sbjct: 646 YASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSEQGLLKSIQLTQDSPH 705
Query: 632 ESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKI 691
V + Y + +GAY+F PNG GQ + V +G + V +
Sbjct: 706 VPVHFKFLKYGVRSHG-----DRSGAYLFLPNGPASPVELGQPVVLVTKGKLESSVSVGL 760
Query: 692 NEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFI 751
++Q + G + +G + E+V + + +++ FYTD NG FI
Sbjct: 761 PSVVHQT-IMRGGAPEIRNLVDIGSLD-----NTEIVMRLETHIDSGDIFYTDLNGLQFI 814
Query: 752 KRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELML 811
KR R + P+ NYYPI G++++D +LL + LGGSS+ GE+E+M
Sbjct: 815 KRRRLDK--------LPLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGELEIMQ 866
Query: 812 HRRLLLDDSRGVAEALNETDCVLDECKGL---TIQGKYYFRIDTIGDGAKWRRTFGQEIY 868
RRL DD RG+ + + + VL + + ++ G Q +
Sbjct: 867 DRRLASDDERGLGQGVLDNKPVLHIYRLVLEKVNNCVRPSKLHPAGYLTSAAHKASQSLL 926
Query: 869 SPPLLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNVAIITLQELDDGK-------ILLRL 921
P E + W + F G S +++ + ++ L +L
Sbjct: 927 DPLDKFIFAE--NEWIGAQ-GQFGGDHP--SAREDLDVSVMRRLTKSSAKTQRVGYVLHR 981
Query: 922 AHLYQ 926
+L Q
Sbjct: 982 TNLMQ 986
|
| >1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1 Length = 298 | Back alignment and structure |
|---|
| >3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} Length = 899 | Back alignment and structure |
|---|
| >2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A* Length = 923 | Back alignment and structure |
|---|
| >1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Length = 282 | Back alignment and structure |
|---|
| >1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6 Length = 159 | Back alignment and structure |
|---|
| >1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1 Length = 84 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Length = 126 | Back alignment and structure |
|---|
| >1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A* Length = 659 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 973 | |||
| 3bvx_A | 1045 | Alpha-mannosidase 2; family 38 glycoysl hydrolase, | 100.0 | |
| 2wyh_A | 923 | Alpha-mannosidase; hydrolase, glycosidase, glycosi | 100.0 | |
| 3lvt_A | 899 | Glycosyl hydrolase, family 38; PSI, MCSG, structur | 100.0 | |
| 1o7d_A | 298 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 100.0 | |
| 1o7d_D | 282 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 100.0 | |
| 1o7d_C | 159 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 99.97 | |
| 1o7d_B | 84 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 99.89 | |
| 1k1x_A | 659 | 4-alpha-glucanotransferase; 2.40A {Thermococcus li | 99.79 | |
| 3p0b_A | 540 | TT1467 protein; glycoside hydrolase GH57, glycogen | 98.82 | |
| 2b5d_X | 528 | Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2. | 98.76 | |
| 3n98_A | 562 | Alpha-amylase, GH57 family; GH57 family member, br | 98.74 | |
| 1o7d_E | 126 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 98.3 | |
| 3rxz_A | 300 | Polysaccharide deacetylase; structural genomics, P | 95.86 | |
| 3cl6_A | 308 | PUUE allantoinase; URIC acid, nitrogen fixation, h | 95.28 | |
