Citrus Sinensis ID: 002122
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 964 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SMX9 | 881 | Squamosa promoter-binding | yes | no | 0.895 | 0.979 | 0.581 | 0.0 | |
| Q9S7P5 | 927 | Squamosa promoter-binding | no | no | 0.917 | 0.953 | 0.570 | 0.0 | |
| Q75LH6 | 969 | Squamosa promoter-binding | yes | no | 0.957 | 0.952 | 0.438 | 0.0 | |
| Q9LGU7 | 862 | Squamosa promoter-binding | no | no | 0.869 | 0.972 | 0.396 | 1e-176 | |
| Q6Z8M8 | 1140 | Squamosa promoter-binding | no | no | 0.568 | 0.480 | 0.347 | 2e-86 | |
| A2YX04 | 1140 | Squamosa promoter-binding | N/A | no | 0.568 | 0.480 | 0.347 | 2e-86 | |
| Q8RY95 | 1035 | Squamosa promoter-binding | no | no | 0.562 | 0.523 | 0.339 | 1e-78 | |
| Q700C2 | 988 | Squamosa promoter-binding | no | no | 0.542 | 0.529 | 0.332 | 4e-75 | |
| P93015 | 131 | Squamosa promoter-binding | no | no | 0.094 | 0.694 | 0.637 | 1e-28 | |
| Q94JW8 | 405 | Squamosa promoter-binding | no | no | 0.092 | 0.219 | 0.629 | 6e-28 |
| >sp|Q9SMX9|SPL1_ARATH Squamosa promoter-binding-like protein 1 OS=Arabidopsis thaliana GN=SPL1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1017 bits (2630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 571/982 (58%), Positives = 685/982 (69%), Gaps = 119/982 (12%)
Query: 1 METRFR--GEAHHFYGMNSMDLRAVGKKTLEWDLNDWKWDGDLFIASKLNPAPNENIGRQ 58
ME R GEA FYG +VGK+++EWDLNDWKWDGDLF+A++ GRQ
Sbjct: 1 MEARIDEGGEAQQFYG-------SVGKRSVEWDLNDWKWDGDLFLATQTTR------GRQ 47
Query: 59 FFPLAVGNSSNSSSSCSDEVNLGIENGKREVEKKRRAVVVEDHNSYEVAAGGLSLKLGGN 118
FFPL GNSSNSSSSCSDE N +KKRRAV ++ + G L+L L G
Sbjct: 48 FFPL--GNSSNSSSSCSDEGN----------DKKRRAVAIQGDTN-----GALTLNLNGE 90
Query: 119 GHPLSEREMGNWAGSSGKKTKFGGGSSSRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKA 178
L KKTK G AVCQVE+C ADLS KDYHRRHKVCEMHSKA
Sbjct: 91 SDGLF----------PAKKTKSG------AVCQVENCEADLSKVKDYHRRHKVCEMHSKA 134
Query: 179 SRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPDAVANGSSPNND 238
+ A VG ++QRFCQQCSRFH+LQEFDEGKRSCRRRLAGHNKRRRKTNP+ ANG+ P++D
Sbjct: 135 TSATVGGILQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNKRRRKTNPEPGANGN-PSDD 193
Query: 239 QTSGYLLISLLRILSNMHSSRSDQRTDQDLLSHLLRGLASPAGENGGRGISGLLQE---H 295
+S YLLI+LL+ILSNMH + DQDL+SHLL+ L S AGE G+ + LL +
Sbjct: 194 HSSNYLLITLLKILSNMH----NHTGDQDLMSHLLKSLVSHAGEQLGKNLVELLLQGGGS 249
Query: 296 QDMLNERTSA------GNSEVVQAFLANGQGCPTPFRQQLNATVSEMP-QQVSLPHDARG 348
Q LN SA E ++ F A G T R + +++ + + D
Sbjct: 250 QGSLNIGNSALLGIEQAPQEELKQFSARQDGTATENRSEKQVKMNDFDLNDIYIDSD--- 306
Query: 349 AEDQDEDVERSPVPANLGTSSIDCPSWVRQDSQQSSPPQTSGNSDSASAQSPSSSSD-AQ 407
D DVERSP P N TSS+D PSW+ QSSPPQTS NSDSAS QSPSSSS+ AQ
Sbjct: 307 ----DTDVERSPPPTNPATSSLDYPSWI----HQSSPPQTSRNSDSASDQSPSSSSEDAQ 358
Query: 408 SRTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPSDMESYIRPGCVILTIYLRQAEAAWE 467
RT RIVFKLFGKEPN+FP+VLR QILDWLSHSP+DMESYIRPGC++LTIYLRQAE AWE
Sbjct: 359 MRTGRIVFKLFGKEPNEFPIVLRGQILDWLSHSPTDMESYIRPGCIVLTIYLRQAETAWE 418
Query: 468 ELCCDLTFSLSRLLDLSNDSFWTSGWVYARVQHQIAFIYNGQVVLDTSLPPRSNNYSKIL 527
EL DL FSL +LLDLS+D WT+GW+Y RVQ+Q+AF+YNGQVV+DTSL +S +YS I+
Sbjct: 419 ELSDDLGFSLGKLLDLSDDPLWTTGWIYVRVQNQLAFVYNGQVVVDTSLSLKSRDYSHII 478
Query: 528 SVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMVQEATHE-LLDDVDGFKELDEL 586
SVKP+A+ A+E+AQF VKG+NL + TRLLC+VEGKY++QE TH+ + D FK+ E+
Sbjct: 479 SVKPLAIAATEKAQFTVKGMNLRQRGTRLLCSVEGKYLIQETTHDSTTREDDDFKDNSEI 538
Query: 587 -QCVNFSCSIPAVTGRGFIEIEDHGFSSTFFPFIVAE-EDVCSEIRMLESALEFNRTDAD 644
+CVNFSC +P ++GRGF+EIED G SS+FFPF+V E +DVCSEIR+LE+ LEF T
Sbjct: 539 VECVNFSCDMPILSGRGFMEIEDQGLSSSFFPFLVVEDDDVCSEIRILETTLEFTGT--- 595
Query: 645 VERFGKIDTKNQAMDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEW 704
D+ QAMDFIHEIGWL HR S+LG DPN +FPL RF+WLIEFSMD EW
Sbjct: 596 -------DSAKQAMDFIHEIGWLLHR----SKLGESDPNPGVFPLIRFQWLIEFSMDREW 644
Query: 705 CAVVKKLLHILLDGTVSLGEHPSLDLA-LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSD 763
CAV++KLL++ DG V GE S A L+EL LLHRAVRKNS+P+V++LLR++P +
Sbjct: 645 CAVIRKLLNMFFDGAV--GEFSSSSNATLSELCLLHRAVRKNSKPMVEMLLRYIPKQ--- 699
Query: 764 RLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAW 823
+ LFRPD GPAGLTP+HIAAGKDGSEDVLDALT+DP MVGIEAW
Sbjct: 700 -------------QRNSLFRPDAAGPAGLTPLHIAAGKDGSEDVLDALTEDPAMVGIEAW 746
Query: 824 KNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPNG-GHVVVDICGVVPDSNIYQKQNN 882
K RDS+G TPEDYARLRGH+SYIHL+Q+KINK+ HVVV+I D + ++
Sbjct: 747 KTCRDSTGFTPEDYARLRGHFSYIHLIQRKINKKSTTEDHVVVNIPVSFSDREQKEPKSG 806
Query: 883 ESTASFEIGQTPVRPTQHNCKLCHQKLGYATASRSLVYKPAMLSMVAIAAVCVCVALLFK 942
++ EI Q P CKLC KL Y T RS+ Y+PAMLSMVAIAAVCVCVALLFK
Sbjct: 807 PMASALEITQIP-------CKLCDHKLVYGTTRRSVAYRPAMLSMVAIAAVCVCVALLFK 859
Query: 943 SCPEVLYVFRPFRWEMLDYGTS 964
SCPEVLYVF+PFRWE+LDYGTS
Sbjct: 860 SCPEVLYVFQPFRWELLDYGTS 881
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Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' of AP1 promoter. Binds specifically to the 5'-GTAC-3' core sequence. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9S7P5|SPL12_ARATH Squamosa promoter-binding-like protein 12 OS=Arabidopsis thaliana GN=SPL12 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1017 bits (2629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 574/1007 (57%), Positives = 702/1007 (69%), Gaps = 123/1007 (12%)
Query: 1 METRFRGEAHHFYGMNSMDLRAVGKKTLEWDLNDWKWDGDLFIASKLNPAPNENIGRQFF 60
ME R GE +S++ GK+++EWDLNDWKW+GDLF+A++LN
Sbjct: 1 MEARIEGEVEG----HSLEYGFSGKRSVEWDLNDWKWNGDLFVATQLNHG---------- 46
Query: 61 PLAVGNSSNSSSSCSDEVNLGIENGKR---EVEKKRRAVVV---EDHNSYEVAAGGLSLK 114
SSNSSS+CSDE N+ I +R E +KKRRAV V E+ N + A L+L
Sbjct: 47 ------SSNSSSTCSDEGNVEIMERRRIEMEKKKKRRAVTVVAMEEDNLKDDDAHRLTLN 100
Query: 115 LGGNGHPLSEREMGNWAGSSGKKTKFGGGSSSRAVC-QVEDCGADLSNAKDYHRRHKVCE 173
LGGN N G+ KKTK GGG SRA+C QV++CGADLS KDYHRRHKVCE
Sbjct: 101 LGGN----------NIEGNGVKKTKLGGGIPSRAICCQVDNCGADLSKVKDYHRRHKVCE 150
Query: 174 MHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPDAVANGS 233
+HSKA+ ALVG +MQRFCQQCSRFHVL+EFDEGKRSCRRRLAGHNKRRRK NPD + NG+
Sbjct: 151 IHSKATTALVGGIMQRFCQQCSRFHVLEEFDEGKRSCRRRLAGHNKRRRKANPDTIGNGT 210
Query: 234 SPNNDQTSGYLLISLLRILSNMHSSRSDQRTDQDLLSHLLRGLASPAGENGGRGISGLLQ 293
S ++DQTS Y+LI+LL+ILSN+HS++SDQ DQDLLSHLL+ L S AGE+ GR L
Sbjct: 211 SMSDDQTSNYMLITLLKILSNIHSNQSDQTGDQDLLSHLLKSLVSQAGEHIGRN----LV 266
Query: 294 EHQDMLNERTSAGNSEVVQAFLANGQGCPTPFRQQLNATVSEMPQQVSLPHDA--RGAED 351
++ N + A L+ Q P + +VSE P Q + A R A D
Sbjct: 267 GLLQGGGGLQASQNIGNLSALLSLEQA---PREDIKHHSVSETPWQEVYANSAQERVAPD 323
Query: 352 QDE---------------------DVER-SPVPANLGTSSIDCPSWVRQDSQQSSPPQTS 389
+ E D+ER SP P N TSS+D QDS+QSSPPQTS
Sbjct: 324 RSEKQVKVNDFDLNDIYIDSDDTTDIERSSPPPTNPATSSLD----YHQDSRQSSPPQTS 379
Query: 390 --GNSDSASAQSPSSSSDAQSRTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPSDMESY 447
+ ++ SSS DAQSRTDRIVFKLFGKEPNDFP+ LR QIL+WL+H+P+DMESY
Sbjct: 380 RRNSDSASDQSPSSSSGDAQSRTDRIVFKLFGKEPNDFPVALRGQILNWLAHTPTDMESY 439
Query: 448 IRPGCVILTIYLRQAEAAWEELCCDLTFSLSRLLDLSNDSFWTSGWVYARVQHQIAFIYN 507
IRPGC++LTIYLRQ EA+WEELCCDL+FSL RLLDLS+D WT GW+Y RVQ+Q+AF +N
Sbjct: 440 IRPGCIVLTIYLRQDEASWEELCCDLSFSLRRLLDLSDDPLWTDGWLYLRVQNQLAFAFN 499
Query: 508 GQVVLDTSLPPRSNNYSKILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMVQ 567
GQVVLDTSLP RS++YS+I++V+P+AV +++AQF VKGINL R TRLLC VEG ++VQ
Sbjct: 500 GQVVLDTSLPLRSHDYSQIITVRPLAV--TKKAQFTVKGINLRRPGTRLLCTVEGTHLVQ 557
Query: 568 EATHELLDDVDGFKELDELQCVNFSCSIPAVTGRGFIEIEDH-GFSSTFFPFIVAE-EDV 625
EAT +++ D KE +E+ VNFSC +P +GRGF+EIED G SS+FFPFIV+E ED+
Sbjct: 558 EATQGGMEERDDLKENNEIDFVNFSCEMPIASGRGFMEIEDQGGLSSSFFPFIVSEDEDI 617
Query: 626 CSEIRMLESALEFNRTDADVERFGKIDTKNQAMDFIHEIGWLFHRSQSKSRLGHLDPN-T 684
CSEIR LES LEF TD+ + QAMDFIHEIGWL HRS+ KSRL D N
Sbjct: 618 CSEIRRLESTLEFTGTDSAM----------QAMDFIHEIGWLLHRSELKSRLAASDHNPE 667
Query: 685 DLFPLRRFKWLIEFSMDHEWCAVVKKLLHILL-DGTVSLGEHPSLDLALTELGLLHRAVR 743
DLF L RFK+LIEFSMD EWC V+KKLL+IL +GTV PS D AL+EL LLHRAVR
Sbjct: 668 DLFSLIRFKFLIEFSMDREWCCVMKKLLNILFEEGTVD----PSPDAALSELCLLHRAVR 723
Query: 744 KNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDG 803
KNS+P+V++LLRF P + + L LFRPD GP GLTP+HIAAGKDG
Sbjct: 724 KNSKPMVEMLLRFSPKKKNQTLAG-------------LFRPDAAGPGGLTPLHIAAGKDG 770
Query: 804 SEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPNGG-H 862
SEDVLDALT+DPGM GI+AWKN+RD++G TPEDYARLRGH+SYIHLVQ+K++++P H
Sbjct: 771 SEDVLDALTEDPGMTGIQAWKNSRDNTGFTPEDYARLRGHFSYIHLVQRKLSRKPIAKEH 830
Query: 863 VVVDICGVVPDS-NIYQKQNNES---TASFEIGQTPVRPTQHNCKLC-HQKLGYATASRS 917
VVV+I P+S NI KQ S ++S EI Q + CKLC H+++ T +S
Sbjct: 831 VVVNI----PESFNIEHKQEKRSPMDSSSLEITQI------NQCKLCDHKRVFVTTHHKS 880
Query: 918 LVYKPAMLSMVAIAAVCVCVALLFKSCPEVLYVFRPFRWEMLDYGTS 964
+ Y+PAMLSMVAIAAVCVCVALLFKSCPEVLYVF+PFRWE+L+YGTS
Sbjct: 881 VAYRPAMLSMVAIAAVCVCVALLFKSCPEVLYVFQPFRWELLEYGTS 927
|
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q75LH6|SPL6_ORYSJ Squamosa promoter-binding-like protein 6 OS=Oryza sativa subsp. japonica GN=SPL6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/999 (43%), Positives = 604/999 (60%), Gaps = 76/999 (7%)
Query: 4 RFRGEAHHFYG--MNSMDLRAVGKKTLEWDLNDWKWDGDLFIASKLNPAPNENIGRQFFP 61
R ++ H YG + D+ K+ WDLNDW+WD D F+A+ + A +
Sbjct: 5 RVGAQSRHLYGGGLGEPDMDRRDKRLFGWDLNDWRWDSDRFVATPVPAAEASGLAL---- 60
Query: 62 LAVGNSSNSSSSCSDEVNLGIENGKREVEKKRRAVVVEDHNSYEV-----AAGGLSLKLG 116
NSS SSS + ++ N + + +K++R VV++D + + G LSL++G
Sbjct: 61 ----NSSPSSSEEAGAASVRNVNARGDSDKRKRVVVIDDDDVEDDELVENGGGSLSLRIG 116
Query: 117 GNGHPLSEREMG--NWAGSSGKKTKFGGGSSSRAVCQVEDCGADLSNAKDYHRRHKVCEM 174
G+ G + +GKK + GGS S CQVE C ADL+ +DYHRRHKVCEM
Sbjct: 117 GDAVAHGAGVGGGADEEDRNGKKIRVQGGSPSGPACQVEGCTADLTGVRDYHRRHKVCEM 176
Query: 175 HSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPDAVANGSS 234
H+KA+ A+VGN +QRFCQQCSRFH LQEFDEGKRSCRRRLAGHN+RRRKT P+ GS+
Sbjct: 177 HAKATTAVVGNTVQRFCQQCSRFHPLQEFDEGKRSCRRRLAGHNRRRRKTRPEVAVGGSA 236
Query: 235 PNNDQTSGYLLISLLRILSNMHSSRSDQRTDQDLLSHLLRGLASPAGENGGRGISGLLQE 294
D+ S YLL+ LL + +N+++ ++ Q+L+S LLR L + A + + LL+
Sbjct: 237 FTEDKISSYLLLGLLGVCANLNADNAEHLRGQELISGLLRNLGAVAKSLDPKELCKLLEA 296
Query: 295 HQDMLNERTSAGNSEVVQAFL-------ANGQGCPTPF---RQQLNATVSEMPQQVSLPH 344
Q M + ++AG SE A + A PF Q A+ S +P Q P
Sbjct: 297 CQSM-QDGSNAGTSETANALVNTAVAEAAGPSNSKMPFVNGDQCGLASSSVVPVQSKSPT 355
Query: 345 DAR------------------GAEDQDEDVERSPVPANLGTSSIDCPSWVRQDSQQSSPP 386
A G E ++ E SP PA T S +CPSW+ QDS QS PP
Sbjct: 356 VATPDPPACKFKDFDLNDTYGGMEGFEDGYEGSPTPAFKTTDSPNCPSWMHQDSTQS-PP 414
Query: 387 QTSGNSDSASAQSPSS-SSDAQSRTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPSDME 445
QTSGNSDS SAQS SS + DAQ RTD+IVFKLF K P+D P VLR+QIL WLS SP+D+E
Sbjct: 415 QTSGNSDSTSAQSLSSSNGDAQCRTDKIVFKLFEKVPSDLPPVLRSQILGWLSSSPTDIE 474
Query: 446 SYIRPGCVILTIYLRQAEAAWEELCCDLTFSLSRLLDLSNDSFWTSGWVYARVQHQIAFI 505
SYIRPGC+ILT+YLR E+AW+EL +++ L +LL+ S +FW SG V+ V+HQIAF+
Sbjct: 475 SYIRPGCIILTVYLRLVESAWKELSDNMSSYLDKLLNSSTGNFWASGLVFVMVRHQIAFM 534
Query: 506 YNGQVVLDTSLPPRSNNYSKILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYM 565
+NGQ++LD L +++Y KIL V+PIA P S + F V+G+NL ++RL+C+ EG +
Sbjct: 535 HNGQLMLDRPLANSAHHYCKILCVRPIAAPFSTKVNFRVEGLNLVSDSSRLICSFEGSCI 594
Query: 566 VQEATHELLDDVDGFKELDELQCVNFSCSIPAVTGRGFIEIEDHGFSSTFFPFIVAEEDV 625
QE T ++DDV E D+++ +NF C +P+ GRGF+E+ED GFS+ FFPFI+AE+D+
Sbjct: 595 FQEDTDNIVDDV----EHDDIEYLNFCCPLPSSRGRGFVEVEDGGFSNGFFPFIIAEQDI 650
Query: 626 CSEIRMLESALEFNRTDADVERFGKIDTKNQAMDFIHEIGWLFHRSQSKSRLGHLDPNTD 685
CSE+ LES E + E+ + +NQA++F++E+GWL HR+ S+ + +
Sbjct: 651 CSEVCELESIFE----SSSHEQADDDNARNQALEFLNELGWLLHRANIISKQDKVPLAS- 705
Query: 686 LFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKN 745
F + RF+ L F+M+ EWCAV K LL L G V +G ++ L+E LLH AVR
Sbjct: 706 -FNIWRFRNLGIFAMEREWCAVTKLLLDFLFTGLVDIGSQSPEEVVLSE-NLLHAAVRMK 763
Query: 746 SRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSE 805
S +V LL + P E R + FLFRPD GP+ TP+HIAA D +E
Sbjct: 764 SAQMVRFLLGYKPNESLKRTA-----------ETFLFRPDAQGPSKFTPLHIAAATDDAE 812
Query: 806 DVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPNGGHVVV 865
DVLDALT+DPG+VGI W+NARD +G TPEDYAR RG+ +Y+++V+KKINK GHVV+
Sbjct: 813 DVLDALTNDPGLVGINTWRNARDGAGFTPEDYARQRGNDAYLNMVEKKINKHLGKGHVVL 872
Query: 866 DICGVVPDSNIYQKQNNESTASFEIGQTPVRPTQHNCKLC-HQKLGYA-TASRSLVYKPA 923
+ + + S EIG T V P +C C Q L Y + +R+ +Y+PA
Sbjct: 873 GVPSSI--HPVITDGVKPGEVSLEIGMT-VPPPAPSCNACSRQALMYPNSTARTFLYRPA 929
Query: 924 MLSMVAIAAVCVCVALLFKSCPEVLYVFRPFRWEMLDYG 962
ML+++ IA +CVCV LL +CP+V Y FRWE+L+ G
Sbjct: 930 MLTVMGIAVICVCVGLLLHTCPKV-YAAPTFRWELLERG 967
|
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. Oryza sativa subsp. japonica (taxid: 39947) |
| >sp|Q9LGU7|SPL1_ORYSJ Squamosa promoter-binding-like protein 1 OS=Oryza sativa subsp. japonica GN=SPL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 620 bits (1599), Expect = e-176, Method: Compositional matrix adjust.
Identities = 381/960 (39%), Positives = 520/960 (54%), Gaps = 122/960 (12%)
Query: 22 AVGKKTLEWDLNDWKWDGDLFIASKLNPAPNENIGRQFFPLAVGNSSNSSSSCSDEVNLG 81
+ KK LEWDLNDW+WD +LF+A+ N +P++ R+ E++ G
Sbjct: 4 GLKKKGLEWDLNDWRWDSNLFLATPSNASPSKCSRREL------------GRAEGEIDFG 51
Query: 82 IENGKREVEKKRRAVVVEDHNSYE----VAAGGLSLKLGGNGHPLSEREMGNWAGSSGKK 137
+ + KRR V ED + E G ++ G SE EM
Sbjct: 52 VVD-------KRRRVSPEDDDGEECINAATTNGDDGQISGQRGRSSEDEM---------- 94
Query: 138 TKFGGGSSSRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRF 197
+ G SSS CQV+ C +LS+A+DY++RHKVCE+H+K+ + NV RFCQQCSRF
Sbjct: 95 PRQGTCSSSGPCCQVDGCTVNLSSARDYNKRHKVCEVHTKSGVVRIKNVEHRFCQQCSRF 154
Query: 198 HVLQEFDEGKRSCRRRLAGHNKRRRKTNPDA-VANGSSPNNDQTSGYLLISLLRILSNMH 256
H LQEFDEGK+SCR RLA HN+RRRK A V S N S LL+ L ++
Sbjct: 155 HFLQEFDEGKKSCRSRLAQHNRRRRKVQVQAGVDVNSLHENHSLSNTLLLLLKQLSGLDS 214
Query: 257 SSRSDQRTDQDLLSHLLRGLASPAGENGGRGISGLLQEHQDMLNERTSAGNSEVVQAFLA 316
S S+Q + L++L++ LA+ AG Q +QDML SA + ++A
Sbjct: 215 SGPSEQINGPNYLTNLVKNLAALAGT----------QRNQDMLKNANSAAIASHTGNYVA 264
Query: 317 NGQGCPTPFRQQLNATVSEMPQQVSLPHDARGAEDQDED--VERSPVPANLGTSSIDCPS 374
G S PH G E E+ VER +L + ++
Sbjct: 265 KGNSL-----------------HDSRPHIPVGTESTAEEPTVERRVQNFDLNDAYVE--- 304
Query: 375 WVRQDSQQSSPPQTSGNSDSASAQSPSSSSDAQSRTDRIVFKLFGKEPNDFPLVLRAQIL 434
++RTD+IVFKLFGKEPNDFP LRAQIL
Sbjct: 305 ------------------------------GDENRTDKIVFKLFGKEPNDFPSDLRAQIL 334
Query: 435 DWLSHSPSDMESYIRPGCVILTIYLRQAEAAWEELCCDLTFSLSRLLDLSNDSFWTSGWV 494
WLS+ PSD+ESYIRPGC+ILTIY+R W++L D + +L+ LS D+ W +GW+
Sbjct: 335 SWLSNCPSDIESYIRPGCIILTIYMRLPNWMWDKLAADPAHWIQKLISLSTDTLWRTGWM 394
Query: 495 YARVQHQIAFIYNGQVVLDTSLPPRSNNYSKILSVKPIAVPASERAQFFVKGINLGRSAT 554
YARVQ + NG ++L + P N +IL + PIAV S A F VKG+N+ + T
Sbjct: 395 YARVQDYLTLSCNGNLMLASPWQPAIGNKHQILFITPIAVACSSTANFSVKGLNIAQPTT 454
Query: 555 RLLCAVEGKYMVQEATHELLDDVDGFKELDELQCVNFSCSIPAVTGRGFIEIEDHGFSST 614
+LLC GKY++QEAT +LLDD K QC+ FSCS P+ +GRGFIE+ED SS
Sbjct: 455 KLLCIFGGKYLIQEATEKLLDDT---KMQRGPQCLTFSCSFPSTSGRGFIEVEDLDQSSL 511
Query: 615 FFPFIVAEEDVCSEIRMLESALEF-NRTDADVERFGKIDTKNQAMDFIHEIGWLFHRSQS 673
FPF+VAEEDVCSEIR LE L + D VE+ + ++++A++F+HE GW RS
Sbjct: 512 SFPFVVAEEDVCSEIRTLEHLLNLVSFDDTLVEKNDLLASRDRALNFLHEFGWFLQRSHI 571
Query: 674 KSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALT 733
++ T+ FP RF+WL+ F++D E+CAV+KKLL L G V L +++ L
Sbjct: 572 RATSETPKDCTEGFPAARFRWLLSFAVDREFCAVIKKLLDTLFQGGVDLDVQSTVEFVLK 631
Query: 734 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKG----FLFRPDVIGP 789
+ L+ AV K S+PL+D LL + + + A +DG FLF PD+ GP
Sbjct: 632 Q-DLVFVAVNKRSKPLIDFLLTY----------TTSSAPMDGTESAAPAQFLFTPDIAGP 680
Query: 790 AGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHL 849
+ +TP+HIAA + VLDALTDDP +GI+AWKNARD++G TPEDYAR RGH SYI +
Sbjct: 681 SDITPLHIAATYSDTAGVLDALTDDPQQLGIKAWKNARDATGLTPEDYARKRGHESYIEM 740
Query: 850 VQKKINKRPNGGHVVVDICGVVPDSNIYQKQNNESTAS------FEIGQTPVRPTQHNCK 903
VQ KI+ R HV V I ++ +K ++S + E GQ +C+
Sbjct: 741 VQNKIDSRLPKAHVSVTISSTTSTTDFTEKHASQSKTTDQTAFDVEKGQQISTKPPLSCR 800
Query: 904 LCHQKLGYA-TASRSLVYKPAMLSMVAIAAVCVCVALLFKSCPEVLYVFRPFRWEMLDYG 962
C +L Y +R L +PA+LS+VAIAAVCVCV L+ + P + + PFRW L G
Sbjct: 801 QCLPELAYRHHLNRFLSTRPAVLSLVAIAAVCVCVGLIMQGPPHIGGMRGPFRWNSLRSG 860
|
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. Oryza sativa subsp. japonica (taxid: 39947) |
| >sp|Q6Z8M8|SPL15_ORYSJ Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. japonica GN=SPL15 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 321 bits (822), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 212/610 (34%), Positives = 325/610 (53%), Gaps = 62/610 (10%)
Query: 381 QQSSPP----QTSGNSDSASAQSPSSS-SDAQSRTDRIVFKLFGKEPNDFPLVLRAQILD 435
+ SPP Q+ S S S SPS+S SD Q RT RI+FKLFGKEP+ P LR +I++
Sbjct: 565 ENGSPPNPAYQSCYTSTSCSDHSPSTSNSDGQDRTGRIIFKLFGKEPSTIPGNLRGEIVN 624
Query: 436 WLSHSPSDMESYIRPGCVILTIYLRQAEAAWEELCCDLTFSLSRLLDLSNDSFWTSGWVY 495
WL HSP++ME YIRPGC++L++YL AW+EL +L ++ L+ S+ FW G
Sbjct: 625 WLKHSPNEMEGYIRPGCLVLSMYLSMPAIAWDELEENLLQRVNTLVQGSDLDFWRKGRFL 684
Query: 496 ARVQHQIAFIYNGQVVLDTSLPPRSNNYSKILSVKPIAVPASERAQFFVKGINLGRSATR 555
R Q+ +G L S R+ N ++ V PIAV + +KG NL T+
Sbjct: 685 VRTDAQLVSYKDGATRLSKSW--RTWNTPELTFVSPIAVVGGRKTSLILKGRNLTIPGTQ 742
Query: 556 LLCAVEGKYMVQE----ATHELLDDVDGFKELDELQCVNFSCSIPA----VTGRGFIEIE 607
+ C GKY+ +E A + D G + D +P + GR FIE+E
Sbjct: 743 IHCTSTGKYISKEVLCSAYPGTIYDDSGVETFD----------LPGEPHLILGRYFIEVE 792
Query: 608 DHGFSSTFFPFIVAEEDVCSEIRMLESALEFNR-----TDADVERFGKIDTKNQAMDFIH 662
+ F FP I+A VC E+R LE+ LE ++ +D ++ K++ + F++
Sbjct: 793 NR-FRGNSFPVIIANSSVCQELRSLEAELEGSQFVDGSSDDQAHDARRLKPKDEVLHFLN 851
Query: 663 EIGWLFHRSQSKSRLGHLDPN-TDL--FPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGT 719
E+GWLF ++ + + D + DL F RF++L+ FS + +WC++ K LL IL +
Sbjct: 852 ELGWLFQKAAASTSAEKSDSSGLDLMYFSTARFRYLLLFSSERDWCSLTKTLLEILAKRS 911
Query: 720 VSLGE--HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVH 777
++ E +L++ L+E+ LL+RAV++ S + LL++FV + D
Sbjct: 912 LASDELSQETLEM-LSEIHLLNRAVKRKSSHMARLLVQFVVVCPDD-------------S 957
Query: 778 KGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDY 837
K + F P+V GP GLTP+H+AA + + D++DALTDDP +G+ W +A D G +PE Y
Sbjct: 958 KLYPFLPNVAGPGGLTPLHLAASIEDAVDIVDALTDDPQQIGLSCWHSALDDDGQSPETY 1017
Query: 838 ARLRGHYSYIHLV-QKKINKRPNGGHVVVDICGVVPDSNIYQKQNNESTASFEIGQTPVR 896
A+LR + +Y LV QK ++++ N ++V + D + + N+S I +R
Sbjct: 1018 AKLRNNNAYNELVAQKLVDRKNNQVTIMVGKEEIHMDQSGNVGEKNKSA----IQALQIR 1073
Query: 897 PTQHNCKLCHQKLGYATASRSLVYKPAMLSMVAIAAVCVCVALLFKSCPEVLYVF---RP 953
L L SR L+ +P + SM+AIAAVCVCV + ++ L F R
Sbjct: 1074 SCNQCAILDAGLLRRPMHSRGLLARPYIHSMLAIAAVCVCVCVFMRA----LLRFNSGRS 1129
Query: 954 FRWEMLDYGT 963
F+WE LD+GT
Sbjct: 1130 FKWERLDFGT 1139
|
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. Oryza sativa subsp. japonica (taxid: 39947) |
| >sp|A2YX04|SPL15_ORYSI Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. indica GN=SPL15 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 321 bits (822), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 212/610 (34%), Positives = 325/610 (53%), Gaps = 62/610 (10%)
Query: 381 QQSSPP----QTSGNSDSASAQSPSSS-SDAQSRTDRIVFKLFGKEPNDFPLVLRAQILD 435
+ SPP Q+ S S S SPS+S SD Q RT RI+FKLFGKEP+ P LR +I++
Sbjct: 565 ENGSPPNPAYQSCYTSTSCSDHSPSTSNSDGQDRTGRIIFKLFGKEPSTIPGNLRGEIVN 624
Query: 436 WLSHSPSDMESYIRPGCVILTIYLRQAEAAWEELCCDLTFSLSRLLDLSNDSFWTSGWVY 495
WL HSP++ME YIRPGC++L++YL AW+EL +L ++ L+ S+ FW G
Sbjct: 625 WLKHSPNEMEGYIRPGCLVLSMYLSMPAIAWDELEENLLQRVNTLVQGSDLDFWRKGRFL 684
Query: 496 ARVQHQIAFIYNGQVVLDTSLPPRSNNYSKILSVKPIAVPASERAQFFVKGINLGRSATR 555
R Q+ +G L S R+ N ++ V PIAV + +KG NL T+
Sbjct: 685 VRTDAQLVSYKDGATRLSKSW--RTWNTPELTFVSPIAVVGGRKTSLILKGRNLTIPGTQ 742
Query: 556 LLCAVEGKYMVQE----ATHELLDDVDGFKELDELQCVNFSCSIPA----VTGRGFIEIE 607
+ C GKY+ +E A + D G + D +P + GR FIE+E
Sbjct: 743 IHCTSTGKYISKEVLCSAYPGTIYDDSGVETFD----------LPGEPHLILGRYFIEVE 792
Query: 608 DHGFSSTFFPFIVAEEDVCSEIRMLESALEFNR-----TDADVERFGKIDTKNQAMDFIH 662
+ F FP I+A VC E+R LE+ LE ++ +D ++ K++ + F++
Sbjct: 793 NR-FRGNSFPVIIANSSVCQELRSLEAELEGSQFVDGSSDDQAHDARRLKPKDEVLHFLN 851
Query: 663 EIGWLFHRSQSKSRLGHLDPN-TDL--FPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGT 719
E+GWLF ++ + + D + DL F RF++L+ FS + +WC++ K LL IL +
Sbjct: 852 ELGWLFQKAAASTSAEKSDSSGLDLMYFSTARFRYLLLFSSERDWCSLTKTLLEILAKRS 911
Query: 720 VSLGE--HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVH 777
++ E +L++ L+E+ LL+RAV++ S + LL++FV + D
Sbjct: 912 LASDELSQETLEM-LSEIHLLNRAVKRKSSHMARLLVQFVVVCPDD-------------S 957
Query: 778 KGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDY 837
K + F P+V GP GLTP+H+AA + + D++DALTDDP +G+ W +A D G +PE Y
Sbjct: 958 KLYPFLPNVAGPGGLTPLHLAASIEDAVDIVDALTDDPQQIGLSCWHSALDDDGQSPETY 1017
Query: 838 ARLRGHYSYIHLV-QKKINKRPNGGHVVVDICGVVPDSNIYQKQNNESTASFEIGQTPVR 896
A+LR + +Y LV QK ++++ N ++V + D + + N+S I +R
Sbjct: 1018 AKLRNNNAYNELVAQKLVDRKNNQVTIMVGKEEIHMDQSGNVGEKNKSA----IQALQIR 1073
Query: 897 PTQHNCKLCHQKLGYATASRSLVYKPAMLSMVAIAAVCVCVALLFKSCPEVLYVF---RP 953
L L SR L+ +P + SM+AIAAVCVCV + ++ L F R
Sbjct: 1074 SCNQCAILDAGLLRRPMHSRGLLARPYIHSMLAIAAVCVCVCVFMRA----LLRFNSGRS 1129
Query: 954 FRWEMLDYGT 963
F+WE LD+GT
Sbjct: 1130 FKWERLDFGT 1139
|
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. Oryza sativa subsp. indica (taxid: 39946) |
| >sp|Q8RY95|SPL14_ARATH Squamosa promoter-binding-like protein 14 OS=Arabidopsis thaliana GN=SPL14 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 295 bits (755), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 200/589 (33%), Positives = 314/589 (53%), Gaps = 47/589 (7%)
Query: 387 QTSGNSDSASAQSPSS-SSDAQSRTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPSDME 445
Q SG + S S SP S +SDAQ RT +IVFKL K+P+ P LR++I +WLS+ PS+ME
Sbjct: 481 QQSGYASSGSDYSPPSLNSDAQDRTGKIVFKLLDKDPSQLPGTLRSEIYNWLSNIPSEME 540
Query: 446 SYIRPGCVILTIYLRQAEAAWEELCCDLTFSLSRLLDLSNDSFWTSGWVYARVQHQIAFI 505
SYIRPGCV+L++Y+ + AAWE+L L L LL S FW + Q+A
Sbjct: 541 SYIRPGCVVLSVYVAMSPAAWEQLEQKLLQRLGVLLQNSPSDFWRNARFIVNTGRQLASH 600
Query: 506 YNGQVVLDTSLPPRSNNYSKILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYM 565
NG+V S R+ N +++SV P+AV A E V+G +L + C G YM
Sbjct: 601 KNGKVRCSKSW--RTWNSPELISVSPVAVVAGEETSLVVRGRSLTNDGISIRCTHMGSYM 658
Query: 566 VQEATHELLDDVDGFKELDELQCVNFSCSI--PAVTGRGFIEIEDHGFSSTFFPFIVAEE 623
E T + DEL +F P GR FIE+E+ GF FP I+A
Sbjct: 659 AMEVTRAVCRQTI----FDELNVNSFKVQNVHPGFLGRCFIEVEN-GFRGDSFPLIIANA 713
Query: 624 DVCSEIRMLESALEFNRTDADVERFGKID----TKNQAMDFIHEIGWLFHRSQSKSRLGH 679
+C E+ L D E+ + ++ + + F++E+GWLF ++Q+
Sbjct: 714 SICKELNRLGEEFHPKSQDMTEEQAQSSNRGPTSREEVLCFLNELGWLFQKNQT----SE 769
Query: 680 LDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE--HPSLDLALTELGL 737
L +D F L RFK+L+ S++ ++CA+++ LL +L++ + E +LD+ L E+ L
Sbjct: 770 LREQSD-FSLARFKFLLVCSVERDYCALIRTLLDMLVERNLVNDELNREALDM-LAEIQL 827
Query: 738 LHRAVRKNSRPLVDLLLRFV--PLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPI 795
L+RAV++ S +V+LL+ ++ PL +S + F+F P++ GP G+TP+
Sbjct: 828 LNRAVKRKSTKMVELLIHYLVNPLTLSS-------------SRKFVFLPNITGPGGITPL 874
Query: 796 HIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKIN 855
H+AA GS+D++D LT+DP +G+ +W RD++G TP YA +R +++Y LV +K+
Sbjct: 875 HLAACTSGSDDMIDLLTNDPQEIGLSSWNTLRDATGQTPYSYAAIRNNHNYNSLVARKLA 934
Query: 856 KRPNGGHVVVDICGVVPDSNIYQKQNNESTASFEIGQ-TPVRPTQHNCKLCHQKLGYATA 914
+ N V ++I V D K+ S E+ + + + L +Q+ +
Sbjct: 935 DKRN-KQVSLNIEHEVVDQTGLSKR-----LSLEMNKSSSSCASCATVALKYQR--RVSG 986
Query: 915 SRSLVYKPAMLSMVAIAAVCVCVALLFKSCPEVLYVFRPFRWEMLDYGT 963
S+ L P + SM+A+A VCVCV + + P ++ F W LDYG+
Sbjct: 987 SQRLFPTPIIHSMLAVATVCVCVCVFMHAFP-IVRQGSHFSWGGLDYGS 1034
|
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May play a role in plant development. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q700C2|SPL16_ARATH Squamosa promoter-binding-like protein 16 OS=Arabidopsis thaliana GN=SPL16 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 283 bits (725), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 197/592 (33%), Positives = 313/592 (52%), Gaps = 69/592 (11%)
Query: 389 SGNSDSASAQSPSS-SSDAQSRTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPSDMESY 447
SG + S S SP S +S+AQ RT +I FKLF K+P+ P LR +I WLS PSDMES+
Sbjct: 448 SGYASSGSDYSPPSLNSNAQERTGKISFKLFEKDPSQLPNTLRTEIFRWLSSFPSDMESF 507
Query: 448 IRPGCVILTIYLRQAEAAWEELCCDLTFSLSRLLDLSNDS-FWTSGWVYARVQHQIAFIY 506
IRPGCVIL++Y+ + +AWE+L +L L R+ L DS FW++ Q+A
Sbjct: 508 IRPGCVILSVYVAMSASAWEQLEENL---LQRVRSLVQDSEFWSNSRFLVNAGRQLASHK 564
Query: 507 NGQVVLDTSLPPRSNNYSKILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMV 566
+G++ L S R+ N ++++V P+AV A E V+G NL RL CA G Y
Sbjct: 565 HGRIRLSKSW--RTLNLPELITVSPLAVVAGEETALIVRGRNLTNDGMRLRCAHMGNYAS 622
Query: 567 QEAT---HELLDDVDGFKELDELQCVNFSC-SIPAVT-GRGFIEIEDHGFSSTFFPFIVA 621
E T H L ++DEL +F S +V+ GR FIE+E+ G FP I+A
Sbjct: 623 MEVTGREHRL-------TKVDELNVSSFQVQSASSVSLGRCFIELEN-GLRGDNFPLIIA 674
Query: 622 EEDVCSEIRMLESALEFNRTDADVERFGKID---TKNQAMDFIHEIGWLFHRSQSKSRLG 678
+C E+ LE EF+ D E+ +D ++ + + F++E+GWLF R + G
Sbjct: 675 NATICKELNRLEE--EFHPKDVIEEQIQNLDRPRSREEVLCFLNELGWLFQRKWTSDIHG 732
Query: 679 HLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLD---GTVSLGEHPSLDLALTEL 735
D F L RFK+L+ S++ ++C++++ +L ++++ G L SLD+ L ++
Sbjct: 733 EPD-----FSLPRFKFLLVCSVERDYCSLIRTVLDMMVERNLGKDGLLNKESLDM-LADI 786
Query: 736 GLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPI 795
LL+RA+++ + + + L+ + V+ + F+F P + GP +TP+
Sbjct: 787 QLLNRAIKRRNTKMAETLIHYS---------------VNPSTRNFIFLPSIAGPGDITPL 831
Query: 796 HIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKIN 855
H+AA S+D++DALT+DP +G+ W D++G TP YA +R ++SY LV +K+
Sbjct: 832 HLAASTSSSDDMIDALTNDPQEIGLSCWNTLVDATGQTPFSYAAMRDNHSYNTLVARKLA 891
Query: 856 KRPNGGHVVVDICGVVPDSNIYQKQNNESTASFEIGQTPVRPTQHNCKLCHQ-KLGY--- 911
+ N G + ++I + + ++ ++E + +C C L Y
Sbjct: 892 DKRN-GQISLNIENGIDQIGLSKRLSSE--------------LKRSCNTCASVALKYQRK 936
Query: 912 ATASRSLVYKPAMLSMVAIAAVCVCVALLFKSCPEVLYVFRPFRWEMLDYGT 963
+ SR L P + SM+A+A VCVCV + + P V F W LDYG+
Sbjct: 937 VSGSRRLFPTPIIHSMLAVATVCVCVCVFMHAFPMVRQGSH-FSWGGLDYGS 987
|
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. Arabidopsis thaliana (taxid: 3702) |
| >sp|P93015|SPL3_ARATH Squamosa promoter-binding-like protein 3 OS=Arabidopsis thaliana GN=SPL3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 68/91 (74%)
Query: 137 KTKFGGGSSSRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSR 196
K + G +SS VCQVE C AD+S AK YH+RHKVC+ H+KA + + QRFCQQCSR
Sbjct: 41 KKQKGKATSSSGVCQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCSR 100
Query: 197 FHVLQEFDEGKRSCRRRLAGHNKRRRKTNPD 227
FH L EFDE KRSCRRRLAGHN+RRRK+ D
Sbjct: 101 FHALSEFDEAKRSCRRRLAGHNERRRKSTTD 131
|
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' of AP1 promoter. Binds specifically to the 5'-GTAC-3' core sequence. Promotes both vegetative phase change and flowering. Regulates phase-specific patterns of leaf epidermal differentiation and flowering time, but does not seem to affect leaf shape. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q94JW8|SPL6_ARATH Squamosa promoter-binding-like protein 6 OS=Arabidopsis thaliana GN=SPL6 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 67/89 (75%)
Query: 135 GKKTKFGGGSSSRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQC 194
KK++ S +CQV C DLS++KDYH+RH+VCE HSK S +V + QRFCQQC
Sbjct: 109 SKKSRASNLCSQNPLCQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQC 168
Query: 195 SRFHVLQEFDEGKRSCRRRLAGHNKRRRK 223
SRFH L EFD+GKRSCRRRLAGHN+RRRK
