Citrus Sinensis ID: 002108

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-----
MAGQTATNSDLFEAYFRRADLDGDGQISGAEAVAFFQGSNLPKQVLAQVWSHADQRKAGFLNRAEFFNALKLVTVAQSKRELTPDIVKAALYGPASARIPAPQINLAAMPSSHSRVGAPASQVSGAPSPQNVSVRGPQGLGNASTNQQSPPSQSNHFVRTPQAVLPGTTLHPQQVLSGQSMPSGGTMTAPRPPTSNVSTDWLGGSTVSPLAGSTTQLPNRGSSPSLPQEGFGLPASSLAPSVQPRPPITSGGRAGSPLAGTTSQVSDRGISASSTLDRFGLPASSVAPSVQPRPPGTSAQTPATAPKPQAPDSKSLVVSGNGFSSDSLFGDVFSASPVQPKQDVAISGSVPTSTASVPASPAPKPSLKAGPVEPVQHAFSQPPVGGQYQQGQSAGKQNQQFAVKSTPAAASTGFPIGALNSTSSQSHVPWPKMTHSEVQKYTKVFVQVDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSLKEFCTALYLMERYREGRPLPTMLPSTIMPDEALFSTTSQPQAPHVSGTWGPVAGVQQPHASRPPTGKPPRPFPVPQADRSVQTTPQKSKVPELEKHLMDQLSKEEQESLNAKLKEATEADKKVEELEKEILTSREKIQFCSTKMQELILYKSRCDNRLNEITERVSGDKREVELLAKKYEEKYKQSGDVASKLTLEEATFRDIQEKKMELYQAILKMEGESGDGTLQQHADHIQNELEELVKILNDRCKQYGLRAKPTLLVELPFGWQPGIQEGTADWDEDWDKLEDEGFTFVKELTLEVQNVVAPPKPKSSSVKNETSSNKHDATASSSNIDSKSEKDASEGKDATEEKGASKEKDASKGEEISENEPAHEQNEDGLARGRPNSSAGSGATENQSKEVQDFQIMKDIGADGSPQAKETQSDEVGPESVFSGNKGFDEPSWGTFDTHYDAESVWGFDTDNSKVCEELLFYIAN
ccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
********SDLFEAYFRRADLDGDGQISGAEAVAFFQGSNLPKQVLAQVWSHADQRKAGFLNRAEFFNALKLVTVAQSKRELTPDIVKAALYGPA**********************************************************************************************************LGGSTVSPL*******************GFGLPASSLA**********************************************************************************************************************************************************************************************WPKMTHSEVQKYTKVFVQVDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSLKEFCTALYLMERYREGRPLPTMLP*************************************************************************************************************REKIQFCSTKMQELILYKSRCDNRLNEIT************************************TFRDI***KMELYQAILK***************HIQNELEELVKILNDRCKQYGLRAKPTLLVELPFGWQPGIQEGTADWDEDWDKLEDEGFTFVKELTLEVQNVV**************************************************************************************************************************************P*WGTFDTHYDAESVWGFDTDNSKVCEELLFYI**
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MAGQTATNSDLFEAYFRRADLDGDGQISGAEAVAFFQGSNLPKQVLAQVWSHADQRKAGFLNRAEFFNALKLVTVAQSKRELTPDIVKAALYGPASARIPAPQINLAAMPSSHSRVGAPASQVSGAPSPQNVSVRGPQGLGNASTNQQSPPSQSNHFVRTPQAVLPGTTLHPQQVLSGQSMPSGGTMTAPRPPTSNVSTDWLGGSTVSPLAGSTTQLPNRGSSPSLPQEGFGLPASSLAPSVQPRPPITSGGRAGSPLAGTTSQVSDRGISASSTLDRFGLPASSVAPSVQPRPPGTSAQTPATAPKPQAPDSKSLVVSGNGFSSDSLFGDVFSASPVQPKQDVAISGSVPTSTASVPASPAPKPSLKAGPVEPVQHAFSQPPVGGQYQQGQSAGKQNQQFAVKSTPAAASTGFPIGALNSTSSQSHVPWPKMTHSEVQKYTKVFVQVDIDRDGKITGEQAYNLFLSWRLPREVLKQVWDLSDQDNDGMLSLKEFCTALYLMERYREGRPLPTMLPSTIMPDEALFSTTSQPQAPHVSGTWGPVAGVQQPHASRPPTGKPPRPFPVPQADRSVQTTPQKSKVPELEKHLMDQLSKEExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxIQFCSTKMQELILYKSRCDNRLNEITERVSGDKREVELLAKKYEEKYKQSGDVASKLTLEEATFRDIQEKKMELYQAILKMEGESGDGTLQQHADHIQNELEELVKILNDRCKQYGLRAKPTLLVELPFGWQPGIQEGTADWDEDWDKLEDEGFTFVKELTLEVQNVVAPPKPKSSSVKNETSSNKHDATASSSNIDSKSEKDASEGKDATEEKGASKEKDASKGEEISENEPAHEQNEDGLARGRPNSSAGSGATENQSKEVQDFQIMKDIGADGSPQAKETQSDEVGPESVFSGNKGFDEPSWGTFDTHYDAESVWGFDTDNSKVCEELLFYIAN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1IQ3, chain A
Confidence level:very confident
Coverage over the Query: 423-523
View the alignment between query and template
View the model in PyMOL
Template: 1QJT, chain A
Confidence level:very confident
Coverage over the Query: 7-106
View the alignment between query and template
View the model in PyMOL
Template: 3TNU, chain B
Confidence level:confident
Coverage over the Query: 653-738
View the alignment between query and template
View the model in PyMOL
Template: 3GHG, chain A
Confidence level:probable
Coverage over the Query: 598-619,630-740
View the alignment between query and template
View the model in PyMOL
Template: 1M2V, chain B
Confidence level:probable
Coverage over the Query: 274-372
View the alignment between query and template
View the model in PyMOL
Template: 2XS1, chain A
Confidence level:probable
Coverage over the Query: 542-742
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
1twf, chain Aprobable Alignment | Template Structure
1twf, chain Aprobable Alignment | Template Structure