| 3s6o_A | 321 | Polysaccharide deacetylase family protein; ssgcid, | 95.03 | |
| 3qbu_A | 326 | Putative uncharacterized protein; metallo enzyme, | 94.35 | |
| 2y8u_A | 230 | Chitin deacetylase; hydrolase; 1.99A {Emericella n | 89.96 | |
| 2cc0_A | 195 | Acetyl-xylan esterase; hydrolase, carbohydrate est | 89.91 |
| >3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-158 Score=1495.41 Aligned_cols=879 Identities=26% Similarity=0.414 Sum_probs=732.5
Q ss_pred eEecCCCCCCCCceEEEEEecccCCCcchhhhhhheecCCCcchhHHHHHHHHHHHHHHHhCCCCeEEEechhhHHHHHH
Q 002064 27 RVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSVIPELLADKNRKFIYVEQAFFQRWWD 106 (973)
Q Consensus 27 ~~y~~~~~~~~~~~~VhlVpHSH~D~gWl~T~dey~~g~~~~i~~~~v~~il~~vi~~L~~~p~~kF~~~e~~~f~~Ww~ 106 (973)
+.|+.+.+....+++||+|||||||+|||||+++||. ..+++++++|++.|++||++||+|+|+++|++||+
T Consensus 68 ~~~~~~~~~~~~~~~V~lV~HsH~D~gWl~t~~e~~~--------~~~~~~~~~vl~~L~~~p~~~F~~~e~~~l~~w~~ 139 (1045)
T 3bvx_A 68 IKYDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQ--------HDTKHILSNALRHLHDNPEMKFIWAEISYFARFYH 139 (1045)
T ss_dssp CCCCGGGSBTTBCEEEEEEEEEECCSSSSSCHHHHHH--------HTHHHHHHHHHHHHHHCTTCCEEECCHHHHHHHHH
T ss_pred hhhhccccCCCCceEEEEEecCCCCccccchHHHhhh--------HHHHHHHHHHHHHHHHCCCcEEEEecHHHHHHHHH
Confidence 4466555555568999999999999999999999997 67999999999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHhCCcEEEEcceeeeecccCCChHHHHHHHHHHHHHHHHHhCCCCcceeecCCCCCChhhHHHHhhh
Q 002064 107 EQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSE 186 (973)
Q Consensus 107 ~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~esiIrql~~G~~~l~~~fG~~p~vgW~iDpFGhS~~~p~ll~~~ 186 (973)
+++|+++++||+||++|||||+||||||+|||++||||+||||++||+|++++||+.|++||+|||||||++||||| ++
T Consensus 140 e~~Pe~~~~vk~lV~~Grle~~gG~Wv~~De~~~~~EslirQl~~G~~~~~~~FG~~~~~~W~pD~FG~s~~lPqil-~~ 218 (1045)
T 3bvx_A 140 DLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIAPFGHSPTMPYIL-QK 218 (1045)
T ss_dssp HSCHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCSSSBCTHHHHHH-HT
T ss_pred HCCHHHHHHHHHHHhCCCEEEECCccccccccCCCHHHHHHHHHHHHHHHHHHhCCCCceEEcCCCCCccHHHHHHH-HH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred cCCcEEEEeccchhhhhhhccCCcceEEEecCCCCCCCceeEEeecCC-CCCC-----CCC----CcccccCCC---CCc
Q 002064 187 VGFDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPE-NYEP-----PPG----GFYFEVNDK---YPI 253 (973)
Q Consensus 187 ~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~I~th~~~~-~Y~~-----p~~----~f~f~~~~~---~~p 253 (973)
|||++++++|++|++++.|+..+.+||+|+|+|+..+|++||||++|. +|+. |+. +|+|+.+.+ .||
T Consensus 219 ~Gi~~~~~~R~~~~~~~~~~~~k~~eF~W~~~w~~~dGs~Ilt~~~p~~~Y~~~~~~gp~~~~c~~fdf~~l~~~~~~~~ 298 (1045)
T 3bvx_A 219 SGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSFGLSCP 298 (1045)
T ss_dssp TTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEECCSSCSSGGGTSSSCHHHHGGGCGGGSSTTSCCCT
T ss_pred cCCCeEEEecccccccccccccCCceEEEeCCCCCCCCCeEEEEeccccccCcccccCCCccccccccccccccccccCc
Confidence 999999999999999999998999999999777666699999999994 7753 222 466666533 345