Sbjct: 169 SRFHFLSEFDDGKRSCRRRLAGHNERRRK 197
|
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. Arabidopsis thaliana (taxid: 3702) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 964 | ||||||
| 255548291 | 1012 | conserved hypothetical protein [Ricinus | 0.995 | 0.948 | 0.705 | 0.0 | |
| 225437714 | 997 | PREDICTED: squamosa promoter-binding-lik | 0.995 | 0.962 | 0.705 | 0.0 | |
| 359480217 | 963 | PREDICTED: squamosa promoter-binding-lik | 0.990 | 0.991 | 0.712 | 0.0 | |
| 356499594 | 1010 | PREDICTED: squamosa promoter-binding-lik | 0.990 | 0.945 | 0.655 | 0.0 | |
| 449461697 | 1013 | PREDICTED: squamosa promoter-binding-lik | 0.997 | 0.949 | 0.650 | 0.0 | |
| 449518123 | 1014 | PREDICTED: LOW QUALITY PROTEIN: squamosa | 0.998 | 0.949 | 0.648 | 0.0 | |
| 357442095 | 1003 | SQUAMOSA promoter binding protein [Medic | 0.984 | 0.946 | 0.647 | 0.0 | |
| 297744051 | 860 | unnamed protein product [Vitis vinifera] | 0.889 | 0.996 | 0.653 | 0.0 | |
| 357511495 | 994 | SQUAMOSA promoter binding protein [Medic | 0.958 | 0.929 | 0.617 | 0.0 | |
| 225432161 | 1029 | PREDICTED: squamosa promoter-binding-lik | 0.986 | 0.924 | 0.571 | 0.0 |
| >gi|255548291|ref|XP_002515202.1| conserved hypothetical protein [Ricinus communis] gi|223545682|gb|EEF47186.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1410 bits (3651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 717/1016 (70%), Positives = 811/1016 (79%), Gaps = 56/1016 (5%)
Query: 1 METRFRGEA--HHFYGMNSMDLRAVGKKTLEWDLNDWKWDGDLFIASKLNPAPNENIGRQ 58
ME RF GEA HHFYGM++ DLRAV K++LEWDLNDWKWDGDLFIAS LNP P+ N+ RQ
Sbjct: 1 MEARFGGEAQAHHFYGMSAADLRAVEKRSLEWDLNDWKWDGDLFIASPLNPVPSSNMSRQ 60
Query: 59 FFPLAVGNSSNSSSSCS-----DEVNLGIENGKREVEKKRRAVVVEDHNSYEVAAGGLSL 113
FFP+A G +N +SS S DEVNLGIE GKRE+EK+RR +V+ED N + G LSL
Sbjct: 61 FFPIATGTPTNGNSSNSSSSCSDEVNLGIEKGKRELEKRRRVIVIEDDNLNDEGVGSLSL 120
Query: 114 KLGGNGHPLSEREMGNWAGSSGKKTKFGGGSSSRAVCQVEDCGADLSNAKDYHRRHKVCE 173
KLGG+G P+SERE+GNW G+SGKKTK GGS SRAVCQVEDCGADLS+AKDYHRRHKVCE
Sbjct: 121 KLGGHGFPVSEREIGNWEGNSGKKTKLVGGSMSRAVCQVEDCGADLSSAKDYHRRHKVCE 180
Query: 174 MHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPDAVANGS 233
MHSKAS+ALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPD V N S
Sbjct: 181 MHSKASKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPDTVGNAS 240
Query: 234 SPNNDQTSGYLLISLLRILSNMHSSRSDQRTDQDLLSHLLRGLASPAGENGGRGISGLLQ 293
+ N++QTS YLLISLL+ILSNMHS+RSDQ TDQDLLSHLLR LAS + E+GG+ +SGLLQ
Sbjct: 241 TLNDEQTSSYLLISLLKILSNMHSNRSDQVTDQDLLSHLLRSLASQSMEHGGKKLSGLLQ 300
Query: 294 EHQDMLNERTSAGNSEVVQAFLANGQGCPTPFRQQLNATVSEMPQQVSLPHDARG----- 348
E + +LN TS NSEV F+ N G + L S M Q+V H A G
Sbjct: 301 EPRALLNGGTSFRNSEVFLTFILNALGLLRSLKLHLIVPFSGMSQRVLCSHGANGPNVQT 360
Query: 349 ---------------------------------------AEDQDEDVERSPVPANLGTSS 369
++D ED+ERSPVP N+GTSS
Sbjct: 361 SSSMKPSIPNNYPAYSEVRDSTAVQVKMNNFDLNDIYIDSDDGAEDIERSPVPTNMGTSS 420
Query: 370 IDCPSWVRQDSQQSSPPQTSGN-SDSASAQSPSSSSDAQSRTDRIVFKLFGKEPNDFPLV 428
+DCPSW++QDS QSSPPQTSGN +++ SSS DAQSRTDRI+FKLFGKEPNDFPLV
Sbjct: 421 LDCPSWIQQDSHQSSPPQTSGNSDSASAQSPSSSSGDAQSRTDRIIFKLFGKEPNDFPLV 480
Query: 429 LRAQILDWLSHSPSDMESYIRPGCVILTIYLRQAEAAWEELCCDLTFSLSRLLDLSNDSF 488
LRAQILDWLSHSP+D+ESYIRPGCVILTIYLRQAEAAWEELCC+L+ SLSRLLD+S+++F
Sbjct: 481 LRAQILDWLSHSPTDIESYIRPGCVILTIYLRQAEAAWEELCCNLSSSLSRLLDVSDNAF 540
Query: 489 WTSGWVYARVQHQIAFIYNGQVVLDTSLPPRSNNYSKILSVKPIAVPASERAQFFVKGIN 548
W +GW Y RVQHQIAFIYNGQVV+DTSLP RSNN+SKI SVKPIA+PA+ERAQF +KGIN
Sbjct: 541 WRTGWAYIRVQHQIAFIYNGQVVVDTSLPLRSNNHSKIASVKPIAIPAAERAQFVIKGIN 600
Query: 549 LGRSATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQCVNFSCSIPAVTGRGFIEIED 608
L R ATRLLCAVEGKYM+QE T E++DD+D DELQC+ F CSIP V+GRGFIEIED
Sbjct: 601 LSRPATRLLCAVEGKYMLQENTEEMMDDIDNINAHDELQCIKFCCSIPMVSGRGFIEIED 660
Query: 609 HGFSSTFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQAMDFIHEIGWLF 668
HGFSS+FFPFIVAEEDVC EIRMLE LEF TDAD+ GKI+ KNQAMDFI+EIGWL
Sbjct: 661 HGFSSSFFPFIVAEEDVCLEIRMLEGTLEFVGTDADLGGSGKIEAKNQAMDFINEIGWLL 720
Query: 669 HRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSL 728
HRSQ SRLGHL+P TDLFPL RFKWL+EFSMDHEWCAVV KLL+IL +G V GEH SL
Sbjct: 721 HRSQLHSRLGHLNPCTDLFPLSRFKWLMEFSMDHEWCAVVTKLLNILHNGIVGTGEHSSL 780
Query: 729 DLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIG 788
+LAL+E+GLLHRAVRKNSR LV+LLLR+VP ++ G NK VDG H FLFRPDV G
Sbjct: 781 NLALSEMGLLHRAVRKNSRSLVELLLRYVP----EKSGPGNKLPVDGSHVNFLFRPDVTG 836
Query: 789 PAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIH 848
PAGLTP+HIAAGKDGSEDVLDALTDDPGMVG+EAWK A DS+G TPE YARLRGHYSYIH
Sbjct: 837 PAGLTPLHIAAGKDGSEDVLDALTDDPGMVGVEAWKKAHDSTGFTPEGYARLRGHYSYIH 896
Query: 849 LVQKKINKRPNGGHVVVDICGVVPDSNIYQKQNNESTASFEIGQTPVRPTQHNCKLCHQK 908
LVQKKINKRP GHVV+DI G + + N+ QKQN TASFE+GQ VR Q +CKLCHQK
Sbjct: 897 LVQKKINKRPAAGHVVLDIPGTLSECNVNQKQNEGVTASFEVGQPAVRSIQRSCKLCHQK 956
Query: 909 LGYATASRSLVYKPAMLSMVAIAAVCVCVALLFKSCPEVLYVFRPFRWEMLDYGTS 964
L Y TA RSL+Y+PAMLSMVAIAAVCVCVALLFKSCPEV+YVFRPFRWE+LD+GTS
Sbjct: 957 LDYGTAGRSLLYRPAMLSMVAIAAVCVCVALLFKSCPEVVYVFRPFRWELLDFGTS 1012
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225437714|ref|XP_002273228.1| PREDICTED: squamosa promoter-binding-like protein 12-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1346 bits (3484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 706/1001 (70%), Positives = 802/1001 (80%), Gaps = 41/1001 (4%)
Query: 1 METRFRGEAHHFYGMNSMDLRAVGKKTLEWDLNDWKWDGDLFIASKLNPAPNENIGRQFF 60
ME + GEAHHFYG+ + DLR VGK++ EWD N+WKWDGDLFIAS +NP P++ +QFF
Sbjct: 1 MEAKIGGEAHHFYGIGTSDLRVVGKRSSEWDSNEWKWDGDLFIASPMNPVPSDYTSQQFF 60
Query: 61 PLA-----VGNSSNSSSSCSDEVNLGIENGKREVEKKRRAVVVEDHNSYEVAAGGLSLKL 115
P G SSNSSSSCSDEVNLGIE KRE+EK+RR +VV+D N G LSLKL
Sbjct: 61 PHGSAIPVTGGSSNSSSSCSDEVNLGIEKRKRELEKRRRVIVVQDDND---ETGTLSLKL 117
Query: 116 GGNGHPLSEREMGNWAGSSGKKTKFGGGSSSRAVCQVEDCGADLSNAKDYHRRHKVCEMH 175
GG+GH +SERE+GNW G+SGKKTK G SSSRAVCQVEDCGADLS AKDYHRRHKVCEMH
Sbjct: 118 GGHGHSVSEREVGNWEGTSGKKTKLAGVSSSRAVCQVEDCGADLSKAKDYHRRHKVCEMH 177
Query: 176 SKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPDAVANGSSP 235
SKA ALVGN MQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKT+PDA NG+S
Sbjct: 178 SKAGCALVGNDMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDAAGNGNSL 237
Query: 236 NNDQTSGYLLISLLRILSNMHSS-RSDQRTDQDLLSHLLRGLASPAGENGGRGISGLLQE 294
N+DQ SGYLLISLLRILSNMHS+ +SDQ DQDLLSHLLR LAS G NG R ISGLLQE
Sbjct: 238 NDDQASGYLLISLLRILSNMHSNDKSDQTKDQDLLSHLLRSLASYGGTNGSRNISGLLQE 297
Query: 295 HQDMLNERTSAGNSEVVQAFLANGQGCPTPFRQQLNATVSEM--------------PQQV 340
Q +LN+ S GN+EVV A L NG P + L SE+ Q
Sbjct: 298 SQ-LLNDGISVGNTEVVSALLPNGSQAPPRPIKHLKVPESEILPKGVHADEARVGNMQMT 356
Query: 341 SLPHDARG---------------AEDQDEDVERSPVPANLGTSSIDCPSWVRQDSQQSSP 385
SL G ++D ED+ERSPVP NLGT S++CPSWV+QDS QSSP
Sbjct: 357 SLRDSTAGQIKLNNFDLNDIYIDSDDGMEDLERSPVPENLGTGSLECPSWVQQDSHQSSP 416
Query: 386 PQTSGNSDSASAQSPSSS-SDAQSRTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPSDM 444
PQTSGNSDSASAQSPSSS +AQSRTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSP+D+
Sbjct: 417 PQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPTDI 476
Query: 445 ESYIRPGCVILTIYLRQAEAAWEELCCDLTFSLSRLLDLSNDSFWTSGWVYARVQHQIAF 504
ESYIRPGC++LTIYLR E+ WEELCCDL SLSRLLD+SND+FW +GWVY RVQHQIAF
Sbjct: 477 ESYIRPGCIVLTIYLRLPESTWEELCCDLGSSLSRLLDVSNDTFWRTGWVYIRVQHQIAF 536
Query: 505 IYNGQVVLDTSLPPRSNNYSKILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKY 564
IYNGQVV+D SLP ++NNYSKILS+KPIA+ SE AQF VKG NL R ATRLLCA+EGKY
Sbjct: 537 IYNGQVVVDMSLPLKTNNYSKILSIKPIAISMSEEAQFLVKGFNLSRPATRLLCALEGKY 596
Query: 565 MVQEATHELLDDVDGFKELDELQCVNFSCSIPAVTGRGFIEIEDHGFSSTFFPFIVAEED 624
+V+EATHEL+DD+D KE DELQ +NFSCSIP +TGRGFIE+EDHG SS+FFP IVAE+D
Sbjct: 597 LVKEATHELMDDIDSVKEHDELQYLNFSCSIPKMTGRGFIEVEDHGLSSSFFPIIVAEKD 656
Query: 625 VCSEIRMLESALEFNRTDADVERFGKIDTKNQAMDFIHEIGWLFHRSQSKSRLGHLDPNT 684
VCSEI MLES +E D D GK++TKNQAMDFIHEIGWL HRSQ KSRLGHLDPN
Sbjct: 657 VCSEICMLESTIEMTDIDEDGCGTGKLETKNQAMDFIHEIGWLLHRSQLKSRLGHLDPNA 716
Query: 685 DLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRK 744
DLF +RFKWL+EFSMD +WCAVVKKLL I+LDGTV GE+PSL LA E+GLLHRAVR+
Sbjct: 717 DLFSFKRFKWLMEFSMDRDWCAVVKKLLDIMLDGTVGAGEYPSLKLAFMEMGLLHRAVRR 776
Query: 745 NSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS 804
NSRPLV+LLLR+VP VSD L S++K++V+G FL RPDV+GPAGLTP+HIAAG+DGS
Sbjct: 777 NSRPLVELLLRYVPERVSDVLASDDKSMVEGGRASFLLRPDVVGPAGLTPLHIAAGRDGS 836
Query: 805 EDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPNGGHVV 864
EDVLDALTDDPGMVG+EAWK+ARDS+G TPEDYARLRGHYSYIHLVQKKIN+R GHVV
Sbjct: 837 EDVLDALTDDPGMVGVEAWKSARDSTGFTPEDYARLRGHYSYIHLVQKKINRRLGNGHVV 896
Query: 865 VDICGVVPDSNIYQKQNNESTASFEIGQTPVRPT-QHNCKLCHQKLGYATASRSLVYKPA 923
VD+ + D ++ QKQN+E+T F+I +T +RP Q CK C+ K+ Y ASRSL+Y+PA
Sbjct: 897 VDVPSHLSDYSVNQKQNDEATTGFQIERTTLRPIQQQQCKRCNHKVAYGNASRSLLYRPA 956
Query: 924 MLSMVAIAAVCVCVALLFKSCPEVLYVFRPFRWEMLDYGTS 964
MLSMVAIAAVCVCVALLFKS PEVLYVF PFRWE+LDYGTS
Sbjct: 957 MLSMVAIAAVCVCVALLFKSSPEVLYVFTPFRWELLDYGTS 997
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359480217|ref|XP_003632418.1| PREDICTED: squamosa promoter-binding-like protein 12-like isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1333 bits (3449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 693/972 (71%), Positives = 791/972 (81%), Gaps = 17/972 (1%)
Query: 1 METRFRGEAHHFYGMNSMDLRAVGKKTLEWDLNDWKWDGDLFIASKLNPAPNENIGRQFF 60
ME + GEAHHFYG+ + DLR VGK++ EWD N+WKWDGDLFIAS +NP P++ +QFF
Sbjct: 1 MEAKIGGEAHHFYGIGTSDLRVVGKRSSEWDSNEWKWDGDLFIASPMNPVPSDYTSQQFF 60
Query: 61 PLA-----VGNSSNSSSSCSDEVNLGIENGKREVEKKRRAVVVEDHNSYEVAAGGLSLKL 115
P G SSNSSSSCSDEVNLGIE KRE+EK+RR +VV+D N G LSLKL
Sbjct: 61 PHGSAIPVTGGSSNSSSSCSDEVNLGIEKRKRELEKRRRVIVVQDDND---ETGTLSLKL 117
Query: 116 GGNGHPLSEREMGNWAGSSGKKTKFGGGSSSRAVCQVEDCGADLSNAKDYHRRHKVCEMH 175
GG+GH +SERE+GNW G+SGKKTK G SSSRAVCQVEDCGADLS AKDYHRRHKVCEMH
Sbjct: 118 GGHGHSVSEREVGNWEGTSGKKTKLAGVSSSRAVCQVEDCGADLSKAKDYHRRHKVCEMH 177
Query: 176 SKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPDAVANGSSP 235
SKA ALVGN MQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKT+PDA NG+S
Sbjct: 178 SKAGCALVGNDMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDAAGNGNSL 237
Query: 236 NNDQTSGYLLISLLRILSNMHSSRSDQRTDQDLLSHLLRGLASPAGENGGRGISGLLQEH 295
N+DQ SGYLLISLLRILSNMH Q DQDLLSHLLR LAS G NG R ISGLLQE
Sbjct: 238 NDDQASGYLLISLLRILSNMHY----QTKDQDLLSHLLRSLASYGGTNGSRNISGLLQES 293
Query: 296 QDMLNERTSAGNSEVVQAFLANGQGCPTPFRQQLNATVSEMP-QQVSLPHDARGAEDQDE 354
Q +LN+ S GN+EV P + + ++T ++ L ++D E
Sbjct: 294 Q-LLNDGISVGNTEVPGIMFPIKDSLPV-YSEVRDSTAGQIKLNNFDLNDIYIDSDDGME 351
Query: 355 DVERSPVPANLGTSSIDCPSWVRQDSQQSSPPQTSGNSDSASAQSPSSS-SDAQSRTDRI 413
D+ERSPVP NLGT S++CPSWV+QDS QSSPPQTSGNSDSASAQSPSSS +AQSRTDRI
Sbjct: 352 DLERSPVPENLGTGSLECPSWVQQDSHQSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRI 411
Query: 414 VFKLFGKEPNDFPLVLRAQILDWLSHSPSDMESYIRPGCVILTIYLRQAEAAWEELCCDL 473
VFKLFGKEPNDFPLVLRAQILDWLSHSP+D+ESYIRPGC++LTIYLR E+ WEELCCDL
Sbjct: 412 VFKLFGKEPNDFPLVLRAQILDWLSHSPTDIESYIRPGCIVLTIYLRLPESTWEELCCDL 471
Query: 474 TFSLSRLLDLSNDSFWTSGWVYARVQHQIAFIYNGQVVLDTSLPPRSNNYSKILSVKPIA 533
SLSRLLD+SND+FW +GWVY RVQHQIAFIYNGQVV+D SLP ++NNYSKILS+KPIA
Sbjct: 472 GSSLSRLLDVSNDTFWRTGWVYIRVQHQIAFIYNGQVVVDMSLPLKTNNYSKILSIKPIA 531
Query: 534 VPASERAQFFVKGINLGRSATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQCVNFSC 593
+ SE AQF VKG NL R ATRLLCA+EGKY+V+EATHEL+DD+D KE DELQ +NFSC
Sbjct: 532 ISMSEEAQFLVKGFNLSRPATRLLCALEGKYLVKEATHELMDDIDSVKEHDELQYLNFSC 591
Query: 594 SIPAVTGRGFIEIEDHGFSSTFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDT 653
SIP +TGRGFIE+EDHG SS+FFP IVAE+DVCSEI MLES +E D D GK++T
Sbjct: 592 SIPKMTGRGFIEVEDHGLSSSFFPIIVAEKDVCSEICMLESTIEMTDIDEDGCGTGKLET 651
Query: 654 KNQAMDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLH 713
KNQAMDFIHEIGWL HRSQ KSRLGHLDPN DLF +RFKWL+EFSMD +WCAVVKKLL
Sbjct: 652 KNQAMDFIHEIGWLLHRSQLKSRLGHLDPNADLFSFKRFKWLMEFSMDRDWCAVVKKLLD 711
Query: 714 ILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 773
I+LDGTV GE+PSL LA E+GLLHRAVR+NSRPLV+LLLR+VP VSD L S++K++V
Sbjct: 712 IMLDGTVGAGEYPSLKLAFMEMGLLHRAVRRNSRPLVELLLRYVPERVSDVLASDDKSMV 771
Query: 774 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGST 833
+G FL RPDV+GPAGLTP+HIAAG+DGSEDVLDALTDDPGMVG+EAWK+ARDS+G T
Sbjct: 772 EGGRASFLLRPDVVGPAGLTPLHIAAGRDGSEDVLDALTDDPGMVGVEAWKSARDSTGFT 831
Query: 834 PEDYARLRGHYSYIHLVQKKINKRPNGGHVVVDICGVVPDSNIYQKQNNESTASFEIGQT 893
PEDYARLRGHYSYIHLVQKKIN+R GHVVVD+ + D ++ QKQN+E+T F+I +T
Sbjct: 832 PEDYARLRGHYSYIHLVQKKINRRLGNGHVVVDVPSHLSDYSVNQKQNDEATTGFQIERT 891
Query: 894 PVRPT-QHNCKLCHQKLGYATASRSLVYKPAMLSMVAIAAVCVCVALLFKSCPEVLYVFR 952
+RP Q CK C+ K+ Y ASRSL+Y+PAMLSMVAIAAVCVCVALLFKS PEVLYVF
Sbjct: 892 TLRPIQQQQCKRCNHKVAYGNASRSLLYRPAMLSMVAIAAVCVCVALLFKSSPEVLYVFT 951
Query: 953 PFRWEMLDYGTS 964
PFRWE+LDYGTS
Sbjct: 952 PFRWELLDYGTS 963
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356499594|ref|XP_003518623.1| PREDICTED: squamosa promoter-binding-like protein 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1273 bits (3295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 668/1019 (65%), Positives = 787/1019 (77%), Gaps = 64/1019 (6%)
Query: 1 METRFRGEAHHFYGMN-SMDLRAVGKKTLEWDLNDWKWDGDLFIASKLNPAPNENIG--R 57
ME +F EA+HFYG+ S DLR VGK++ EWDLNDW+WDGDLFIAS+LNP P + +G +
Sbjct: 1 MEAKFGAEAYHFYGVGASSDLRGVGKRSSEWDLNDWRWDGDLFIASRLNPVPADGVGVGQ 60
Query: 58 QFFPLA----VGNSSNSSSSCSDEVNLGIENGKREVEKKRRAVVVEDHNSYEVAAGGLSL 113
QFFP+ V ++SSS S+EV+ +E +KKRR +V+ED E G LSL
Sbjct: 61 QFFPIGSGIPVAGGPSNSSSTSEEVDPRDPKANKEGDKKRRVIVLEDDGLNE-EGGTLSL 119
Query: 114 KLGGNGHPLSEREMGNWAGSSGKKTKFGGGSSSRAVCQVEDCGADLSNAKDYHRRHKVCE 173
KLGG+ + +RE+G+W G++GKK++ G +S+RAVCQVEDC ADLS AKDYHRRHKVCE
Sbjct: 120 KLGGHASAVVDREVGSWDGTNGKKSRVSGSTSNRAVCQVEDCSADLSKAKDYHRRHKVCE 179
Query: 174 MHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPDAVANGS 233
MHSKASRALVGN MQRFCQQCSRFH+LQEFDEGKRSCRRRLAGHNKRRRKTN +AV NGS
Sbjct: 180 MHSKASRALVGNAMQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNKRRRKTNHEAVPNGS 239
Query: 234 SPNNDQTSGYLLISLLRILSNMHSSRSDQRTDQDLLSHLLRGLASPAGENGGRGISGLLQ 293
S N+DQTS YLLISLL+ILSNMHS RSDQ TDQDLL+H+LR LAS GE GG+ I+ LL+
Sbjct: 240 SLNDDQTSSYLLISLLKILSNMHSDRSDQTTDQDLLTHILRSLASQNGEQGGKNIANLLR 299
Query: 294 EHQDMLNERTSAGNSEVVQAFLANG-QGCPTPFRQQLNATVSEMPQQVSLPHDARGAEDQ 352
E +++L E S+ SE++ +NG QG P+ RQ ++++M QQV HDA GA DQ
Sbjct: 300 EPENLLREDGSSRKSEMMSTLFSNGSQGSPSNIRQHETVSMAKMQQQVMHAHDA-GASDQ 358
Query: 353 D---------------------------------------------EDVERSPVPANLGT 367
ED+ER PV NL T
Sbjct: 359 QITSSIKPSMSNSPPAYSEARDSTAGQIKMNNFDLNDIYIDSDDGMEDLERLPVSTNLVT 418
Query: 368 SSIDCPSWVRQDSQQSSPPQTSGNSDSASAQSPSSSS-DAQSRTDRIVFKLFGKEPNDFP 426
SS+D P W +QDS QSSPPQTSGNSDSASAQSPSSSS +AQSRTDRIVFKLFGKEPNDFP
Sbjct: 419 SSLDYP-WAQQDSHQSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNDFP 477
Query: 427 LVLRAQILDWLSHSPSDMESYIRPGCVILTIYLRQAEAAWEELCCDLTFSLSRLLDLSND 486
LVLRAQILDWLSHSP+DMESYIRPGC++LTIYLRQAEA WEELC DLT SL+RLLD+S+D
Sbjct: 478 LVLRAQILDWLSHSPTDMESYIRPGCIVLTIYLRQAEALWEELCYDLTSSLNRLLDVSDD 537
Query: 487 SFWTSGWVYARVQHQIAFIYNGQVVLDTSLPPRSNNYSKILSVKPIAVPASERAQFFVKG 546
+FW +GWV+ RVQHQ+AFI+NGQVV+DTSLP RSNNYSKIL+V PIAVPAS+RAQF VKG
Sbjct: 538 TFWRNGWVHIRVQHQMAFIFNGQVVIDTSLPFRSNNYSKILTVSPIAVPASKRAQFSVKG 597
Query: 547 INLGRSATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQCVNFSCSIPAVTGRGFIEI 606
+NL R ATRL+CA+EGKY+V E H +D KE DELQCV FSCS+P + GRGFIEI
Sbjct: 598 VNLIRPATRLMCALEGKYLVCEDDHMSMDQCS--KEPDELQCVQFSCSVPVMNGRGFIEI 655
Query: 607 EDHGFSSTFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQAMDFIHEIGW 666
ED G SS+FFPFIV EEDVCSEI LE LE + TD D+E GKI KNQAMDFIHE+GW
Sbjct: 656 EDQGLSSSFFPFIVVEEDVCSEICTLEPLLELSETDPDIEGTGKIKAKNQAMDFIHEMGW 715
Query: 667 LFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHP 726
L HRSQ K R+ + DLFPL+RFKWLIEFSMDH+WCA V+KLL++L DGTV+ G+HP
Sbjct: 716 LLHRSQLKLRMV---SSVDLFPLKRFKWLIEFSMDHDWCAAVRKLLNLLFDGTVNTGDHP 772
Query: 727 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDV 786
SL LAL+E+GLLH+AVR+NS+ LV+LLLR+VP +SD+LG E KALVDG ++ FLFRPDV
Sbjct: 773 SLYLALSEMGLLHKAVRRNSKHLVELLLRYVPENISDKLGPEEKALVDGENQTFLFRPDV 832
Query: 787 IGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSY 846
G AGLTP+HIAAGKDGSEDVLDALT+DP MVGIEAWKNARDS+GSTPEDYARLRGHY+Y
Sbjct: 833 DGTAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKNARDSTGSTPEDYARLRGHYAY 892
Query: 847 IHLVQKKINKRPNGGHVVVDICGVVPDSNIYQKQNNESTASFEIGQTPVRPTQHNCKLCH 906
IHLVQKKINK+ HVVV+I + ++N +KQN ST FEIG+ VR Q +CKLC
Sbjct: 893 IHLVQKKINKKQGAAHVVVEIPSNMTENNTNKKQNELSTI-FEIGKPEVRRGQGHCKLCD 951
Query: 907 QKLGYATA-SRSLVYKPAMLSMVAIAAVCVCVALLFKSCPEVLYVFRPFRWEMLDYGTS 964
++ TA RS+VY+PAMLSMVAIAAVCVCVALLFKS PEV+ +FRPFRWE LD+GTS
Sbjct: 952 NRISCRTAVGRSMVYRPAMLSMVAIAAVCVCVALLFKSSPEVICMFRPFRWENLDFGTS 1010
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449461697|ref|XP_004148578.1| PREDICTED: squamosa promoter-binding-like protein 12-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1251 bits (3238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 660/1015 (65%), Positives = 784/1015 (77%), Gaps = 53/1015 (5%)
Query: 1 METRFRGEAHHFYGMNSMDLRA-VGKKTLEWDLNDWKWDGDLFIASKLNPAPNENIGRQF 59
ME + GEA YGM +MDLRA VGK+ LEWDLNDWKWDGDLFIA LN + ++ RQ
Sbjct: 1 MEAGYGGEACQLYGMGTMDLRAAVGKRNLEWDLNDWKWDGDLFIARPLNTVESGHLSRQL 60
Query: 60 FPLAVG------NSSNSSSSCSDEVNLGIENGKREVEKKRRAVVVEDHNSYEVAAGGLSL 113
FP+ G SSNSSSSCSDE N+GIE GKREVEK+RR V+ED N + A LSL
Sbjct: 61 FPIVSGIPLTNGGSSNSSSSCSDEANMGIEKGKREVEKRRRVTVIEDENLND-EARTLSL 119
Query: 114 KLGGNGHPLSEREMGNWAGSSGKKTKFGGGSSSRAVCQVEDCGADLSNAKDYHRRHKVCE 173
K+GGNG + ER+ G+W G+SGKKTK GG+S+RAVCQVEDCGADLSNAKDYHRRHKVCE
Sbjct: 120 KVGGNGSQIVERDAGSWEGTSGKKTKLAGGNSNRAVCQVEDCGADLSNAKDYHRRHKVCE 179
Query: 174 MHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPDAVANGS 233
HSKAS ALV NVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRK NPD V NG+
Sbjct: 180 THSKASNALVANVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKINPDNVVNGN 239
Query: 234 SPNNDQTSGYLLISLLRILSNMHSSRSDQRTDQDLLSHLLRGLASPAGENGGRGISGLLQ 293
SP ++QTS YLL++LLRIL+N+HS+ S+Q TDQDLLSHL+R LA + E+GG+ +SG+L
Sbjct: 240 SPPDEQTSSYLLLTLLRILANLHSNGSNQTTDQDLLSHLIRSLACQSSEHGGKNLSGILH 299
Query: 294 EHQDMLNERTSAGNSEVVQAFLANGQGCPTPFRQQLNATVSEMPQQV------------- 340
E Q++LN G S++V FL+NG P +Q + + E P Q
Sbjct: 300 EPQNLLNNGALIGKSDLVSTFLSNGPQVPLRSSKQHDTPIPETPAQAIGRGGDTPAISSI 359
Query: 341 ------SLP--------------------HDAR-GAEDQDEDVERSPVPANLGTSSIDCP 373
S P +DA ++D ED+ER +P ++GTSS++CP
Sbjct: 360 KPSTSNSPPAYSEIRDSTVGQCKMMNFDLNDAYVDSDDGMEDIERQTLPVHMGTSSLECP 419
Query: 374 SWVRQDSQQSSPPQTSGNSDSASAQSPSSSS-DAQSRTDRIVFKLFGKEPNDFPLVLRAQ 432
SWV+QDS QSSPPQTSGNSDSASAQSPSSS+ +AQSRTDRI+ KLFGK PNDFP VLRAQ
Sbjct: 420 SWVQQDSHQSSPPQTSGNSDSASAQSPSSSTGEAQSRTDRIILKLFGKAPNDFPHVLRAQ 479
Query: 433 ILDWLSHSPSDMESYIRPGCVILTIYLRQAEAAWEELCCDLTFSLSRLLDLSNDSFWTSG 492
+LDWLSHSP+++ESYIRPGCV+LT+Y+RQ EAAW+ LC DL+ S +RLLD+S+D+FW +G
Sbjct: 480 VLDWLSHSPTEIESYIRPGCVVLTVYVRQTEAAWDNLCHDLSTSFNRLLDVSDDAFWKTG 539
Query: 493 WVYARVQHQIAFIYNGQVVLDTSLPPRSNNYSKILSVKPIAVPASERAQFFVKGINLGRS 552
WVY RVQHQIAF+Y GQVV+DTSLP R+NNY +I SV P+AV S++A F VKGINL +
Sbjct: 540 WVYVRVQHQIAFVYQGQVVVDTSLPLRNNNYCRITSVNPVAVSTSKKAIFSVKGINLSQP 599
Query: 553 ATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQCVNFSCSIPAVTGRGFIEIEDHGFS 612
TRLLCA+EGKY+ QEA+ E + D K D+ QCV FSCSIP V GRGFIE+ED GFS
Sbjct: 600 TTRLLCAIEGKYLSQEASDESTESDDNLKAQDDSQCVTFSCSIPVVYGRGFIEVEDDGFS 659
Query: 613 STFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQAMDFIHEIGWLFHRSQ 672
S+ FPFIVAEEDVCSEI L+SALE T ++ +++ ++ AM+FIHEIGWLFHR+Q
Sbjct: 660 SSSFPFIVAEEDVCSEICSLQSALELTETCSNSGETAELEGRSNAMEFIHEIGWLFHRNQ 719
Query: 673 SKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLAL 732
KSRLGHLDPN +LF L RFKWL+EFSMDH+WCAVVKKLL IL DGTV G HPSL+LAL
Sbjct: 720 LKSRLGHLDPNENLFSLPRFKWLMEFSMDHDWCAVVKKLLDILRDGTVDAGGHPSLNLAL 779
Query: 733 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGL 792
E+GLLHRAVRKNSR LV+LLLR+ P +V D SE+ A VDG FLF+P+V+GPAGL
Sbjct: 780 MEMGLLHRAVRKNSRSLVELLLRY-PSKVKDASSSEDSASVDGETDSFLFKPNVVGPAGL 838
Query: 793 TPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852
TP+HIAAGKD SEDVLDALT+DPGMVGIEAWK+ARDS+GSTPEDYARLRGHYSYI LVQ+
Sbjct: 839 TPLHIAAGKDDSEDVLDALTNDPGMVGIEAWKSARDSTGSTPEDYARLRGHYSYIRLVQR 898
Query: 853 KINKRPNGGHVVVDICGVVPDSNIYQKQNNESTAS-FEIGQTPVRPTQHNCKLCHQK-LG 910
KINKR GHVV+DI + D + QKQN + T+S FEIG+T ++P+Q +CKLC +K LG
Sbjct: 899 KINKRSAAGHVVLDIPSSLSDGSWNQKQNTDFTSSRFEIGRTELKPSQQHCKLCVRKPLG 958
Query: 911 YATASR-SLVYKPAMLSMVAIAAVCVCVALLFKSCPEVLYVFRPFRWEMLDYGTS 964
T+S SLVY+PAMLSMVAIAAVCVCVALLFKS PEVLYVFRPFRWE+LDYGTS
Sbjct: 959 CGTSSSASLVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYVFRPFRWELLDYGTS 1013
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449518123|ref|XP_004166093.1| PREDICTED: LOW QUALITY PROTEIN: squamosa promoter-binding-like protein 12-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1249 bits (3233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 658/1015 (64%), Positives = 782/1015 (77%), Gaps = 52/1015 (5%)
Query: 1 METRFRGEAHHFYGMNSMDLRA-VGKKTLEWDLNDWKWDGDLFIASKLNPAPNENIGRQF 59
ME + GEA YGM +MDLRA VGK+ LEWDLNDWKWDGDLFIA LN + ++ RQ
Sbjct: 1 MEAGYGGEACQLYGMGTMDLRAAVGKRNLEWDLNDWKWDGDLFIARPLNTVESGHLSRQL 60
Query: 60 FPLAVG------NSSNSSSSCSDEVNLGIENGKREVEKKRRAVVVEDHNSYEVAAGGLSL 113
FP+ G SSNSSSSCSDE N+GIE GKREVEK+RR V+ED N + A LSL
Sbjct: 61 FPIVSGIPLTNGGSSNSSSSCSDEANMGIEKGKREVEKRRRVTVIEDENLND-EARTLSL 119
Query: 114 KLGGNGHPLSEREMGNWAGSSGKKTKFGGGSSSRAVCQVEDCGADLSNAKDYHRRHKVCE 173
K+GGNG + ER+ G+W G+SGKKTK GG+S+RAVCQVEDCGADLSNAKDYHRRHKVCE
Sbjct: 120 KVGGNGSQIVERDAGSWEGTSGKKTKLAGGNSNRAVCQVEDCGADLSNAKDYHRRHKVCE 179
Query: 174 MHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPDAVANGS 233
HSKAS ALV NVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRK NPD V NG+
Sbjct: 180 THSKASNALVANVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKINPDNVVNGN 239
Query: 234 SPNNDQTSGYLLISLLRILSNMHSSRSDQRTDQDLLSHLLRGLASPAGENGGRGISGLLQ 293
SP ++QTS YLL++LLRIL+N+HS+ S+Q TDQDLLSHL+R LA + E+G + +SG+L
Sbjct: 240 SPPDEQTSSYLLLTLLRILANLHSNGSNQTTDQDLLSHLIRSLACQSSEHGXKNLSGILH 299
Query: 294 EHQDMLNERTSAGNSEVVQAFLANGQGCPTPFRQQLNATVSEMPQQV------------- 340
E Q++LN G S++V FL+NG P +Q + + E P Q
Sbjct: 300 EPQNLLNNGALIGKSDLVSTFLSNGPQVPLRSSKQHDTPIPETPAQAIGRGGDTPAISSI 359
Query: 341 ------SLP--------------------HDAR-GAEDQDEDVERSPVPANLGTSSIDCP 373
S P +DA ++D ED+ER +P ++GTSS++CP
Sbjct: 360 KPSTSNSPPAYSEIRDSTVGQCKMMNFDLNDAYVDSDDGMEDIERQTLPVHMGTSSLECP 419
Query: 374 SWVRQDSQQSSPPQTSGNSDSASAQSPSSSS-DAQSRTDRIVFKLFGKEPNDFPLVLRAQ 432
SWV+QDS QSSPPQTSGNSDSASAQSPSSS+ +AQSRTDRI+ KLFGK PNDFP VLRAQ
Sbjct: 420 SWVQQDSHQSSPPQTSGNSDSASAQSPSSSTGEAQSRTDRIILKLFGKAPNDFPHVLRAQ 479
Query: 433 ILDWLSHSPSDMESYIRPGCVILTIYLRQAEAAWEELCCDLTFSLSRLLDLSNDSFWTSG 492
+LDWLSHSP+++ESYIRPGCV+LT+Y+RQ EAAW+ LC DL+ S +RLLD+S+D+FW +G
Sbjct: 480 VLDWLSHSPTEIESYIRPGCVVLTVYVRQTEAAWDNLCHDLSTSFNRLLDVSDDAFWKTG 539
Query: 493 WVYARVQHQIAFIYNGQVVLDTSLPPRSNNYSKILSVKPIAVPASERAQFFVKGINLGRS 552
WVY RVQHQIAF+Y GQVV+DTSLP R+NNY +I SV P+AV S++A F VKGINL +
Sbjct: 540 WVYVRVQHQIAFVYQGQVVVDTSLPLRNNNYCRITSVNPVAVSTSKKAIFSVKGINLSQP 599
Query: 553 ATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQCVNFSCSIPAVTGRGFIEIEDHGFS 612
TRLLCA+EGKY+ QEA+ E + D K D+ QCV FSCSIP V GRGFIE+ED GFS
Sbjct: 600 TTRLLCAIEGKYLSQEASDESTESDDNLKAQDDSQCVTFSCSIPVVYGRGFIEVEDDGFS 659
Query: 613 STFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQAMDFIHEIGWLFHRSQ 672
S+ FPFIVAEEDVCSEI L+SALE T ++ +++ ++ AM+FIHEIGWLFHR+Q
Sbjct: 660 SSSFPFIVAEEDVCSEICSLQSALELTETCSNSGETAELEGRSNAMEFIHEIGWLFHRNQ 719
Query: 673 SKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLAL 732
KSRLGHLDPN +LF L RFKWL+EFSMDH+WCAVVKKLL IL DGTV G HPSL+LAL
Sbjct: 720 LKSRLGHLDPNENLFSLPRFKWLMEFSMDHDWCAVVKKLLDILRDGTVDAGGHPSLNLAL 779
Query: 733 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGL 792
E+GLLHRAVRKNSR LV+LLLR+ +V D SE+ A VDG FLF+P+V+GPAGL
Sbjct: 780 MEMGLLHRAVRKNSRSLVELLLRYPXQKVKDASSSEDSASVDGETDSFLFKPNVVGPAGL 839
Query: 793 TPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852
TP+HIAAGKD SEDVLDALT+DPGMVGIEAWK+ARDS+GSTPEDYARLRGHYSYI LVQ+
Sbjct: 840 TPLHIAAGKDDSEDVLDALTNDPGMVGIEAWKSARDSTGSTPEDYARLRGHYSYIRLVQR 899
Query: 853 KINKRPNGGHVVVDICGVVPDSNIYQKQNNESTAS-FEIGQTPVRPTQHNCKLCHQK-LG 910
KINKR GHVV+DI + D + QKQN + T+S FEIG+T ++P+Q +CKLC +K LG
Sbjct: 900 KINKRSAAGHVVLDIPSSLSDGSWNQKQNTDFTSSRFEIGRTELKPSQQHCKLCVRKPLG 959
Query: 911 YATASR-SLVYKPAMLSMVAIAAVCVCVALLFKSCPEVLYVFRPFRWEMLDYGTS 964
T+S SLVY+PAMLSMVAIAAVCVCVALLFKS PEVLYVFRPFRWE+LDYGTS
Sbjct: 960 CGTSSSASLVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYVFRPFRWELLDYGTS 1014
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357442095|ref|XP_003591325.1| SQUAMOSA promoter binding protein [Medicago truncatula] gi|355480373|gb|AES61576.1| SQUAMOSA promoter binding protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1228 bits (3177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 659/1018 (64%), Positives = 777/1018 (76%), Gaps = 69/1018 (6%)
Query: 1 METRFRGEAHHFYGMN-SMDLRAVGKKTLEWDLNDWKWDGDLFIASKLNPAPNEN--IGR 57
M R E +HFYG+ S DL +GK++ EW+LNDW+WDGDLFIAS++N E+ +G+
Sbjct: 1 MGERLGAENYHFYGVGGSSDLSGMGKRSREWNLNDWRWDGDLFIASRVNQVQAESLRVGQ 60
Query: 58 QFFPLA-----VGNSSNSSSSCSDEVNLGIENGKREVEKKRRAVVVEDHNSYEVAAGGLS 112
QFFPL VG SSN+SSSCS+E +L E G +E EKKRR +V+ED + AG LS
Sbjct: 61 QFFPLGSGIPVVGGSSNTSSSCSEEGDL--EKGNKEGEKKRRVIVLED-DGLNDKAGALS 117
Query: 113 LKLGGNGHPLSEREMGNWAGSSGKKTKFGGGSSSRAVCQVEDCGADLSNAKDYHRRHKVC 172
L L G+ P+ ER+ GKK++ GG+S+RAVCQVEDCGADLS KDYHRRHKVC
Sbjct: 118 LNLAGHVSPVVERD--------GKKSRGAGGTSNRAVCQVEDCGADLSRGKDYHRRHKVC 169
Query: 173 EMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPDAVANG 232
EMHSKASRALVGN MQRFCQQCSRFH+L+EFDEGKRSCRRRLAGHNKRRRKTN +AV NG
Sbjct: 170 EMHSKASRALVGNAMQRFCQQCSRFHILEEFDEGKRSCRRRLAGHNKRRRKTNQEAVPNG 229
Query: 233 SSPNNDQTSGYLLISLLRILSNMHSSRSDQRTDQDLLSHLLRGLASPAGENGGRGISGLL 292
S N+DQTS YLLISLL+ILSNMHS RSDQ TDQDLL+HLLR LAS E G + +S LL
Sbjct: 230 SPTNDDQTSSYLLISLLKILSNMHSDRSDQPTDQDLLTHLLRSLASQNDEQGSKNLSNLL 289
Query: 293 QEHQDMLNERTSAGNSEVVQAFLANG-QGCPTPFRQQLNATVSEMPQQVSLPHDARGAED 351
+E +++L E S+ NS +V A +NG QG PT Q ++++M Q++ HD R ++
Sbjct: 290 REQENLLREGGSSRNSGMVSALFSNGSQGSPTVITQHQPVSMNQMQQEMVHTHDVRTSDH 349
Query: 352 Q-------------------------------------------DEDVERSPVPANLGTS 368
Q ED+ER PV NL TS
Sbjct: 350 QLISSIKPSISNSPPAYSETRDSSGQTKMNNFDLNDIYVDSDDGTEDLERLPVSTNLATS 409
Query: 369 SIDCPSWVRQDSQQSSPPQTSGNSDSASAQSPSSSS-DAQSRTDRIVFKLFGKEPNDFPL 427
S+D P W +QDS QSSP QTSGNSDSASAQSPSSSS +AQSRTDRIVFKLFGKEPN+FPL
Sbjct: 410 SVDYP-WTQQDSHQSSPAQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNEFPL 468
Query: 428 VLRAQILDWLSHSPSDMESYIRPGCVILTIYLRQAEAAWEELCCDLTFSLSRLLDLSNDS 487
VLRAQILDWLS SP+D+ESYIRPGC++LTIYLRQAEA WEELCCDLT SL +LLD+S+D+
Sbjct: 469 VLRAQILDWLSQSPTDIESYIRPGCIVLTIYLRQAEAVWEELCCDLTSSLIKLLDVSDDT 528
Query: 488 FWTSGWVYARVQHQIAFIYNGQVVLDTSLPPRSNNYSKILSVKPIAVPASERAQFFVKGI 547
FW +GWV+ RVQHQ+AFI+NGQVV+DTSLP RSNNYSKI +V PIAVPAS+RAQF VKG+
Sbjct: 529 FWKTGWVHIRVQHQMAFIFNGQVVIDTSLPFRSNNYSKIWTVSPIAVPASKRAQFSVKGV 588
Query: 548 NLGRSATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQCVNFSCSIPAVTGRGFIEIE 607
NL R ATRL+CA+EGKY+V E HE D +ELDELQC+ FSCS+P GRGFIEIE
Sbjct: 589 NLMRPATRLMCALEGKYLVCEDAHESTDQYS--EELDELQCIQFSCSVPVSNGRGFIEIE 646
Query: 608 DHGFSSTFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQAMDFIHEIGWL 667
D G SS+FFPFIVAEEDVC+EIR+LE LE + TD D+E GKI K+QAMDFIHE+GWL
Sbjct: 647 DQGLSSSFFPFIVAEEDVCTEIRVLEPLLESSETDPDIEGTGKIKAKSQAMDFIHEMGWL 706
Query: 668 FHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS 727
HRSQ K R+ +L+ DLFPL+RF WL+EFSMDH+WCAVVKKLL++LLD TV+ G+HP+
Sbjct: 707 LHRSQLKYRMVNLNSGVDLFPLQRFTWLMEFSMDHDWCAVVKKLLNLLLDETVNKGDHPT 766
Query: 728 LDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVI 787
L AL+E+GLLHRAVR+NS+ LV+LLLR+VP SD LG E+KALV G + +LFRPD +
Sbjct: 767 LYQALSEMGLLHRAVRRNSKQLVELLLRYVPDNTSDELGPEDKALVGGKNHSYLFRPDAV 826
Query: 788 GPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYI 847
GPAGLTP+HIAAGKDGSEDVLDALT+DP MVGIEAWKNARDS+GSTPEDYARLRGHY+YI
Sbjct: 827 GPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKNARDSTGSTPEDYARLRGHYTYI 886
Query: 848 HLVQKKINKRPNGGHVVVDICGVVPDSNIYQKQNNESTASFEIGQTPVRPTQHNCKLCHQ 907
HLVQKKINK HVVV+I + +SN KQ NES S EIG+ VR +Q NCKLC
Sbjct: 887 HLVQKKINKTQGAAHVVVEIPSNMTESNKNPKQ-NESFTSLEIGKAEVRRSQGNCKLCDT 945
Query: 908 KLGYATA-SRSLVYKPAMLSMVAIAAVCVCVALLFKSCPEVLYVFRPFRWEMLDYGTS 964
K+ TA RS+VY+PAMLSMVAIAAVCVCVALLFKS PEVLY+FRPFRWE LD+GTS
Sbjct: 946 KISCRTAVGRSMVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYMFRPFRWESLDFGTS 1003
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297744051|emb|CBI37021.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1180 bits (3053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 632/967 (65%), Positives = 714/967 (73%), Gaps = 110/967 (11%)
Query: 1 METRFRGEAHHFYGMNSMDLRAVGKKTLEWDLNDWKWDGDLFIASKLNPAPNENIGRQFF 60
ME + GEAHHFYG+ + DLR VGK++ EWD N+WKWDGDLFIAS +NP P++ +QFF
Sbjct: 1 MEAKIGGEAHHFYGIGTSDLRVVGKRSSEWDSNEWKWDGDLFIASPMNPVPSDYTSQQFF 60
Query: 61 PLAVGNSSNSSSSCSDEVNLGIENGKREVEKKRRAVVVEDHNSYEVAAGGLSLKLGGNGH 120
P I KRE+EK+RR +VV+D N G LSLKLGG+GH
Sbjct: 61 PHGSA----------------IPKRKRELEKRRRVIVVQDDND---ETGTLSLKLGGHGH 101
Query: 121 PLSEREMGNWAGSSGKKTKFGGGSSSRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKASR 180
+SERE+GNW G+SGKKTK G SSSRAVCQVEDCGADLS AKDYHRRHKVCEMHSKA
Sbjct: 102 SVSEREVGNWEGTSGKKTKLAGVSSSRAVCQVEDCGADLSKAKDYHRRHKVCEMHSKAGC 161
Query: 181 ALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPDAVANGSSPNNDQT 240
ALVGN MQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKT+PDA NG+S N+DQ
Sbjct: 162 ALVGNDMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDAAGNGNSLNDDQA 221
Query: 241 SGYLLISLLRILSNMHSS-RSDQRTDQDLLSHLLRGLASPAGENGGRGISGLLQEHQDML 299
SGYLLISLLRILSNMHS+ +SDQ DQDLLSHLLR LAS G NG R ISGLLQE Q +L
Sbjct: 222 SGYLLISLLRILSNMHSNDKSDQTKDQDLLSHLLRSLASYGGTNGSRNISGLLQESQ-LL 280
Query: 300 NERTSAGNSEVVQAFLANGQGCPTPFRQQLNATVSEMP-QQVSLPHDARGAEDQDEDVER 358
N+ S GN+EVV A L NG + T ++ L ++D ED+ER
Sbjct: 281 NDGISVGNTEVVSALLPNGVHADEARVGNMQMTSWQIKLNNFDLNDIYIDSDDGMEDLER 340
Query: 359 SPVPANLGTSSIDCPSWVRQDSQQSSPPQTSGNSDSASAQSPSSS-SDAQSRTDRIVFKL 417
SPVP NLGT S++CPSWV+QDS QSSPPQTSGNSDSASAQSPSSS +AQSRTDRIVFKL
Sbjct: 341 SPVPENLGTGSLECPSWVQQDSHQSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKL 400
Query: 418 FGKEPNDFPLVLRAQILDWLSHSPSDMESYIRPGCVILTIYLRQAEAAWEELCCDLTFSL 477
FGKEPNDFPLVLRAQILDWLSHSP+D+ESYIRPGC++LTIYLR E+ WEELCCDL SL
Sbjct: 401 FGKEPNDFPLVLRAQILDWLSHSPTDIESYIRPGCIVLTIYLRLPESTWEELCCDLGSSL 460
Query: 478 SRLLDLSNDSFWTSGWVYARVQHQIAFIYNGQVVLDTSLPPRSNNYSKILSVKPIAVPAS 537
SRLLD+SND+FW +GWVY RVQHQIAFIYNGQVV+D SLP ++NNYSKILS+KPIA+ S
Sbjct: 461 SRLLDVSNDTFWRTGWVYIRVQHQIAFIYNGQVVVDMSLPLKTNNYSKILSIKPIAISMS 520
Query: 538 ERAQFFVKGINLGRSATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQCVNFSCSIPA 597
E AQF VKG NL R ATRLLCA+EGKY+V+EATHEL+DD+D KE DELQ +NFSCSIP
Sbjct: 521 EEAQFLVKGFNLSRPATRLLCALEGKYLVKEATHELMDDIDSVKEHDELQYLNFSCSIPK 580
Query: 598 VTGRGFIEIEDHGFSSTFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA 657
+TGRGFIE+EDHG SS+FFP IVAE+DVCSEI MLES +E D D
Sbjct: 581 MTGRGFIEVEDHGLSSSFFPIIVAEKDVCSEICMLESTIEMTDIDED------------- 627
Query: 658 MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLD 717
G+ LF +RFKWL+EFSMD +WCAVVKKLL I+LD
Sbjct: 628 -------GY-------------------LFSFKRFKWLMEFSMDRDWCAVVKKLLDIMLD 661
Query: 718 GTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVH 777
GTV GE+PSL LA E+GLLHRAVR+NSRPLV+LLLR+VP G
Sbjct: 662 GTVGAGEYPSLKLAFMEMGLLHRAVRRNSRPLVELLLRYVPER--------------GGR 707
Query: 778 KGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDY 837
FL RPDV+GPAGLTP+HIAAG+DGSEDVLDALTDDPGMVG+EAWK+ARDS+G TPEDY
Sbjct: 708 ASFLLRPDVVGPAGLTPLHIAAGRDGSEDVLDALTDDPGMVGVEAWKSARDSTGFTPEDY 767
Query: 838 ARLRGHYSYIHLVQKKINKRPNGGHVVVDICGVVPDSNIYQKQNNESTASFEIGQTPVRP 897
ARLRGHYSYIHLVQKKIN+R GHVVVD
Sbjct: 768 ARLRGHYSYIHLVQKKINRRLGNGHVVVD------------------------------- 796
Query: 898 TQHNCKLCHQKLGYATASRSLVYKPAMLSMVAIAAVCVCVALLFKSCPEVLYVFRPFRWE 957
CK C+ K+ Y ASRSL+Y+PAMLSMVAIAAVCVCVALLFKS PEVLYVF PFRWE
Sbjct: 797 ---QCKRCNHKVAYGNASRSLLYRPAMLSMVAIAAVCVCVALLFKSSPEVLYVFTPFRWE 853
Query: 958 MLDYGTS 964
+LDYGTS
Sbjct: 854 LLDYGTS 860
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357511495|ref|XP_003626036.1| SQUAMOSA promoter binding protein [Medicago truncatula] gi|355501051|gb|AES82254.1| SQUAMOSA promoter binding protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1180 bits (3053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/1026 (61%), Positives = 742/1026 (72%), Gaps = 102/1026 (9%)
Query: 8 EAHHFYGMN--SMDLRAVGKKTLEWDLNDWKWDGDLFIA-SKLNPAPNENIGRQFFPLAV 64
EA YG S DLRA+GK + EWDLN+WKWD LFIA SKL P P RQF P+ V
Sbjct: 2 EAFQLYGNGGGSSDLRAMGKNSKEWDLNNWKWDSHLFIATSKLTPVPEH---RQFLPIPV 58
Query: 65 GNSSNSSSS-------CSDEVNLGIENGKREVEKKRRAVVVEDHNSYEV--AAGGLSLKL 115
G S CS++++LGI K E E+KRR +VVED + G LSL L
Sbjct: 59 GGGGGGGGSNSNSSSSCSEQLDLGICQVK-EGERKRRVIVVEDELGLGLNKEGGNLSLNL 117
Query: 116 GGNGHPLSEREMGNWAGSSGKKTKF-GGGSSSRAVCQVEDCGADLSNAKDYHRRHKVCEM 174
GG + W G++GKK++ GGGSSSRA CQVEDC ADL+NAKDYHRRHKVCE+
Sbjct: 118 GGG--------VATWEGNNGKKSRVAGGGSSSRAFCQVEDCRADLNNAKDYHRRHKVCEI 169
Query: 175 HSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPDAVANGSS 234
HSKAS+ALVGN MQRFCQQCSRFH+LQEFDEGKRSCRRRLAGHNKRRRKTN DAV NGSS
Sbjct: 170 HSKASKALVGNAMQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNKRRRKTNQDAVPNGSS 229
Query: 235 PNNDQTSGYLLISLLRILSNMHSSRSDQRTDQDLLSHLLRGLASPAGENGGRGISGLLQE 294
PN+DQT+ RS+Q DQDLL+HLLR LA+ GE GGR +S LL+E
Sbjct: 230 PNDDQTT----------------DRSNQTADQDLLTHLLRSLANQNGEQGGRNLSNLLRE 273
Query: 295 HQDMLNERTSAGNSEVVQAFLANG-QGCPTPFRQQLNATVSEMPQQVSLPHDARGAEDQD 353
+++L E + +G SE+V + NG QG PT Q ++SE+ QV HDAR A+ Q
Sbjct: 274 PENLLKEGSLSGKSEMVSTLVTNGSQGSPTVTVQNQTVSISEIQHQVMHSHDARVADQQT 333
Query: 354 --------------------------------------------EDVERSPVPANLGTSS 369
ED+ER PV NLG SS
Sbjct: 334 TFSAKPGVSNSPPAYSEARDSTAGQTKMNDFDLNDIYIDSDDGIEDIERLPVTTNLGASS 393
Query: 370 IDCPSWVRQDSQQSSPPQTSGNSDSASAQSPSSSS-DAQSRTDRIVFKLFGKEPNDFPLV 428
+D P W++QDS QSSPPQTSGNSDSASAQSPSSS+ + Q+RTDRIVFKLFGK P DFPLV
Sbjct: 394 LDYP-WMQQDSHQSSPPQTSGNSDSASAQSPSSSTGETQNRTDRIVFKLFGKGPGDFPLV 452
Query: 429 LRAQILDWLSHSPSDMESYIRPGCVILTIYLRQAEAAWEELCCDLTFSLSRLLDLSNDSF 488
L+AQILDWLSHSP+D+E YIRPGCV+LTIYLRQAE WEELC DLT SL+RLL +S+D F
Sbjct: 453 LKAQILDWLSHSPTDIEGYIRPGCVVLTIYLRQAEVVWEELCFDLTSSLNRLLGVSDDDF 512
Query: 489 WTSGWVYARVQHQIAFIYNG---------QVVLDTSLPPRSNNYSKILSVKPIAVPASER 539
W +GWV+ RVQHQ+AFI+NG Q+V+DT LP RSNNY KILSV PIA+P+S+
Sbjct: 513 WRTGWVHIRVQHQMAFIFNGSNCTFSAAGQIVIDTPLPFRSNNYGKILSVSPIAIPSSKT 572
Query: 540 AQFFVKGINLGRSATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQCVNFSCSIPAVT 599
AQF VKGINL R ATRLLCA+EG Y+ E T E +D K+LDELQC+ FSCS+PA+
Sbjct: 573 AQFSVKGINLTRPATRLLCALEGNYLDCEDTDEPMDQCS--KDLDELQCIQFSCSVPAMN 630
Query: 600 GRGFIEIEDHGFSSTFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQAMD 659
GRGFIEIED G SS+FFPFIV EEDVCSEI +LE LE + T D E GKI KNQAMD
Sbjct: 631 GRGFIEIEDQGLSSSFFPFIVVEEDVCSEICVLEPLLESSDTYPDNEGAGKIQAKNQAMD 690
Query: 660 FIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGT 719
FIHE+GWL HR Q KS + L+ + DLFPL RFKWL+EFS+DH+WCAVVKKLL+++LDGT
Sbjct: 691 FIHEMGWLLHRRQIKSSV-RLNSSMDLFPLDRFKWLMEFSVDHDWCAVVKKLLNLMLDGT 749
Query: 720 VSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKG 779
VS G+H SL LAL+ELGLLHRAVR+NSR LV+LLLRFVP +SD+LG E+KALV+G ++
Sbjct: 750 VSTGDHTSLYLALSELGLLHRAVRRNSRQLVELLLRFVPQNISDKLGPEDKALVNGENQN 809
Query: 780 FLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYAR 839
FLFRPD +GPAGLTP+HIAAGKDGSEDVLDALT+DP MVGIEAW +ARDS+GSTPEDYAR
Sbjct: 810 FLFRPDAVGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWNSARDSTGSTPEDYAR 869
Query: 840 LRGHYSYIHLVQKKINKRPNGGHVVVDICGVVPDSNIYQKQNNESTASFEIGQTPVRPTQ 899
LRGHY+YIHLVQKKINK G HVVVDI + + QK+ +ES +F+IG V+ +
Sbjct: 870 LRGHYTYIHLVQKKINKSQGGAHVVVDIPSIPTKFDTSQKK-DESCTTFQIGNAEVKKVR 928
Query: 900 HNCKLCHQKLGYATASR-SLVYKPAMLSMVAIAAVCVCVALLFKSCPEVLYVFRPFRWEM 958
+CKLC KL TA R S VY+PAMLSMVAIAAVCVCVALLFKS PEVLY+FRPFRWE
Sbjct: 929 KDCKLCDHKLSCRTAVRKSFVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYIFRPFRWES 988
Query: 959 LDYGTS 964
LDYGTS
Sbjct: 989 LDYGTS 994
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432161|ref|XP_002274934.1| PREDICTED: squamosa promoter-binding-like protein 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1128 bits (2917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/1042 (57%), Positives = 731/1042 (70%), Gaps = 91/1042 (8%)
Query: 1 METRFRGEAHHFYGMNSMDLRAVGKKTLEWDLNDWKWDGDLFIASKLNPAPNENIGRQFF 60
ME +F G+A+H G DL+ +GK+TLEWDLN WKWDGDLF A++LN P++ +QFF
Sbjct: 1 MEHKFGGKANHLRGPTVSDLKKLGKRTLEWDLNGWKWDGDLFRATQLNSVPSDCGSKQFF 60
Query: 61 PLA---VGNSSNSSSSCSDEVNLGIENGKREVEKKRRAVVVEDHNSYEVAAGGLSLKLGG 117
P A V + SSS SDE+ + GKRE+EKKRR VV+ED E+ G L+LKLG
Sbjct: 61 PPASEPVTVGLSISSSSSDEIIVDDGKGKRELEKKRRVVVLEDEACDEL--GSLNLKLGA 118
Query: 118 NGHPLSEREMGNWAGSSGKKTKFGGGSSSRAVCQVEDCGADLSNAKDYHRRHKVCEMHSK 177
+P+ E E+ SGKKTK G + +RAVCQVEDC ADL NAKDYHRRHKVC+MHSK
Sbjct: 119 QVYPIMEGEV-----KSGKKTKLIGATPNRAVCQVEDCRADLGNAKDYHRRHKVCDMHSK 173
Query: 178 ASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPDAVANGSSPNN 237
AS+ALVGNVMQRFCQQCSRFH+LQEFDEGKRSCRRRLAGHN+RRRKT+PD V NG S N+
Sbjct: 174 ASKALVGNVMQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNRRRRKTHPDTVVNGGSLND 233
Query: 238 DQTSGYLLISLLRILSNMHSSRSDQRTDQDLLSHLLRGLASPAGENGGRGISGLLQEHQD 297
++ YLL+S+LRILSNMH++ SDQ DQDLLSH+L+ LAS G R I GLLQ QD
Sbjct: 234 ERGIRYLLMSVLRILSNMHANSSDQTKDQDLLSHILKNLASSGGTINERDIPGLLQGSQD 293
Query: 298 MLNERTSAGNSEVVQAFLANG-------------------QGCPTPFRQQLNATVSEMPQ 338
+LN TS G +E V ++NG Q P L ATV EM +
Sbjct: 294 LLNAGTSVGTAEKVPDMVSNGLVPNKLLGSASRMADGSDLQASSRPIGPCLMATVPEMAE 353
Query: 339 QVSLPHDAR------------------------------------------------GAE 350
+ DA+ ++
Sbjct: 354 KRVFTDDAQVGMLQNLSGTQPTNRFPTGDGVPAMENMQGTTHGRIKLNNFDLNNVYNDSQ 413
Query: 351 DQDEDVERSPVPANLGTSSIDCPSWVRQDSQQSSPPQTSGNSDSASAQSPSSSS-DAQSR 409
D E+ ERS PAN GT +D V+QDS +SSPPQTS NSDS SA+S S+SS +AQSR
Sbjct: 414 DCIENPERSYGPANPGTRPLDRALLVQQDSYKSSPPQTSANSDSTSARSLSTSSGEAQSR 473
Query: 410 TDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPSDMESYIRPGCVILTIYLRQAEAAWEEL 469
TDRIVFKLFGK+P+DFPLV+R Q+LDWLSH+P+++ES+IRPGC+ILTIYLR ++ WEEL
Sbjct: 474 TDRIVFKLFGKDPSDFPLVMRKQVLDWLSHTPTEIESFIRPGCIILTIYLRLGKSTWEEL 533
Query: 470 CCDLTFSLSRLLDLSNDSFWTSGWVYARVQHQIAFIYNGQVVLDTSLPPRSNNYSKILSV 529
CCDL SLSRLLD+S DSFW +GWVY RVQ+++AFIY+GQVVLDT LP +S+N +I S+
Sbjct: 534 CCDLGSSLSRLLDMSEDSFWRTGWVYTRVQNRLAFIYSGQVVLDTPLPFKSHN-CRISSI 592
Query: 530 KPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQCV 589
KPIAVP SE+AQF VKG NL SATRLLCA+EG+Y+VQE +EL + D F E D+LQC+
Sbjct: 593 KPIAVPVSEQAQFVVKGFNLAGSATRLLCALEGRYLVQETCYELTEGTDTFIEHDDLQCL 652
Query: 590 NFSCSIPAVTGRGFIEIEDHGFSSTFFPFIVAEEDVCSEIRMLESALEFNRTDADVER-F 648
+F CS+P ++GRGFIE+EDHG +S+FFPFIVAE+DVCSEI MLE ++ T D+ R
Sbjct: 653 SFPCSVPNISGRGFIEVEDHGLNSSFFPFIVAEQDVCSEICMLEGVIDMVETAEDILRET 712
Query: 649 GKIDTKNQAMDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVV 708
GK+ K QA+DFIHE+GWL HR+ K RLG +DPN DLFP +RFK L+EFS+DH+WCAVV
Sbjct: 713 GKMQAKYQALDFIHEMGWLLHRNYLKFRLGDMDPNLDLFPFKRFKCLMEFSVDHDWCAVV 772
Query: 709 KKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSE 768
KKLL I+ GTV+ GEHPS+++AL ++ LLH AVR+N RP+V+LLLRF+P ++ D+ GS
Sbjct: 773 KKLLGIVFSGTVNAGEHPSIEIALLDMCLLHSAVRRNCRPMVELLLRFIPDKILDKSGSN 832
Query: 769 NKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARD 828
+K + +LF+PD +GPAGLTP+HIAA DGSE+VLDALTDDP +VGIEAWK+ARD
Sbjct: 833 DKRWPNS-GSNYLFKPDFVGPAGLTPLHIAASMDGSENVLDALTDDPELVGIEAWKSARD 891
Query: 829 SSGSTPEDYARLRGHYSYIHLVQKKINKRPNGGHVVVDICGVVPDSNIYQKQNNE----S 884
GSTP DYA LRGH SYI LVQKKIN + N VV+DI D N K ++
Sbjct: 892 KVGSTPNDYACLRGHNSYIQLVQKKINNKLN-RRVVLDIPDAPLDCNTKPKPSDGLKSVR 950
Query: 885 TASFEIGQTPVRPTQHNCKLCHQKLGYATA--SRSLVYKPAMLSMVAIAAVCVCVALLFK 942
S +I + R QH CKLC QKL Y SL Y+PAMLSMVAIAAVCVCVALLFK
Sbjct: 951 VPSLQIEKQAAR--QH-CKLCEQKLAYGDTRMRTSLAYRPAMLSMVAIAAVCVCVALLFK 1007
Query: 943 SCPEVLYVFRPFRWEMLDYGTS 964
S PEVLYVFRPFRWE+L YG+S
Sbjct: 1008 SSPEVLYVFRPFRWELLKYGSS 1029
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 964 | ||||||
| TAIR|locus:2041329 | 881 | SPL1 "squamosa promoter bindin | 0.610 | 0.668 | 0.560 | 5.5e-256 | |
| TAIR|locus:2101402 | 927 | SPL12 "squamosa promoter-bindi | 0.809 | 0.841 | 0.551 | 1.4e-238 | |
| TAIR|locus:2037355 | 1035 | SPL14 "squamosa promoter bindi | 0.471 | 0.439 | 0.336 | 1.9e-106 | |
| TAIR|locus:2011706 | 988 | AT1G76580 [Arabidopsis thalian | 0.343 | 0.335 | 0.328 | 3.1e-78 | |
| TAIR|locus:504956101 | 333 | SPL8 "squamosa promoter bindin | 0.084 | 0.243 | 0.691 | 6.7e-27 | |
| TAIR|locus:2057656 | 131 | SPL3 "squamosa promoter bindin | 0.081 | 0.603 | 0.683 | 8.6e-27 | |
| TAIR|locus:2087105 | 181 | SPL5 "squamosa promoter bindin | 0.088 | 0.469 | 0.658 | 1.1e-26 | |
| TAIR|locus:2009675 | 174 | SPL4 "squamosa promoter bindin | 0.088 | 0.488 | 0.651 | 3e-26 | |
| TAIR|locus:2059974 | 375 | SPL9 "squamosa promoter bindin | 0.084 | 0.216 | 0.641 | 3.8e-26 | |
| TAIR|locus:2026428 | 405 | AT1G69170 [Arabidopsis thalian | 0.077 | 0.185 | 0.706 | 4.9e-26 |
| TAIR|locus:2041329 SPL1 "squamosa promoter binding protein-like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1698 (602.8 bits), Expect = 5.5e-256, Sum P(3) = 5.5e-256
Identities = 353/630 (56%), Positives = 433/630 (68%)
Query: 148 AVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGK 207
AVCQVE+C ADLS KDYHRRHKVCEMHSKA+ A VG ++QRFCQQCSRFH+LQEFDEGK
Sbjct: 104 AVCQVENCEADLSKVKDYHRRHKVCEMHSKATSATVGGILQRFCQQCSRFHLLQEFDEGK 163
Query: 208 RSCRRRLAGHNKRRRKTNPDAVANGSSPNNDQTSGYLLISLLRILSNMHSSRSDQRTDQD 267
RSCRRRLAGHNKRRRKTNP+ ANG+ P++D +S YLLI+LL+ILSNMH+ DQ D
Sbjct: 164 RSCRRRLAGHNKRRRKTNPEPGANGN-PSDDHSSNYLLITLLKILSNMHNHTGDQ----D 218
Query: 268 LLSHLLRGLASPAGENGGRGISGLLQE---HQDMLNERTSA--GNSEVVQAFLANGQGCP 322
L+SHLL+ L S AGE G+ + LL + Q LN SA G + Q L
Sbjct: 219 LMSHLLKSLVSHAGEQLGKNLVELLLQGGGSQGSLNIGNSALLGIEQAPQEELKQFSA-- 276
Query: 323 TPFRQQLNATVSEMPQQVSL-PHDARGA--EDQDEDVERSPVPANLGTSSIDCPSWVRXX 379
RQ AT + +QV + D + D DVERSP P N TSS+D PSW+
Sbjct: 277 ---RQDGTATENRSEKQVKMNDFDLNDIYIDSDDTDVERSPPPTNPATSSLDYPSWIHQS 333
Query: 380 XXXXXXXXXXGNXXXXXXXXXXXXXXXXXRTDRIVFKLFGKEPNDFPLVLRAQILDWLSH 439
+ RT RIVFKLFGKEPN+FP+VLR QILDWLSH
Sbjct: 334 SPPQTSR---NSDSASDQSPSSSSEDAQMRTGRIVFKLFGKEPNEFPIVLRGQILDWLSH 390
Query: 440 SPSDMESYIRPGCVILTIYLRQAEAAWEELCCDLTFXXXXXXXXXXXXFWTSGWVYARVQ 499
SP+DMESYIRPGC++LTIYLRQAE AWEEL DL F WT+GW+Y RVQ
Sbjct: 391 SPTDMESYIRPGCIVLTIYLRQAETAWEELSDDLGFSLGKLLDLSDDPLWTTGWIYVRVQ 450
Query: 500 HQIAFIYNGQVVLDTSLPPRSNNYSKILSVKPIAVPASERAQFFVKGINLGRSATRLLCA 559
+Q+AF+YNGQVV+DTSL +S +YS I+SVKP+A+ A+E+AQF VKG+NL + TRLLC+
Sbjct: 451 NQLAFVYNGQVVVDTSLSLKSRDYSHIISVKPLAIAATEKAQFTVKGMNLRQRGTRLLCS 510
Query: 560 VEGKYMVQEATHELLD-DVDGFKELDEL-QCVNFSCSIPAVTGRGFIEIEDHGFSSTFFP 617
VEGKY++QE TH+ + D FK+ E+ +CVNFSC +P ++GRGF+EIED G SS+FFP
Sbjct: 511 VEGKYLIQETTHDSTTREDDDFKDNSEIVECVNFSCDMPILSGRGFMEIEDQGLSSSFFP 570
Query: 618 FIVAEED-VCSEIRMLESALEFNRTDADVERFGKIDTKNQAMDFIHEIGWLFHRSQSKSR 676
F+V E+D VCSEIR+LE+ LEF TD+ QAMDFIHEIGWL HRS +
Sbjct: 571 FLVVEDDDVCSEIRILETTLEFTGTDS----------AKQAMDFIHEIGWLLHRS----K 616
Query: 677 LGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLA-LTEL 735
LG DPN +FPL RF+WLIEFSMD EWCAV++KLL++ DG V GE S A L+EL
Sbjct: 617 LGESDPNPGVFPLIRFQWLIEFSMDREWCAVIRKLLNMFFDGAV--GEFSSSSNATLSEL 674
Query: 736 GLLHRAVRKNSRPLVDLLLRFVPLEVSDRL 765
LLHRAVRKNS+P+V++LLR++P + + L
Sbjct: 675 CLLHRAVRKNSKPMVEMLLRYIPKQQRNSL 704
|
|
| TAIR|locus:2101402 SPL12 "squamosa promoter-binding protein-like 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2189 (775.6 bits), Expect = 1.4e-238, Sum P(2) = 1.4e-238
Identities = 465/843 (55%), Positives = 578/843 (68%)
Query: 147 RAVC-QVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDE 205
RA+C QV++CGADLS KDYHRRHKVCE+HSKA+ ALVG +MQRFCQQCSRFHVL+EFDE
Sbjct: 123 RAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFDE 182
Query: 206 GKRSCRRRLAGHNKRRRKTNPDAVANGSSPNNDQTSGYLLISLLRILSNMHSSRSDQRTD 265
GKRSCRRRLAGHNKRRRK NPD + NG+S ++DQTS Y+LI+LL+ILSN+HS++SDQ D
Sbjct: 183 GKRSCRRRLAGHNKRRRKANPDTIGNGTSMSDDQTSNYMLITLLKILSNIHSNQSDQTGD 242
Query: 266 QDLLSHLLRGLASPAGENGGRGISGLLQ------EHQDMLNERTSAGNSEVVQAFLANGQ 319
QDLLSHLL+ L S AGE+ GR + GLLQ Q++ N + + + +
Sbjct: 243 QDLLSHLLKSLVSQAGEHIGRNLVGLLQGGGGLQASQNIGNLSALLSLEQAPREDIKHHS 302
Query: 320 GCPTPFRQQLNATVSEM--P----QQVSLP----HDARGAEDQDEDVERSPVPANLGTSS 369
TP+++ + E P +QV + +D D D+ERS P +S
Sbjct: 303 VSETPWQEVYANSAQERVAPDRSEKQVKVNDFDLNDIYIDSDDTTDIERSSPPPTNPATS 362
Query: 370 IDCPSWVRXXXXXXXXXXXXGNXXXXXXXXXXXXXXXXXRTDRIVFKLFGKEPNDFPLVL 429
+ RTDRIVFKLFGKEPNDFP+ L
Sbjct: 363 -SLDYHQDSRQSSPPQTSRRNSDSASDQSPSSSSGDAQSRTDRIVFKLFGKEPNDFPVAL 421
Query: 430 RAQILDWLSHSPSDMESYIRPGCVILTIYLRQAEAAWEELCCDLTFXXXXXXXXXXXXFW 489
R QIL+WL+H+P+DMESYIRPGC++LTIYLRQ EA+WEELCCDL+F W
Sbjct: 422 RGQILNWLAHTPTDMESYIRPGCIVLTIYLRQDEASWEELCCDLSFSLRRLLDLSDDPLW 481
Query: 490 TSGWVYARVQHQIAFIYNGQVVLDTSLPPRSNNYSKILSVKPIAVPASERAQFFVKGINL 549
T GW+Y RVQ+Q+AF +NGQVVLDTSLP RS++YS+I++V+P+AV +++AQF VKGINL
Sbjct: 482 TDGWLYLRVQNQLAFAFNGQVVLDTSLPLRSHDYSQIITVRPLAV--TKKAQFTVKGINL 539
Query: 550 GRSATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQCVNFSCSIPAVTGRGFIEIEDH 609
R TRLLC VEG ++VQEAT +++ D KE +E+ VNFSC +P +GRGF+EIED
Sbjct: 540 RRPGTRLLCTVEGTHLVQEATQGGMEERDDLKENNEIDFVNFSCEMPIASGRGFMEIEDQ 599
Query: 610 G-FSSTFFPFIVAE-EDVCSEIRMLESALEFNRTDADVERFGKIDTKNQAMDFIHEIGWL 667
G SS+FFPFIV+E ED+CSEIR LES LEF TD+ + QAMDFIHEIGWL
Sbjct: 600 GGLSSSFFPFIVSEDEDICSEIRRLESTLEFTGTDSAM----------QAMDFIHEIGWL 649
Query: 668 FHRSQSKSRLGHLDPNT-DLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLD-GTVSLGEH 725
HRS+ KSRL D N DLF L RFK+LIEFSMD EWC V+KKLL+IL + GTV
Sbjct: 650 LHRSELKSRLAASDHNPEDLFSLIRFKFLIEFSMDREWCCVMKKLLNILFEEGTVD---- 705
Query: 726 PSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPD 785
PS D AL+EL LLHRAVRKNS+P+V++LLRF P + +N+ L LFRPD
Sbjct: 706 PSPDAALSELCLLHRAVRKNSKPMVEMLLRFSPKK-------KNQTLAG------LFRPD 752
Query: 786 VIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYS 845
GP GLTP+HIAAGKDGSEDVLDALT+DPGM GI+AWKN+RD++G TPEDYARLRGH+S
Sbjct: 753 AAGPGGLTPLHIAAGKDGSEDVLDALTEDPGMTGIQAWKNSRDNTGFTPEDYARLRGHFS 812
Query: 846 YIHLVQKKINKRPNGG-HVVVDICGVVPDS-NIYQKQNNESTASFEIGQTPVRPTQHN-C 902
YIHLVQ+K++++P HVVV+I P+S NI KQ S + + + TQ N C
Sbjct: 813 YIHLVQRKLSRKPIAKEHVVVNI----PESFNIEHKQEKRSP----MDSSSLEITQINQC 864
Query: 903 KLC-HQKLGYATASRSLVYKPAMLSMXXXXXXXXXXXLLFKSCPEVLYVFRPFRWEMLDY 961
KLC H+++ T +S+ Y+PAMLSM LLFKSCPEVLYVF+PFRWE+L+Y
Sbjct: 865 KLCDHKRVFVTTHHKSVAYRPAMLSMVAIAAVCVCVALLFKSCPEVLYVFQPFRWELLEY 924
Query: 962 GTS 964
GTS
Sbjct: 925 GTS 927
|
|
| TAIR|locus:2037355 SPL14 "squamosa promoter binding protein-like 14" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 680 (244.4 bits), Expect = 1.9e-106, Sum P(3) = 1.9e-106
Identities = 166/493 (33%), Positives = 265/493 (53%)
Query: 409 RTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPSDMESYIRPGCVILTIYLRQAEAAWEE 468
RT +IVFKL K+P+ P LR++I +WLS+ PS+MESYIRPGCV+L++Y+ + AAWE+
Sbjct: 504 RTGKIVFKLLDKDPSQLPGTLRSEIYNWLSNIPSEMESYIRPGCVVLSVYVAMSPAAWEQ 563
Query: 469 LCCDLTFXXXXXXXXXXXXFWTSGWVYARVQHQIAFIYNGQVVLDTSLPPRSNNYSKILS 528
L L FW + Q+A NG+V S R+ N +++S
Sbjct: 564 LEQKLLQRLGVLLQNSPSDFWRNARFIVNTGRQLASHKNGKVRCSKSW--RTWNSPELIS 621
Query: 529 VKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQC 588
V P+AV A E V+G +L + C G YM E T + DEL
Sbjct: 622 VSPVAVVAGEETSLVVRGRSLTNDGISIRCTHMGSYMAMEVTRAVCRQTI----FDELNV 677
Query: 589 VNFSCSI--PAVTGRGFIEIEDHGFSSTFFPFIVAEEDVCSEIRMLESALEFNRTDADVE 646
+F P GR FIE+E+ GF FP I+A +C E+ L D E
Sbjct: 678 NSFKVQNVHPGFLGRCFIEVEN-GFRGDSFPLIIANASICKELNRLGEEFHPKSQDMTEE 736
Query: 647 RFGKID----TKNQAMDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDH 702
+ + ++ + + F++E+GWLF ++Q+ L +D F L RFK+L+ S++
Sbjct: 737 QAQSSNRGPTSREEVLCFLNELGWLFQKNQTSE----LREQSD-FSLARFKFLLVCSVER 791
Query: 703 EWCAVVKKLLHILLDGTVSLGE--HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLE 760
++CA+++ LL +L++ + E +LD+ L E+ LL+RAV++ S +V+LL+ ++
Sbjct: 792 DYCALIRTLLDMLVERNLVNDELNREALDM-LAEIQLLNRAVKRKSTKMVELLIHYLVNP 850
Query: 761 VSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGI 820
++ L S K F+F P++ GP G+TP+H+AA GS+D++D LT+DP +G+
Sbjct: 851 LT--LSSSRK---------FVFLPNITGPGGITPLHLAACTSGSDDMIDLLTNDPQEIGL 899
Query: 821 EAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKI----NKRP--NGGHVVVDICGVVPDS 874
+W RD++G TP YA +R +++Y LV +K+ NK+ N H VVD G+
Sbjct: 900 SSWNTLRDATGQTPYSYAAIRNNHNYNSLVARKLADKRNKQVSLNIEHEVVDQTGLSKRL 959
Query: 875 NIYQKQNNESTAS 887
++ +++ S AS
Sbjct: 960 SLEMNKSSSSCAS 972
|
|
| TAIR|locus:2011706 AT1G76580 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 475 (172.3 bits), Expect = 3.1e-78, Sum P(3) = 3.1e-78
Identities = 117/356 (32%), Positives = 192/356 (53%)
Query: 409 RTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPSDMESYIRPGCVILTIYLRQAEAAWEE 468
RT +I FKLF K+P+ P LR +I WLS PSDMES+IRPGCVIL++Y+ + +AWE+
Sbjct: 469 RTGKISFKLFEKDPSQLPNTLRTEIFRWLSSFPSDMESFIRPGCVILSVYVAMSASAWEQ 528
Query: 469 LCCDLTFXXXXXXXXXXXXFWTSGWVYARVQHQIAFIYNGQVVLDTSLPPRSNNYSKILS 528
L + FW++ Q+A +G++ L S R+ N ++++
Sbjct: 529 L--EENLLQRVRSLVQDSEFWSNSRFLVNAGRQLASHKHGRIRLSKSW--RTLNLPELIT 584
Query: 529 VKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQC 588
V P+AV A E V+G NL RL CA G Y E T ++DEL
Sbjct: 585 VSPLAVVAGEETALIVRGRNLTNDGMRLRCAHMGNYASMEVTGR----EHRLTKVDELNV 640
Query: 589 VNFSC-SIPAVT-GRGFIEIEDHGFSSTFFPFIVAEEDVCSEIRMLESALEFNRTDADVE 646
+F S +V+ GR FIE+E+ G FP I+A +C E+ LE EF+ D E
Sbjct: 641 SSFQVQSASSVSLGRCFIELEN-GLRGDNFPLIIANATICKELNRLEE--EFHPKDVIEE 697
Query: 647 RFGKID---TKNQAMDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHE 703
+ +D ++ + + F++E+GWLF R + H +P+ F L RFK+L+ S++ +
Sbjct: 698 QIQNLDRPRSREEVLCFLNELGWLFQRKWTSDI--HGEPD---FSLPRFKFLLVCSVERD 752
Query: 704 WCAVVKKLLHILLD---GTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRF 756
+C++++ +L ++++ G L SLD+ L ++ LL+RA+++ + + + L+ +
Sbjct: 753 YCSLIRTVLDMMVERNLGKDGLLNKESLDM-LADIQLLNRAIKRRNTKMAETLIHY 807
|
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| TAIR|locus:504956101 SPL8 "squamosa promoter binding protein-like 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 313 (115.2 bits), Expect = 6.7e-27, P = 6.7e-27
Identities = 56/81 (69%), Positives = 63/81 (77%)
Query: 150 CQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRS 209
CQ E C ADLS+AK YHRRHKVCE HSKAS + + QRFCQQCSRFH+L EFD GKRS
Sbjct: 188 CQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCSRFHLLSEFDNGKRS 247
Query: 210 CRRRLAGHNKRRRKTNPDAVA 230
CR+RLA HN+RRRK + A A
Sbjct: 248 CRKRLADHNRRRRKCHQSASA 268
|
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| TAIR|locus:2057656 SPL3 "squamosa promoter binding protein-like 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 312 (114.9 bits), Expect = 8.6e-27, P = 8.6e-27
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 149 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKR 208
VCQVE C AD+S AK YH+RHKVC+ H+KA + + QRFCQQCSRFH L EFDE KR
Sbjct: 53 VCQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCSRFHALSEFDEAKR 112
Query: 209 SCRRRLAGHNKRRRKTNPD 227
SCRRRLAGHN+RRRK+ D
Sbjct: 113 SCRRRLAGHNERRRKSTTD 131
|
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| TAIR|locus:2087105 SPL5 "squamosa promoter binding protein-like 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 311 (114.5 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 56/85 (65%), Positives = 67/85 (78%)
Query: 149 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKR 208
+CQV+ C +L+ AK Y+RRH+VCE+H+KAS A V V QRFCQQCSRFH L EFDE KR
Sbjct: 62 LCQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQCSRFHELPEFDEAKR 121
Query: 209 SCRRRLAGHNKRRRKTNPDAVANGS 233
SCRRRLAGHN+RRRK + D+ GS
Sbjct: 122 SCRRRLAGHNERRRKISGDSFGEGS 146
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| TAIR|locus:2009675 SPL4 "squamosa promoter binding protein-like 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 307 (113.1 bits), Expect = 3.0e-26, P = 3.0e-26
Identities = 56/86 (65%), Positives = 68/86 (79%)
Query: 149 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKR 208
+CQV+ C AD+ AK YHRRHKVCE+H+KAS + + QRFCQQCSRFH LQEFDE KR
Sbjct: 53 LCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKR 112
Query: 209 SCRRRLAGHNKRRRKTNPDAV-ANGS 233
SCRRRLAGHN+RRRK++ ++ GS
Sbjct: 113 SCRRRLAGHNERRRKSSGESTYGEGS 138
|
|
| TAIR|locus:2059974 SPL9 "squamosa promoter binding protein-like 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 292 (107.8 bits), Expect = 3.8e-26, Sum P(2) = 3.8e-26
Identities = 52/81 (64%), Positives = 62/81 (76%)
Query: 150 CQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRS 209
CQVE CG DL+NAK Y+ RH+VC +HSK + V + QRFCQQCSRFH L EFD KRS
Sbjct: 74 CQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSRFHQLPEFDLEKRS 133
Query: 210 CRRRLAGHNKRRRKTNPDAVA 230
CRRRLAGHN+RRRK P +++
Sbjct: 134 CRRRLAGHNERRRKPQPASLS 154
|
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| TAIR|locus:2026428 AT1G69170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 305 (112.4 bits), Expect = 4.9e-26, P = 4.9e-26
Identities = 53/75 (70%), Positives = 62/75 (82%)
Query: 149 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKR 208
+CQV C DLS++KDYH+RH+VCE HSK S +V + QRFCQQCSRFH L EFD+GKR
Sbjct: 123 LCQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFHFLSEFDDGKR 182
Query: 209 SCRRRLAGHNKRRRK 223
SCRRRLAGHN+RRRK
Sbjct: 183 SCRRRLAGHNERRRK 197
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q75LH6 | SPL6_ORYSJ | No assigned EC number | 0.4384 | 0.9574 | 0.9525 | yes | no |
| Q9SMX9 | SPL1_ARATH | No assigned EC number | 0.5814 | 0.8952 | 0.9795 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00028195001 | SubName- Full=Chromosome chr7 scaffold_42, whole genome shotgun sequence; (844 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 964 | |||
| pfam03110 | 79 | pfam03110, SBP, SBP domain | 9e-52 | |
| cd00204 | 126 | cd00204, ANK, ankyrin repeats; ankyrin repeats med | 3e-05 | |
| pfam12796 | 91 | pfam12796, Ank_2, Ankyrin repeats (3 copies) | 0.003 |
| >gnl|CDD|190527 pfam03110, SBP, SBP domain | Back alignment and domain information |
|---|
Score = 175 bits (445), Expect = 9e-52
Identities = 64/79 (81%), Positives = 68/79 (86%)
Query: 149 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKR 208