Q ss_pred cccC-cccccccHHHHHHHHHHHHHHhccccCCCeEEEeccCCccccchHHH---HHHHHHHHHHHhcCC--CeEEEEcC
Q 002064 254 IQDN-IKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTW---FRQLDKFIHYVNMDG--RVNALYST 327 (973)
Q Consensus 254 ~~d~-~~i~~~nv~~r~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~---f~n~~kli~~~N~~~--~~~i~~sT 327 (973)
+.++ ..+.++|+++|++.+++++++++.+|+++++|+|+|+||+|.++.+| |+||++||+++|+.+ .++++|||
T Consensus 299 ~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~t~~~l~~~G~d~~~~~~~~~~~~~~n~~~li~~in~~~~~~~~v~~sT 378 (1045)
T 3bvx_A 299 WKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQFGT 378 (1045)
T ss_dssp TSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHHHHHHHHHHHHHHHCGGGCEEEEECC
T ss_pred ccCCcccccHHHHHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchhhhHHHHHHHHHHHHHHhhCCCCCceEEECC
Confidence 4444 35678899999999999999999999999999999999999998766 999999999999764 58999999
Q ss_pred hhhHHHHHHhcC----CCCCCcCCCCccccccCCCcccceeechhhHHHHHHHHHHHHHHHHHHHHhhcc---CCCCCch
Q 002064 328 PSIYTDAKYASN----ESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGR---SETGHNT 400 (973)
Q Consensus 328 ~~~Yf~al~~~~----~~~p~~~gDffpy~~~~~~yWtGyyTSRp~~K~~~R~~e~~L~~ae~l~~l~~~---~~~~~~~ 400 (973)
+++||++++++. ..||+++|||+||+++.++||+|||||||.+|+++|++|++|++||+|++++.. .++...+
T Consensus 379 ~~~yf~~l~~~~~~~~~~lp~~~Ge~~~~~~~~~~yw~G~yTSr~~~K~~nR~~e~~L~~aE~l~ala~~~~~~~~~~~L 458 (1045)
T 3bvx_A 379 LQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRAAEMLSAWHSWDGMARIEERL 458 (1045)
T ss_dssp HHHHHHHHHHHHHTTSCCCCEEESCBCSCEEETTEECCGGGTSSHHHHHHHHHHHHHHHHHHHHHHTSCCCGGGCHHHHH
T ss_pred HHHHHHHHHhhcccccccCcccCCcccccccCCcccccceecccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHH
Confidence 999999998753 369999999999999999999999999999999999999999999999999753 3555678
Q ss_pred HHHHHHHHHhcccccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC---cccccccccccccC
Q 002064 401 DSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRST---TRFQQCPLLNISYC 477 (973)
Q Consensus 401 ~~lw~~l~l~QhHDaItGTs~~~V~~Dy~~rL~~a~~~~~~~~~~~l~~L~~~~~~~~~~~~~---~~~~~~~~ln~s~c 477 (973)
+++|++|+++||||+||||++++|++||.+||.+|.+.++.++..+++.|+..... .+..+. .++..|.+++.+.|
T Consensus 459 ~~~wk~lll~QhHD~i~Gts~~~V~~d~~~rl~~a~~~~~~l~~~al~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 537 (1045)
T 3bvx_A 459 EQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSI-YSPDFSFSYFTLDDSRWPGSGVE 537 (1045)
T ss_dssp HHHHHHHHHHTBTTTTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCTTT-CCCCTTSCSEEEECSSSSCTTTC
T ss_pred HHHHHHHhccccccCCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-ccccccccccchhhhcccccccc
Confidence 89999999999999999999999999999999999999999999999999853211 111111 12234555666667
Q ss_pred CCcccccCCCC---eEEEEEEcCCCceEEEEEEEEEecCcEEEEecCCCeEEEEEeCCCccccchhhhhhhhccCCCCCC
Q 002064 478 PASEIDFSNGK---NLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMV 554 (973)
Q Consensus 478 ~~~~~~~~~~~---~~~vvvfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (973)
+........++ ...|+|||||+|+|+++|+|+|..+.+.|.|.+|++|++|+++.+.....+....+ .....