CQVE CGADLSNAKDYHRRHKVCE+HSKA LV + QRFCQQCSRFH+L EFDEGKR
Sbjct: 1 RCQVEGCGADLSNAKDYHRRHKVCEVHSKAPVVLVSGLEQRFCQQCSRFHLLSEFDEGKR 60
Query: 209 SCRRRLAGHNKRRRKTNPD 227
SCRRRLAGHN+RRRK PD
Sbjct: 61 SCRRRLAGHNERRRKPQPD 79
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SBP domains (for SQUAMOSA-pROMOTER BINDING PROTEIN) are found in plant proteins. It is a sequence specific DNA-binding domain. Members of family probably function as transcription factors involved in the control of early flower development. The domain contains 10 conserved cysteine and histidine residues that probably are zinc ligands. Length = 79 |
| >gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 3e-05
Identities = 34/124 (27%), Positives = 44/124 (35%), Gaps = 20/124 (16%)
Query: 737 LLHRAVRKNSRPLVDLLLRF-VPLEVSDRLGSENKALVDGVHKG------FLFR----PD 785
LH A +V LLL + D G L G L +
Sbjct: 10 PLHLAASNGHLEVVKLLLENGADVNAKDNDG--RTPLHLAAKNGHLEIVKLLLEKGADVN 67
Query: 786 VIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYS 845
G TP+H+AA ++G+ DV+ L A NARD G TP A GH
Sbjct: 68 ARDKDGNTPLHLAA-RNGNLDVVKLLLKHG------ADVNARDKDGRTPLHLAAKNGHLE 120
Query: 846 YIHL 849
+ L
Sbjct: 121 VVKL 124
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126 |
| >gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies) | Back alignment and domain information |
|---|
Score = 37.6 bits (88), Expect = 0.003
Identities = 26/120 (21%), Positives = 43/120 (35%), Gaps = 34/120 (28%)
Query: 738 LHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHI 797
LH A + + LV LLL E A V+ T +H+
Sbjct: 1 LHLAAKNGNLELVKLLL-------------EKGADVNLGDTD-------------TALHL 34
Query: 798 AAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIH-LVQKKINK 856
AA G+ +++ L + A NA+D G+T A G+ + L++ +
Sbjct: 35 AARN-GNLEIVKLL------LEHGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADI 87
|
Length = 91 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 964 | |||
| PF03110 | 79 | SBP: SBP domain; InterPro: IPR004333 The SBP plant | 100.0 | |
| KOG4412 | 226 | consensus 26S proteasome regulatory complex, subun | 99.82 | |
| PHA02875 | 413 | ankyrin repeat protein; Provisional | 99.81 | |
| PHA02791 | 284 | ankyrin-like protein; Provisional | 99.8 | |
| PHA02875 | 413 | ankyrin repeat protein; Provisional | 99.77 | |
| KOG4412 | 226 | consensus 26S proteasome regulatory complex, subun | 99.76 | |
| PHA03100 | 480 | ankyrin repeat protein; Provisional | 99.76 | |
| KOG0509 | 600 | consensus Ankyrin repeat and DHHC-type Zn-finger d | 99.75 | |
| PHA02874 | 434 | ankyrin repeat protein; Provisional | 99.74 | |
| PHA02878 | 477 | ankyrin repeat protein; Provisional | 99.73 | |
| PHA02874 | 434 | ankyrin repeat protein; Provisional | 99.73 | |
| PHA03100 | 480 | ankyrin repeat protein; Provisional | 99.73 | |
| PHA02791 | 284 | ankyrin-like protein; Provisional | 99.72 | |
| PHA03095 | 471 | ankyrin-like protein; Provisional | 99.72 | |
| PHA02859 | 209 | ankyrin repeat protein; Provisional | 99.72 | |
| PHA02741 | 169 | hypothetical protein; Provisional | 99.7 | |
| PHA02946 | 446 | ankyin-like protein; Provisional | 99.68 | |
| PHA02798 | 489 | ankyrin-like protein; Provisional | 99.68 | |
| PHA02946 | 446 | ankyin-like protein; Provisional | 99.68 | |
| PHA03095 | 471 | ankyrin-like protein; Provisional | 99.67 | |
| PHA02989 | 494 | ankyrin repeat protein; Provisional | 99.67 | |
| PHA02876 | 682 | ankyrin repeat protein; Provisional | 99.67 | |
| PHA02859 | 209 | ankyrin repeat protein; Provisional | 99.66 | |
| KOG0510 | 929 | consensus Ankyrin repeat protein [General function | 99.66 | |
| PHA02878 | 477 | ankyrin repeat protein; Provisional | 99.66 | |
| PHA02743 | 166 | Viral ankyrin protein; Provisional | 99.65 | |
| KOG0508 | 615 | consensus Ankyrin repeat protein [General function | 99.65 | |
| PHA02795 | 437 | ankyrin-like protein; Provisional | 99.64 | |
| PHA02716 | 764 | CPXV016; CPX019; EVM010; Provisional | 99.64 | |
| PHA02876 | 682 | ankyrin repeat protein; Provisional | 99.64 | |
| PHA02736 | 154 | Viral ankyrin protein; Provisional | 99.64 | |
| KOG0509 | 600 | consensus Ankyrin repeat and DHHC-type Zn-finger d | 99.63 | |
| PHA02798 | 489 | ankyrin-like protein; Provisional | 99.63 | |
| KOG4177 | 1143 | consensus Ankyrin [Cell wall/membrane/envelope bio | 99.61 | |
| PHA02716 | 764 | CPXV016; CPX019; EVM010; Provisional | 99.59 | |
| PHA02917 | 661 | ankyrin-like protein; Provisional | 99.59 | |
| PLN03192 | 823 | Voltage-dependent potassium channel; Provisional | 99.58 | |
| PHA02989 | 494 | ankyrin repeat protein; Provisional | 99.58 | |
| PHA02884 | 300 | ankyrin repeat protein; Provisional | 99.56 | |
| PLN03192 | 823 | Voltage-dependent potassium channel; Provisional | 99.52 | |
| PHA02917 | 661 | ankyrin-like protein; Provisional | 99.51 | |
| KOG4177 | 1143 | consensus Ankyrin [Cell wall/membrane/envelope bio | 99.51 | |
| KOG0508 | 615 | consensus Ankyrin repeat protein [General function | 99.51 | |
| PF12796 | 89 | Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02 | 99.5 | |
| KOG0514 | 452 | consensus Ankyrin repeat protein [General function | 99.49 | |
| PHA02795 | 437 | ankyrin-like protein; Provisional | 99.48 | |
| TIGR00870 | 743 | trp transient-receptor-potential calcium channel p | 99.46 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.46 | |
| TIGR00870 | 743 | trp transient-receptor-potential calcium channel p | 99.45 | |
| PF12796 | 89 | Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02 | 99.44 | |
| KOG0510 | 929 | consensus Ankyrin repeat protein [General function | 99.44 | |
| PHA02741 | 169 | hypothetical protein; Provisional | 99.41 | |
| KOG0512 | 228 | consensus Fetal globin-inducing factor (contains a | 99.41 | |
| KOG0502 | 296 | consensus Integral membrane ankyrin-repeat protein | 99.39 | |
| cd00204 | 126 | ANK ankyrin repeats; ankyrin repeats mediate prote | 99.37 | |
| PHA02730 | 672 | ankyrin-like protein; Provisional | 99.36 | |
| PHA02743 | 166 | Viral ankyrin protein; Provisional | 99.35 | |
| KOG0502 | 296 | consensus Integral membrane ankyrin-repeat protein | 99.35 | |
| COG0666 | 235 | Arp FOG: Ankyrin repeat [General function predicti | 99.3 | |
| PHA02730 | 672 | ankyrin-like protein; Provisional | 99.28 | |
| PHA02884 | 300 | ankyrin repeat protein; Provisional | 99.27 | |
| KOG0505 | 527 | consensus Myosin phosphatase, regulatory subunit [ | 99.26 | |
| KOG0507 | 854 | consensus CASK-interacting adaptor protein (caskin | 99.25 | |
| KOG0512 | 228 | consensus Fetal globin-inducing factor (contains a | 99.24 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.24 | |
| PHA02792 | 631 | ankyrin-like protein; Provisional | 99.24 | |
| KOG0514 | 452 | consensus Ankyrin repeat protein [General function | 99.23 | |
| PHA02736 | 154 | Viral ankyrin protein; Provisional | 99.23 | |
| cd00204 | 126 | ANK ankyrin repeats; ankyrin repeats mediate prote | 99.17 | |
| PF13637 | 54 | Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A | 99.16 | |
| PHA02792 | 631 | ankyrin-like protein; Provisional | 99.14 | |
| PF13857 | 56 | Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A | 99.12 | |
| PTZ00322 | 664 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas | 99.1 | |
| KOG3676 | 782 | consensus Ca2+-permeable cation channel OSM-9 and | 99.05 | |
| KOG0507 | 854 | consensus CASK-interacting adaptor protein (caskin | 99.05 | |
| PF13637 | 54 | Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A | 99.0 | |
| PTZ00322 | 664 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas | 98.98 | |
| COG0666 | 235 | Arp FOG: Ankyrin repeat [General function predicti | 98.96 | |
| KOG0515 | 752 | consensus p53-interacting protein 53BP/ASPP, conta | 98.92 | |
| KOG4214 | 117 | consensus Myotrophin and similar proteins [Transcr | 98.91 | |
| KOG3676 | 782 | consensus Ca2+-permeable cation channel OSM-9 and | 98.86 | |
| KOG1710 | 396 | consensus MYND Zn-finger and ankyrin repeat protei | 98.85 | |
| KOG4214 | 117 | consensus Myotrophin and similar proteins [Transcr | 98.85 | |
| KOG0515 | 752 | consensus p53-interacting protein 53BP/ASPP, conta | 98.84 | |
| KOG4369 | 2131 | consensus RTK signaling protein MASK/UNC-44 [Signa | 98.84 | |
| KOG0506 | 622 | consensus Glutaminase (contains ankyrin repeat) [A | 98.76 | |
| KOG4369 | 2131 | consensus RTK signaling protein MASK/UNC-44 [Signa | 98.73 | |
| PF13857 | 56 | Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A | 98.71 | |
| KOG0505 | 527 | consensus Myosin phosphatase, regulatory subunit [ | 98.67 | |
| KOG0818 | 669 | consensus GTPase-activating proteins of the GIT fa | 98.59 | |
| KOG1710 | 396 | consensus MYND Zn-finger and ankyrin repeat protei | 98.43 | |
| KOG0705 | 749 | consensus GTPase-activating protein Centaurin gamm | 98.22 | |
| PF00023 | 33 | Ank: Ankyrin repeat Hereditary spherocytosis; Inte | 98.14 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 98.08 | |
| KOG0782 | 1004 | consensus Predicted diacylglycerol kinase [Signal | 98.07 | |
| KOG0522 | 560 | consensus Ankyrin repeat protein [General function | 98.07 | |
| PF13606 | 30 | Ank_3: Ankyrin repeat | 98.0 | |
| KOG3609 | 822 | consensus Receptor-activated Ca2+-permeable cation | 97.91 | |
| KOG0521 | 785 | consensus Putative GTPase activating proteins (GAP | 97.74 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 97.61 | |
| KOG2384 | 223 | consensus Major histocompatibility complex protein | 97.56 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 97.56 | |
| PF00023 | 33 | Ank: Ankyrin repeat Hereditary spherocytosis; Inte | 97.49 | |
| KOG0818 | 669 | consensus GTPase-activating proteins of the GIT fa | 97.45 | |
| KOG0522 | 560 | consensus Ankyrin repeat protein [General function | 97.43 | |
| KOG0705 | 749 | consensus GTPase-activating protein Centaurin gamm | 97.42 | |
| PF13606 | 30 | Ank_3: Ankyrin repeat | 97.38 | |
| KOG0506 | 622 | consensus Glutaminase (contains ankyrin repeat) [A | 97.22 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 97.16 | |
| KOG0782 | 1004 | consensus Predicted diacylglycerol kinase [Signal | 97.0 | |
| KOG3609 | 822 | consensus Receptor-activated Ca2+-permeable cation | 96.41 | |
| KOG0511 | 516 | consensus Ankyrin repeat protein [General function | 96.33 | |
| KOG2505 | 591 | consensus Ankyrin repeat protein [General function | 96.29 | |
| KOG0511 | 516 | consensus Ankyrin repeat protein [General function | 96.16 | |
| KOG0521 | 785 | consensus Putative GTPase activating proteins (GAP | 95.69 | |
| smart00248 | 30 | ANK ankyrin repeats. Ankyrin repeats are about 33 | 94.8 | |
| KOG2384 | 223 | consensus Major histocompatibility complex protein | 93.27 | |
| KOG2505 | 591 | consensus Ankyrin repeat protein [General function | 92.16 | |
| smart00248 | 30 | ANK ankyrin repeats. Ankyrin repeats are about 33 | 92.12 |
| >PF03110 SBP: SBP domain; InterPro: IPR004333 The SBP plant protein domain is a sequence specific DNA-binding domain [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=263.07 Aligned_cols=78 Identities=65% Similarity=1.133 Sum_probs=63.2
Q ss_pred ceeccCCchhhccChhhhcccccchhhcCcceeeeCCcchhhhhhhccCcccccccCccchHHHHHhhhhhhhccCCC
Q 002122 149 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNP 226 (964)
Q Consensus 149 ~Cqv~gC~~~l~~~k~y~~R~~vC~~H~ka~~v~~~G~~~RfCQqC~rfh~l~eFd~~krsCr~~L~~hn~rrr~~~~ 226 (964)
+||||||++||+.+|.||+||||||.|+||++|+++|.++||||||+|||+|+||||+|||||++|++||+||||+++
T Consensus 1 ~CqV~gC~~dL~~~k~Y~rR~rICe~H~ka~~V~~~G~~~RFCQQC~rfh~l~eFdg~kRSCr~~L~~h~~RRr~~~~ 78 (79)
T PF03110_consen 1 RCQVDGCGADLSGAKEYHRRYRICEEHAKAPVVVVDGVEQRFCQQCGRFHPLSEFDGGKRSCRARLARHNERRRKRQQ 78 (79)
T ss_dssp C-SSTTEE-EETS--SSCCCTT--HHHHTHSEEEETTEEEEE-TTTSSEEETTCB-SSTTSBSTTTT-SSS---S-S-
T ss_pred CCcCCCCCcchhhhHHHhhccCcchhhcCCCeEEECChhHHHHHHHHcCCCHHHHcchhhhHHHHHHHHHHHhccccC
Confidence 699999999999999999999999999999999999999999999999999999999999999999999999999875
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Proteins with this domain probably function as transcription factors involved in the control of early flower development. The domain contains 10 conserved cysteine and histidine residues that probably are zinc ligands.; GO: 0003677 DNA binding, 0005634 nucleus; PDB: 1UL4_A 1WJ0_A 1UL5_A. |
| >KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.3e-20 Score=186.71 Aligned_cols=183 Identities=20% Similarity=0.157 Sum_probs=147.9
Q ss_pred hHHHHHHHHhhhcC-cchhh-hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcC
Q 002122 627 SEIRMLESALEFNR-TDADV-ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHE 703 (964)
Q Consensus 627 sEI~~LE~~le~~a-~~~~~-~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g 703 (964)
.|..++|.+++..- +.-.- +.++|+++|-+| .+.-..+.+||..+.. ..+.-| .-..+|||.|+..|
T Consensus 14 ~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv--~~ddkD--------daGWtPlhia~s~g 83 (226)
T KOG4412|consen 14 CEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNV--KPDDKD--------DAGWTPLHIAASNG 83 (226)
T ss_pred chHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCC--CCCCcc--------ccCCchhhhhhhcC
Confidence 35667777776544 22222 337999999999 6989999999874432 222111 12467999999999
Q ss_pred chHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccC
Q 002122 704 WCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFR 783 (964)
Q Consensus 704 ~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fd 783 (964)
..+||+.||+.- .++.+ ..+..|.|+||||+.+|..+|+++||+. |+ .
T Consensus 84 ~~evVk~Ll~r~---~advn-----a~tn~G~T~LHyAagK~r~eIaqlLle~-------ga-----------------~ 131 (226)
T KOG4412|consen 84 NDEVVKELLNRS---GADVN-----ATTNGGQTCLHYAAGKGRLEIAQLLLEK-------GA-----------------L 131 (226)
T ss_pred cHHHHHHHhcCC---CCCcc-----eecCCCcceehhhhcCChhhHHHHHHhc-------CC-----------------C
Confidence 999999999841 12211 1355699999999999999999999999 88 8
Q ss_pred CCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 784 PDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 784 pn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
++++|..|.||||-||. -|...|+++|+.. +|.+|..|+.|+||||.|...||.++..+|.+++++..
T Consensus 132 i~~kD~~~qtplHRAAa-vGklkvie~Li~~------~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~ 199 (226)
T KOG4412|consen 132 IRIKDKQGQTPLHRAAA-VGKLKVIEYLISQ------GAPLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTD 199 (226)
T ss_pred CcccccccCchhHHHHh-ccchhhHHHHHhc------CCCCCcccccCccHHHHHHhccCchHHHHHHHhcccee
Confidence 99999999999999999 9999999999999 99999999999999999988899999999999998654
|
|
| >PHA02875 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.2e-19 Score=199.99 Aligned_cols=125 Identities=19% Similarity=0.134 Sum_probs=68.3
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.+|||+|+..++.++++.|++.+++ .. ..+..|.||||+|+..|+.++|++|+++ |+
T Consensus 103 ~tpL~~A~~~~~~~iv~~Ll~~gad----~~-----~~~~~g~tpLh~A~~~~~~~~v~~Ll~~-------g~------- 159 (413)
T PHA02875 103 MTPLHLATILKKLDIMKLLIARGAD----PD-----IPNTDKFSPLHLAVMMGDIKGIELLIDH-------KA------- 159 (413)
T ss_pred CCHHHHHHHhCCHHHHHHHHhCCCC----CC-----CCCCCCCCHHHHHHHcCCHHHHHHHHhc-------CC-------
Confidence 3455555555555555555543211 11 0122344555555555555555555555 33
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCC-CCHHHHHHHcCCHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSG-STPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G-~TPLh~A~~rGh~svv~LL~ 851 (964)
++|.+|..|.||||+|+. .|+.+++++|+++ ||+++..|..| .||+|+|+..|+.+++++|.
T Consensus 160 ----------~~~~~d~~g~TpL~~A~~-~g~~eiv~~Ll~~------ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll 222 (413)
T PHA02875 160 ----------CLDIEDCCGCTPLIIAMA-KGDIAICKMLLDS------GANIDYFGKNGCVAALCYAIENNKIDIVRLFI 222 (413)
T ss_pred ----------CCCCCCCCCCCHHHHHHH-cCCHHHHHHHHhC------CCCCCcCCCCCCchHHHHHHHcCCHHHHHHHH
Confidence 555566666666666666 6666666666666 66666666554 35666666666666666666
Q ss_pred HhhhcC
Q 002122 852 KKINKR 857 (964)
Q Consensus 852 ~k~ak~ 857 (964)
+++++.
T Consensus 223 ~~gad~ 228 (413)
T PHA02875 223 KRGADC 228 (413)
T ss_pred HCCcCc
Confidence 666553
|
|
| >PHA02791 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.4e-19 Score=192.99 Aligned_cols=189 Identities=15% Similarity=0.061 Sum_probs=149.5
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
+..|++.|... ..+..++.+++.++.... .++.+++|.++ .+....+.+|+..+...... ....
T Consensus 30 G~TpLh~Aa~~--g~~eiv~~Ll~~ga~~n~--~d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~-----------d~~G 94 (284)
T PHA02791 30 GHSALYYAIAD--NNVRLVCTLLNAGALKNL--LENEFPLHQAATLEDTKIVKILLFSGMDDSQF-----------DDKG 94 (284)
T ss_pred CCcHHHHHHHc--CCHHHHHHHHHCcCCCcC--CCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCC-----------CCCC
Confidence 47889888765 667777888888875433 24689999998 47778888888766432221 1245
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCC-CcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTE-LGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G-~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
++|||+|+..|+.++|+.|++..++.+ . .+..| .||||+||..|+.++|++||.. |.
T Consensus 95 ~TpLh~Aa~~g~~eivk~Ll~~gadin--------~-~~~~g~~TpL~~Aa~~g~~eivk~LL~~-------~~------ 152 (284)
T PHA02791 95 NTALYYAVDSGNMQTVKLFVKKNWRLM--------F-YGKTGWKTSFYHAVMLNDVSIVSYFLSE-------IP------ 152 (284)
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCcC--------c-cCCCCCcHHHHHHHHcCCHHHHHHHHhc-------CC------
Confidence 789999999999999999998654321 1 23335 4899999999999999999988 22
Q ss_pred cccccccccccCCCcCC-CCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCH-HHHHHHcCCHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIG-PAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTP-EDYARLRGHYSYIHL 849 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d-~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TP-Lh~A~~rGh~svv~L 849 (964)
+..| ..|.||||+||. .|+.++|++|+++ ||++|.+|..|.|| ||+|+..|+.+++++
T Consensus 153 -------------~~~d~~~g~TpLh~Aa~-~g~~eiv~lLL~~------gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~l 212 (284)
T PHA02791 153 -------------STFDLAILLSCIHITIK-NGHVDMMILLLDY------MTSTNTNNSLLFIPDIKLAIDNKDLEMLQA 212 (284)
T ss_pred -------------cccccccCccHHHHHHH-cCCHHHHHHHHHC------CCCCCcccCCCCChHHHHHHHcCCHHHHHH
Confidence 2222 258999999999 9999999999999 99999999999987 999999999999999
Q ss_pred HHHhhhcCCC
Q 002122 850 VQKKINKRPN 859 (964)
Q Consensus 850 L~~k~ak~~~ 859 (964)
|.+++++...
T Consensus 213 Ll~~Ga~in~ 222 (284)
T PHA02791 213 LFKYDINIYS 222 (284)
T ss_pred HHHCCCCCcc
Confidence 9999987643
|
|
| >PHA02875 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.8e-18 Score=192.29 Aligned_cols=188 Identities=15% Similarity=0.129 Sum_probs=157.9
Q ss_pred cchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHH
Q 002122 621 AEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFS 699 (964)
Q Consensus 621 ad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fA 699 (964)
..+...+++..++.+++.|++.......|.+++|.++ .+.+..+.+|+..+...... .....++||+|
T Consensus 7 ~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~-----------~~~~~t~L~~A 75 (413)
T PHA02875 7 CDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVK-----------YPDIESELHDA 75 (413)
T ss_pred HHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccc-----------CCCcccHHHHH
Confidence 3466678999999999998876555567999999998 57788888888877421111 12246799999
Q ss_pred HHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccc
Q 002122 700 MDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKG 779 (964)
Q Consensus 700 ve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~ 779 (964)
+..|+.++|+.|++...... . ..+..|.||||+|+..|+.++|++|+++ |+
T Consensus 76 ~~~g~~~~v~~Ll~~~~~~~----~----~~~~~g~tpL~~A~~~~~~~iv~~Ll~~-------ga-------------- 126 (413)
T PHA02875 76 VEEGDVKAVEELLDLGKFAD----D----VFYKDGMTPLHLATILKKLDIMKLLIAR-------GA-------------- 126 (413)
T ss_pred HHCCCHHHHHHHHHcCCccc----c----cccCCCCCHHHHHHHhCCHHHHHHHHhC-------CC--------------
Confidence 99999999999999654211 0 0234588999999999999999999999 88
Q ss_pred cccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 780 FLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 780 y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
+++..+..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.+++++..
T Consensus 127 ---d~~~~~~~g~tpLh~A~~-~~~~~~v~~Ll~~------g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n 195 (413)
T PHA02875 127 ---DPDIPNTDKFSPLHLAVM-MGDIKGIELLIDH------KACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANID 195 (413)
T ss_pred ---CCCCCCCCCCCHHHHHHH-cCCHHHHHHHHhc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC
Confidence 899999999999999999 9999999999999 99999999999999999999999999999999988643
|
|
| >KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.3e-19 Score=178.33 Aligned_cols=127 Identities=20% Similarity=0.193 Sum_probs=113.6
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
.++|||+||..|+.++|.+||.. .++..++ ++..|+||||+|+..|+.++|+-||... |+
T Consensus 38 ~Rt~LHwa~S~g~~eiv~fLlsq---~nv~~dd-----kDdaGWtPlhia~s~g~~evVk~Ll~r~------~a------ 97 (226)
T KOG4412|consen 38 GRTPLHWACSFGHVEIVYFLLSQ---PNVKPDD-----KDDAGWTPLHIAASNGNDEVVKELLNRS------GA------ 97 (226)
T ss_pred CCceeeeeeecCchhHHHHHHhc---CCCCCCC-----ccccCCchhhhhhhcCcHHHHHHHhcCC------CC------
Confidence 58899999999999999999972 2232222 3566999999999999999999999872 56
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
++|.++.+|+|+||+||. .|..+|+.+|+++ ||.++++|..|.||||-|+.-|+..+|++|+
T Consensus 98 -----------dvna~tn~G~T~LHyAag-K~r~eIaqlLle~------ga~i~~kD~~~qtplHRAAavGklkvie~Li 159 (226)
T KOG4412|consen 98 -----------DVNATTNGGQTCLHYAAG-KGRLEIAQLLLEK------GALIRIKDKQGQTPLHRAAAVGKLKVIEYLI 159 (226)
T ss_pred -----------CcceecCCCcceehhhhc-CChhhHHHHHHhc------CCCCcccccccCchhHHHHhccchhhHHHHH
Confidence 899999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred Hhhhc
Q 002122 852 KKINK 856 (964)
Q Consensus 852 ~k~ak 856 (964)
..++.
T Consensus 160 ~~~a~ 164 (226)
T KOG4412|consen 160 SQGAP 164 (226)
T ss_pred hcCCC
Confidence 87763
|
|
| >PHA03100 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.9e-18 Score=191.74 Aligned_cols=193 Identities=18% Similarity=0.119 Sum_probs=162.3
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HH--HHHHHhhhhcccccccccCCCCCCCCCcCcc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MD--FIHEIGWLFHRSQSKSRLGHLDPNTDLFPLR 690 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~--fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~ 690 (964)
+..|+++|.......+..++.+++.++.....+..|.+++|.++ .+ .+..+.+|++++......+ .
T Consensus 106 g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d-----------~ 174 (480)
T PHA03100 106 GITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKN-----------R 174 (480)
T ss_pred CCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCccccc-----------C
Confidence 47788887733447888899999998877666678899999998 46 7888999998875322222 1
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCC------CcHHHHHHHcCC--HHHHHHHhccCCCccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTE------LGLLHRAVRKNS--RPLVDLLLRFVPLEVS 762 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G------~TpLH~AVr~g~--~e~VelLL~~~p~~~~ 762 (964)
...+|||+|+..|+.++++.|++.+++... .+..+ .||||.|+..++ .++|++|+++
T Consensus 175 ~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~---------~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~------ 239 (480)
T PHA03100 175 YGYTPLHIAVEKGNIDVIKFLLDNGADINA---------GDIETLLFTIFETPLHIAACYNEITLEVVNYLLSY------ 239 (480)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCccC---------CCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHc------
Confidence 357899999999999999999997654321 12223 699999999999 9999999999
Q ss_pred cccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcC
Q 002122 763 DRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRG 842 (964)
Q Consensus 763 dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rG 842 (964)
|+ ++|.+|..|.||||+|+. .|+.+++++|++. ||+++.+|..|.||+|+|+..+
T Consensus 240 -g~-----------------din~~d~~g~TpL~~A~~-~~~~~iv~~Ll~~------gad~n~~d~~g~tpl~~A~~~~ 294 (480)
T PHA03100 240 -GV-----------------PINIKDVYGFTPLHYAVY-NNNPEFVKYLLDL------GANPNLVNKYGDTPLHIAILNN 294 (480)
T ss_pred -CC-----------------CCCCCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCccCCCCCcHHHHHHHhC
Confidence 77 889999999999999999 9999999999999 9999999999999999999999
Q ss_pred CHHHHHHHHHhhhcC
Q 002122 843 HYSYIHLVQKKINKR 857 (964)
Q Consensus 843 h~svv~LL~~k~ak~ 857 (964)
+.+++++|.+++++.
T Consensus 295 ~~~iv~~Ll~~g~~i 309 (480)
T PHA03100 295 NKEIFKLLLNNGPSI 309 (480)
T ss_pred CHHHHHHHHhcCCCH
Confidence 999999999988754
|
|
| >KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.3e-18 Score=199.16 Aligned_cols=198 Identities=20% Similarity=0.178 Sum_probs=164.3
Q ss_pred hhhhhHHHHHHHHhhh-cCcchhhhhcCccccHHHHH-HHHHHHhhhhcccccccccC-CCCCCCCCcCccccchHHHHH
Q 002122 623 EDVCSEIRMLESALEF-NRTDADVERFGKIDTKNQAM-DFIHEIGWLFHRSQSKSRLG-HLDPNTDLFPLRRFKWLIEFS 699 (964)
Q Consensus 623 ~~iCsEI~~LE~~le~-~a~~~~~~e~g~~~~h~~al-~fL~EIGWLLqr~~~~~~~~-~~d~~l~l~ql~R~k~lL~fA 699 (964)
+..=+||+.++.+++. +.+..+.+..|-+.+|=+|+ +-|..+.+|+.++......+ .. ..+|||+|
T Consensus 51 A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l-----------~stPLHWA 119 (600)
T KOG0509|consen 51 ATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVL-----------GSTPLHWA 119 (600)
T ss_pred HhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCC-----------CCCcchHH
Confidence 3444999999999998 77777666788899999997 77888899999998666544 22 26799999
Q ss_pred HHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccc
Q 002122 700 MDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKG 779 (964)
Q Consensus 700 ve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~ 779 (964)
+.+|+..+|..||+++++.+. .+.+|.++||.||..++..+|-+||.. |+
T Consensus 120 ar~G~~~vv~lLlqhGAdpt~---------~D~~G~~~lHla~~~~~~~~vayll~~-------~~-------------- 169 (600)
T KOG0509|consen 120 ARNGHISVVDLLLQHGADPTL---------KDKQGLTPLHLAAQFGHTALVAYLLSK-------GA-------------- 169 (600)
T ss_pred HHcCcHHHHHHHHHcCCCCce---------ecCCCCcHHHHHHHhCchHHHHHHHHh-------cc--------------
Confidence 999999999999997765332 477899999999999999999999998 76
Q ss_pred cccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCC-CCCCCHHHHHHHcCCHHHHHHHHHhhhcC-
Q 002122 780 FLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARD-SSGSTPEDYARLRGHYSYIHLVQKKINKR- 857 (964)
Q Consensus 780 y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD-~~G~TPLh~A~~rGh~svv~LL~~k~ak~- 857 (964)
++|.+|.+|+||||+||. +|+...+..||.. ++.++.+| ..|.||||+|+.+||...+.+|++-+++-
T Consensus 170 ---d~d~~D~~grTpLmwAay-kg~~~~v~~LL~f------~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d 239 (600)
T KOG0509|consen 170 ---DIDLRDNNGRTPLMWAAY-KGFALFVRRLLKF------GASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLD 239 (600)
T ss_pred ---cCCCcCCCCCCHHHHHHH-hcccHHHHHHHHh------cccccccccccCCchHHHHHhcCCcceEehhhhcCCccc
Confidence 899999999999999999 8888879999999 99999998 89999999999999999999666554432
Q ss_pred --CCCCCceeecCCCC
Q 002122 858 --PNGGHVVVDICGVV 871 (964)
Q Consensus 858 --~~~~~v~v~ip~~~ 871 (964)
..++++..+++.+.
T Consensus 240 ~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 240 KTNTNGKTPFDLAQER 255 (600)
T ss_pred ccccCCCCHHHHHHHh
Confidence 22455666665443
|
|
| >PHA02874 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.6e-17 Score=185.47 Aligned_cols=189 Identities=16% Similarity=0.192 Sum_probs=151.0
Q ss_pred hhHHHHHHHHhhhcCcc-hhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcC
Q 002122 626 CSEIRMLESALEFNRTD-ADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHE 703 (964)
Q Consensus 626 CsEI~~LE~~le~~a~~-~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g 703 (964)
-+++..++.+++..... ...++.+.+++|.++ -+.+..+.||+.++......+ ....+||++|+..|
T Consensus 11 ~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~-----------~~~~t~L~~A~~~~ 79 (434)
T PHA02874 11 SGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHIN-----------TKIPHPLLTAIKIG 79 (434)
T ss_pred cCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-----------CCCCCHHHHHHHcC
Confidence 35667777777644432 222456789999998 588888999998774322211 12467999999999
Q ss_pred chHHHHHHhhhhccCccc---------------CCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcc
Q 002122 704 WCAVVKKLLHILLDGTVS---------------LGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSE 768 (964)
Q Consensus 704 ~~aVVk~LL~~l~d~~vd---------------~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~ 768 (964)
+.+++++|++.+++.... .|.. ....+..|.||||+|++.|+.++|++|+++ |+
T Consensus 80 ~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d-~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~-------ga--- 148 (434)
T PHA02874 80 AHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGID-VNIKDAELKTFLHYAIKKGDLESIKMLFEY-------GA--- 148 (434)
T ss_pred CHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCC-CCCCCCCCccHHHHHHHCCCHHHHHHHHhC-------CC---
Confidence 999999999876543210 1111 111345688999999999999999999999 77
Q ss_pred ccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHH
Q 002122 769 NKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIH 848 (964)
Q Consensus 769 ~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~ 848 (964)
++|.+|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.++++
T Consensus 149 --------------d~n~~d~~g~tpLh~A~~-~~~~~iv~~Ll~~------g~~~n~~~~~g~tpL~~A~~~g~~~iv~ 207 (434)
T PHA02874 149 --------------DVNIEDDNGCYPIHIAIK-HNFFDIIKLLLEK------GAYANVKDNNGESPLHNAAEYGDYACIK 207 (434)
T ss_pred --------------CCCCcCCCCCCHHHHHHH-CCcHHHHHHHHHC------CCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 889999999999999999 9999999999999 9999999999999999999999999999
Q ss_pred HHHHhhhcC
Q 002122 849 LVQKKINKR 857 (964)
Q Consensus 849 LL~~k~ak~ 857 (964)
+|.+++++.
T Consensus 208 ~Ll~~g~~i 216 (434)
T PHA02874 208 LLIDHGNHI 216 (434)
T ss_pred HHHhCCCCC
Confidence 999988753
|
|
| >PHA02878 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.8e-17 Score=191.24 Aligned_cols=198 Identities=15% Similarity=0.129 Sum_probs=153.7
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHHH-HHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQAM-DFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~al-~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
.+.|++.|. .++.+..++.+++.|+.....+..|.+++|.+|. +....+.++++....... .-.
T Consensus 37 ~~tPLh~A~--~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~-------------~~~ 101 (477)
T PHA02878 37 PFIPLHQAV--EARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV-------------FYT 101 (477)
T ss_pred CcchHHHHH--HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhcccc-------------ccc
Confidence 366777754 4588889999999988766566789999999994 677777777765421100 012
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCccc-------------------------CCCCCchhhccC-CCcHHHHHHHcCC
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVS-------------------------LGEHPSLDLALT-ELGLLHRAVRKNS 746 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd-------------------------~g~~~~le~~l~-G~TpLH~AVr~g~ 746 (964)
.++|+.|+..++.++++.||....+.... .|.... ..+.. |.||||+|+..|+
T Consensus 102 ~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin-~~~~~~g~tpLh~A~~~~~ 180 (477)
T PHA02878 102 LVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADIN-MKDRHKGNTALHYATENKD 180 (477)
T ss_pred hhhHHHHHHcCCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCC-ccCCCCCCCHHHHHHhCCC
Confidence 45889999999999988888653221100 111111 12334 8999999999999
Q ss_pred HHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCcccccccc
Q 002122 747 RPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNA 826 (964)
Q Consensus 747 ~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdina 826 (964)
.++|++||++ |+ ++|..|..|.||||+|+. .|+.+++++|+++ |++++.
T Consensus 181 ~~iv~~Ll~~-------ga-----------------d~n~~d~~g~tpLh~A~~-~~~~~iv~~Ll~~------ga~in~ 229 (477)
T PHA02878 181 QRLTELLLSY-------GA-----------------NVNIPDKTNNSPLHHAVK-HYNKPIVHILLEN------GASTDA 229 (477)
T ss_pred HHHHHHHHHC-------CC-----------------CCCCcCCCCCCHHHHHHH-hCCHHHHHHHHHc------CCCCCC
Confidence 9999999999 87 889999999999999999 9999999999999 999999
Q ss_pred CCCCCCCHHHHHHHc-CCHHHHHHHHHhhhcCC
Q 002122 827 RDSSGSTPEDYARLR-GHYSYIHLVQKKINKRP 858 (964)
Q Consensus 827 rD~~G~TPLh~A~~r-Gh~svv~LL~~k~ak~~ 858 (964)
+|..|.||||+|+.+ ++.+++++|.+++++..
T Consensus 230 ~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn 262 (477)
T PHA02878 230 RDKCGNTPLHISVGYCKDYDILKLLLEHGVDVN 262 (477)
T ss_pred CCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCC
Confidence 999999999999976 78999999999987653
|
|
| >PHA02874 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.8e-17 Score=184.67 Aligned_cols=207 Identities=19% Similarity=0.134 Sum_probs=143.3
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCC-----------CC
Q 002122 615 FFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHL-----------DP 682 (964)
Q Consensus 615 ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~-----------d~ 682 (964)
..|++.|... +.+..++.+++.|+.....+..+.++++.++ .+.+.-+.||++++......... +.
T Consensus 36 ~tpL~~A~~~--g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~ 113 (434)
T PHA02874 36 TTPLIDAIRS--GDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDC 113 (434)
T ss_pred CCHHHHHHHc--CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHC
Confidence 5788876654 7888889999999876655667889999988 57788888888776422110000 00
Q ss_pred CCC-CcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCcc
Q 002122 683 NTD-LFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEV 761 (964)
Q Consensus 683 ~l~-l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~ 761 (964)
..+ ........++||+|+..|+.++|+.|++.+++.+ ..+..|.||||+|++.++.+++++|++.
T Consensus 114 g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n---------~~d~~g~tpLh~A~~~~~~~iv~~Ll~~----- 179 (434)
T PHA02874 114 GIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVN---------IEDDNGCYPIHIAIKHNFFDIIKLLLEK----- 179 (434)
T ss_pred cCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCC---------CcCCCCCCHHHHHHHCCcHHHHHHHHHC-----
Confidence 000 0122346789999999999999999999654321 1345688999999999999999999998
Q ss_pred ccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCC------c----------------
Q 002122 762 SDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMV------G---------------- 819 (964)
Q Consensus 762 ~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~v------g---------------- 819 (964)
|+ ++|..+..|.||||+|+. .|+.+++++|+++...+ |
T Consensus 180 --g~-----------------~~n~~~~~g~tpL~~A~~-~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~~~i~ 239 (434)
T PHA02874 180 --GA-----------------YANVKDNNGESPLHNAAE-YGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIE 239 (434)
T ss_pred --CC-----------------CCCCCCCCCCCHHHHHHH-cCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCChHHHH
Confidence 65 566666677777777777 67777777776651110 0
Q ss_pred ---cccccccCCCCCCCHHHHHHHcC-CHHHHHHHHHhhhcC
Q 002122 820 ---IEAWKNARDSSGSTPEDYARLRG-HYSYIHLVQKKINKR 857 (964)
Q Consensus 820 ---~gAdinarD~~G~TPLh~A~~rG-h~svv~LL~~k~ak~ 857 (964)
.+++++.+|..|.||||+|+..+ +.+++++|..++++.
T Consensus 240 ~Ll~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~ 281 (434)
T PHA02874 240 LLINNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADI 281 (434)
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCC
Confidence 03556667777777778777764 677888777776643
|
|
| >PHA03100 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.6e-17 Score=186.30 Aligned_cols=193 Identities=16% Similarity=0.117 Sum_probs=154.3
Q ss_pred CCcceeecc---hhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH--H-HHHHHHhhhhcccccccccCCCCCCCCCc
Q 002122 614 TFFPFIVAE---EDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA--M-DFIHEIGWLFHRSQSKSRLGHLDPNTDLF 687 (964)
Q Consensus 614 ~ffP~LVad---~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a--l-~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ 687 (964)
...|++++. +.....+..++.+++.++.....+..|.+++|.++ . +.+..+.+|++++......
T Consensus 68 ~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~---------- 137 (480)
T PHA03100 68 NSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIK---------- 137 (480)
T ss_pred CcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCcc----------
Confidence 356666611 33346777788888888877555667888999888 4 6777777888776422111
Q ss_pred CccccchHHHHHHHcC--chHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCcccccc
Q 002122 688 PLRRFKWLIEFSMDHE--WCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRL 765 (964)
Q Consensus 688 ql~R~k~lL~fAve~g--~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa 765 (964)
.....++||+|+..+ +.++++.|++.+++.+. .+..|.||||+|++.|+.++|++|+++ |+
T Consensus 138 -~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~---------~d~~g~tpL~~A~~~~~~~iv~~Ll~~-------ga 200 (480)
T PHA03100 138 -NSDGENLLHLYLESNKIDLKILKLLIDKGVDINA---------KNRYGYTPLHIAVEKGNIDVIKFLLDN-------GA 200 (480)
T ss_pred -CCCCCcHHHHHHHcCCChHHHHHHHHHCCCCccc---------ccCCCCCHHHHHHHhCCHHHHHHHHHc-------CC
Confidence 123578999999999 99999999986543211 233688999999999999999999999 77
Q ss_pred CccccccccccccccccCCCcCCCCC------ChHHHHHHhhCCC--HHHHHHhhcCCCCCccccccccCCCCCCCHHHH
Q 002122 766 GSENKALVDGVHKGFLFRPDVIGPAG------LTPIHIAAGKDGS--EDVLDALTDDPGMVGIEAWKNARDSSGSTPEDY 837 (964)
Q Consensus 766 ~~~~~~lv~~a~~~y~fdpn~~d~~G------~TPLHiAA~~~G~--~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~ 837 (964)
+++..+..| .||||+|+. .|+ .+++++|+++ |+++|.+|..|.||||+
T Consensus 201 -----------------~~~~~~~~~~~~~~~~t~l~~a~~-~~~~~~~iv~~Ll~~------g~din~~d~~g~TpL~~ 256 (480)
T PHA03100 201 -----------------DINAGDIETLLFTIFETPLHIAAC-YNEITLEVVNYLLSY------GVPINIKDVYGFTPLHY 256 (480)
T ss_pred -----------------CccCCCCCCCcHHHHHhHHHHHHH-hCcCcHHHHHHHHHc------CCCCCCCCCCCCCHHHH
Confidence 788888888 999999999 999 9999999999 99999999999999999
Q ss_pred HHHcCCHHHHHHHHHhhhcC
Q 002122 838 ARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 838 A~~rGh~svv~LL~~k~ak~ 857 (964)
|+.+|+.+++++|.+++++.
T Consensus 257 A~~~~~~~iv~~Ll~~gad~ 276 (480)
T PHA03100 257 AVYNNNPEFVKYLLDLGANP 276 (480)
T ss_pred HHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999998854
|
|
| >PHA02791 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.1e-16 Score=175.08 Aligned_cols=158 Identities=15% Similarity=0.079 Sum_probs=128.7
Q ss_pred hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC
Q 002122 646 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE 724 (964)
Q Consensus 646 ~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~ 724 (964)
+..|.+++|.++ -+.+..+..|++.+...... ...+|||+|+..|+.++|+.|++.+++.+
T Consensus 27 D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~-------------d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn----- 88 (284)
T PHA02791 27 DVHGHSALYYAIADNNVRLVCTLLNAGALKNLL-------------ENEFPLHQAATLEDTKIVKILLFSGMDDS----- 88 (284)
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCC-------------CCCCHHHHHHHCCCHHHHHHHHHCCCCCC-----
Confidence 457899999999 47777778888776421111 13689999999999999999998654321
Q ss_pred CCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCC-hHHHHHHhhCC
Q 002122 725 HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGL-TPIHIAAGKDG 803 (964)
Q Consensus 725 ~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~-TPLHiAA~~~G 803 (964)
..+..|.||||+|+..|+.++|++|+++ |+ ++|..+..|. ||||+||. .|
T Consensus 89 ----~~d~~G~TpLh~Aa~~g~~eivk~Ll~~-------ga-----------------din~~~~~g~~TpL~~Aa~-~g 139 (284)
T PHA02791 89 ----QFDDKGNTALYYAVDSGNMQTVKLFVKK-------NW-----------------RLMFYGKTGWKTSFYHAVM-LN 139 (284)
T ss_pred ----CCCCCCCCHHHHHHHcCCHHHHHHHHHC-------CC-----------------CcCccCCCCCcHHHHHHHH-cC
Confidence 1355699999999999999999999999 77 7788888884 99999999 99
Q ss_pred CHHHHHHhhcCCCCCccccccccCC-CCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 804 SEDVLDALTDDPGMVGIEAWKNARD-SSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 804 ~~dVV~lLL~~p~~vg~gAdinarD-~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
+.++|++|+++ +++. .| ..|.||||+|+.+||.+++++|.+++++..
T Consensus 140 ~~eivk~LL~~------~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n 187 (284)
T PHA02791 140 DVSIVSYFLSE------IPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTSTN 187 (284)
T ss_pred CHHHHHHHHhc------CCcc--cccccCccHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 99999999998 4432 34 358999999999999999999999988644
|
|
| >PHA03095 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.8e-17 Score=183.71 Aligned_cols=192 Identities=17% Similarity=0.103 Sum_probs=152.9
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHHH---HHHHHHhhhhcccccccccCCCCCCCCCcCcc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQAM---DFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLR 690 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~al---~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~ 690 (964)
+..|+++|..........++.+++.+++....+..|.+++|..+. ..+..+.+|+.++...... -.
T Consensus 117 g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~-----------d~ 185 (471)
T PHA03095 117 GRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAV-----------DD 185 (471)
T ss_pred CCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCccc-----------CC
Confidence 468888887555566778888888888777667788999987763 2355566777766321111 12
Q ss_pred ccchHHHHHHHc--CchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCH--HHHHHHhccCCCccccccC
Q 002122 691 RFKWLIEFSMDH--EWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSR--PLVDLLLRFVPLEVSDRLG 766 (964)
Q Consensus 691 R~k~lL~fAve~--g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~--e~VelLL~~~p~~~~dGa~ 766 (964)
...++||+|+.. +...+++.|++.+++.+ ..+..|.||||+|+..++. .++++|+.. |+
T Consensus 186 ~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~---------~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~-------g~- 248 (471)
T PHA03095 186 RFRSLLHHHLQSFKPRARIVRELIRAGCDPA---------ATDMLGNTPLHSMATGSSCKRSLVLPLLIA-------GI- 248 (471)
T ss_pred CCCCHHHHHHHHCCCcHHHHHHHHHcCCCCc---------ccCCCCCCHHHHHHhcCCchHHHHHHHHHc-------CC-
Confidence 457899998864 78899999998654322 1356789999999999874 678888888 77
Q ss_pred ccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHH
Q 002122 767 SENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSY 846 (964)
Q Consensus 767 ~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~sv 846 (964)
++|.+|..|.||||+|+. .|+.+++++|++. ||+++.+|.+|.||||+|+.+||.++
T Consensus 249 ----------------din~~d~~g~TpLh~A~~-~~~~~~v~~LL~~------gad~n~~~~~g~tpl~~A~~~~~~~~ 305 (471)
T PHA03095 249 ----------------SINARNRYGQTPLHYAAV-FNNPRACRRLIAL------GADINAVSSDGNTPLSLMVRNNNGRA 305 (471)
T ss_pred ----------------CCCCcCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCcccCCCCCCHHHHHHHhCCHHH
Confidence 899999999999999999 9999999999999 99999999999999999999999999
Q ss_pred HHHHHHhhhc
Q 002122 847 IHLVQKKINK 856 (964)
Q Consensus 847 v~LL~~k~ak 856 (964)
+++|.++...
T Consensus 306 v~~LL~~~~~ 315 (471)
T PHA03095 306 VRAALAKNPS 315 (471)
T ss_pred HHHHHHhCCC
Confidence 9999887654
|
|
| >PHA02859 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.1e-16 Score=166.79 Aligned_cols=171 Identities=10% Similarity=-0.031 Sum_probs=133.5
Q ss_pred hhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcC--chHHHHHHh
Q 002122 636 LEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHE--WCAVVKKLL 712 (964)
Q Consensus 636 le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g--~~aVVk~LL 712 (964)
.++-.+.+...++.-++++.++ .+.+..+..|+..... .+ ....+|||+|+.++ +.+++++||
T Consensus 8 ~~~~~~~~~~~~~~~~pL~~A~~~~~~~~vk~Li~~~n~---~~-----------~~g~TpLh~a~~~~~~~~eiv~~Ll 73 (209)
T PHA02859 8 YDYNDFTDYLFYRYCNPLFYYVEKDDIEGVKKWIKFVND---CN-----------DLYETPIFSCLEKDKVNVEILKFLI 73 (209)
T ss_pred cccchhHHHHhhccCcHHHHHHHhCcHHHHHHHHHhhhc---cC-----------ccCCCHHHHHHHcCCCCHHHHHHHH
Confidence 3444444444566778899988 6888888777754321 11 23478999999865 899999999
Q ss_pred hhhccCcccCCCCCchhhccCCCcHHHHHHHc---CCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCC
Q 002122 713 HILLDGTVSLGEHPSLDLALTELGLLHRAVRK---NSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGP 789 (964)
Q Consensus 713 ~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~---g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~ 789 (964)
+.+++.+. . ....|.||||+|+.. ++.+++++|+++ |+ ++|.+|.
T Consensus 74 ~~gadvn~----~----~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~-------ga-----------------din~~d~ 121 (209)
T PHA02859 74 ENGADVNF----K----TRDNNLSALHHYLSFNKNVEPEILKILIDS-------GS-----------------SITEEDE 121 (209)
T ss_pred HCCCCCCc----c----CCCCCCCHHHHHHHhCccccHHHHHHHHHC-------CC-----------------CCCCcCC
Confidence 96543221 0 123588999998864 479999999999 88 8999999
Q ss_pred CCChHHHHHHh-hCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHH-HHHcCCHHHHHHHHHhhhcCC
Q 002122 790 AGLTPIHIAAG-KDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDY-ARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 790 ~G~TPLHiAA~-~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~-A~~rGh~svv~LL~~k~ak~~ 858 (964)
.|.||||+|+. ..++.+++++|+++ |++++.+|..|.||||. |+..++.+++++|.+++++..
T Consensus 122 ~G~TpLh~a~~~~~~~~~iv~~Li~~------gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~ 186 (209)
T PHA02859 122 DGKNLLHMYMCNFNVRINVIKLLIDS------GVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDIN 186 (209)
T ss_pred CCCCHHHHHHHhccCCHHHHHHHHHc------CCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCC
Confidence 99999999875 25789999999999 99999999999999995 667899999999999887543
|
|
| >PHA02741 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.1e-16 Score=158.88 Aligned_cols=133 Identities=11% Similarity=0.105 Sum_probs=110.6
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCC----HHHHHHHhccCCCccccccCc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNS----RPLVDLLLRFVPLEVSDRLGS 767 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~----~e~VelLL~~~p~~~~dGa~~ 767 (964)
.+++||+|+..|+.++|+.|+...... ..+.. ....+..|.||||+|+..|+ .+++++|+.+ |+
T Consensus 21 g~t~Lh~Aa~~g~~~~v~~l~~~~~~~--~~ga~-in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~-------ga-- 88 (169)
T PHA02741 21 GENFFHEAARCGCFDIIARFTPFIRGD--CHAAA-LNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIEL-------GA-- 88 (169)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHHhccc--hhhhh-hhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHc-------CC--
Confidence 478999999999999999997643100 01111 11235568999999999998 5889999998 77
Q ss_pred cccccccccccccccCCCcCCC-CCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHH
Q 002122 768 ENKALVDGVHKGFLFRPDVIGP-AGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSY 846 (964)
Q Consensus 768 ~~~~lv~~a~~~y~fdpn~~d~-~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~sv 846 (964)
++|.++. .|.||||+|+. .++.+++++|++.+ +++++.+|..|.||||+|...|+.++
T Consensus 89 ---------------din~~~~~~g~TpLh~A~~-~~~~~iv~~Ll~~~-----g~~~~~~n~~g~tpL~~A~~~~~~~i 147 (169)
T PHA02741 89 ---------------DINAQEMLEGDTALHLAAH-RRDHDLAEWLCCQP-----GIDLHFCNADNKSPFELAIDNEDVAM 147 (169)
T ss_pred ---------------CCCCCCcCCCCCHHHHHHH-cCCHHHHHHHHhCC-----CCCCCcCCCCCCCHHHHHHHCCCHHH
Confidence 7888885 89999999999 99999999999743 89999999999999999999999999
Q ss_pred HHHHHHhhhcC
Q 002122 847 IHLVQKKINKR 857 (964)
Q Consensus 847 v~LL~~k~ak~ 857 (964)
+++|+++.+..
T Consensus 148 v~~L~~~~~~~ 158 (169)
T PHA02741 148 MQILREIVATS 158 (169)
T ss_pred HHHHHHHHHHh
Confidence 99999987654
|
|
| >PHA02946 ankyin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.7e-16 Score=181.39 Aligned_cols=195 Identities=12% Similarity=0.122 Sum_probs=107.4
Q ss_pred HHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcC--ch
Q 002122 629 IRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHE--WC 705 (964)
Q Consensus 629 I~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g--~~ 705 (964)
.+.++.+++.|++....+..|.+++|.+| .+....+.+|+.++......+ ...++|||+|+..+ ..
T Consensus 52 ~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d-----------~~g~TpLh~A~~~~~~~~ 120 (446)
T PHA02946 52 ERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACD-----------KQHKTPLYYLSGTDDEVI 120 (446)
T ss_pred HHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCC-----------CCCCCHHHHHHHcCCchH
Confidence 34455555555554444455666666666 355555666666553222111 12355666665543 35
Q ss_pred HHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCc------ccccccccc--c
Q 002122 706 AVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGS------ENKALVDGV--H 777 (964)
Q Consensus 706 aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~------~~~~lv~~a--~ 777 (964)
+++++|++.+++.+. ..+..|.|||| |+..++.+++++|++. |++. ++++++... .
T Consensus 121 e~v~lLl~~Gadin~--------~~d~~g~tpL~-aa~~~~~~vv~~Ll~~-------gad~~~~d~~G~t~Lh~A~~~~ 184 (446)
T PHA02946 121 ERINLLVQYGAKINN--------SVDEEGCGPLL-ACTDPSERVFKKIMSI-------GFEARIVDKFGKNHIHRHLMSD 184 (446)
T ss_pred HHHHHHHHcCCCccc--------ccCCCCCcHHH-HHHCCChHHHHHHHhc-------cccccccCCCCCCHHHHHHHhc
Confidence 566666654432210 01223444444 3333444444444444 2200 001111100 0
Q ss_pred c----------ccccCCCcCCCCCChHHHHHHhhCC--CHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCC-H
Q 002122 778 K----------GFLFRPDVIGPAGLTPIHIAAGKDG--SEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGH-Y 844 (964)
Q Consensus 778 ~----------~y~fdpn~~d~~G~TPLHiAA~~~G--~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh-~ 844 (964)
. ....++|.+|..|.||||+||. .| +.+++++|+ . ++++|++|..|.||||+|+..++ .
T Consensus 185 ~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~-~~~~~~~iv~lLl-~------gadin~~d~~G~TpLh~A~~~~~~~ 256 (446)
T PHA02946 185 NPKASTISWMMKLGISPSKPDHDGNTPLHIVCS-KTVKNVDIINLLL-P------STDVNKQNKFGDSPLTLLIKTLSPA 256 (446)
T ss_pred CCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHH-cCCCcHHHHHHHH-c------CCCCCCCCCCCCCHHHHHHHhCChH
Confidence 0 0012778888888888888887 54 678888877 4 68888888888888888888877 4
Q ss_pred HHHHHHHHhhhcCC
Q 002122 845 SYIHLVQKKINKRP 858 (964)
Q Consensus 845 svv~LL~~k~ak~~ 858 (964)
+++++|..+++...
T Consensus 257 ~~~~~Ll~~g~~~~ 270 (446)
T PHA02946 257 HLINKLLSTSNVIT 270 (446)
T ss_pred HHHHHHHhCCCCCC
Confidence 78888888776543
|
|
| >PHA02798 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=6.2e-16 Score=179.30 Aligned_cols=210 Identities=11% Similarity=0.073 Sum_probs=157.0
Q ss_pred CCcceeecch---hhhhHHHHHHHHhhhcCcchhhhhcCccccHHHHH----HHHHHHhhhhcccccccccCCCCCCCCC
Q 002122 614 TFFPFIVAEE---DVCSEIRMLESALEFNRTDADVERFGKIDTKNQAM----DFIHEIGWLFHRSQSKSRLGHLDPNTDL 686 (964)
Q Consensus 614 ~ffP~LVad~---~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~al----~fL~EIGWLLqr~~~~~~~~~~d~~l~l 686 (964)
+.+|++.+.. ..-..++.++-+++.|++....+..|.+++|.++. +.+..+.+|+.++......+
T Consensus 71 g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d-------- 142 (489)
T PHA02798 71 YSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLD-------- 142 (489)
T ss_pred CCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccC--------
Confidence 4677765432 12245788999999999876667789999999885 25677888888775433333
Q ss_pred cCccccchHHHHHHHcCc---hHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcC----CHHHHHHHhccCCC
Q 002122 687 FPLRRFKWLIEFSMDHEW---CAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKN----SRPLVDLLLRFVPL 759 (964)
Q Consensus 687 ~ql~R~k~lL~fAve~g~---~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g----~~e~VelLL~~~p~ 759 (964)
....+|||+|+..++ .+++++||+.+++.+. ..+..|.||||.|++.+ +.+++++|+++
T Consensus 143 ---~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~--------~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~--- 208 (489)
T PHA02798 143 ---KDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINT--------HNNKEKYDTLHCYFKYNIDRIDADILKLFVDN--- 208 (489)
T ss_pred ---CCCCcHHHHHHHcCCcchHHHHHHHHHhCCCccc--------ccCcCCCcHHHHHHHhccccCCHHHHHHHHHC---
Confidence 234789999999988 9999999996543221 11345789999998754 79999999998
Q ss_pred ccccccCccc------ccccc------cccccc----------ccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCC
Q 002122 760 EVSDRLGSEN------KALVD------GVHKGF----------LFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGM 817 (964)
Q Consensus 760 ~~~dGa~~~~------~~lv~------~a~~~y----------~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~ 817 (964)
|+.... +++.. .....+ ..++|.+|..|.||||+||. .|+.+++++|++.
T Consensus 209 ----Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~-~~~~~~v~~LL~~--- 280 (489)
T PHA02798 209 ----GFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVS-HNNRKIFEYLLQL--- 280 (489)
T ss_pred ----CCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHH-cCcHHHHHHHHHc---
Confidence 442221 11110 000000 14789999999999999999 9999999999999
Q ss_pred CccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhc
Q 002122 818 VGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINK 856 (964)
Q Consensus 818 vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak 856 (964)
||++|++|..|.||||+|+.+|+.++++.|.++..+
T Consensus 281 ---GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~ 316 (489)
T PHA02798 281 ---GGDINIITELGNTCLFTAFENESKFIFNSILNKKPN 316 (489)
T ss_pred ---CCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCC
Confidence 999999999999999999999999999998877544
|
|
| >PHA02946 ankyin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.6e-16 Score=179.44 Aligned_cols=191 Identities=14% Similarity=0.110 Sum_probs=116.6
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHHH---HHHHHHhhhhcccccccccCCCCCCCCCcCcc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQAM---DFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLR 690 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~al---~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~ 690 (964)
+.+|+++|... +....++.+++.|+.....+..|.+++|.++. +.+..+..|++++...... ...
T Consensus 72 G~TpLh~Aa~~--g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~----------~d~ 139 (446)
T PHA02946 72 GNYPLHIASKI--NNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNS----------VDE 139 (446)
T ss_pred CCCHHHHHHHc--CCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccc----------cCC
Confidence 46788877655 44555667777777655555677888886652 1244455666655322110 001
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCccc---------------------------CCCCCchhhccCCCcHHHHHHH
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVS---------------------------LGEHPSLDLALTELGLLHRAVR 743 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd---------------------------~g~~~~le~~l~G~TpLH~AVr 743 (964)
...+||+ |+..++.++++.|++.+++.... .|. +....+..|.||||+|+.
T Consensus 140 ~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Ga-din~~d~~G~TpLH~Aa~ 217 (446)
T PHA02946 140 EGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGI-SPSKPDHDGNTPLHIVCS 217 (446)
T ss_pred CCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCC-CCcccCCCCCCHHHHHHH
Confidence 1234453 34445555555555543321100 000 000123446666666666
Q ss_pred cC--CHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCC-HHHHHHhhcCCCCCcc
Q 002122 744 KN--SRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS-EDVLDALTDDPGMVGI 820 (964)
Q Consensus 744 ~g--~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~-~dVV~lLL~~p~~vg~ 820 (964)
++ +.+++++|+ . |+ ++|.+|..|.||||+|+. .++ .+++++|+++
T Consensus 218 ~~~~~~~iv~lLl-~-------ga-----------------din~~d~~G~TpLh~A~~-~~~~~~~~~~Ll~~------ 265 (446)
T PHA02946 218 KTVKNVDIINLLL-P-------ST-----------------DVNKQNKFGDSPLTLLIK-TLSPAHLINKLLST------ 265 (446)
T ss_pred cCCCcHHHHHHHH-c-------CC-----------------CCCCCCCCCCCHHHHHHH-hCChHHHHHHHHhC------
Confidence 54 556666665 2 23 789999999999999999 666 6899999999
Q ss_pred ccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhc
Q 002122 821 EAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINK 856 (964)
Q Consensus 821 gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak 856 (964)
++.++ +.| +++|+..++.+++++|..++++
T Consensus 266 g~~~~-----~~~-~~~a~~~~~~~~~e~l~~~g~~ 295 (446)
T PHA02946 266 SNVIT-----DQT-VNICIFYDRDDVLEIINDKGKQ 295 (446)
T ss_pred CCCCC-----CcH-HHHHHHcCchHHHHHHHHcCcc
Confidence 76543 444 8999999999999999988754
|
|
| >PHA03095 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=8.1e-16 Score=175.42 Aligned_cols=215 Identities=17% Similarity=0.032 Sum_probs=143.0
Q ss_pred Ccceeecchhh-hhHHHHHHHHhhhcCcchhhhhcCccccHHHHH-H-HHHHHhhhhcccccccccCCCCCCCCCcCccc
Q 002122 615 FFPFIVAEEDV-CSEIRMLESALEFNRTDADVERFGKIDTKNQAM-D-FIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRR 691 (964)
Q Consensus 615 ffP~LVad~~i-CsEI~~LE~~le~~a~~~~~~e~g~~~~h~~al-~-fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R 691 (964)
..|++++.... -...+.++.+++.|++....+..|.+++|.++. + ....+.+|++++......+. .
T Consensus 48 ~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~-----------~ 116 (471)
T PHA03095 48 KTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDK-----------V 116 (471)
T ss_pred CCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCC-----------C
Confidence 56776655442 225667777777777665555677888888774 4 45666677766643322221 1
Q ss_pred cchHHHHHH--HcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcC--CHHHHHHHhccCCCccccccCc
Q 002122 692 FKWLIEFSM--DHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKN--SRPLVDLLLRFVPLEVSDRLGS 767 (964)
Q Consensus 692 ~k~lL~fAv--e~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g--~~e~VelLL~~~p~~~~dGa~~ 767 (964)
.++|||+|+ ..++.++++.||+.+++.+ ..+..|.||||.|+..+ +.++|++|+++..+.... ...
T Consensus 117 g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~---------~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~-d~~ 186 (471)
T PHA03095 117 GRTPLHVYLSGFNINPKVIRLLLRKGADVN---------ALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAV-DDR 186 (471)
T ss_pred CCCHHHHHhhCCcCCHHHHHHHHHcCCCCC---------ccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCccc-CCC
Confidence 367888887 4456778888887544321 12344667777777654 567777777763221100 001
Q ss_pred cccccccccc--cc----------cccCCCcCCCCCChHHHHHHhhCCCH--HHHHHhhcCCCCCccccccccCCCCCCC
Q 002122 768 ENKALVDGVH--KG----------FLFRPDVIGPAGLTPIHIAAGKDGSE--DVLDALTDDPGMVGIEAWKNARDSSGST 833 (964)
Q Consensus 768 ~~~~lv~~a~--~~----------y~fdpn~~d~~G~TPLHiAA~~~G~~--dVV~lLL~~p~~vg~gAdinarD~~G~T 833 (964)
+.++++.... .. ...+|+.+|..|.||||+||. .|+. .++..|++. |+++|.+|..|.|
T Consensus 187 g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~-~~~~~~~~v~~ll~~------g~din~~d~~g~T 259 (471)
T PHA03095 187 FRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMAT-GSSCKRSLVLPLLIA------GISINARNRYGQT 259 (471)
T ss_pred CCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHh-cCCchHHHHHHHHHc------CCCCCCcCCCCCC
Confidence 1223322110 00 114889999999999999999 7764 688899999 9999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 834 PEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 834 PLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
|||+|+..|+.+++++|.+++++.
T Consensus 260 pLh~A~~~~~~~~v~~LL~~gad~ 283 (471)
T PHA03095 260 PLHYAAVFNNPRACRRLIALGADI 283 (471)
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999998864
|
|
| >PHA02989 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.1e-15 Score=177.53 Aligned_cols=194 Identities=14% Similarity=0.096 Sum_probs=146.3
Q ss_pred HHHHHHHHhhhcCcchhhhhcCccccHHHHH----HHHHHHhhhhcccccc-cccCCCCCCCCCcCccccchHHHHHHHc
Q 002122 628 EIRMLESALEFNRTDADVERFGKIDTKNQAM----DFIHEIGWLFHRSQSK-SRLGHLDPNTDLFPLRRFKWLIEFSMDH 702 (964)
Q Consensus 628 EI~~LE~~le~~a~~~~~~e~g~~~~h~~al----~fL~EIGWLLqr~~~~-~~~~~~d~~l~l~ql~R~k~lL~fAve~ 702 (964)
..+.++.+++.|++....+..|.+++|.++. +.+..+.+|++++... ...+ ....+|||+|+..
T Consensus 87 ~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d-----------~~g~tpLh~a~~~ 155 (494)
T PHA02989 87 IKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKN-----------SRGYNLLHMYLES 155 (494)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccC-----------CCCCCHHHHHHHh
Confidence 4567888999999876666778999987653 3566777888877532 2221 2357899999765
Q ss_pred --CchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcC----CHHHHHHHhccCCCccccccCccc------c
Q 002122 703 --EWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKN----SRPLVDLLLRFVPLEVSDRLGSEN------K 770 (964)
Q Consensus 703 --g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g----~~e~VelLL~~~p~~~~dGa~~~~------~ 770 (964)
++.++|+.||+.+++... ..+..|+||||.|++.+ +.++|++||+. |+..+. .
T Consensus 156 ~~~~~~iv~~Ll~~Gadi~~--------~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~-------Ga~vn~~~~~~~t 220 (494)
T PHA02989 156 FSVKKDVIKILLSFGVNLFE--------KTSLYGLTPMNIYLRNDIDVISIKVIKYLIKK-------GVNIETNNNGSES 220 (494)
T ss_pred ccCCHHHHHHHHHcCCCccc--------cccccCCChHHHHHhcccccccHHHHHHHHhC-------CCCccccCCcccc
Confidence 588999999997654221 12456899999998765 89999999998 443221 1
Q ss_pred ccccccc-------cc--------cccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHH
Q 002122 771 ALVDGVH-------KG--------FLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPE 835 (964)
Q Consensus 771 ~lv~~a~-------~~--------y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPL 835 (964)
++..... .. ...++|.+|..|+||||+||. .|+.+++++|++. ||++|++|..|.|||
T Consensus 221 ~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~-~~~~~~v~~LL~~------Gadin~~d~~G~TpL 293 (494)
T PHA02989 221 VLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAK-VDNYEAFNYLLKL------GDDIYNVSKDGDTVL 293 (494)
T ss_pred HHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHH-hcCHHHHHHHHHc------CCCccccCCCCCCHH
Confidence 2111000 00 014789999999999999999 9999999999999 999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhh
Q 002122 836 DYARLRGHYSYIHLVQKKI 854 (964)
Q Consensus 836 h~A~~rGh~svv~LL~~k~ 854 (964)
|+|+..|+.+++++|.+..
T Consensus 294 ~~A~~~~~~~iv~~LL~~~ 312 (494)
T PHA02989 294 TYAIKHGNIDMLNRILQLK 312 (494)
T ss_pred HHHHHcCCHHHHHHHHhcC
Confidence 9999999999999887653
|
|
| >PHA02876 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.6e-16 Score=185.24 Aligned_cols=191 Identities=16% Similarity=0.130 Sum_probs=120.2
Q ss_pred CCcceeecchhhhhHH-HHHHHHhhhcCcchhhhhcCccccHHHHH-HH-HHHHhhhhcccccccccCCCCCCCCCcCcc
Q 002122 614 TFFPFIVAEEDVCSEI-RMLESALEFNRTDADVERFGKIDTKNQAM-DF-IHEIGWLFHRSQSKSRLGHLDPNTDLFPLR 690 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI-~~LE~~le~~a~~~~~~e~g~~~~h~~al-~f-L~EIGWLLqr~~~~~~~~~~d~~l~l~ql~ 690 (964)
+..|++.|... ..+ ...+.+++.++.....+..|.+++|.++. ++ ...+..|+..+......+ .
T Consensus 273 g~TpLh~Aa~~--~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d-----------~ 339 (682)
T PHA02876 273 KNTPLHHASQA--PSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAAD-----------R 339 (682)
T ss_pred CCCHHHHHHhC--CCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcc-----------c
Confidence 36788776643 222 23455566666555445678888888873 42 444555555553222111 2
Q ss_pred ccchHHHHHHHc-CchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccc
Q 002122 691 RFKWLIEFSMDH-EWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSEN 769 (964)
Q Consensus 691 R~k~lL~fAve~-g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~ 769 (964)
...++||+|+.. ++.++++.|++.+++.+. .+..|.||||+|+.+|+.++|++||++ |+
T Consensus 340 ~g~TpLh~A~~~~~~~~iv~lLl~~gadin~---------~d~~G~TpLh~Aa~~~~~~iv~~Ll~~-------ga---- 399 (682)
T PHA02876 340 LYITPLHQASTLDRNKDIVITLLELGANVNA---------RDYCDKTPIHYAAVRNNVVIINTLLDY-------GA---- 399 (682)
T ss_pred CCCcHHHHHHHhCCcHHHHHHHHHcCCCCcc---------CCCCCCCHHHHHHHcCCHHHHHHHHHC-------CC----
Confidence 246788888875 467788888875443221 245588888888888888888888888 66
Q ss_pred cccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcC-CHHHHH
Q 002122 770 KALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRG-HYSYIH 848 (964)
Q Consensus 770 ~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rG-h~svv~ 848 (964)
+++..+..|.||||+|+...+...++++|+++ |+++|.+|..|.||||+|+..| +.++++
T Consensus 400 -------------d~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~------gadin~~d~~G~TpLh~Aa~~~~~~~iv~ 460 (682)
T PHA02876 400 -------------DIEALSQKIGTALHFALCGTNPYMSVKTLIDR------GANVNSKNKDLSTPLHYACKKNCKLDVIE 460 (682)
T ss_pred -------------CccccCCCCCchHHHHHHcCCHHHHHHHHHhC------CCCCCcCCCCCChHHHHHHHhCCcHHHHH
Confidence 55666666666666666523334556666666 6666666666666666666654 456666
Q ss_pred HHHHhhhc
Q 002122 849 LVQKKINK 856 (964)
Q Consensus 849 LL~~k~ak 856 (964)
+|.+++++
T Consensus 461 lLl~~Gad 468 (682)
T PHA02876 461 MLLDNGAD 468 (682)
T ss_pred HHHHCCCC
Confidence 66666654
|
|
| >PHA02859 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.1e-16 Score=160.25 Aligned_cols=177 Identities=13% Similarity=0.009 Sum_probs=134.7
Q ss_pred CCCCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHHH-H--HHHHHhhhhcccccccccCCCCCCCCCcC
Q 002122 612 SSTFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQAM-D--FIHEIGWLFHRSQSKSRLGHLDPNTDLFP 688 (964)
Q Consensus 612 ss~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~al-~--fL~EIGWLLqr~~~~~~~~~~d~~l~l~q 688 (964)
+..+.|++.|... ..+..++.+++... ..+..|.+++|.++. + .+..+.+||+++......+
T Consensus 19 ~~~~~pL~~A~~~--~~~~~vk~Li~~~n---~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~---------- 83 (209)
T PHA02859 19 YRYCNPLFYYVEK--DDIEGVKKWIKFVN---DCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKT---------- 83 (209)
T ss_pred hccCcHHHHHHHh--CcHHHHHHHHHhhh---ccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccC----------
Confidence 4558888887654 44445555555432 224568999999875 2 5777888888875322221
Q ss_pred ccccchHHHHHHHc---CchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHH--cCCHHHHHHHhccCCCcccc
Q 002122 689 LRRFKWLIEFSMDH---EWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVR--KNSRPLVDLLLRFVPLEVSD 763 (964)
Q Consensus 689 l~R~k~lL~fAve~---g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr--~g~~e~VelLL~~~p~~~~d 763 (964)
.....+|||+|+.. ++.+++++|++.+++.+. .+..|.||||.|++ .++.+++++||++
T Consensus 84 ~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~---------~d~~G~TpLh~a~~~~~~~~~iv~~Li~~------- 147 (209)
T PHA02859 84 RDNNLSALHHYLSFNKNVEPEILKILIDSGSSITE---------EDEDGKNLLHMYMCNFNVRINVIKLLIDS------- 147 (209)
T ss_pred CCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCC---------cCCCCCCHHHHHHHhccCCHHHHHHHHHc-------
Confidence 11347899998764 479999999996554221 35568999999987 4689999999999
Q ss_pred ccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcC
Q 002122 764 RLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRG 842 (964)
Q Consensus 764 Ga~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rG 842 (964)
|+ ++|.+|..|.||||.||...++.+++++|+++ |++++++|..|.||||+|..++
T Consensus 148 ga-----------------din~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~------Gadi~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 148 GV-----------------SFLNKDFDNNNILYSYILFHSDKKIFDFLTSL------GIDINETNKSGYNCYDLIKFRN 203 (209)
T ss_pred CC-----------------CcccccCCCCcHHHHHHHhcCCHHHHHHHHHc------CCCCCCCCCCCCCHHHHHhhhh
Confidence 87 89999999999999765448899999999999 9999999999999999999865
|
|
| >KOG0510 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.5e-16 Score=185.43 Aligned_cols=237 Identities=18% Similarity=0.110 Sum_probs=163.7
Q ss_pred CCCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhh-cccccccccCCCCCCCCCcCcc
Q 002122 613 STFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLF-HRSQSKSRLGHLDPNTDLFPLR 690 (964)
Q Consensus 613 s~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLL-qr~~~~~~~~~~d~~l~l~ql~ 690 (964)
+.++|+++|+-.--.|.+ ..+++.++...-.+..+-+++|+++ .+-..-+...| +++...... . -+-..