T Consensus 538 ~~~~~i~~~~~~~~~~~vvvfN~L~~~r~~~V~v~v~~~~~~V~D~~G~~v~~Qi~~~~~~~~~~~~~~~-----~~~~~ 612 (1045)
T 3bvx_A 538 DSRTTIILGEDILPSKHVVMHNTLPHWREQLVDFYVSSPFVSVTDLANNPVEAQVSPVWSWHHDTLTKTI-----HPQGS 612 (1045)
T ss_dssp CCCCEECCBTTTBSEEEEEEEECSSSCEEEEEEEEESCSCEEEEETTCCEECEEEEEEEEEEEETTTTEE-----EEEEE
T ss_pred cccccccccccccCCceEEEEcCCCcceeeEEEEEeccCceEEEcCCCCEEeEEEeeccccccccccccc-----cccCC
Confidence 65321000122 56899999999999999999999999999999999999999987543211100000 00001
Q ss_pred CCcEEEEEEeecCCCceEEEEEEecCCCCCccccccc----------ccc-ccCCCCceEEecceE------EEEEECCC
Q 002064 555 PPKYWLAFPVSVPPLGFSTYTISSVKRGGGHSIRSSI----------QTF-ESSDKSTVEVGQGNL------KLIFSSDK 617 (973)
Q Consensus 555 ~~~~~l~f~~~vPplG~~~y~i~~~~~~~~~~~~s~~----------~~~-~~~~~~~~~ieN~~~------~v~~~~~~ 617 (973)
...|+|+|.++||||||++|.|............+++ ... .....+...|||+++ +|+|++ +
T Consensus 613 ~~~~~L~f~a~vP~lG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~leN~~~~~~~~~~v~fd~-~ 691 (1045)
T 3bvx_A 613 TTKYRIIFKARVPPMGLATYVLTISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSE-Q 691 (1045)
T ss_dssp EEEEEEEEEEEECTTEEEEEEEEECSSCCTTEEECEEEEECSSCCCCCCTTCSSCCEEECCCCEEEECTTSCEEEECT-T
T ss_pred CCcEEEEEEeccCCceeEEEEEEecCCccccccccceeecccccccccccccccCCCceeecccccccccccEEEECC-C
Confidence 2357899999999999999999876543210000000 000 001334578999999 999995 9
Q ss_pred CCeEEEEecCCcceEEeeeeeEEeeccCCCCCCCCCCCCceeEecCCCeeeecCCceeEEEEEcccEEEEEEEEeceEEE
Q 002064 618 SKPINYINNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQ 697 (973)
Q Consensus 618 G~l~si~dk~~g~~~~~~~~f~~Y~~~~G~~~~~~~~sGAYiF~P~~~~~~~~~~~~~i~v~~G~l~~~v~~~~~~~i~~ 697 (973)
|.|+||+||++|+++.+.++|.+|.+..| ++.||||+|+|++.+.........+++++||++++|++.+ .+++|
T Consensus 692 G~L~si~dk~~g~e~~~~~~f~~Y~~~~~-----~~~sgaY~F~P~~~~~~~~~~~~~~~v~~Gpl~~ev~~~~-~~i~q 765 (1045)
T 3bvx_A 692 GLLKSIQLTQDSPHVPVHFKFLKYGVRSH-----GDRSGAYLFLPNGPASPVELGQPVVLVTKGKLESSVSVGL-PSVVH 765 (1045)
T ss_dssp SCEEEEECSTTSCCEEEEEEEEEECBCSS-----SCCCCSSCCCBSSSCEECCCCSCCEEEEECSSCEEEEEEE-TTEEE
T ss_pred CcEEEEEEcCCCeEEEEeeEEEEEecccC-----CCCCcceEecCCCCCcccccCCceEEEEeCCeEEEEEEEE-eeEEE
Confidence 99999999999999999999999976554 4689999999998752222335677889999999999999 58999
Q ss_pred EEEEeCCCCeEEEEEEEccccccCCCCcEEEEEEEecCCCCCeEEEecCCCceeeccccCCCCCcccCCCccccceEeec
Q 002064 698 VTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPIN 777 (973)
Q Consensus 698 ~vrL~~~~~~ie~e~~v~~ip~~~~~~~Ev~~~f~t~i~~~~~fyTDsnG~~~ikR~~~~r~~w~~~~~~pv~~NyYP~~ 777 (973)
++|| ++++||++++|+. .+..|||++++|+|+|++++.||||+||||+++|+++. .+|+++|||||+
T Consensus 766 ~irL--~~~~ieie~~Vd~---~~~~~~el~~rf~t~i~s~~~fyTD~nG~~~ikR~~~~--------~~p~~~NyYPv~ 832 (1045)
T 3bvx_A 766 QTIM--RGGAPEIRNLVDI---GSLDNTEIVMRLETHIDSGDIFYTDLNGLQFIKRRRLD--------KLPLQANYYPIP 832 (1045)
T ss_dssp EEEE--SSSSCEEEEEECC---TTCTTEEEEEEEEECCCCTTEEEEEETTTEEEEEECCT--------TSCGGGGCEEES
T ss_pred EEEE--CCeeEEEEEEEec---CCCCCeEEEEEeecccCCCCeEEEecCCceeEEcCCCC--------CCCcccceEEee
Confidence 9999 8899999999963 33458999999999999999999999999999999874 478999999999