T Consensus 153 ~~~TpLh~A~~~~~~E~~--k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~--i-----n~~~n 223 (929)
T KOG0510|consen 153 NGFTPLHLAARKNKVEAK--KELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTH--I-----NFDNN 223 (929)
T ss_pred CCCchhhHHHhcChHHHH--HHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcc--c-----ccccC
Confidence 458999999965455533 3356667765544456677888887 22222222222 344321111 1 13334
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcc-cCCCC-----CchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTV-SLGEH-----PSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDR 764 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~v-d~g~~-----~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dG 764 (964)
..++|||.|++.|+.+.++.+|+.+..+.. ..+.. ...+.+.+|.||||+|+++|+.++|+.||....+..++.
T Consensus 224 ~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn 303 (929)
T KOG0510|consen 224 EKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKN 303 (929)
T ss_pred CCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccC
Confidence 568899999999999999999997764331 11110 012235678999999999999999999999954433322
Q ss_pred cCcccccccccccc------------ccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccc---cCCC
Q 002122 765 LGSENKALVDGVHK------------GFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKN---ARDS 829 (964)
Q Consensus 765 a~~~~~~lv~~a~~------------~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdin---arD~ 829 (964)
. .+..|++-++.- .=.+..|..|..|+||||+||. +||..|+++|++. ||..+ ..|+
T Consensus 304 ~-d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~-~gH~~v~qlLl~~------GA~~~~~~e~D~ 375 (929)
T KOG0510|consen 304 K-DEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAK-SGHDRVVQLLLNK------GALFLNMSEADS 375 (929)
T ss_pred C-CCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhh-cCHHHHHHHHHhc------Chhhhccccccc
Confidence 2 123455544332 1125567888999999999999 9999999999999 99887 5699
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhhhcCC---CCCCceee
Q 002122 830 SGSTPEDYARLRGHYSYIHLVQKKINKRP---NGGHVVVD 866 (964)
Q Consensus 830 ~G~TPLh~A~~rGh~svv~LL~~k~ak~~---~~~~v~v~ 866 (964)
+|.||||.|+++||.+.|++|...+++.. .++...++
T Consensus 376 dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~SA~~ 415 (929)
T KOG0510|consen 376 DGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKGKSAFD 415 (929)
T ss_pred CCchhhhHHHHhccHHHHHHHHHcCCceeecccccccccc
Confidence 99999999999999999999999998762 24445555
|
|
| >PHA02878 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.5e-16 Score=176.94 Aligned_cols=175 Identities=17% Similarity=0.079 Sum_probs=140.6
Q ss_pred HHHHHHHHhhhcCcchhhhhc-CccccHHHHH-HHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCch
Q 002122 628 EIRMLESALEFNRTDADVERF-GKIDTKNQAM-DFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWC 705 (964)
Q Consensus 628 EI~~LE~~le~~a~~~~~~e~-g~~~~h~~al-~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~ 705 (964)
+...++.+++.|+.....+.. |.+++|.+|. +.+..+.+|+.++......+ ....+|||+|+..++.
T Consensus 146 ~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d-----------~~g~tpLh~A~~~~~~ 214 (477)
T PHA02878 146 EAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPD-----------KTNNSPLHHAVKHYNK 214 (477)
T ss_pred HHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcC-----------CCCCCHHHHHHHhCCH
Confidence 445778888888876655555 9999999994 77788888888775322222 2357899999999999
Q ss_pred HHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHc-CCHHHHHHHhccCCCccccccCccccccccccccccccCC
Q 002122 706 AVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRK-NSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRP 784 (964)
Q Consensus 706 aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~-g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdp 784 (964)
++++.||+.+++.+. .+..|.||||+|+.+ ++.++|++||+. |+ ++
T Consensus 215 ~iv~~Ll~~ga~in~---------~d~~g~TpLh~A~~~~~~~~iv~~Ll~~-------ga-----------------dv 261 (477)
T PHA02878 215 PIVHILLENGASTDA---------RDKCGNTPLHISVGYCKDYDILKLLLEH-------GV-----------------DV 261 (477)
T ss_pred HHHHHHHHcCCCCCC---------CCCCCCCHHHHHHHhcCCHHHHHHHHHc-------CC-----------------CC
Confidence 999999996543221 345689999999976 689999999999 87 78
Q ss_pred CcCCC-CCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcC-CHHHHHHHHHhhh
Q 002122 785 DVIGP-AGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRG-HYSYIHLVQKKIN 855 (964)
Q Consensus 785 n~~d~-~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rG-h~svv~LL~~k~a 855 (964)
|..+. .|.||||+|+ ++.+++++|+++ ||++|++|..|.||||+|+..+ +.+++++|..++.
T Consensus 262 n~~~~~~g~TpLh~A~---~~~~~v~~Ll~~------gadin~~d~~g~TpL~~A~~~~~~~~~~~~li~~~~ 325 (477)
T PHA02878 262 NAKSYILGLTALHSSI---KSERKLKLLLEY------GADINSLNSYKLTPLSSAVKQYLCINIGRILISNIC 325 (477)
T ss_pred CccCCCCCCCHHHHHc---cCHHHHHHHHHC------CCCCCCcCCCCCCHHHHHHHHcCccchHHHHHHHHH
Confidence 88775 7999999994 568999999999 9999999999999999999754 5678888777653
|
|
| >PHA02743 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.5e-16 Score=154.20 Aligned_cols=130 Identities=11% Similarity=-0.032 Sum_probs=106.9
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHH---HHHHHhccCCCccccccCccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRP---LVDLLLRFVPLEVSDRLGSEN 769 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e---~VelLL~~~p~~~~dGa~~~~ 769 (964)
++.||.|+..|....++.+++.+.+..... ...+..|.||||+|+..|+.+ ++++|+.. |+
T Consensus 21 ~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~-----~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~-------Ga---- 84 (166)
T PHA02743 21 QNTFLRICRTGNIYELMEVAPFISGDGHLL-----HRYDHHGRQCTHMVAWYDRANAVMKIELLVNM-------GA---- 84 (166)
T ss_pred CcHHHHHHHcCCHHHHHHHHHHHhhcchhh-----hccCCCCCcHHHHHHHhCccCHHHHHHHHHHc-------CC----
Confidence 568999999999865555444333222111 113456899999999998765 48999999 87
Q ss_pred cccccccccccccCCCcCC-CCCChHHHHHHhhCCCHHHHHHhhc-CCCCCccccccccCCCCCCCHHHHHHHcCCHHHH
Q 002122 770 KALVDGVHKGFLFRPDVIG-PAGLTPIHIAAGKDGSEDVLDALTD-DPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYI 847 (964)
Q Consensus 770 ~~lv~~a~~~y~fdpn~~d-~~G~TPLHiAA~~~G~~dVV~lLL~-~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv 847 (964)
++|.++ ..|.||||+|+. .|+.+++++|++ . +++++.+|..|.||||+|+..++.+++
T Consensus 85 -------------din~~d~~~g~TpLh~A~~-~g~~~iv~~Ll~~~------gad~~~~d~~g~tpL~~A~~~~~~~iv 144 (166)
T PHA02743 85 -------------DINARELGTGNTLLHIAAS-TKNYELAEWLCRQL------GVNLGAINYQHETAYHIAYKMRDRRMM 144 (166)
T ss_pred -------------CCCCCCCCCCCcHHHHHHH-hCCHHHHHHHHhcc------CCCccCcCCCCCCHHHHHHHcCCHHHH
Confidence 889988 489999999999 999999999995 7 999999999999999999999999999
Q ss_pred HHHHHhhhcCC
Q 002122 848 HLVQKKINKRP 858 (964)
Q Consensus 848 ~LL~~k~ak~~ 858 (964)
++|..++++..
T Consensus 145 ~~Ll~~ga~~~ 155 (166)
T PHA02743 145 EILRANGAVCD 155 (166)
T ss_pred HHHHHcCCCCC
Confidence 99999988764
|
|
| >KOG0508 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.9e-16 Score=174.40 Aligned_cols=183 Identities=19% Similarity=0.141 Sum_probs=149.6
Q ss_pred CcceeecchhhhhHHHHHHHHhh-hcCcchhh--------hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCC
Q 002122 615 FFPFIVAEEDVCSEIRMLESALE-FNRTDADV--------ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNT 684 (964)
Q Consensus 615 ffP~LVad~~iCsEI~~LE~~le-~~a~~~~~--------~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l 684 (964)
-+|++|+... +..+..|.+++ .+++.++. .-.|.+++-.++ -++|..+.-|+.++..+....+.
T Consensus 43 ~tPL~iaaRn--GH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~T---- 116 (615)
T KOG0508|consen 43 GTPLLIAARN--GHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRT---- 116 (615)
T ss_pred CCceeeehhc--CcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCcccccccc----
Confidence 4999999977 44555677777 44443321 224666666665 69999999999998654443333
Q ss_pred CCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccc
Q 002122 685 DLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDR 764 (964)
Q Consensus 685 ~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dG 764 (964)
-.+||--||-.|+.++||+|+++.++..+ .+..|.|.||+|+.+|+.+|+++||+. |
T Consensus 117 -------NStPLraACfDG~leivKyLvE~gad~~I---------anrhGhTcLmIa~ykGh~~I~qyLle~-------g 173 (615)
T KOG0508|consen 117 -------NSTPLRAACFDGHLEIVKYLVEHGADPEI---------ANRHGHTCLMIACYKGHVDIAQYLLEQ-------G 173 (615)
T ss_pred -------CCccHHHHHhcchhHHHHHHHHcCCCCcc---------cccCCCeeEEeeeccCchHHHHHHHHh-------C
Confidence 24799999999999999999997765443 355688999999999999999999999 8
Q ss_pred cCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCH
Q 002122 765 LGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHY 844 (964)
Q Consensus 765 a~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~ 844 (964)
+ ++|.++..|.|+||.+|. .|+.||+++|+.+ |+-+. +|..|.|||-.|+..||.
T Consensus 174 A-----------------Dvn~ks~kGNTALH~caE-sG~vdivq~Ll~~------ga~i~-~d~~GmtPL~~Aa~tG~~ 228 (615)
T KOG0508|consen 174 A-----------------DVNAKSYKGNTALHDCAE-SGSVDIVQLLLKH------GAKID-VDGHGMTPLLLAAVTGHT 228 (615)
T ss_pred C-----------------CcchhcccCchHHHhhhh-cccHHHHHHHHhC------Cceee-ecCCCCchHHHHhhhcch
Confidence 8 999999999999999999 9999999999999 88776 477899999999999999
Q ss_pred HHHHHHH
Q 002122 845 SYIHLVQ 851 (964)
Q Consensus 845 svv~LL~ 851 (964)
++++.|.
T Consensus 229 ~iVe~L~ 235 (615)
T KOG0508|consen 229 DIVERLL 235 (615)
T ss_pred HHHHHHh
Confidence 9999887
|
|
| >PHA02795 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.3e-15 Score=172.49 Aligned_cols=164 Identities=14% Similarity=0.008 Sum_probs=118.2
Q ss_pred cCccccHHHHH---HHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC
Q 002122 648 FGKIDTKNQAM---DFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE 724 (964)
Q Consensus 648 ~g~~~~h~~al---~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~ 724 (964)
.+.+.+|..+- +.+.-+.+|+.+++..... ...++||.|+..++.++|+.|+.++++. ...+.
T Consensus 115 ~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~-------------~~~t~lh~A~~~~~~eIVk~Lls~Ga~~-~n~~~ 180 (437)
T PHA02795 115 SVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI-------------ECLNAYFRGICKKESSVVEFILNCGIPD-ENDVK 180 (437)
T ss_pred cccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC-------------CCCCHHHHHHHcCcHHHHHHHHhcCCcc-ccccc
Confidence 34566666552 4555666666666432221 1135777777777777777777765421 00000
Q ss_pred CCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCC
Q 002122 725 HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS 804 (964)
Q Consensus 725 ~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~ 804 (964)
.++ ....+.|++|.|+..++.++|++|+.+ |+ ++|.+|..|.||||+||. .|+
T Consensus 181 -~~l-~~~~~~t~l~~a~~~~~~eIve~LIs~-------GA-----------------DIN~kD~~G~TpLh~Aa~-~g~ 233 (437)
T PHA02795 181 -LDL-YKIIQYTRGFLVDEPTVLEIYKLCIPY-------IE-----------------DINQLDAGGRTLLYRAIY-AGY 233 (437)
T ss_pred -chh-hhhhccchhHHHHhcCHHHHHHHHHhC-------cC-----------------CcCcCCCCCCCHHHHHHH-cCC
Confidence 001 112355777777777777777777777 66 899999999999999999 999
Q ss_pred HHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcC--------CHHHHHHHHHhhhcCC
Q 002122 805 EDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRG--------HYSYIHLVQKKINKRP 858 (964)
Q Consensus 805 ~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rG--------h~svv~LL~~k~ak~~ 858 (964)
.+++++|+++ ||++|++|..|.||||+|+.+| |.+++++|.++++...
T Consensus 234 ~eiVelLL~~------GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~ 289 (437)
T PHA02795 234 IDLVSWLLEN------GANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSID 289 (437)
T ss_pred HHHHHHHHHC------CCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCC
Confidence 9999999999 9999999999999999999998 5799999999887654
|
|
| >PHA02716 CPXV016; CPX019; EVM010; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.8e-15 Score=181.52 Aligned_cols=190 Identities=13% Similarity=0.049 Sum_probs=134.5
Q ss_pred hHHHHHHHHhhhc-Ccchhh-hhcCccccHHHHH---HHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHH
Q 002122 627 SEIRMLESALEFN-RTDADV-ERFGKIDTKNQAM---DFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMD 701 (964)
Q Consensus 627 sEI~~LE~~le~~-a~~~~~-~e~g~~~~h~~al---~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve 701 (964)
.++..++.+++.+ ++.... ++.|.+++|.++. +.+..+.+|+.++......+ ....+|||+|+.
T Consensus 153 v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD-----------~~G~TPLH~Aa~ 221 (764)
T PHA02716 153 IDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQN-----------NHLITPLHTYLI 221 (764)
T ss_pred CCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCC-----------CCCCCHHHHHHH
Confidence 4566777788877 554443 5668888886542 12455667777664322222 235789999999
Q ss_pred cCc--hHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHH-------------------------------------
Q 002122 702 HEW--CAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAV------------------------------------- 742 (964)
Q Consensus 702 ~g~--~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AV------------------------------------- 742 (964)
.|+ .++|++||+.+++.+. .+..|+||||.|+
T Consensus 222 ~g~~~~eIVklLLe~GADVN~---------kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA 292 (764)
T PHA02716 222 TGNVCASVIKKIIELGGDMDM---------KCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLA 292 (764)
T ss_pred cCCCCHHHHHHHHHcCCCCCC---------CCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHH
Confidence 885 4899999986654221 2455888888764
Q ss_pred HcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHh-hCCCHHHHHHhhcCCCCCccc
Q 002122 743 RKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAG-KDGSEDVLDALTDDPGMVGIE 821 (964)
Q Consensus 743 r~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~-~~G~~dVV~lLL~~p~~vg~g 821 (964)
+.|+.++|++||+. |+ ++|.+|..|+||||+|+. ..++.+++++|+++ |
T Consensus 293 ~~g~leiVklLLe~-------GA-----------------dIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~------G 342 (764)
T PHA02716 293 RNIDISVVYSFLQP-------GV-----------------KLHYKDSAGRTCLHQYILRHNISTDIIKLLHEY------G 342 (764)
T ss_pred HcCCHHHHHHHHhC-------CC-----------------ceeccCCCCCCHHHHHHHHhCCCchHHHHHHHc------C
Confidence 33444445555544 44 788999999999999865 25688999999999 9
Q ss_pred cccccCCCCCCCHHHHHHH--------------cCCHHHHHHHHHhhhcCCC---CCCceee
Q 002122 822 AWKNARDSSGSTPEDYARL--------------RGHYSYIHLVQKKINKRPN---GGHVVVD 866 (964)
Q Consensus 822 AdinarD~~G~TPLh~A~~--------------rGh~svv~LL~~k~ak~~~---~~~v~v~ 866 (964)
|++|++|..|+||||+|+. .++.+++++|.+++++... .+.+.+.
T Consensus 343 ADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh 404 (764)
T PHA02716 343 NDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLT 404 (764)
T ss_pred CCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHH
Confidence 9999999999999999875 3789999999999886532 3445554
|
|
| >PHA02876 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.9e-15 Score=180.24 Aligned_cols=202 Identities=16% Similarity=0.085 Sum_probs=137.0
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccC----------C---
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLG----------H--- 679 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~----------~--- 679 (964)
+..|+++|... +.+..++.+++.|+.....+..|.+++|.++ .+.+..+.+++.........+ .
T Consensus 178 G~TpLh~Aa~~--G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~ 255 (682)
T PHA02876 178 CITPIHYAAER--GNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLET 255 (682)
T ss_pred CCCHHHHHHHC--CCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHH
Confidence 47898887665 7788888999988876555566788888877 355555555554332110000 0
Q ss_pred ------CCCCCCCcCccccchHHHHHHHcCch-HHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcC-CHHHHH
Q 002122 680 ------LDPNTDLFPLRRFKWLIEFSMDHEWC-AVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKN-SRPLVD 751 (964)
Q Consensus 680 ------~d~~l~l~ql~R~k~lL~fAve~g~~-aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g-~~e~Ve 751 (964)
..-.++ ..-....+|||+|+..++. .++++|++.+++.+ ..+..|.||||+|++.| ..++++
T Consensus 256 ~~~Ll~~g~~vn-~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin---------~~d~~g~TpLh~Aa~~g~~~~~v~ 325 (682)
T PHA02876 256 SLLLYDAGFSVN-SIDDCKNTPLHHASQAPSLSRLVPKLLERGADVN---------AKNIKGETPLYLMAKNGYDTENIR 325 (682)
T ss_pred HHHHHHCCCCCC-CCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCC---------CcCCCCCCHHHHHHHhCCCHHHHH
Confidence 000000 0112357899999988875 58888887544321 13456889999999988 588899
Q ss_pred HHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCC
Q 002122 752 LLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSG 831 (964)
Q Consensus 752 lLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G 831 (964)
+|+.. |+ ++|..|..|.||||+|+...++.+++.+|+++ |+++|.+|..|
T Consensus 326 ~Ll~~-------ga-----------------din~~d~~g~TpLh~A~~~~~~~~iv~lLl~~------gadin~~d~~G 375 (682)
T PHA02876 326 TLIML-------GA-----------------DVNAADRLYITPLHQASTLDRNKDIVITLLEL------GANVNARDYCD 375 (682)
T ss_pred HHHHc-------CC-----------------CCCCcccCCCcHHHHHHHhCCcHHHHHHHHHc------CCCCccCCCCC
Confidence 99888 66 67777777778888777745567777777777 77777777777
Q ss_pred CCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 832 STPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 832 ~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
.||||+|+.+|+.+++++|.+++++.
T Consensus 376 ~TpLh~Aa~~~~~~iv~~Ll~~gad~ 401 (682)
T PHA02876 376 KTPIHYAAVRNNVVIINTLLDYGADI 401 (682)
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 88888887777777777777776653
|
|
| >PHA02736 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.5e-16 Score=152.12 Aligned_cols=132 Identities=14% Similarity=0.051 Sum_probs=103.5
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCH---HHHHHHhccCCCccccccCcc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSR---PLVDLLLRFVPLEVSDRLGSE 768 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~---e~VelLL~~~p~~~~dGa~~~ 768 (964)
..+|||+|+..|+. +..++..... .+.........+..|.||||+||+.++. +++++|+.+ |+
T Consensus 17 g~tpLh~A~~~g~~--~~l~~~~~~~--~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~-------ga--- 82 (154)
T PHA02736 17 GENILHYLCRNGGV--TDLLAFKNAI--SDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEW-------GA--- 82 (154)
T ss_pred CCCHHHHHHHhCCH--HHHHHHHHHh--cchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHc-------CC---
Confidence 57899999999973 3333221110 0000000112356799999999999986 468899999 77
Q ss_pred ccccccccccccccCCCcCC-CCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHH
Q 002122 769 NKALVDGVHKGFLFRPDVIG-PAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYI 847 (964)
Q Consensus 769 ~~~lv~~a~~~y~fdpn~~d-~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv 847 (964)
++|.++ ..|.||||+|+. .|+.+++++|+.+. +++++.+|..|.||||+|+..|+.+++
T Consensus 83 --------------din~~~~~~g~T~Lh~A~~-~~~~~i~~~Ll~~~-----g~d~n~~~~~g~tpL~~A~~~~~~~i~ 142 (154)
T PHA02736 83 --------------DINGKERVFGNTPLHIAVY-TQNYELATWLCNQP-----GVNMEILNYAFKTPYYVACERHDAKMM 142 (154)
T ss_pred --------------CccccCCCCCCcHHHHHHH-hCCHHHHHHHHhCC-----CCCCccccCCCCCHHHHHHHcCCHHHH
Confidence 888888 599999999999 99999999999742 899999999999999999999999999
Q ss_pred HHHHHhhhcC
Q 002122 848 HLVQKKINKR 857 (964)
Q Consensus 848 ~LL~~k~ak~ 857 (964)
++|.+++++.
T Consensus 143 ~~Ll~~ga~~ 152 (154)
T PHA02736 143 NILRAKGAQC 152 (154)
T ss_pred HHHHHcCCCC
Confidence 9999988764
|
|
| >KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.3e-16 Score=179.23 Aligned_cols=125 Identities=26% Similarity=0.294 Sum_probs=111.2
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
.-++||+|+-++..+|+|+|++++++.+.-.| ..+-||||+|+++|+..||++||++ ||
T Consensus 78 g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG--------~l~stPLHWAar~G~~~vv~lLlqh-------GA------ 136 (600)
T KOG0509|consen 78 GVTLLHWAAINNRLDVARYLISHGADVNAIGG--------VLGSTPLHWAARNGHISVVDLLLQH-------GA------ 136 (600)
T ss_pred CccceeHHHHcCcHHHHHHHHHcCCCccccCC--------CCCCCcchHHHHcCcHHHHHHHHHc-------CC------
Confidence 35799999999999999999998765432211 2356999999999999999999999 99
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
+|+.+|..|.||||+||. .|+.-+|-+|+.+ ++++|.+|.+|+||||||+.+|+...+.+|.
T Consensus 137 -----------dpt~~D~~G~~~lHla~~-~~~~~~vayll~~------~~d~d~~D~~grTpLmwAaykg~~~~v~~LL 198 (600)
T KOG0509|consen 137 -----------DPTLKDKQGLTPLHLAAQ-FGHTALVAYLLSK------GADIDLRDNNGRTPLMWAAYKGFALFVRRLL 198 (600)
T ss_pred -----------CCceecCCCCcHHHHHHH-hCchHHHHHHHHh------cccCCCcCCCCCCHHHHHHHhcccHHHHHHH
Confidence 999999999999999999 9999999999999 8999999999999999999999998777777
Q ss_pred Hhhh
Q 002122 852 KKIN 855 (964)
Q Consensus 852 ~k~a 855 (964)
+-++
T Consensus 199 ~f~a 202 (600)
T KOG0509|consen 199 KFGA 202 (600)
T ss_pred Hhcc
Confidence 7554
|
|
| >PHA02798 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.4e-15 Score=171.53 Aligned_cols=188 Identities=10% Similarity=0.045 Sum_probs=142.1
Q ss_pred hHHHHHHHHhhhcCcchhhhhcCccccHHHHH------HHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHH
Q 002122 627 SEIRMLESALEFNRTDADVERFGKIDTKNQAM------DFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSM 700 (964)
Q Consensus 627 sEI~~LE~~le~~a~~~~~~e~g~~~~h~~al------~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAv 700 (964)
.+++.++.+++.|++....+..|.+++|..+. +.+.-+.+|++++......+ ...++|||+|+
T Consensus 49 ~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d-----------~~G~TpLh~a~ 117 (489)
T PHA02798 49 PSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKN-----------SDGETPLYCLL 117 (489)
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCC-----------CCcCcHHHHHH
Confidence 57888999999999776667789999988763 34667788888775322222 23578999999
Q ss_pred HcC---chHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCC---HHHHHHHhccCCCccccccCcccccccc
Q 002122 701 DHE---WCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNS---RPLVDLLLRFVPLEVSDRLGSENKALVD 774 (964)
Q Consensus 701 e~g---~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~---~e~VelLL~~~p~~~~dGa~~~~~~lv~ 774 (964)
.++ +.+++++|++.+++.+. .+..|.||||+|++.++ .++|++||+. |+
T Consensus 118 ~~~~~~~~~iv~~Ll~~Gadvn~---------~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~-------ga--------- 172 (489)
T PHA02798 118 SNGYINNLEILLFMIENGADTTL---------LDKDGFTMLQVYLQSNHHIDIEIIKLLLEK-------GV--------- 172 (489)
T ss_pred HcCCcChHHHHHHHHHcCCCccc---------cCCCCCcHHHHHHHcCCcchHHHHHHHHHh-------CC---------
Confidence 875 78999999997654221 35669999999999988 9999999999 77
Q ss_pred ccccccccCCCcCC-CCCChHHHHHHhh---CCCHHHHHHhhcCCCCCc-------------------------------
Q 002122 775 GVHKGFLFRPDVIG-PAGLTPIHIAAGK---DGSEDVLDALTDDPGMVG------------------------------- 819 (964)
Q Consensus 775 ~a~~~y~fdpn~~d-~~G~TPLHiAA~~---~G~~dVV~lLL~~p~~vg------------------------------- 819 (964)
++|..+ ..|.||||.|+.. .++.+++++|+++-..+-
T Consensus 173 --------din~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~ 244 (489)
T PHA02798 173 --------DINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDF 244 (489)
T ss_pred --------CcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHH
Confidence 666654 4677888877651 246777777776511000
Q ss_pred --cccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 820 --IEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 820 --~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
-++++|.+|..|.||||+|+..|+.+++++|.+++++..
T Consensus 245 l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin 285 (489)
T PHA02798 245 IFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDIN 285 (489)
T ss_pred HHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCccc
Confidence 035778899999999999999999999999999998754
|
|
| >KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.7e-16 Score=189.13 Aligned_cols=95 Identities=29% Similarity=0.306 Sum_probs=90.1
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHH
Q 002122 731 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDA 810 (964)
Q Consensus 731 ~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~l 810 (964)
...+.||||.||.+|+..+|++||++ |+ +++.+++.|+||||.||. .|+.+|+.+
T Consensus 537 ~~r~~TpLh~A~~~g~v~~VkfLLe~-------gA-----------------dv~ak~~~G~TPLH~Aa~-~G~~~i~~L 591 (1143)
T KOG4177|consen 537 TGRGYTPLHVAVHYGNVDLVKFLLEH-------GA-----------------DVNAKDKLGYTPLHQAAQ-QGHNDIAEL 591 (1143)
T ss_pred cccccchHHHHHhcCCchHHHHhhhC-------Cc-----------------cccccCCCCCChhhHHHH-cChHHHHHH
Confidence 34577999999999999999999999 88 899999999999999999 999999999
Q ss_pred hhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhc
Q 002122 811 LTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINK 856 (964)
Q Consensus 811 LL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak 856 (964)
|+++ ||++|+.|.+|.||||+|...|+++++++|....++
T Consensus 592 Llk~------GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 592 LLKH------GASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTAT 631 (1143)
T ss_pred HHHc------CCCCCcccccCcchhHHHHHhcccchhhHHHhccCc
Confidence 9999 999999999999999999999999999999987766
|
|
| >PHA02716 CPXV016; CPX019; EVM010; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.6e-15 Score=177.74 Aligned_cols=191 Identities=15% Similarity=-0.025 Sum_probs=131.8
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHHH-HHH--HHHhhhhcccccccccCCCCCCCCCcCccc
Q 002122 615 FFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQAM-DFI--HEIGWLFHRSQSKSRLGHLDPNTDLFPLRR 691 (964)
Q Consensus 615 ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~al-~fL--~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R 691 (964)
..|++.+....-..+..+|.+++.|+.....+..|.+++|.++. +.+ ..+..|+.++......+. .
T Consensus 178 ~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~-----------~ 246 (764)
T PHA02716 178 YGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCV-----------N 246 (764)
T ss_pred CcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCC-----------C
Confidence 55666543222234566777777776655555667777777763 322 345566666543222221 1
Q ss_pred cchHHHH-------------------------------------HHHcCchHHHHHHhhhhccCcccCCCCCchhhccCC
Q 002122 692 FKWLIEF-------------------------------------SMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTE 734 (964)
Q Consensus 692 ~k~lL~f-------------------------------------Ave~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G 734 (964)
..+|||+ |+..|+.++|+.||+.+++.+ ..+..|
T Consensus 247 G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN---------~kD~~G 317 (764)
T PHA02716 247 GMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLH---------YKDSAG 317 (764)
T ss_pred CCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCcee---------ccCCCC
Confidence 2344443 455666777777776443211 135568
Q ss_pred CcHHHHHHH--cCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhh-----------
Q 002122 735 LGLLHRAVR--KNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGK----------- 801 (964)
Q Consensus 735 ~TpLH~AVr--~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~----------- 801 (964)
.||||+|+. .++.++|++||+. |+ ++|.+|..|.||||+|+..
T Consensus 318 ~TPLH~Aaa~~~~~~eIVklLLe~-------GA-----------------DIN~kD~~G~TPLH~A~~~lav~~~ld~~~ 373 (764)
T PHA02716 318 RTCLHQYILRHNISTDIIKLLHEY-------GN-----------------DLNEPDNIGNTVLHTYLSMLSVVNILDPET 373 (764)
T ss_pred CCHHHHHHHHhCCCchHHHHHHHc-------CC-----------------CCccCCCCCCCHHHHHHHhhhhhccccccc
Confidence 999999875 4578999999999 88 8999999999999998751
Q ss_pred --CCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHH----HHHcCCHHHHHHHHHhhh
Q 002122 802 --DGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDY----ARLRGHYSYIHLVQKKIN 855 (964)
Q Consensus 802 --~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~----A~~rGh~svv~LL~~k~a 855 (964)
.++.++|++|+++ ||+++++|..|.||||. |...++.+++++|..+++
T Consensus 374 ~~~~~~eVVklLL~~------GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~ 427 (764)
T PHA02716 374 DNDIRLDVIQCLISL------GADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKV 427 (764)
T ss_pred cccChHHHHHHHHHC------CCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcc
Confidence 3689999999999 99999999999999993 233578999999988654
|
|
| >PHA02917 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=9e-15 Score=176.17 Aligned_cols=205 Identities=11% Similarity=0.085 Sum_probs=143.7
Q ss_pred CCCcceeecc-hhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHHH-HHH---HH-HhhhhcccccccccCCCCCCCCC
Q 002122 613 STFFPFIVAE-EDVCSEIRMLESALEFNRTDADVERFGKIDTKNQAM-DFI---HE-IGWLFHRSQSKSRLGHLDPNTDL 686 (964)
Q Consensus 613 s~ffP~LVad-~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~al-~fL---~E-IGWLLqr~~~~~~~~~~d~~l~l 686 (964)
++-.|+++|+ +..++.++.++.+++.|+.....+..|.+++|.++. +.+ .+ +..|+...... + . +
T Consensus 31 ~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~---n-~----~- 101 (661)
T PHA02917 31 FKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYS---N-I----N- 101 (661)
T ss_pred CCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCC---C-C----C-
Confidence 3468999876 456678899999999999877667789999999983 433 22 23444432110 0 1 1
Q ss_pred cCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHH--HcCCHHHHHHHhccCCCccccc
Q 002122 687 FPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAV--RKNSRPLVDLLLRFVPLEVSDR 764 (964)
Q Consensus 687 ~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AV--r~g~~e~VelLL~~~p~~~~dG 764 (964)
.+..++++|+++++.++|++||+.+++.+. .+..|+||||.|+ ..|+.++|++||++ |
T Consensus 102 ----~~~~~~~~a~~~~~~e~vk~Ll~~Gadin~---------~d~~g~T~L~~~~a~~~~~~eivklLi~~-------G 161 (661)
T PHA02917 102 ----DFNIFSYMKSKNVDVDLIKVLVEHGFDLSV---------KCENHRSVIENYVMTDDPVPEIIDLFIEN-------G 161 (661)
T ss_pred ----CcchHHHHHhhcCCHHHHHHHHHcCCCCCc---------cCCCCccHHHHHHHccCCCHHHHHHHHHc-------C
Confidence 112467889999999999999997654322 3556999999654 46899999999999 7
Q ss_pred cCccccccccccccccccCCCcCCCCCChHHHHHHhh----------CCCHHHHHHhhcCCCCCccccccccCCCCCCCH
Q 002122 765 LGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGK----------DGSEDVLDALTDDPGMVGIEAWKNARDSSGSTP 834 (964)
Q Consensus 765 a~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~----------~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TP 834 (964)
++.+.+- .....+|.|+ +...+.+.||||+|+.. .++.++|++|+++ ||++|.+|.+|.||
T Consensus 162 a~vn~~d--~~~~~g~~~~-~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~------Gadvn~~d~~G~Tp 232 (661)
T PHA02917 162 CSVLYED--EDDEYGYAYD-DYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINH------GIKPSSIDKNYCTA 232 (661)
T ss_pred CCccccc--cccccccccc-cccccccccHHHHHHhhcccccccccccCcHHHHHHHHHC------CCCcccCCCCCCcH
Confidence 7211000 0000111111 12223457999999751 3588999999999 99999999999999
Q ss_pred HHHHHHcCCH--HHHHHHHHhhhc
Q 002122 835 EDYARLRGHY--SYIHLVQKKINK 856 (964)
Q Consensus 835 Lh~A~~rGh~--svv~LL~~k~ak 856 (964)
||+|+.+||. +++++|.+ +++
T Consensus 233 Lh~A~~~g~~~~eivk~Li~-g~d 255 (661)
T PHA02917 233 LQYYIKSSHIDIDIVKLLMK-GID 255 (661)
T ss_pred HHHHHHcCCCcHHHHHHHHh-CCc
Confidence 9999999995 79999975 543
|
|
| >PLN03192 Voltage-dependent potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.5e-14 Score=178.17 Aligned_cols=157 Identities=12% Similarity=0.015 Sum_probs=122.2
Q ss_pred CccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCc
Q 002122 649 GKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS 727 (964)
Q Consensus 649 g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~ 727 (964)
...+++.+| .+....+..+++++......+ ...++|||+|+.+|+.++|+.||+.+++.+
T Consensus 525 ~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d-----------~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin-------- 585 (823)
T PLN03192 525 MASNLLTVASTGNAALLEELLKAKLDPDIGD-----------SKGRTPLHIAASKGYEDCVLVLLKHACNVH-------- 585 (823)
T ss_pred chhHHHHHHHcCCHHHHHHHHHCCCCCCCCC-----------CCCCCHHHHHHHcChHHHHHHHHhcCCCCC--------
Confidence 345677777 466666777777664322221 235789999999999999999998654321
Q ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHH
Q 002122 728 LDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDV 807 (964)
Q Consensus 728 le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dV 807 (964)
..+..|.||||.|+..|+.++|++|++. ++ .. ....|.||||.||. .|+.++
T Consensus 586 -~~d~~G~TpL~~A~~~g~~~iv~~L~~~-------~~-----------------~~--~~~~~~~~L~~Aa~-~g~~~~ 637 (823)
T PLN03192 586 -IRDANGNTALWNAISAKHHKIFRILYHF-------AS-----------------IS--DPHAAGDLLCTAAK-RNDLTA 637 (823)
T ss_pred -CcCCCCCCHHHHHHHhCCHHHHHHHHhc-------Cc-----------------cc--CcccCchHHHHHHH-hCCHHH
Confidence 1355688999999999999999999977 33 11 12357789999999 999999
Q ss_pred HHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 808 LDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 808 V~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
+++|+++ |+++|++|.+|.||||+|+..||.+++++|.+++++..
T Consensus 638 v~~Ll~~------Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~ 682 (823)
T PLN03192 638 MKELLKQ------GLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVD 682 (823)
T ss_pred HHHHHHC------CCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC
Confidence 9999999 99999999999999999999999999999999887654
|
|
| >PHA02989 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.6e-14 Score=166.02 Aligned_cols=180 Identities=16% Similarity=0.045 Sum_probs=138.8
Q ss_pred hHHHHHHHHhhhcCcchhhhhcCccccHHHHH-H--HHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcC
Q 002122 627 SEIRMLESALEFNRTDADVERFGKIDTKNQAM-D--FIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHE 703 (964)
Q Consensus 627 sEI~~LE~~le~~a~~~~~~e~g~~~~h~~al-~--fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g 703 (964)
-.++.++.+++.|++.... ..|.+++|..+. . ....+..|++++......+ ...+|||.|+.++
T Consensus 14 ~~~~~v~~LL~~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~------------~~~tpL~~a~~~~ 80 (494)
T PHA02989 14 VDKNALEFLLRTGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG------------YIETPLCAVLRNR 80 (494)
T ss_pred CcHHHHHHHHHcCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC------------CCCCcHHHHHhcc
Confidence 3456777888888865443 457777776542 2 4566778888775433221 1267999988754
Q ss_pred ------chHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHc---CCHHHHHHHhccCCCccccccCcccccccc
Q 002122 704 ------WCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRK---NSRPLVDLLLRFVPLEVSDRLGSENKALVD 774 (964)
Q Consensus 704 ------~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~---g~~e~VelLL~~~p~~~~dGa~~~~~~lv~ 774 (964)
+.++|++||+.+++.+. .+..|.||||.|+.. ++.++|++||++ |+
T Consensus 81 ~~~~~~~~~iv~~Ll~~Gadin~---------~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~-------Ga--------- 135 (494)
T PHA02989 81 EITSNKIKKIVKLLLKFGADINL---------KTFNGVSPIVCFIYNSNINNCDMLRFLLSK-------GI--------- 135 (494)
T ss_pred CcchhhHHHHHHHHHHCCCCCCC---------CCCCCCcHHHHHHHhcccCcHHHHHHHHHC-------CC---------
Confidence 56799999997654321 245689999988765 689999999999 88
Q ss_pred ccccccccCC-CcCCCCCChHHHHHHh-hCCCHHHHHHhhcCCCCCcccccccc-CCCCCCCHHHHHHHc----CCHHHH
Q 002122 775 GVHKGFLFRP-DVIGPAGLTPIHIAAG-KDGSEDVLDALTDDPGMVGIEAWKNA-RDSSGSTPEDYARLR----GHYSYI 847 (964)
Q Consensus 775 ~a~~~y~fdp-n~~d~~G~TPLHiAA~-~~G~~dVV~lLL~~p~~vg~gAdina-rD~~G~TPLh~A~~r----Gh~svv 847 (964)
++ +.+|..|+||||+|+. ..++.++|++|+++ ||+++. .|..|.||||+|... ++.+++
T Consensus 136 --------din~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~------Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv 201 (494)
T PHA02989 136 --------NVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSF------GVNLFEKTSLYGLTPMNIYLRNDIDVISIKVI 201 (494)
T ss_pred --------CcccccCCCCCCHHHHHHHhccCCHHHHHHHHHc------CCCccccccccCCChHHHHHhcccccccHHHH
Confidence 88 7899999999999875 25789999999999 999999 688999999999876 489999
Q ss_pred HHHHHhhhcCC
Q 002122 848 HLVQKKINKRP 858 (964)
Q Consensus 848 ~LL~~k~ak~~ 858 (964)
++|.+++++..
T Consensus 202 ~~Ll~~Ga~vn 212 (494)
T PHA02989 202 KYLIKKGVNIE 212 (494)
T ss_pred HHHHhCCCCcc
Confidence 99999998754
|
|
| >PHA02884 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.1e-14 Score=158.18 Aligned_cols=122 Identities=17% Similarity=0.178 Sum_probs=103.0
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
..+|+.|+..++.++++.||+.+++.+. .... .+..|.||||+|++.++.+++++|+++ |+
T Consensus 34 ~~lL~~A~~~~~~eivk~LL~~GAdiN~----~~~~-sd~~g~TpLh~Aa~~~~~eivklLL~~-------GA------- 94 (300)
T PHA02884 34 ANILYSSIKFHYTDIIDAILKLGADPEA----PFPL-SENSKTNPLIYAIDCDNDDAAKLLIRY-------GA------- 94 (300)
T ss_pred CHHHHHHHHcCCHHHHHHHHHCCCCccc----cCcc-cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-------
Confidence 5689999999999999999997664321 1100 134588999999999999999999999 88
Q ss_pred ccccccccccCCCcC-CCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVI-GPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 850 (964)
Q Consensus 773 v~~a~~~y~fdpn~~-d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL 850 (964)
++|.. +..|.||||+||. .|+.+++++|+++ ||+++.+|..|.||||+|+..++..++.++
T Consensus 95 ----------DVN~~~~~~g~TpLh~Aa~-~~~~eivklLL~~------GAdin~kd~~G~TpL~~A~~~~~~~~~~~~ 156 (300)
T PHA02884 95 ----------DVNRYAEEAKITPLYISVL-HGCLKCLEILLSY------GADINIQTNDMVTPIELALMICNNFLAFMI 156 (300)
T ss_pred ----------CcCcccCCCCCCHHHHHHH-cCCHHHHHHHHHC------CCCCCCCCCCCCCHHHHHHHhCChhHHHHh
Confidence 88986 5689999999999 9999999999999 999999999999999999987766555443
|
|
| >PLN03192 Voltage-dependent potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.8e-14 Score=172.38 Aligned_cols=172 Identities=14% Similarity=0.101 Sum_probs=141.8
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccc
Q 002122 615 FFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFK 693 (964)
Q Consensus 615 ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k 693 (964)
-.|++.|.. -+....++.+++.+++....+..|++++|.+| .+...-+..|++++......+ ...+
T Consensus 526 ~~~L~~Aa~--~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d-----------~~G~ 592 (823)
T PLN03192 526 ASNLLTVAS--TGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRD-----------ANGN 592 (823)
T ss_pred hhHHHHHHH--cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcC-----------CCCC
Confidence 455565544 37788899999999887766788999999999 588888888888775322222 2357
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccc
Q 002122 694 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 773 (964)
Q Consensus 694 ~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv 773 (964)
+|||+|+..|+.++++.|++.... . ....+.++||.||.+|+.++|++||++ |+
T Consensus 593 TpL~~A~~~g~~~iv~~L~~~~~~--------~---~~~~~~~~L~~Aa~~g~~~~v~~Ll~~-------Ga-------- 646 (823)
T PLN03192 593 TALWNAISAKHHKIFRILYHFASI--------S---DPHAAGDLLCTAAKRNDLTAMKELLKQ-------GL-------- 646 (823)
T ss_pred CHHHHHHHhCCHHHHHHHHhcCcc--------c---CcccCchHHHHHHHhCCHHHHHHHHHC-------CC--------
Confidence 899999999999999999974321 0 112355999999999999999999999 88
Q ss_pred cccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCC-CCHHHHHHHc
Q 002122 774 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSG-STPEDYARLR 841 (964)
Q Consensus 774 ~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G-~TPLh~A~~r 841 (964)
++|.+|..|.||||+|+. .|+.+++++|+++ ||+++.+|..| .||++++...
T Consensus 647 ---------din~~d~~G~TpLh~A~~-~g~~~iv~~Ll~~------GAdv~~~~~~g~~t~~~l~~~~ 699 (823)
T PLN03192 647 ---------NVDSEDHQGATALQVAMA-EDHVDMVRLLIMN------GADVDKANTDDDFSPTELRELL 699 (823)
T ss_pred ---------CCCCCCCCCCCHHHHHHH-CCcHHHHHHHHHc------CCCCCCCCCCCCCCHHHHHHHH
Confidence 899999999999999999 9999999999999 99999999988 9999888654
|
|
| >PHA02917 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2e-13 Score=164.69 Aligned_cols=182 Identities=12% Similarity=0.028 Sum_probs=135.1
Q ss_pred HHHHHHHhhhcCcchhhhhcCccccHHHHH----HHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCc
Q 002122 629 IRMLESALEFNRTDADVERFGKIDTKNQAM----DFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEW 704 (964)
Q Consensus 629 I~~LE~~le~~a~~~~~~e~g~~~~h~~al----~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~ 704 (964)
++.+.+++..+....+.+++|.+++|.+|. +.+..+..||.++......+ ....+|||+|+..|+
T Consensus 12 ~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~-----------~~g~TpL~~Aa~~g~ 80 (661)
T PHA02917 12 LDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKN-----------WRQLTPLEEYTNSRH 80 (661)
T ss_pred HHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccC-----------CCCCCHHHHHHHcCC
Confidence 455666776666555557789999999752 56888888888875332222 235789999999999
Q ss_pred hHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCC
Q 002122 705 CAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRP 784 (964)
Q Consensus 705 ~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdp 784 (964)
.++++.+.+.+.+.....+ . ....+++|.|+.+++.++|++||++ |+ ++
T Consensus 81 ~~v~~~~~~~Ll~~~~~~n----~---~~~~~~~~~a~~~~~~e~vk~Ll~~-------Ga-----------------di 129 (661)
T PHA02917 81 VKVNKDIAMALLEATGYSN----I---NDFNIFSYMKSKNVDVDLIKVLVEH-------GF-----------------DL 129 (661)
T ss_pred hhHHHHHHHHHHhccCCCC----C---CCcchHHHHHhhcCCHHHHHHHHHc-------CC-----------------CC
Confidence 7766544433322110001 0 0122678889999999999999999 88 99
Q ss_pred CcCCCCCChHHHHHHh-hCCCHHHHHHhhcCCCCCccccccccCCC---CC-----------CCHHHHHHH---------
Q 002122 785 DVIGPAGLTPIHIAAG-KDGSEDVLDALTDDPGMVGIEAWKNARDS---SG-----------STPEDYARL--------- 840 (964)
Q Consensus 785 n~~d~~G~TPLHiAA~-~~G~~dVV~lLL~~p~~vg~gAdinarD~---~G-----------~TPLh~A~~--------- 840 (964)
|.+|..|+||||+|+. ..|+.+||++|+++ ||++|.+|. .| .||||+|+.
T Consensus 130 n~~d~~g~T~L~~~~a~~~~~~eivklLi~~------Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~ 203 (661)
T PHA02917 130 SVKCENHRSVIENYVMTDDPVPEIIDLFIEN------GCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDT 203 (661)
T ss_pred CccCCCCccHHHHHHHccCCCHHHHHHHHHc------CCCccccccccccccccccccccccccHHHHHHhhcccccccc
Confidence 9999999999996543 37899999999999 999987764 34 599999986
Q ss_pred --cCCHHHHHHHHHhhhcCC
Q 002122 841 --RGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 841 --rGh~svv~LL~~k~ak~~ 858 (964)
++|.+++++|++.+++..
T Consensus 204 ~~~~~~eiv~~Li~~Gadvn 223 (661)
T PHA02917 204 RAYVRPEVVKCLINHGIKPS 223 (661)
T ss_pred cccCcHHHHHHHHHCCCCcc
Confidence 568999999999988654
|
|
| >KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.5e-14 Score=178.69 Aligned_cols=127 Identities=26% Similarity=0.251 Sum_probs=96.6
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++||.|...||.++++.|++..+. ..+ ....+.++||.|...+...+++.|+.. |+
T Consensus 474 G~T~Lhlaaq~Gh~~~~~llle~~~~--------~~~-~~~~~l~~lhla~~~~~v~~~~~l~~~-------ga------ 531 (1143)
T KOG4177|consen 474 GFTPLHLAAQEGHTEVVQLLLEGGAN--------DNL-DAKKGLTPLHLAADEDTVKVAKILLEH-------GA------ 531 (1143)
T ss_pred cCcchhhhhccCCchHHHHhhhcCCc--------cCc-cchhccchhhhhhhhhhHHHHHHHhhc-------CC------
Confidence 45566666666666666666553211 111 122355666666666666666666655 55
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
+.+.++..|.||||+|+. .|+.++|++|+++ ||+++++|+.|+||||.|+..||.+++++|.
T Consensus 532 -----------~v~~~~~r~~TpLh~A~~-~g~v~~VkfLLe~------gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLl 593 (1143)
T KOG4177|consen 532 -----------NVDLRTGRGYTPLHVAVH-YGNVDLVKFLLEH------GADVNAKDKLGYTPLHQAAQQGHNDIAELLL 593 (1143)
T ss_pred -----------ceehhcccccchHHHHHh-cCCchHHHHhhhC------CccccccCCCCCChhhHHHHcChHHHHHHHH
Confidence 778889999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcCC
Q 002122 852 KKINKRP 858 (964)
Q Consensus 852 ~k~ak~~ 858 (964)
+.++...
T Consensus 594 k~GA~vn 600 (1143)
T KOG4177|consen 594 KHGASVN 600 (1143)
T ss_pred HcCCCCC
Confidence 9998654
|
|
| >KOG0508 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.3e-14 Score=161.09 Aligned_cols=188 Identities=18% Similarity=0.130 Sum_probs=140.5
Q ss_pred hhHHHHHHHHhhhcCcchhh-----hhcCccccHHHH-HHHHHHHhhhhcccccccc-c--CCCCCCCCCcCccccchHH
Q 002122 626 CSEIRMLESALEFNRTDADV-----ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSR-L--GHLDPNTDLFPLRRFKWLI 696 (964)
Q Consensus 626 CsEI~~LE~~le~~a~~~~~-----~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~-~--~~~d~~l~l~ql~R~k~lL 696 (964)
-.-+..|..++..++..+-. ..+|.+++=.+| -+++..+.+||.+...... . .++|. ..+ ..-.||
T Consensus 14 ~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDg----e~I-egappL 88 (615)
T KOG0508|consen 14 DGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDG----ETI-EGAPPL 88 (615)
T ss_pred hhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCC----ccc-CCCchh
Confidence 34555555555544421111 124667766666 4777777777775532111 1 11211 111 234578
Q ss_pred HHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccccccc
Q 002122 697 EFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGV 776 (964)
Q Consensus 697 ~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a 776 (964)
-.|+-.||.+|||.|+..+++ |+ .. .....|||-.||.-|+.++|++|+++ |+
T Consensus 89 WaAsaAGHl~vVk~L~~~ga~--VN--~t-----T~TNStPLraACfDG~leivKyLvE~-------ga----------- 141 (615)
T KOG0508|consen 89 WAASAAGHLEVVKLLLRRGAS--VN--DT-----TRTNSTPLRAACFDGHLEIVKYLVEH-------GA----------- 141 (615)
T ss_pred hHHhccCcHHHHHHHHHhcCc--cc--cc-----cccCCccHHHHHhcchhHHHHHHHHc-------CC-----------
Confidence 888999999999999997642 22 11 12244999999999999999999999 88
Q ss_pred ccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhc
Q 002122 777 HKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINK 856 (964)
Q Consensus 777 ~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak 856 (964)
||++.|..|.|-|||||. .|+.+|+++|++. |||+|+++..|.|+||.+++.||.+++++|.+.+++
T Consensus 142 ------d~~IanrhGhTcLmIa~y-kGh~~I~qyLle~------gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~ 208 (615)
T KOG0508|consen 142 ------DPEIANRHGHTCLMIACY-KGHVDIAQYLLEQ------GADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAK 208 (615)
T ss_pred ------CCcccccCCCeeEEeeec-cCchHHHHHHHHh------CCCcchhcccCchHHHhhhhcccHHHHHHHHhCCce
Confidence 999999999999999999 9999999999999 999999999999999999999999999999998876
Q ss_pred CC
Q 002122 857 RP 858 (964)
Q Consensus 857 ~~ 858 (964)
..
T Consensus 209 i~ 210 (615)
T KOG0508|consen 209 ID 210 (615)
T ss_pred ee
Confidence 54
|
|
| >PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain | Back alignment and domain information |
|---|
Probab=99.50 E-value=9.8e-14 Score=124.02 Aligned_cols=86 Identities=24% Similarity=0.363 Sum_probs=77.5
Q ss_pred HHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCC
Q 002122 738 LHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGM 817 (964)
Q Consensus 738 LH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~ 817 (964)
||.||+.|+.+++++|++. +. +++. |.||||+|+. .|+.+++++|+++
T Consensus 1 L~~A~~~~~~~~~~~ll~~-------~~-----------------~~~~----~~~~l~~A~~-~~~~~~~~~Ll~~--- 48 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEK-------GA-----------------DINL----GNTALHYAAE-NGNLEIVKLLLEN--- 48 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHT-------TS-----------------TTTS----SSBHHHHHHH-TTTHHHHHHHHHT---
T ss_pred CHHHHHcCCHHHHHHHHHC-------cC-----------------CCCC----CCCHHHHHHH-cCCHHHHHHHHHh---
Confidence 8999999999999999998 44 4443 8999999999 9999999999999
Q ss_pred CccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 818 VGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 818 vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
|++++.+|.+|+||||+|+..|+.+++++|.+++.+..
T Consensus 49 ---g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 86 (89)
T PF12796_consen 49 ---GADINSQDKNGNTALHYAAENGNLEIVKLLLEHGADVN 86 (89)
T ss_dssp ---TTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-TT
T ss_pred ---cccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 99999999999999999999999999999999987654
|
These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B .... |
| >KOG0514 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.2e-14 Score=154.63 Aligned_cols=136 Identities=20% Similarity=0.174 Sum_probs=113.6
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCC---CC----------------------------chhhccCCCcHHHH
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE---HP----------------------------SLDLALTELGLLHR 740 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~---~~----------------------------~le~~l~G~TpLH~ 740 (964)
.+++|||||.+.+.+||+.||+.++.. +|.-. .. +......|.|+|++
T Consensus 268 GNTALHYsVSHaNF~VV~~LLDSgvC~-VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQTALML 346 (452)
T KOG0514|consen 268 GNTALHYAVSHANFDVVSILLDSGVCD-VDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQTALML 346 (452)
T ss_pred CCeeeeeeecccchHHHHHHhccCccc-ccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcchhhhh
Confidence 588999999999999999999965421 11000 00 00012237899999
Q ss_pred HHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCcc
Q 002122 741 AVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGI 820 (964)
Q Consensus 741 AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~ 820 (964)
||..|..+||+.||.. || ++|+.|.+|-|+|+.||. +||.+||++||..|
T Consensus 347 AVSHGr~d~vk~LLac-------gA-----------------dVNiQDdDGSTALMCA~E-HGhkEivklLLA~p----- 396 (452)
T KOG0514|consen 347 AVSHGRVDMVKALLAC-------GA-----------------DVNIQDDDGSTALMCAAE-HGHKEIVKLLLAVP----- 396 (452)
T ss_pred hhhcCcHHHHHHHHHc-------cC-----------------CCccccCCccHHHhhhhh-hChHHHHHHHhccC-----
Confidence 9999999999999999 88 999999999999999999 99999999999998
Q ss_pred ccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 821 EAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 821 gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
++|+...|.+|.|+|.+|-..||.+|.-||-.+.+-+.
T Consensus 397 ~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~~n~~~ 434 (452)
T KOG0514|consen 397 SCDISLTDVDGSTALSIALEAGHREIAVMLYAHMNIKR 434 (452)
T ss_pred cccceeecCCCchhhhhHHhcCchHHHHHHHHHHHhhh
Confidence 89999999999999999999999999999998877544
|
|
| >PHA02795 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.7e-13 Score=157.13 Aligned_cols=141 Identities=13% Similarity=0.061 Sum_probs=113.1
Q ss_pred cchHHHHHHH--cCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccc
Q 002122 692 FKWLIEFSMD--HEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSEN 769 (964)
Q Consensus 692 ~k~lL~fAve--~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~ 769 (964)
.+++||+++. .|+.++|++||+++++.+. ..+.||||.|+..++.++|++|+.+ |++..
T Consensus 116 ~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~-----------~~~~t~lh~A~~~~~~eIVk~Lls~-------Ga~~~- 176 (437)
T PHA02795 116 VQDLLLYYLSNAYVEIDIVDFMVDHGAVIYK-----------IECLNAYFRGICKKESSVVEFILNC-------GIPDE- 176 (437)
T ss_pred ccHHHHHHHHhcCCCHHHHHHHHHCCCCCCC-----------CCCCCHHHHHHHcCcHHHHHHHHhc-------CCccc-
Confidence 5889999999 8999999999998765322 1346999999999999999999999 65100
Q ss_pred cccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHH
Q 002122 770 KALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHL 849 (964)
Q Consensus 770 ~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~L 849 (964)
. ..+.+..+..|.||+|+|+. .++.+++++|+++ ||++|.+|..|.||||+|+..||.+++++
T Consensus 177 ----n------~~~~~l~~~~~~t~l~~a~~-~~~~eIve~LIs~------GADIN~kD~~G~TpLh~Aa~~g~~eiVel 239 (437)
T PHA02795 177 ----N------DVKLDLYKIIQYTRGFLVDE-PTVLEIYKLCIPY------IEDINQLDAGGRTLLYRAIYAGYIDLVSW 239 (437)
T ss_pred ----c------cccchhhhhhccchhHHHHh-cCHHHHHHHHHhC------cCCcCcCCCCCCCHHHHHHHcCCHHHHHH
Confidence 0 00111223468899999999 9999999999999 99999999999999999999999999999
Q ss_pred HHHhhhcCCC---CCCceeecC
Q 002122 850 VQKKINKRPN---GGHVVVDIC 868 (964)
Q Consensus 850 L~~k~ak~~~---~~~v~v~ip 868 (964)
|.+++++... .+.+.++++
T Consensus 240 LL~~GAdIN~~d~~G~TpLh~A 261 (437)
T PHA02795 240 LLENGANVNAVMSNGYTCLDVA 261 (437)
T ss_pred HHHCCCCCCCcCCCCCCHHHHH
Confidence 9999986542 334444443
|
|
| >TIGR00870 trp transient-receptor-potential calcium channel protein | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.2e-13 Score=165.90 Aligned_cols=208 Identities=15% Similarity=0.015 Sum_probs=136.6
Q ss_pred CCccee-ecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHHH---HHHHHHhhhhcccccccccCCCCCCCCCcCc
Q 002122 614 TFFPFI-VAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQAM---DFIHEIGWLFHRSQSKSRLGHLDPNTDLFPL 689 (964)
Q Consensus 614 ~ffP~L-Vad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~al---~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql 689 (964)
+-.|++ .|... +.....|.+++.++ .+..|.+.+|.++. +.+.++-..+.....................
T Consensus 52 G~t~Lh~~A~~~--~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~ 125 (743)
T TIGR00870 52 GRSALFVAAIEN--ENLELTELLLNLSC----RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEF 125 (743)
T ss_pred chhHHHHHHHhc--ChHHHHHHHHhCCC----CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhcccccccc
Confidence 367887 54433 34445555666665 23468889998875 3343433332222110000000000111223
Q ss_pred cccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCC-----chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccc
Q 002122 690 RRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHP-----SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDR 764 (964)
Q Consensus 690 ~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~-----~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dG 764 (964)
....+|||+|+.+|+.++|+.||+.+++.+...+... .......|.||||.|+..|+.+++++|+++ |
T Consensus 126 ~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~-------g 198 (743)
T TIGR00870 126 TPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSED-------P 198 (743)
T ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcC-------C
Confidence 3568999999999999999999998776543221110 001123478999999999999999999999 7
Q ss_pred cCccccccccccccccccCCCcCCCCCChHHHHHHhhCC---------CHHHHHHhhcCCCCCcccccc----ccCCCCC
Q 002122 765 LGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDG---------SEDVLDALTDDPGMVGIEAWK----NARDSSG 831 (964)
Q Consensus 765 a~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G---------~~dVV~lLL~~p~~vg~gAdi----narD~~G 831 (964)
+ ++|.+|..|+||||+|+. .+ ...+.+++++... -..+. +..|.+|
T Consensus 199 a-----------------din~~d~~g~T~Lh~A~~-~~~~~~~~~~l~~~~~~~l~~ll~---~~~~~~el~~i~N~~g 257 (743)
T TIGR00870 199 A-----------------DILTADSLGNTLLHLLVM-ENEFKAEYEELSCQMYNFALSLLD---KLRDSKELEVILNHQG 257 (743)
T ss_pred c-----------------chhhHhhhhhHHHHHHHh-hhhhhHHHHHHHHHHHHHHHHHHh---ccCChHhhhhhcCCCC
Confidence 7 899999999999999999 65 2345566665500 02233 6789999
Q ss_pred CCHHHHHHHcCCHHHHHHHHHhhh
Q 002122 832 STPEDYARLRGHYSYIHLVQKKIN 855 (964)
Q Consensus 832 ~TPLh~A~~rGh~svv~LL~~k~a 855 (964)
.||||+|+..||.+++++|.+...
T Consensus 258 ~TPL~~A~~~g~~~l~~lLL~~~~ 281 (743)
T TIGR00870 258 LTPLKLAAKEGRIVLFRLKLAIKY 281 (743)
T ss_pred CCchhhhhhcCCccHHHHHHHHHH
Confidence 999999999999999998887543
|
after chronic exposure to capsaicin. (McCleskey and Gold, 1999). |
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.46 E-value=3e-14 Score=152.44 Aligned_cols=108 Identities=24% Similarity=0.270 Sum_probs=95.7
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHH
Q 002122 731 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDA 810 (964)
Q Consensus 731 ~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~l 810 (964)
+.-|..|||+|++.|+..+|+.||.. |+ ++|..+....||||+||. +||.+||..
T Consensus 31 ddhgfsplhwaakegh~aivemll~r-------ga-----------------rvn~tnmgddtplhlaaa-hghrdivqk 85 (448)
T KOG0195|consen 31 DDHGFSPLHWAAKEGHVAIVEMLLSR-------GA-----------------RVNSTNMGDDTPLHLAAA-HGHRDIVQK 85 (448)
T ss_pred cccCcchhhhhhhcccHHHHHHHHhc-------cc-----------------ccccccCCCCcchhhhhh-cccHHHHHH
Confidence 34588999999999999999999999 88 899999999999999999 999999999
Q ss_pred hhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC---CCCCceeecCC
Q 002122 811 LTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP---NGGHVVVDICG 869 (964)
Q Consensus 811 LL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~---~~~~v~v~ip~ 869 (964)
|+++ .||+|+.++.|.|||||||.-|+..|++-|+..++... .++++.++.+.
T Consensus 86 ll~~------kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkak 141 (448)
T KOG0195|consen 86 LLSR------KADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAK 141 (448)
T ss_pred HHHH------hcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhc
Confidence 9999 99999999999999999999999999999988776432 24555555443
|
|
| >TIGR00870 trp transient-receptor-potential calcium channel protein | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.5e-13 Score=164.11 Aligned_cols=191 Identities=20% Similarity=0.134 Sum_probs=120.5
Q ss_pred cceeecchhhhhHHHHHHHHhhh--cCcchhhhhcCccccHHHH-H-HHHHHHhhhhcccccccccCCCCCCCCCcCccc
Q 002122 616 FPFIVAEEDVCSEIRMLESALEF--NRTDADVERFGKIDTKNQA-M-DFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRR 691 (964)
Q Consensus 616 fP~LVad~~iCsEI~~LE~~le~--~a~~~~~~e~g~~~~h~~a-l-~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R 691 (964)
..++-|.+. +++..+...++. +.+....+..|++++|..| . +.+-.+..|+..+. .+ .-
T Consensus 19 ~~~l~A~~~--g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~-----------~~ 81 (743)
T TIGR00870 19 KAFLPAAER--GDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RG-----------AV 81 (743)
T ss_pred HHHHHHHHc--CCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CC-----------Cc
Confidence 344444333 556666666655 3333223467899999544 3 55566666666553 11 12
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCC-----CCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccC
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE-----HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLG 766 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~-----~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~ 766 (964)
.+++||.|+.. +...+..++..+.+...+.+. .........|.||||+||.+|+.++|++||++ |++
T Consensus 82 G~T~Lh~A~~~-~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~-------GAd 153 (743)
T TIGR00870 82 GDTLLHAISLE-YVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLER-------GAS 153 (743)
T ss_pred ChHHHHHHHhc-cHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhC-------CCC
Confidence 47899999873 344445555444332211100 00011124589999999999999999999999 762
Q ss_pred ccccccccccccccccCCC-cCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcC
Q 002122 767 SENKALVDGVHKGFLFRPD-VIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRG 842 (964)
Q Consensus 767 ~~~~~lv~~a~~~y~fdpn-~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rG 842 (964)
.+.+... ..+..... .....|.||||+||. .|+.+++++|+++ +||+|++|..|+||||+|+..+
T Consensus 154 v~~~~~~----~~~~~~~~~~~~~~g~tpL~~Aa~-~~~~~iv~lLl~~------gadin~~d~~g~T~Lh~A~~~~ 219 (743)
T TIGR00870 154 VPARACG----DFFVKSQGVDSFYHGESPLNAAAC-LGSPSIVALLSED------PADILTADSLGNTLLHLLVMEN 219 (743)
T ss_pred CCcCcCC----chhhcCCCCCcccccccHHHHHHH-hCCHHHHHHHhcC------CcchhhHhhhhhHHHHHHHhhh
Confidence 2100000 00000000 112469999999999 9999999999999 9999999999999999999987
|
after chronic exposure to capsaicin. (McCleskey and Gold, 1999). |
| >PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.6e-13 Score=119.67 Aligned_cols=89 Identities=25% Similarity=0.279 Sum_probs=77.5
Q ss_pred HHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccc
Q 002122 696 IEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDG 775 (964)
Q Consensus 696 L~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~ 775 (964)
||+|+++|+.++++.|++...+ + +. |.||||+|+..|+.+++++|+++ |+
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~----------~--~~-~~~~l~~A~~~~~~~~~~~Ll~~-------g~---------- 50 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGAD----------I--NL-GNTALHYAAENGNLEIVKLLLEN-------GA---------- 50 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTST----------T--TS-SSBHHHHHHHTTTHHHHHHHHHT-------TT----------
T ss_pred CHHHHHcCCHHHHHHHHHCcCC----------C--CC-CCCHHHHHHHcCCHHHHHHHHHh-------cc----------
Confidence 7999999999999999994321 1 11 77999999999999999999999 77
Q ss_pred cccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCC
Q 002122 776 VHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARD 828 (964)
Q Consensus 776 a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD 828 (964)
++|.+|..|+||||+|+. .|+.+++++|+++ |++++.+|
T Consensus 51 -------~~~~~~~~g~t~L~~A~~-~~~~~~~~~Ll~~------g~~~~~~n 89 (89)
T PF12796_consen 51 -------DINSQDKNGNTALHYAAE-NGNLEIVKLLLEH------GADVNIRN 89 (89)
T ss_dssp -------CTT-BSTTSSBHHHHHHH-TTHHHHHHHHHHT------TT-TTSS-
T ss_pred -------cccccCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCcC
Confidence 889999999999999999 9999999999999 99999886
|
These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B .... |
| >KOG0510 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.8e-13 Score=156.96 Aligned_cols=205 Identities=15% Similarity=0.097 Sum_probs=113.4
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHHHHHHHHH-hhhhcccccccccCCCCCCCCCcCccccc
Q 002122 615 FFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQAMDFIHEI-GWLFHRSQSKSRLGHLDPNTDLFPLRRFK 693 (964)
Q Consensus 615 ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~al~fL~EI-GWLLqr~~~~~~~~~~d~~l~l~ql~R~k 693 (964)
..|+++|... +-...|..+++++++....++++.+++|.+|..-=.|. .-|++......+.+ .+..
T Consensus 122 ~aplh~A~~~--~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~-----------~~~~ 188 (929)
T KOG0510|consen 122 NAPLHLAADS--GNYSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSD-----------IDGN 188 (929)
T ss_pred cCchhhcccc--chHHHHHHHHHhcCCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCccc-----------CcCC
Confidence 3455555443 33445566666665444445566666666664222222 22333332111111 1234
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccc
Q 002122 694 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 773 (964)
Q Consensus 694 ~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv 773 (964)
+++|-|+.+|..+..+..|+ +.+...+.+... .+..+.||||.||..|+.++++.+|+. |+.-...+
T Consensus 189 ~~iH~aa~s~s~e~mEi~l~---~~g~~r~~~in~-~~n~~~~pLhlAve~g~~e~lk~~L~n-------~~~~a~~~-- 255 (929)
T KOG0510|consen 189 FPIHEAARSGSKECMEIFLP---EHGYERQTHINF-DNNEKATPLHLAVEGGDIEMLKMCLQN-------GKKIADVQ-- 255 (929)
T ss_pred chHHHHHHhcchhhhhhhhc---cccchhhccccc-ccCCCCcchhhhhhcCCHHHHHHHHhC-------ccccchhh--
Confidence 56666666666666666555 111111111111 133467999999999999999999988 22100000
Q ss_pred cccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 774 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 774 ~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
..+...-.--+|..|.+|.||||+||. +|+.+.++.|+.. ||+++.+++++.||||.|+.+|++..++-|.+
T Consensus 256 ~~~~~q~kelv~~~d~dg~tpLH~a~r-~G~~~svd~Ll~~------Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~ 327 (929)
T KOG0510|consen 256 LDAMQQEKELVNDEDNDGCTPLHYAAR-QGGPESVDNLLGF------GASINSKNKDEESPLHFAAIYGRINTVERLLQ 327 (929)
T ss_pred hHHHHHHHHHhhcccccCCchHHHHHH-cCChhHHHHHHHc------CCcccccCCCCCCchHHHHHcccHHHHHHHHh
Confidence 000000011245667777777777777 7777777777777 77777777777777777777766666664444
|
|
| >PHA02741 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.1e-13 Score=133.00 Aligned_cols=101 Identities=20% Similarity=0.157 Sum_probs=84.5
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCC----HH
Q 002122 731 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS----ED 806 (964)
Q Consensus 731 ~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~----~d 806 (964)
+..|.|+||+|++.|+.++|++|+..... ...|+ +++.+|..|.||||+|+. .|+ .+
T Consensus 18 ~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~-~~~ga-----------------~in~~d~~g~T~Lh~A~~-~g~~~~~~~ 78 (169)
T PHA02741 18 NSEGENFFHEAARCGCFDIIARFTPFIRG-DCHAA-----------------ALNATDDAGQMCIHIAAE-KHEAQLAAE 78 (169)
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHHHhcc-chhhh-----------------hhhccCCCCCcHHHHHHH-cCChHHHHH
Confidence 44588999999999999999998754100 00133 678899999999999999 888 58
Q ss_pred HHHHhhcCCCCCccccccccCCC-CCCCHHHHHHHcCCHHHHHHHHHh-hhc
Q 002122 807 VLDALTDDPGMVGIEAWKNARDS-SGSTPEDYARLRGHYSYIHLVQKK-INK 856 (964)
Q Consensus 807 VV~lLL~~p~~vg~gAdinarD~-~G~TPLh~A~~rGh~svv~LL~~k-~ak 856 (964)
++++|+++ |+++|.+|. +|.||||+|+..++.+++++|..+ +++
T Consensus 79 ii~~Ll~~------gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~ 124 (169)
T PHA02741 79 IIDHLIEL------GADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGID 124 (169)
T ss_pred HHHHHHHc------CCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCC
Confidence 99999999 999999995 999999999999999999999863 544
|
|
| >KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription] | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.1e-13 Score=133.66 Aligned_cols=120 Identities=23% Similarity=0.173 Sum_probs=102.7
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccc
Q 002122 694 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 773 (964)
Q Consensus 694 ~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv 773 (964)
.++..|++.+-...|+.||..-++ .+ ..++.+|.||||+|+-+|+.+||+.||.+ ||
T Consensus 65 rl~lwaae~nrl~eV~~lL~e~an-~v-------NtrD~D~YTpLHRAaYn~h~div~~ll~~-------gA-------- 121 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTEVQRLLSEKAN-HV-------NTRDEDEYTPLHRAAYNGHLDIVHELLLS-------GA-------- 121 (228)
T ss_pred HHHHHHHhhccHHHHHHHHHhccc-cc-------cccccccccHHHHHHhcCchHHHHHHHHc-------cC--------
Confidence 577889999999999999983221 11 12467799999999999999999999999 88
Q ss_pred cccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCC-HHHHHHHHH
Q 002122 774 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGH-YSYIHLVQK 852 (964)
Q Consensus 774 ~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh-~svv~LL~~ 852 (964)
+++++...|+||||-|+. -.+.+|+..|+.+ |||+|+....-+||||+|+...+ ...+++|..
T Consensus 122 ---------n~~a~T~~GWTPLhSAck-WnN~~va~~LLqh------gaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~ 185 (228)
T KOG0512|consen 122 ---------NKEAKTNEGWTPLHSACK-WNNFEVAGRLLQH------GADVNAQTKGLLTPLHLAAGNRNSRDTLELLLH 185 (228)
T ss_pred ---------CcccccccCccchhhhhc-ccchhHHHHHHhc------cCcccccccccchhhHHhhcccchHHHHHHHhh
Confidence 899999999999999999 9999999999999 99999999999999999997654 455666554
|
|
| >KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.39 E-value=6e-13 Score=138.58 Aligned_cols=124 Identities=23% Similarity=0.126 Sum_probs=102.5
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
+.-+||++|+.+|+..+|++||+.+++.. + ..+...++|.+|++.|..+||++||.. +.
T Consensus 159 ~GfTpLiWAaa~G~i~vV~fLL~~GAdp~--------~-lgk~resALsLAt~ggytdiV~lLL~r-------~v----- 217 (296)
T KOG0502|consen 159 FGFTPLIWAAAKGHIPVVQFLLNSGADPD--------A-LGKYRESALSLATRGGYTDIVELLLTR-------EV----- 217 (296)
T ss_pred cCchHhHHHHhcCchHHHHHHHHcCCChh--------h-hhhhhhhhHhHHhcCChHHHHHHHHhc-------CC-----
Confidence 34679999999999999999998654321 1 122334899999999999999999988 44
Q ss_pred ccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 002122 771 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 850 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL 850 (964)
++|.-|-+|.|||-+|+. .++.++|+.|++. ||+++..|..|+++++.|..-|+. +|+++
T Consensus 218 ------------dVNvyDwNGgTpLlyAvr-gnhvkcve~Ll~s------GAd~t~e~dsGy~~mdlAValGyr-~Vqqv 277 (296)
T KOG0502|consen 218 ------------DVNVYDWNGGTPLLYAVR-GNHVKCVESLLNS------GADVTQEDDSGYWIMDLAVALGYR-IVQQV 277 (296)
T ss_pred ------------CcceeccCCCceeeeeec-CChHHHHHHHHhc------CCCcccccccCCcHHHHHHHhhhH-HHHHH
Confidence 788899999999999999 9999999999999 999999999999999999999988 66666
Q ss_pred HHhhh
Q 002122 851 QKKIN 855 (964)
Q Consensus 851 ~~k~a 855 (964)
++|-+
T Consensus 278 ie~h~ 282 (296)
T KOG0502|consen 278 IEKHA 282 (296)
T ss_pred HHHHH
Confidence 55543
|
|
| >cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Probab=99.37 E-value=9.8e-12 Score=113.12 Aligned_cols=120 Identities=29% Similarity=0.298 Sum_probs=105.2
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
...++|++|+..++.++++.|++...+. ...+..|.++||.|+..++.+++++|++. |+
T Consensus 6 ~g~t~l~~a~~~~~~~~i~~li~~~~~~---------~~~~~~g~~~l~~a~~~~~~~~~~~ll~~-------~~----- 64 (126)
T cd00204 6 DGRTPLHLAASNGHLEVVKLLLENGADV---------NAKDNDGRTPLHLAAKNGHLEIVKLLLEK-------GA----- 64 (126)
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCC---------CccCCCCCcHHHHHHHcCCHHHHHHHHHc-------CC-----
Confidence 3578999999999999999999864321 12355688999999999999999999999 54
Q ss_pred ccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 002122 771 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 850 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL 850 (964)
.++..+..|.||+|+|+. .++.+++++|++. +.+.+..|..|.||+++|...++.+++++|
T Consensus 65 ------------~~~~~~~~~~~~l~~a~~-~~~~~~~~~L~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L 125 (126)
T cd00204 65 ------------DVNARDKDGNTPLHLAAR-NGNLDVVKLLLKH------GADVNARDKDGRTPLHLAAKNGHLEVVKLL 125 (126)
T ss_pred ------------CccccCCCCCCHHHHHHH-cCcHHHHHHHHHc------CCCCcccCCCCCCHHHHHHhcCCHHHHHHh
Confidence 567777899999999999 9999999999999 888999999999999999999999999887
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. |
| >PHA02730 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.2e-12 Score=153.01 Aligned_cols=128 Identities=12% Similarity=0.004 Sum_probs=105.4
Q ss_pred cchHHHHHHHcCc----hHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHH---HHHcC---------CHHHHHHHhc
Q 002122 692 FKWLIEFSMDHEW----CAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHR---AVRKN---------SRPLVDLLLR 755 (964)
Q Consensus 692 ~k~lL~fAve~g~----~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~---AVr~g---------~~e~VelLL~ 755 (964)
.++|||+|+..++ .++|++||..+++..++ ..+..|.||||. |...+ ..+++++||.
T Consensus 378 G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN-------~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs 450 (672)
T PHA02730 378 NNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAIN-------HVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSK 450 (672)
T ss_pred CCcHHHHHHHHcCCcchHHHHHHHHHcCCCcccc-------ccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHh
Confidence 4789999988875 89999999965421111 134568899994 43332 2357999999
Q ss_pred cCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCC-CCCCH
Q 002122 756 FVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDS-SGSTP 834 (964)
Q Consensus 756 ~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~-~G~TP 834 (964)
+ |+ ++|.+|..|.||||+||. .++.+++++|+++ ||++|++|. .|.||
T Consensus 451 ~-------GA-----------------DINakD~~G~TPLh~Aa~-~~~~eive~LI~~------GAdIN~~d~~~g~Ta 499 (672)
T PHA02730 451 Y-------MD-----------------DIDMIDNENKTLLYYAVD-VNNIQFARRLLEY------GASVNTTSRSIINTA 499 (672)
T ss_pred c-------cc-----------------chhccCCCCCCHHHHHHH-hCCHHHHHHHHHC------CCCCCCCCCcCCcCH
Confidence 9 88 899999999999999999 9999999999999 999999997 59999
Q ss_pred HHHHHHc--CCHHHHHHHHHhhhcC
Q 002122 835 EDYARLR--GHYSYIHLVQKKINKR 857 (964)
Q Consensus 835 Lh~A~~r--Gh~svv~LL~~k~ak~ 857 (964)
||+|+.+ ++.+++++|.+++++.
T Consensus 500 L~~Aa~~~~~~~eIv~~LLs~ga~i 524 (672)
T PHA02730 500 IQKSSYRRENKTKLVDLLLSYHPTL 524 (672)
T ss_pred HHHHHHhhcCcHHHHHHHHHcCCCH
Confidence 9999984 7999999999987754
|
|
| >PHA02743 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=5.1e-12 Score=127.32 Aligned_cols=103 Identities=18% Similarity=0.098 Sum_probs=86.9
Q ss_pred ccchHHHHHHHcCchHH---HHHHhhhhccCcccCCCCCchhhc-cCCCcHHHHHHHcCCHHHHHHHhc-cCCCcccccc
Q 002122 691 RFKWLIEFSMDHEWCAV---VKKLLHILLDGTVSLGEHPSLDLA-LTELGLLHRAVRKNSRPLVDLLLR-FVPLEVSDRL 765 (964)
Q Consensus 691 R~k~lL~fAve~g~~aV---Vk~LL~~l~d~~vd~g~~~~le~~-l~G~TpLH~AVr~g~~e~VelLL~-~~p~~~~dGa 765 (964)
..+++||+|+..|+.++ +++|+..+++.+. .+ ..|.||||+|+..++.+++++|+. . |+
T Consensus 56 ~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~---------~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~-------ga 119 (166)
T PHA02743 56 HGRQCTHMVAWYDRANAVMKIELLVNMGADINA---------RELGTGNTLLHIAASTKNYELAEWLCRQL-------GV 119 (166)
T ss_pred CCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC---------CCCCCCCcHHHHHHHhCCHHHHHHHHhcc-------CC
Confidence 35889999999987654 7888886543221 23 358899999999999999999995 6 66
Q ss_pred CccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCC
Q 002122 766 GSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGST 833 (964)
Q Consensus 766 ~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~T 833 (964)
+++.++..|.||||+|+. .++.+++++|+++ ||+++.+|..|..