Q ss_pred eeEEEEeCCceeEEEeccccceeeccCCEEEEEEeeccccCCCcccccccccccccccccCCeEEEeEEEEEeccCCCcc
Q 002064 778 LGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGA 857 (973)
Q Consensus 778 s~~~I~D~~~~ltvl~dr~~G~ssl~~G~iElmL~Rrl~~DD~rGvge~l~d~~~~~~~~~gl~~~~~~~l~~~~~~~~~ 857 (973)
++|+|+|++.||||++||++|++|+++|+||||||||+++||+|||||+|+|+ ++++++|||+|++...++
T Consensus 833 s~~~i~D~~~~ltvl~drs~G~sSl~~G~lElmlhRrl~~DD~rGvge~l~d~---------~~~~~~~~l~l~~~~~~~ 903 (1045)
T 3bvx_A 833 SGMFIEDANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGVLDN---------KPVLHIYRLVLEKVNNCV 903 (1045)
T ss_dssp SEEEEECSSEEEEEEESSCEEEECCSTTEEEEEEEEEBCSCCSSSCCSCBCCC---------CCEEEEEEEEEEECTTSC
T ss_pred eeEEEEcCCeeEEEEecCCccccccCCCeEEEEEeeeeccCCcccccccccCC---------ceeeeEEEEEEecccccc
Confidence 99999999999999999999999999999999999999999999999999986 578999999999877544
Q ss_pred c------------ccccchhhhcCCceeEeeccCCCcccCCccccccCCCCCCCCCcceEEEEeeecCCCc-----EEEE
Q 002064 858 K------------WRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNVAIITLQELDDGK-----ILLR 920 (973)
Q Consensus 858 ~------------~~r~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lp~nvhlltl~~~~~~~-----~llR 920 (973)
. ..|..++++++||+++++.... + .....+|+++.. +|||||||+|||++++++ +|||
T Consensus 904 ~~~~~~~~~~~s~~~~~~~~~l~~p~~~~~~~~~~--~-~~~~~~~~~l~~--~lP~~vhlltL~~~~~~~~~~~~~ll~ 978 (1045)
T 3bvx_A 904 RPSKLHPAGYLTSAAHKASQSLLDPLDKFIFAENE--W-IGAQGQFGGDHP--SAREDLDVSVMRRLTKSSAKTQRVGYV 978 (1045)
T ss_dssp CCCTTCSEECCCHHHHHHHHHHHSCCEEEEECSSC--C-TTBCSEECTTSC--CCCTTEEEEEEEECSCTTCSEEEEEEE
T ss_pred cccccccccccCHHHHHHHHHHhCCcceeeccCcc--c-ccccccCCcccc--cCCCCEEEEEeEecCCCCccCceEEEE
Confidence 2 2456788999999999886322 2 235667888764 899999999999999988 9999
Q ss_pred ecch--hchhh-------HHHHHHHHhccccccccccchhhhhee
Q 002064 921 LAHL--YQVLF-------FFTAILKHLKGSLNYVSSTLFYLKILL 956 (973)
Q Consensus 921 l~h~--~e~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 956 (973)
| |. |++.. .+ +|-.-|++-.+..||+|+++..+-
T Consensus 979 L-~~~~~~~~~~~~s~~~~~-~l~~lf~~i~~~~etsL~~~~~~~ 1021 (1045)
T 3bvx_A 979 L-HRTNLMQCGTPEEHTQKL-DVCHLLPNVARCERTTLTFLQNLE 1021 (1045)
T ss_dssp E-EECCCCCCSCCCCCCCCC-CGGGSSSSEEEEEEECTTSCSEEE
T ss_pred E-eeeccccCcCcccCcccc-cHHHHhcCcceEEEecccCCcccc
Confidence 9 66 66643 23 233334443478899999977653
|
| >2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A* | Back alignment and structure |
|---|
| >3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} | Back alignment and structure |
|---|
| >1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1 | Back alignment and structure |
|---|
| >1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 | Back alignment and structure |
|---|
| >1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6 | Back alignment and structure |
|---|
| >1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1 | Back alignment and structure |
|---|
| >1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A* | Back alignment and structure |
|---|
| >3p0b_A TT1467 protein; glycoside hydrolase GH57, glycogen branching, transferase; 1.35A {Thermus thermophilus} PDB: 1ufa_A | Back alignment and structure |
|---|
| >2b5d_X Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2.20A {Thermotoga maritima} SCOP: a.8.3.3 c.6.2.4 | Back alignment and structure |
|---|
| >3n98_A Alpha-amylase, GH57 family; GH57 family member, branching enzyme, transferase; HET: BGC PG4; 1.87A {Thermococcus kodakarensis} PDB: 3n92_A* 3n8t_A* | Back alignment and structure |
|---|
| >1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 | Back alignment and structure |
|---|
| >3rxz_A Polysaccharide deacetylase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, carbohydrate esterase family 4; 2.01A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
| >3cl6_A PUUE allantoinase; URIC acid, nitrogen fixation, hydrolase; 1.58A {Pseudomonas fluorescens} PDB: 3cl7_A 3cl8_A 1z7a_A | Back alignment and structure |
|---|
| >3s6o_A Polysaccharide deacetylase family protein; ssgcid, NIH, structural genomics, seattle structural genomic for infectious disease; 1.85A {Burkholderia pseudomallei} SCOP: c.6.2.6 | Back alignment and structure |
|---|
| >3qbu_A Putative uncharacterized protein; metallo enzyme, peptidoglycan, TIM barrel, deacetylase, HYDR; 2.57A {Helicobacter pylori} | Back alignment and structure |
|---|
| >2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans} | Back alignment and structure |
|---|
| >2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 973 | ||||
| g1o7d.2 | 490 | b.30.5.6 (C:488-585,D:603-875,E:885-1007) Lysosoma | 1e-116 | |
| g1o7d.3 | 330 | c.6.2.1 (A:51-342,B:347-384) Lysosomal alpha-manno | 1e-112 | |
| d3bvua2 | 522 | b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II { | 1e-107 | |
| d3bvua3 | 381 | c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fru | 1e-106 | |
| d1k1xa3 | 310 | c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-te | 1e-36 | |
| g1o7d.1 | 95 | a.8.3.1 (B:385-422,C:431-487) Lysosomal alpha-mann | 1e-25 | |
| d3bvua1 | 111 | a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fr | 1e-24 |
| >d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 522 | Back information, alignment and structure |
|---|
| >d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 381 | Back information, alignment and structure |
|---|
| >d1k1xa3 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Length = 310 | Back information, alignment and structure |
|---|
| >d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 111 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 973 | |||
| d3bvua3 | 381 | Golgi alpha-mannosidase II {Fruit fly (Drosophila | 100.0 | |
| g1o7d.3 | 330 | Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax | 100.0 | |
| d3bvua2 | 522 | Golgi alpha-mannosidase II {Fruit fly (Drosophila | 100.0 | |
| g1o7d.2 | 490 | Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax | 100.0 | |
| d1k1xa3 | 310 | 4-alpha-glucanotransferase, N-terminal domain {Arc | 99.97 | |
| d3bvua1 | 111 | Golgi alpha-mannosidase II {Fruit fly (Drosophila | 99.93 | |
| g1o7d.1 | 95 | Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax | 99.93 | |
| d2b5dx2 | 404 | Alpha-amylase AmyC {Thermotoga maritima [TaxId: 23 | 98.22 | |
| d1ufaa2 | 412 | Hypothetical protein TT1467, N-terminal domain {Th | 97.68 | |
| d1z7aa1 | 301 | Hypothetical protein PA1517 {Pseudomonas aeruginos | 94.8 | |
| d2c1ia1 | 196 | Peptidoglycan GlcNAc deacetylase C-terminal domain | 92.74 | |
| d2cc0a1 | 192 | Acetyl-xylan esterase {Streptomyces lividans [TaxI | 86.44 | |
| d2j13a1 | 235 | Putative polysaccharide deacetylase BA0424 {Bacill | 84.68 | |
| d1ny1a_ | 235 | Probable polysaccharide deacetylase PdaA {Bacillus | 80.53 |
| >d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycoside hydrolase/deacetylase family: alpha-mannosidase domain: Golgi alpha-mannosidase II species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=2.3e-82 Score=708.24 Aligned_cols=325 Identities=29% Similarity=0.546 Sum_probs=302.6
Q ss_pred ccceeeEecCCCCCCCCceEEEEEecccCCCcchhhhhhheecCCCcchhHHHHHHHHHHHHHHHhCCCCeEEEechhhH
Q 002064 22 VQAKYRVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSVIPELLADKNRKFIYVEQAFF 101 (973)
Q Consensus 22 ~~~~~~~y~~~~~~~~~~~~VhlVpHSH~D~gWl~T~dey~~g~~~~i~~~~v~~il~~vi~~L~~~p~~kF~~~e~~~f 101 (973)
++|=.|.|+.+.+...+|++||||||||+|+|||||+++|+. ..+++||+++++.|+++|++||+|+|+++|
T Consensus 33 ~q~~~~~~~~~~~~~~~kl~VhlV~HsH~D~gWl~t~~e~~~--------~~~~~il~~~l~~l~~~p~~~F~~~~~~~~ 104 (381)
T d3bvua3 33 KQGWNIKYDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQ--------HDTKHILSNALRHLHDNPEMKFIWAEISYF 104 (381)
T ss_dssp TTSCCCCCCGGGCBTTBCEEEEEEEEEECCSSSSSCHHHHHH--------HTHHHHHHHHHHHHHHCTTCCEEECCHHHH
T ss_pred cCCcceeechhhcCcCCCcEEEEeCCCCCChhhcCcHHHHHH--------HHHHHHHHHHHHHHHHCCCCEEEEechHHH
Confidence 466678899999988999999999999999999999999997 678999999999999999999999999999
Q ss_pred HHHHHhcCHHHHHHHHHHHhCCcEEEEcceeeeecccCCChHHHHHHHHHHHHHHHHHhCCCCcceeecCCCCCChhhHH
Q 002064 102 QRWWDEQSEAMQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAY 181 (973)
Q Consensus 102 ~~Ww~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~esiIrql~~G~~~l~~~fG~~p~vgW~iDpFGhS~~~p~ 181 (973)
.+||++++|+.+++||+||++||||||||||||+||+++|+|++||||++||+|++++||+.|++||+|||||||++||+
T Consensus 105 ~~w~~~~~pe~~~~vk~lV~~GrlEivgg~wv~~De~~~~~es~Irql~~G~~~l~~~fG~~p~~~w~~D~FGhs~~lp~ 184 (381)
T d3bvua3 105 ARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIAPFGHSPTMPY 184 (381)
T ss_dssp HHHHTTSCHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECSSSSBCTHHHH
T ss_pred HHHHHHcCHHHHHHHHHHHHCCCEEEeCCeeecccccCCCHHHHHHHHHHHHHHHHHHcCCCCceEEeeCCCCccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCcEEEEeccchhhhhhhccCCcceEEEecCCCCCCCceeEEeecCC-CCCCC---------CCCcccccCC--
Q 002064 182 LLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPE-NYEPP---------PGGFYFEVND-- 249 (973)
Q Consensus 182 ll~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~I~th~~~~-~Y~~p---------~~~f~f~~~~-- 249 (973)
|| ++|||++++++|++|++++.++..+.+||+|++.++..+|++||||++|. +|++| +++|+|.++.
T Consensus 185 il-~~~Gi~~~~~~R~~~~~~~~~~~~k~lef~w~~~W~~~~~s~ilth~~~~~~Y~~p~~~~~d~~~~~~f~f~~~~~~ 263 (381)
T d3bvua3 185 IL-QKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSF 263 (381)
T ss_dssp HH-HTTTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEECCSSCSSGGGTSSSCHHHHGGGCGGGSSTT
T ss_pred HH-HhcCCCeEEEEecchhhhcccccccccceeecccccCCCCCceeEecccccccCCcccCCCCccccccccccccccc
Confidence 99 99999999999999999999999999999999998888899999999998 67665 1357777652
Q ss_pred --CCCccccCcccccccHHHHHHHHHHHHHHhccccCCCeEEEeccCCccccchHHH---HHHHHHHHHHHhcCC--CeE
Q 002064 250 --KYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTW---FRQLDKFIHYVNMDG--RVN 322 (973)
Q Consensus 250 --~~~p~~d~~~i~~~nv~~r~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~---f~n~~kli~~~N~~~--~~~ 322 (973)
.+++..++..++++||++|++.|++++++++.+|+|++||+|+|+||+|.+|.+| |+||+|||+++|+.+ +++
T Consensus 264 ~~~~p~~~~~~~i~~~nv~~r~~~~~~~~~~~a~~~~tn~vL~p~G~Df~y~~a~~w~~~~~n~~kli~~iN~~~~~~v~ 343 (381)
T d3bvua3 264 GLSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQ 343 (381)
T ss_dssp SCCCTTSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHHHHHHHHHHHHHHHCGGGCEE
T ss_pred CCCCCcccCCcccchhHHHHHHHHHHHHHHHHhhccCCCeEEEccccCCCCCccchHHHHHHhHHHHHHHHHhCCCCCeE
Confidence 3455556667999999999999999999999999999999999999999999877 999999999999754 689
Q ss_pred EEEcChhhHHHHHHhc----CCCCCCcCCCCcccccc
Q 002064 323 ALYSTPSIYTDAKYAS----NESWPLKTDDFFPYADR 355 (973)
Q Consensus 323 i~~sT~~~Yf~al~~~----~~~~p~~~gDffpy~~~ 355 (973)
++||||++||++|+++ +.+||+++||||||||+
T Consensus 344 i~~ST~~~Yf~al~~~~~~~~~~~P~~~gDFfpYad~ 380 (381)
T d3bvua3 344 AQFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADR 380 (381)
T ss_dssp EEECCHHHHHHHHHHHHHTTSCCCCEEESCBCSCBSS
T ss_pred EEECCHHHHHHHHHHHHhhcCCCCCCcCCCCcCCCCC
Confidence 9999999999999865 57899999999999985
|
| >d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1k1xa3 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
| >d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d2b5dx2 c.6.2.4 (X:1-404) Alpha-amylase AmyC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1ufaa2 c.6.2.4 (A:1-412) Hypothetical protein TT1467, N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1z7aa1 c.6.2.6 (A:4-304) Hypothetical protein PA1517 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d2c1ia1 c.6.2.3 (A:268-463) Peptidoglycan GlcNAc deacetylase C-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
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| >d2cc0a1 c.6.2.3 (A:1-192) Acetyl-xylan esterase {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
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| >d2j13a1 c.6.2.3 (A:1-235) Putative polysaccharide deacetylase BA0424 {Bacillus anthracis [TaxId: 1392]} | Back information, alignment and structure |
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| >d1ny1a_ c.6.2.3 (A:) Probable polysaccharide deacetylase PdaA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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