T Consensus 120 -----------------d~~~~d~~g~tpL~~A~~-~~~~~iv~~Ll~~------ga~~~~~~~~~~~ 163 (166)
T PHA02743 120 -----------------NLGAINYQHETAYHIAYK-MRDRRMMEILRAN------GAVCDDPLSIGLS 163 (166)
T ss_pred -----------------CccCcCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCcccCCcc
Confidence 889999999999999999 9999999999999 9999999988864
|
|
| >KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.35 E-value=9.2e-13 Score=137.22 Aligned_cols=123 Identities=22% Similarity=0.228 Sum_probs=111.5
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccc
Q 002122 694 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 773 (964)
Q Consensus 694 ~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv 773 (964)
.++.+|+...|.+++..|.+..++ ..+..|.|||.+|+++|+.++|++||.+ |+
T Consensus 131 s~~slsVhql~L~~~~~~~~n~VN-----------~~De~GfTpLiWAaa~G~i~vV~fLL~~-------GA-------- 184 (296)
T KOG0502|consen 131 SPLSLSVHQLHLDVVDLLVNNKVN-----------ACDEFGFTPLIWAAAKGHIPVVQFLLNS-------GA-------- 184 (296)
T ss_pred ChhhHHHHHHHHHHHHHHhhcccc-----------CccccCchHhHHHHhcCchHHHHHHHHc-------CC--------
Confidence 588999999999998877774432 1255699999999999999999999999 99
Q ss_pred cccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 002122 774 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKK 853 (964)
Q Consensus 774 ~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k 853 (964)
+|++.++...|+|.+|.. .|..+||++|++. +.|+|.-|-+|-|||-||++.||.++++.|+..
T Consensus 185 ---------dp~~lgk~resALsLAt~-ggytdiV~lLL~r------~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~s 248 (296)
T KOG0502|consen 185 ---------DPDALGKYRESALSLATR-GGYTDIVELLLTR------EVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNS 248 (296)
T ss_pred ---------ChhhhhhhhhhhHhHHhc-CChHHHHHHHHhc------CCCcceeccCCCceeeeeecCChHHHHHHHHhc
Confidence 999999999999999999 9999999999999 999999999999999999999999999999999
Q ss_pred hhcCC
Q 002122 854 INKRP 858 (964)
Q Consensus 854 ~ak~~ 858 (964)
+++..
T Consensus 249 GAd~t 253 (296)
T KOG0502|consen 249 GADVT 253 (296)
T ss_pred CCCcc
Confidence 98753
|
|
| >COG0666 Arp FOG: Ankyrin repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.6e-11 Score=122.03 Aligned_cols=126 Identities=25% Similarity=0.190 Sum_probs=109.9
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCC-----HHHHHHHhccCCCccccccC
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNS-----RPLVDLLLRFVPLEVSDRLG 766 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~-----~e~VelLL~~~p~~~~dGa~ 766 (964)
...+++.++..+...+++.|+...++. ...+..|.|+||+|+..++ .+++++||+. |+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~-------g~~ 136 (235)
T COG0666 73 GRLPLHSAASKGDDKIVKLLLASGADV---------NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEA-------GAD 136 (235)
T ss_pred ccCHHHHHHHcCcHHHHHHHHHcCCCc---------ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHc-------CCC
Confidence 467999999999999999988855432 2246679999999999999 9999999999 540
Q ss_pred ccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHH
Q 002122 767 SENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSY 846 (964)
Q Consensus 767 ~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~sv 846 (964)
...++..|..|.||||+|+. .|+.+++++|++. +++++.+|..|.||+++|+..++.++
T Consensus 137 --------------~~~~~~~~~~g~tpl~~A~~-~~~~~~~~~ll~~------~~~~~~~~~~g~t~l~~a~~~~~~~~ 195 (235)
T COG0666 137 --------------LDVNNLRDEDGNTPLHWAAL-NGDADIVELLLEA------GADPNSRNSYGVTALDPAAKNGRIEL 195 (235)
T ss_pred --------------CCCccccCCCCCchhHHHHH-cCchHHHHHHHhc------CCCCcccccCCCcchhhhcccchHHH
Confidence 01456679999999999999 9999999999999 99999999999999999999999999
Q ss_pred HHHHHHhh
Q 002122 847 IHLVQKKI 854 (964)
Q Consensus 847 v~LL~~k~ 854 (964)
++++.+++
T Consensus 196 ~~~l~~~~ 203 (235)
T COG0666 196 VKLLLDKG 203 (235)
T ss_pred HHHHHhcC
Confidence 99999976
|
|
| >PHA02730 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.4e-11 Score=145.63 Aligned_cols=202 Identities=15% Similarity=0.118 Sum_probs=142.3
Q ss_pred CCcceeecchhhh-hHHHHHHHHhhhcCcchhhhhcCccccHHHHH-H--HHHHHhhhhcccccccccCCCCCCCCCcCc
Q 002122 614 TFFPFIVAEEDVC-SEIRMLESALEFNRTDADVERFGKIDTKNQAM-D--FIHEIGWLFHRSQSKSRLGHLDPNTDLFPL 689 (964)
Q Consensus 614 ~ffP~LVad~~iC-sEI~~LE~~le~~a~~~~~~e~g~~~~h~~al-~--fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql 689 (964)
+-.|++.|...-+ .....+|.+++.|+...+.+..|.+++|.++. + ....+..|+..+.-.+.-+ .+ ..
T Consensus 41 G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~-~~-~~----- 113 (672)
T PHA02730 41 GNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNEL-TS-NI----- 113 (672)
T ss_pred CCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCccc-cc-cc-----
Confidence 4788888764432 35778999999999888778889999998874 3 5667777777753211110 10 01
Q ss_pred cccchHHHHHH--HcCchHHHHHHhh-hhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccC
Q 002122 690 RRFKWLIEFSM--DHEWCAVVKKLLH-ILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLG 766 (964)
Q Consensus 690 ~R~k~lL~fAv--e~g~~aVVk~LL~-~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~ 766 (964)
.-++|+.++ ++++.++|++||. ..++.+ ........-.|.+|++.|+..++.+||++||++ |+.
T Consensus 114 --~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~----~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~-------g~~ 180 (672)
T PHA02730 114 --NDFDLYSYMSSDNIDLRLLKYLIVDKRIRPS----KNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKS-------ECY 180 (672)
T ss_pred --CCchHHHHHHhcCCcHHHHHHHHHhcCCChh----hhhhhhccccchhhhhHhcCCCchHHHHHHHHc-------CCc
Confidence 123555554 4899999999996 222211 110000112578999999999999999999999 662
Q ss_pred ccccccccccccccccCCCcCCCCCC-hHHHHH------HhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHH--
Q 002122 767 SENKALVDGVHKGFLFRPDVIGPAGL-TPIHIA------AGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDY-- 837 (964)
Q Consensus 767 ~~~~~lv~~a~~~y~fdpn~~d~~G~-TPLHiA------A~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~-- 837 (964)
.-||.|+.+..+..+. |.||++ +. .++.+|+++|+++ ||++|++|..|.||||+
T Consensus 181 ----------v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~-~n~~eiv~lLIs~------GadIN~kd~~G~TpLh~~~ 243 (672)
T PHA02730 181 ----------STGYVFRSCMYDSDRCKNSLHYYILSHRESE-SLSKDVIKCLIDN------NVSIHGRDEGGSLPIQYYW 243 (672)
T ss_pred ----------ccccccccccccCCccchhHHHHHHhhhhhh-ccCHHHHHHHHHC------CCCCCCCCCCCCCHHHHHH
Confidence 2356665554444454 566633 44 7899999999999 99999999999999995
Q ss_pred HHHcCCHHHHHHHHH
Q 002122 838 ARLRGHYSYIHLVQK 852 (964)
Q Consensus 838 A~~rGh~svv~LL~~ 852 (964)
|...||.+++++|.+
T Consensus 244 ~~~~~~~eiv~~Li~ 258 (672)
T PHA02730 244 SCSTIDIEIVKLLIK 258 (672)
T ss_pred HcCcccHHHHHHHHh
Confidence 555688999999998
|
|
| >PHA02884 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.8e-11 Score=135.15 Aligned_cols=95 Identities=15% Similarity=0.163 Sum_probs=85.4
Q ss_pred CCC-cHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcC----CCCCChHHHHHHhhCCCHHH
Q 002122 733 TEL-GLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVI----GPAGLTPIHIAAGKDGSEDV 807 (964)
Q Consensus 733 ~G~-TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~----d~~G~TPLHiAA~~~G~~dV 807 (964)
.+. ++||.|++.|+.++|++||++ |+ ++|.. +..|.||||+||. .|+.++
T Consensus 31 ~~~~~lL~~A~~~~~~eivk~LL~~-------GA-----------------diN~~~~~sd~~g~TpLh~Aa~-~~~~ei 85 (300)
T PHA02884 31 ICIANILYSSIKFHYTDIIDAILKL-------GA-----------------DPEAPFPLSENSKTNPLIYAID-CDNDDA 85 (300)
T ss_pred CCCCHHHHHHHHcCCHHHHHHHHHC-------CC-----------------CccccCcccCCCCCCHHHHHHH-cCCHHH
Confidence 344 578889999999999999999 88 78876 4589999999999 999999
Q ss_pred HHHhhcCCCCCccccccccCC-CCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 808 LDALTDDPGMVGIEAWKNARD-SSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 808 V~lLL~~p~~vg~gAdinarD-~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
+++|+++ ||++|+++ ..|.||||+|+..|+.+++++|..++++..
T Consensus 86 vklLL~~------GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin 131 (300)
T PHA02884 86 AKLLIRY------GADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADIN 131 (300)
T ss_pred HHHHHHc------CCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 9999999 99999975 689999999999999999999999988654
|
|
| >KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.9e-11 Score=140.19 Aligned_cols=202 Identities=17% Similarity=0.138 Sum_probs=142.8
Q ss_pred hHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCch
Q 002122 627 SEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWC 705 (964)
Q Consensus 627 sEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~ 705 (964)
++...-+.++..++.+...+.+|.+++|+.| .+++-.|-+|+.........+ ..+++|||-|+..+|.
T Consensus 51 ~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d-----------~e~wtPlhaaascg~~ 119 (527)
T KOG0505|consen 51 GDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQD-----------NEGWTPLHAAASCGYL 119 (527)
T ss_pred ccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccc-----------cccCCcchhhcccccH
Confidence 4555666777777777666789999999998 488888888888886544333 2468899999999999
Q ss_pred HHHHHHhhhhccCc-ccC--CCCCchhhccCCCcHHHH----------HHHcC-CHHHHH---HHhccCCCccccccCcc
Q 002122 706 AVVKKLLHILLDGT-VSL--GEHPSLDLALTELGLLHR----------AVRKN-SRPLVD---LLLRFVPLEVSDRLGSE 768 (964)
Q Consensus 706 aVVk~LL~~l~d~~-vd~--g~~~~le~~l~G~TpLH~----------AVr~g-~~e~Ve---lLL~~~p~~~~dGa~~~ 768 (964)
+++++|+.++++.. ++. +-..++-.+..+.+.|-. |+++- ...|++ ..+.. |.
T Consensus 120 ~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~-------G~--- 189 (527)
T KOG0505|consen 120 NIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNA-------GA--- 189 (527)
T ss_pred HHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhc-------cc---
Confidence 99999999887633 221 111111011111122222 22221 111221 22223 44
Q ss_pred ccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHH
Q 002122 769 NKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIH 848 (964)
Q Consensus 769 ~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~ 848 (964)
..++.+..|.|+||+||. .|..++.++|+++ |.+++++|.+|+||||.|+.-|+.++++
T Consensus 190 --------------~~d~~~~rG~T~lHvAaa-~Gy~e~~~lLl~a------g~~~~~~D~dgWtPlHAAA~Wg~~~~~e 248 (527)
T KOG0505|consen 190 --------------ELDARHARGATALHVAAA-NGYTEVAALLLQA------GYSVNIKDYDGWTPLHAAAHWGQEDACE 248 (527)
T ss_pred --------------cccccccccchHHHHHHh-hhHHHHHHHHHHh------ccCcccccccCCCcccHHHHhhhHhHHH
Confidence 667777789999999999 9999999999999 9999999999999999999999999999
Q ss_pred HHHHhhhcCCC---CCCceeecCCC
Q 002122 849 LVQKKINKRPN---GGHVVVDICGV 870 (964)
Q Consensus 849 LL~~k~ak~~~---~~~v~v~ip~~ 870 (964)
+|..++++... .+++.+++..+
T Consensus 249 lL~~~ga~~d~~t~~g~~p~dv~de 273 (527)
T KOG0505|consen 249 LLVEHGADMDAKTKMGETPLDVADE 273 (527)
T ss_pred HHHHhhcccchhhhcCCCCccchhh
Confidence 99999886543 44555555443
|
|
| >KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.25 E-value=7.1e-12 Score=147.64 Aligned_cols=121 Identities=22% Similarity=0.169 Sum_probs=108.6
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
-++||.|+-+|+..++++||++- ....+ .+..|++|||+|+..|+.++|++||.. +.
T Consensus 50 fTalhha~Lng~~~is~llle~e--------a~ldl-~d~kg~~plhlaaw~g~~e~vkmll~q-------~d------- 106 (854)
T KOG0507|consen 50 FTLLHHAVLNGQNQISKLLLDYE--------ALLDL-CDTKGILPLHLAAWNGNLEIVKMLLLQ-------TD------- 106 (854)
T ss_pred hhHHHHHHhcCchHHHHHHhcch--------hhhhh-hhccCcceEEehhhcCcchHHHHHHhc-------cc-------
Confidence 47999999999999999999842 12222 236699999999999999999999998 43
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
.+|+....|.||||+||+ +||.+|+.+|+.+ +|+.-.+|..+.|+|+.|++-|...++++|.+
T Consensus 107 ----------~~na~~~e~~tplhlaaq-hgh~dvv~~Ll~~------~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~ 169 (854)
T KOG0507|consen 107 ----------ILNAVNIENETPLHLAAQ-HGHLEVVFYLLKK------NADPFIRNNSKETVLDLASRFGRAEVVQMLLQ 169 (854)
T ss_pred ----------CCCcccccCcCccchhhh-hcchHHHHHHHhc------CCCccccCcccccHHHHHHHhhhhHHHHHHhh
Confidence 678899999999999999 9999999999999 99999999999999999999999999999988
Q ss_pred h
Q 002122 853 K 853 (964)
Q Consensus 853 k 853 (964)
+
T Consensus 170 ~ 170 (854)
T KOG0507|consen 170 K 170 (854)
T ss_pred h
Confidence 7
|
|
| >KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription] | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.1e-11 Score=123.61 Aligned_cols=140 Identities=20% Similarity=0.170 Sum_probs=111.6
Q ss_pred HHHHHHhhhhccccc-ccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcH
Q 002122 659 DFIHEIGWLFHRSQS-KSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGL 737 (964)
Q Consensus 659 ~fL~EIGWLLqr~~~-~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~Tp 737 (964)
+-|.++..||.-... ...++.- .-+|||-|+.+||.+||+.||..+++... +...|+||
T Consensus 74 nrl~eV~~lL~e~an~vNtrD~D-----------~YTpLHRAaYn~h~div~~ll~~gAn~~a---------~T~~GWTP 133 (228)
T KOG0512|consen 74 NRLTEVQRLLSEKANHVNTRDED-----------EYTPLHRAAYNGHLDIVHELLLSGANKEA---------KTNEGWTP 133 (228)
T ss_pred ccHHHHHHHHHhccccccccccc-----------cccHHHHHHhcCchHHHHHHHHccCCccc---------ccccCccc
Confidence 556677777665532 2222211 35799999999999999999987654221 34569999
Q ss_pred HHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCC
Q 002122 738 LHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGM 817 (964)
Q Consensus 738 LH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~ 817 (964)
||.||+-++.+++.+||.+ |+ ++|+...+..||||+||...+..+.+.+|+.++
T Consensus 134 LhSAckWnN~~va~~LLqh-------ga-----------------DVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dr-- 187 (228)
T KOG0512|consen 134 LHSACKWNNFEVAGRLLQH-------GA-----------------DVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDR-- 187 (228)
T ss_pred hhhhhcccchhHHHHHHhc-------cC-----------------cccccccccchhhHHhhcccchHHHHHHHhhcc--
Confidence 9999999999999999999 88 899999999999999999777888899999886
Q ss_pred CccccccccCCCCCCCHHHHHHHcCCHHHH
Q 002122 818 VGIEAWKNARDSSGSTPEDYARLRGHYSYI 847 (964)
Q Consensus 818 vg~gAdinarD~~G~TPLh~A~~rGh~svv 847 (964)
+..+-.++..+.||+++|++.+-..++
T Consensus 188 ---yi~pg~~nn~eeta~~iARRT~~s~~l 214 (228)
T KOG0512|consen 188 ---YIHPGLKNNLEETAFDIARRTSMSHYL 214 (228)
T ss_pred ---ccChhhhcCccchHHHHHHHhhhhHHH
Confidence 566677888999999999988654443
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.2e-11 Score=132.74 Aligned_cols=109 Identities=23% Similarity=0.212 Sum_probs=94.9
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
-.|||+|+..|+.++|..||..++-.++ .+...-||||+|+..|+.++|+.||.+ .+
T Consensus 35 fsplhwaakegh~aivemll~rgarvn~---------tnmgddtplhlaaahghrdivqkll~~-------ka------- 91 (448)
T KOG0195|consen 35 FSPLHWAAKEGHVAIVEMLLSRGARVNS---------TNMGDDTPLHLAAAHGHRDIVQKLLSR-------KA------- 91 (448)
T ss_pred cchhhhhhhcccHHHHHHHHhccccccc---------ccCCCCcchhhhhhcccHHHHHHHHHH-------hc-------
Confidence 4699999999999999999986543221 133345999999999999999999999 45
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHc
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLR 841 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~r 841 (964)
++|+.+..|.||||+|+- -|...|.+-|+.. ||-++..++.|.|||+.|.-.
T Consensus 92 ----------dvnavnehgntplhyacf-wgydqiaedli~~------ga~v~icnk~g~tpldkakp~ 143 (448)
T KOG0195|consen 92 ----------DVNAVNEHGNTPLHYACF-WGYDQIAEDLISC------GAAVNICNKKGMTPLDKAKPM 143 (448)
T ss_pred ----------ccchhhccCCCchhhhhh-hcHHHHHHHHHhc------cceeeecccCCCCchhhhchH
Confidence 889999999999999998 9999999999999 999999999999999998643
|
|
| >PHA02792 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.4e-11 Score=142.29 Aligned_cols=146 Identities=13% Similarity=0.016 Sum_probs=111.3
Q ss_pred cHHHHHHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhcc
Q 002122 653 TKNQAMDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLAL 732 (964)
Q Consensus 653 ~h~~al~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l 732 (964)
.+.++.+||.+-|.-..+. . ....++.|+..++.++|++|++.+++.+.. + ...
T Consensus 319 v~ieiIK~LId~Ga~~~r~------~-------------~~n~~~~Aa~~gn~eIVelLIs~GADIN~k----D---~~g 372 (631)
T PHA02792 319 VYINVIKCMIDEGATLYRF------K-------------HINKYFQKFDNRDPKVVEYILKNGNVVVED----D---DNI 372 (631)
T ss_pred ccHHHHHHHHHCCCccccC------C-------------cchHHHHHHHcCCHHHHHHHHHcCCchhhh----c---CCC
Confidence 4557778888877653221 1 123578899999999999999976653211 0 111
Q ss_pred CCCcHHHHHHHcCCHH---HHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHH
Q 002122 733 TELGLLHRAVRKNSRP---LVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLD 809 (964)
Q Consensus 733 ~G~TpLH~AVr~g~~e---~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~ 809 (964)
.+.||||.|+..+..+ ++++|+.+ |+ ++|.+|..|.||||+|+. .++.++++
T Consensus 373 ~~~TpLh~A~~n~~~~v~~IlklLIs~-------GA-----------------DIN~kD~~G~TPLh~Aa~-~~n~eive 427 (631)
T PHA02792 373 INIMPLFPTLSIHESDVLSILKLCKPY-------ID-----------------DINKIDKHGRSILYYCIE-SHSVSLVE 427 (631)
T ss_pred CChhHHHHHHHhccHhHHHHHHHHHhc-------CC-----------------ccccccccCcchHHHHHH-cCCHHHHH
Confidence 2469999988776654 57888999 88 899999999999999999 99999999
Q ss_pred HhhcCCCCCccccccccCCCCCCCHHHHHHH---cCC-------HHHHHHHHHhhh
Q 002122 810 ALTDDPGMVGIEAWKNARDSSGSTPEDYARL---RGH-------YSYIHLVQKKIN 855 (964)
Q Consensus 810 lLL~~p~~vg~gAdinarD~~G~TPLh~A~~---rGh-------~svv~LL~~k~a 855 (964)
+|+++ ||++|.+|..|.||||+|.. +++ .+++++|++++.
T Consensus 428 lLLs~------GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p 477 (631)
T PHA02792 428 WLIDN------GADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLP 477 (631)
T ss_pred HHHHC------CCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCC
Confidence 99999 99999999999999999976 333 344556655553
|
|
| >KOG0514 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.23 E-value=7.7e-12 Score=137.80 Aligned_cols=116 Identities=23% Similarity=0.220 Sum_probs=86.7
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccccccc------cc--cc---cc---CCCcCC-CCCChHH
Q 002122 731 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGV------HK--GF---LF---RPDVIG-PAGLTPI 795 (964)
Q Consensus 731 ~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a------~~--~y---~f---dpn~~d-~~G~TPL 795 (964)
+-.|.|+|||||...+.++|+.||+....+-..-.-.+-+|++..+ .. .. +| ++|++- ..|.|+|
T Consensus 265 DsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQTAL 344 (452)
T KOG0514|consen 265 DSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQTAL 344 (452)
T ss_pred cCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcchhh
Confidence 4568999999999999999999999853321000000011111110 00 00 12 456554 4799999
Q ss_pred HHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 002122 796 HIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKK 853 (964)
Q Consensus 796 HiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k 853 (964)
++|++ +|..++|++||.. |||+|.+|.+|.|+|.+|++.||.+|+++|...
T Consensus 345 MLAVS-HGr~d~vk~LLac------gAdVNiQDdDGSTALMCA~EHGhkEivklLLA~ 395 (452)
T KOG0514|consen 345 MLAVS-HGRVDMVKALLAC------GADVNIQDDDGSTALMCAAEHGHKEIVKLLLAV 395 (452)
T ss_pred hhhhh-cCcHHHHHHHHHc------cCCCccccCCccHHHhhhhhhChHHHHHHHhcc
Confidence 99999 9999999999999 999999999999999999999999999998864
|
|
| >PHA02736 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.1e-11 Score=122.30 Aligned_cols=101 Identities=19% Similarity=0.141 Sum_probs=76.1
Q ss_pred hccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCH---H
Q 002122 730 LALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSE---D 806 (964)
Q Consensus 730 ~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~---d 806 (964)
.+..|.||||+||+.|+ ++++|+.. +... .......+..|..|.||||+|+. .|+. +
T Consensus 13 ~d~~g~tpLh~A~~~g~--~~~l~~~~-------~~~~----------~~~~~~~~~~d~~g~t~Lh~a~~-~~~~~~~e 72 (154)
T PHA02736 13 PDIEGENILHYLCRNGG--VTDLLAFK-------NAIS----------DENRYLVLEYNRHGKQCVHIVSN-PDKADPQE 72 (154)
T ss_pred cCCCCCCHHHHHHHhCC--HHHHHHHH-------HHhc----------chhHHHHHHhcCCCCEEEEeecc-cCchhHHH
Confidence 35569999999999998 44554432 1100 00001234568899999999999 8876 4
Q ss_pred HHHHhhcCCCCCccccccccCC-CCCCCHHHHHHHcCCHHHHHHHHHh-hhc
Q 002122 807 VLDALTDDPGMVGIEAWKNARD-SSGSTPEDYARLRGHYSYIHLVQKK-INK 856 (964)
Q Consensus 807 VV~lLL~~p~~vg~gAdinarD-~~G~TPLh~A~~rGh~svv~LL~~k-~ak 856 (964)
++++|+++ |+++|.+| ..|.||||+|+..|+.+++++|..+ +++
T Consensus 73 ~v~~Ll~~------gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d 118 (154)
T PHA02736 73 KLKLLMEW------GADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVN 118 (154)
T ss_pred HHHHHHHc------CCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 68899999 99999998 5999999999999999999999864 443
|
|
| >cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.9e-10 Score=104.65 Aligned_cols=93 Identities=29% Similarity=0.351 Sum_probs=85.4
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHH
Q 002122 731 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDA 810 (964)
Q Consensus 731 ~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~l 810 (964)
+..|.||||+|++.++.+++++|++. |. +.+..+..|.||||+|+. .+..+++++
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~-------~~-----------------~~~~~~~~g~~~l~~a~~-~~~~~~~~~ 58 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLEN-------GA-----------------DVNAKDNDGRTPLHLAAK-NGHLEIVKL 58 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHc-------CC-----------------CCCccCCCCCcHHHHHHH-cCCHHHHHH
Confidence 34588999999999999999999999 54 447788899999999999 899999999
Q ss_pred hhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 002122 811 LTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKI 854 (964)
Q Consensus 811 LL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ 854 (964)
|+++ +++++..|..|.||+|+|+..++.+++++|.+++
T Consensus 59 ll~~------~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~ 96 (126)
T cd00204 59 LLEK------GADVNARDKDGNTPLHLAARNGNLDVVKLLLKHG 96 (126)
T ss_pred HHHc------CCCccccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 9999 8899999999999999999999999999999876
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. |
| >PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.4e-11 Score=98.38 Aligned_cols=54 Identities=33% Similarity=0.527 Sum_probs=46.3
Q ss_pred CChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 791 GLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 791 G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
|+||||.||. .|+.+++++|+++ ++++|.+|.+|.||||+|+.+||.+++++|.
T Consensus 1 g~t~lh~A~~-~g~~~~~~~Ll~~------~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAAR-SGNLEIVKLLLEH------GADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHH-TT-HHHHHHHHHT------TSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHH-hCCHHHHHHHHHC------CCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 7899999999 9999999999999 9999999999999999999999999999874
|
... |
| >PHA02792 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.2e-10 Score=138.75 Aligned_cols=136 Identities=15% Similarity=0.009 Sum_probs=106.1
Q ss_pred HHH-HHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHH-cCCHHHHHHHhccCCCccccccCcc----
Q 002122 695 LIE-FSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVR-KNSRPLVDLLLRFVPLEVSDRLGSE---- 768 (964)
Q Consensus 695 lL~-fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr-~g~~e~VelLL~~~p~~~~dGa~~~---- 768 (964)
++| +|..+++.++|+.|+..+++.+. .+..+.||||+|+. .++.++|++||.. ||+..
T Consensus 74 ~~~~~~s~n~~lElvk~LI~~GAdvN~---------~~n~~~~~l~ya~~~~~~~eivk~Ll~~-------Gad~~~~~~ 137 (631)
T PHA02792 74 IFEYLCSDNIDIELLKLLISKGLEINS---------IKNGINIVEKYATTSNPNVDVFKLLLDK-------GIPTCSNIQ 137 (631)
T ss_pred HHHHHHHhcccHHHHHHHHHcCCCccc---------ccCCCCcceeEeecCCCChHHHHHHHHC-------CCCcccccc
Confidence 454 56788999999999997664331 13347799999976 6999999999999 55321
Q ss_pred --cc--------ccccc-----cccccccCCCcCCCCCChHHHHHHhhCC-------CHHHHHHhhcCCCCCcccccccc
Q 002122 769 --NK--------ALVDG-----VHKGFLFRPDVIGPAGLTPIHIAAGKDG-------SEDVLDALTDDPGMVGIEAWKNA 826 (964)
Q Consensus 769 --~~--------~lv~~-----a~~~y~fdpn~~d~~G~TPLHiAA~~~G-------~~dVV~lLL~~p~~vg~gAdina 826 (964)
.+ +++.. ....|.+..|..+..|.||||+|+. .+ +.+|+++|+++ ||+++.
T Consensus 138 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~-~~s~~~~~~~~~v~k~Li~~------g~~~~~ 210 (631)
T PHA02792 138 YGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYII-TRSQDGYATSLDVINYLISH------EKEMRY 210 (631)
T ss_pred cCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHh-hCCcccccCCHHHHHHHHhC------CCCcCc
Confidence 12 22221 1223445667888999999999999 77 79999999999 999999
Q ss_pred CCCCCCCHHHHHHHcC--CHHHHHHHHHh
Q 002122 827 RDSSGSTPEDYARLRG--HYSYIHLVQKK 853 (964)
Q Consensus 827 rD~~G~TPLh~A~~rG--h~svv~LL~~k 853 (964)
+|..|.||||+|+.+. ..+++++|..-
T Consensus 211 ~d~~g~t~l~~~~~~~~i~~ei~~~L~~~ 239 (631)
T PHA02792 211 YTYREHTTLYYYVDKCDIKREIFDALFDS 239 (631)
T ss_pred cCCCCChHHHHHHHcccchHHHHHHHHhc
Confidence 9999999999999999 78899988763
|
|
| >PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.1e-11 Score=100.52 Aligned_cols=49 Identities=37% Similarity=0.483 Sum_probs=33.2
Q ss_pred CCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHH
Q 002122 783 RPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYA 838 (964)
Q Consensus 783 dpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A 838 (964)
++|..|..|.||||+||. .|+.++|++|++. +++++++|..|+||||+|
T Consensus 8 ~~n~~d~~G~T~LH~A~~-~g~~~~v~~Ll~~------g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 8 DVNAQDKYGNTPLHWAAR-YGHSEVVRLLLQN------GADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -TT---TTS--HHHHHHH-HT-HHHHHHHHHC------T--TT---TTS--HHHH-
T ss_pred CCcCcCCCCCcHHHHHHH-cCcHHHHHHHHHC------cCCCCCCcCCCCCHHHhC
Confidence 889999999999999999 9999999999988 999999999999999998
|
|
| >PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.4e-10 Score=138.47 Aligned_cols=87 Identities=24% Similarity=0.286 Sum_probs=83.5
Q ss_pred cHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCC
Q 002122 736 GLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDP 815 (964)
Q Consensus 736 TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p 815 (964)
+.||.|+..|+.++|++||.. |+ ++|.+|..|.||||+||. .|+.++|++|+++
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~-------Ga-----------------din~~d~~G~TpLh~Aa~-~g~~eiv~~LL~~- 137 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTG-------GA-----------------DPNCRDYDGRTPLHIACA-NGHVQVVRVLLEF- 137 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHC-------CC-----------------CCCCcCCCCCcHHHHHHH-CCCHHHHHHHHHC-
Confidence 468999999999999999999 77 889999999999999999 9999999999999
Q ss_pred CCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 002122 816 GMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKK 853 (964)
Q Consensus 816 ~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k 853 (964)
||++|.+|..|.||||+|+..|+.+++++|.++
T Consensus 138 -----Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 170 (664)
T PTZ00322 138 -----GADPTLLDKDGKTPLELAEENGFREVVQLLSRH 170 (664)
T ss_pred -----CCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhC
Confidence 999999999999999999999999999999987
|
|
| >KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.05 E-value=6e-10 Score=132.96 Aligned_cols=194 Identities=18% Similarity=0.112 Sum_probs=141.4
Q ss_pred hhhhHHHHHHHHhhhcCc------chhhhh---cCccccHHHHH---HHHHHHhhhhcccccccccCCCCCCCCCcCccc
Q 002122 624 DVCSEIRMLESALEFNRT------DADVER---FGKIDTKNQAM---DFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRR 691 (964)
Q Consensus 624 ~iCsEI~~LE~~le~~a~------~~~~~e---~g~~~~h~~al---~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R 691 (964)
+.+..+..|+.+...+.. +.+.++ .|.+-+|.+.+ +..+++.-.|-+...+-+.+.. ..--.+
T Consensus 109 ~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~-----~~eeY~ 183 (782)
T KOG3676|consen 109 DSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIY-----TSEEYY 183 (782)
T ss_pred cccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhh-----hhHhhc
Confidence 455677777777766642 233332 46666777664 5556666555444321111111 122345
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCccc-CCCC---Cchh-h---------ccCCCcHHHHHHHcCCHHHHHHHhccC
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVS-LGEH---PSLD-L---------ALTELGLLHRAVRKNSRPLVDLLLRFV 757 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd-~g~~---~~le-~---------~l~G~TpLH~AVr~g~~e~VelLL~~~ 757 (964)
..++||.|+.+.+.++|++||+.++|.+.. .|.- ++.. . .--|..||-+||--|+.++|++|+++
T Consensus 184 GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~- 262 (782)
T KOG3676|consen 184 GQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAH- 262 (782)
T ss_pred CcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhc-
Confidence 688999999999999999999988764321 1210 1100 0 12367999999999999999999999
Q ss_pred CCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccc--cccCCCCCCCHH
Q 002122 758 PLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAW--KNARDSSGSTPE 835 (964)
Q Consensus 758 p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAd--inarD~~G~TPL 835 (964)
|| |||++|..|+|.||+-+. .-..++-++++++ ||+ ...++..|.|||
T Consensus 263 ------gA-----------------d~~aqDS~GNTVLH~lVi-~~~~~My~~~L~~------ga~~l~~v~N~qgLTPL 312 (782)
T KOG3676|consen 263 ------GA-----------------DPNAQDSNGNTVLHMLVI-HFVTEMYDLALEL------GANALEHVRNNQGLTPL 312 (782)
T ss_pred ------CC-----------------CCCccccCCChHHHHHHH-HHHHHHHHHHHhc------CCCccccccccCCCChH
Confidence 88 999999999999999999 7778899999999 888 889999999999
Q ss_pred HHHHHcCCHHHHHHHHHh
Q 002122 836 DYARLRGHYSYIHLVQKK 853 (964)
Q Consensus 836 h~A~~rGh~svv~LL~~k 853 (964)
.+|+.-|+.++-+.+.++
T Consensus 313 tLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 313 TLAAKLGKKEMFQHILER 330 (782)
T ss_pred HHHHHhhhHHHHHHHHHh
Confidence 999999999999866665
|
|
| >KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.05 E-value=2e-10 Score=135.71 Aligned_cols=146 Identities=21% Similarity=0.227 Sum_probs=115.8
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccCc----ccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccc
Q 002122 694 WLIEFSMDHEWCAVVKKLLHILLDGT----VSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSEN 769 (964)
Q Consensus 694 ~lL~fAve~g~~aVVk~LL~~l~d~~----vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~ 769 (964)
+=|.-|++.|..+.|..||+...-+. ...-..+....+..|.|+||-||.+|+.+++++|+++ -+
T Consensus 5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~-------ea---- 73 (854)
T KOG0507|consen 5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDY-------EA---- 73 (854)
T ss_pred hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcc-------hh----
Confidence 34667899999999999998532111 0011112223466899999999999999999999999 33
Q ss_pred cccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHH
Q 002122 770 KALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHL 849 (964)
Q Consensus 770 ~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~L 849 (964)
-.+..|..|.+|||+||. .|+.++|++|+.+ ++.+|+....|.||||.|+++||.+++++
T Consensus 74 -------------~ldl~d~kg~~plhlaaw-~g~~e~vkmll~q------~d~~na~~~e~~tplhlaaqhgh~dvv~~ 133 (854)
T KOG0507|consen 74 -------------LLDLCDTKGILPLHLAAW-NGNLEIVKMLLLQ------TDILNAVNIENETPLHLAAQHGHLEVVFY 133 (854)
T ss_pred -------------hhhhhhccCcceEEehhh-cCcchHHHHHHhc------ccCCCcccccCcCccchhhhhcchHHHHH
Confidence 456777889999999999 9999999999999 88899999999999999999999999999
Q ss_pred HHHhhhcCC---CCCCceeecCCC
Q 002122 850 VQKKINKRP---NGGHVVVDICGV 870 (964)
Q Consensus 850 L~~k~ak~~---~~~~v~v~ip~~ 870 (964)
|.+++++.. +..+.+++.+..
T Consensus 134 Ll~~~adp~i~nns~~t~ldlA~q 157 (854)
T KOG0507|consen 134 LLKKNADPFIRNNSKETVLDLASR 157 (854)
T ss_pred HHhcCCCccccCcccccHHHHHHH
Confidence 999998643 233555555443
|
|
| >PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A | Back alignment and domain information |
|---|
Probab=99.00 E-value=7.1e-10 Score=91.72 Aligned_cols=54 Identities=31% Similarity=0.404 Sum_probs=45.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhh
Q 002122 734 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 812 (964)
Q Consensus 734 G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL 812 (964)
|+||||+||+.|+.+++++|++. |. ++|.+|..|+||||+|+. .|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~-------~~-----------------din~~d~~g~t~lh~A~~-~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEH-------GA-----------------DINAQDEDGRTPLHYAAK-NGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHT-------TS-----------------GTT-B-TTS--HHHHHHH-TT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHC-------CC-----------------CCCCCCCCCCCHHHHHHH-ccCHHHHHHHC
Confidence 67999999999999999999998 66 789999999999999999 99999999986
|
... |
| >PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.7e-09 Score=129.42 Aligned_cols=113 Identities=19% Similarity=0.168 Sum_probs=95.0
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
...|+.|+..|+.++|+.||+.+++.+ ..+..|.||||+|+..|+.++|++||++ |+
T Consensus 83 ~~~L~~aa~~G~~~~vk~LL~~Gadin---------~~d~~G~TpLh~Aa~~g~~eiv~~LL~~-------Ga------- 139 (664)
T PTZ00322 83 TVELCQLAASGDAVGARILLTGGADPN---------CRDYDGRTPLHIACANGHVQVVRVLLEF-------GA------- 139 (664)
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCCC---------CcCCCCCcHHHHHHHCCCHHHHHHHHHC-------CC-------
Confidence 346889999999999999998654321 1355689999999999999999999999 88
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCC-CccccccccCCCCCCCHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGM-VGIEAWKNARDSSGSTPEDYAR 839 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~-vg~gAdinarD~~G~TPLh~A~ 839 (964)
++|.+|..|.||||+|+. .|+.+++++|+++... ...+|+.+..+..|.+|+..+.
T Consensus 140 ----------dvn~~d~~G~TpLh~A~~-~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 140 ----------DPTLLDKDGKTPLELAEE-NGFREVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred ----------CCCCCCCCCCCHHHHHHH-CCcHHHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 899999999999999999 9999999999987222 4458888888988888877665
|
|
| >COG0666 Arp FOG: Ankyrin repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.96 E-value=3e-09 Score=105.78 Aligned_cols=97 Identities=30% Similarity=0.367 Sum_probs=87.9
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCC-----H
Q 002122 731 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS-----E 805 (964)
Q Consensus 731 ~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~-----~ 805 (964)
...+.+++|.|+..+..+++.+|+.. |+ +++..+..|.||||+|+. .|+ .
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~-----------------~~~~~~~~g~t~l~~a~~-~~~~~~~~~ 124 (235)
T COG0666 70 DLDGRLPLHSAASKGDDKIVKLLLAS-------GA-----------------DVNAKDADGDTPLHLAAL-NGNPPEGNI 124 (235)
T ss_pred CccccCHHHHHHHcCcHHHHHHHHHc-------CC-----------------CcccccCCCCcHHHHHHh-cCCcccchH
Confidence 34467999999999999999999988 66 789999999999999999 999 9
Q ss_pred HHHHHhhcCCCCCcccc---ccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 806 DVLDALTDDPGMVGIEA---WKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 806 dVV~lLL~~p~~vg~gA---dinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
+++++|++. |+ ..+.+|..|.||||+|+..|+.+++++|.+.+++..
T Consensus 125 ~~~~~ll~~------g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~ 174 (235)
T COG0666 125 EVAKLLLEA------GADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPN 174 (235)
T ss_pred HHHHHHHHc------CCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCc
Confidence 999999999 88 677779999999999999999999999999976544
|
|
| >KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.8e-09 Score=123.31 Aligned_cols=93 Identities=24% Similarity=0.184 Sum_probs=83.3
Q ss_pred CcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcC
Q 002122 735 LGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDD 814 (964)
Q Consensus 735 ~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~ 814 (964)
.-+|.-|+-.|..++|+..+.. -. ||...+..|.||||-|.+ .||.+||++|++.
T Consensus 551 LaLLLDaaLeGEldlVq~~i~e-------v~-----------------DpSqpNdEGITaLHNAiC-aghyeIVkFLi~~ 605 (752)
T KOG0515|consen 551 LALLLDAALEGELDLVQRIIYE-------VT-----------------DPSQPNDEGITALHNAIC-AGHYEIVKFLIEF 605 (752)
T ss_pred HHHHHhhhhcchHHHHHHHHHh-------hc-----------------CCCCCCccchhHHhhhhh-cchhHHHHHHHhc
Confidence 3567778889999999988766 22 677778899999999999 9999999999999
Q ss_pred CCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 815 PGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 815 p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
||++|+.|.+||||||+|+.-++.-+++.|.+.++.+-
T Consensus 606 ------ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~Gaavf 643 (752)
T KOG0515|consen 606 ------GANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVF 643 (752)
T ss_pred ------CCcccCccCCCCchhhhhhhcCchHHHHHHHhccceEE
Confidence 99999999999999999999999999999999988654
|
|
| >KOG4214 consensus Myotrophin and similar proteins [Transcription] | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.9e-09 Score=99.96 Aligned_cols=89 Identities=26% Similarity=0.259 Sum_probs=78.8
Q ss_pred HHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCC
Q 002122 738 LHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGM 817 (964)
Q Consensus 738 LH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~ 817 (964)
..+++++|..+-|+..... |. ++|.. ..|+||||+||- .|..+|+++|+.-
T Consensus 6 ~~W~vkNG~~DeVk~~v~~-------g~-----------------nVn~~-~ggR~plhyAAD-~GQl~ilefli~i--- 56 (117)
T KOG4214|consen 6 VAWNVKNGEIDEVKQSVNE-------GL-----------------NVNEI-YGGRTPLHYAAD-YGQLSILEFLISI--- 56 (117)
T ss_pred HhhhhccCcHHHHHHHHHc-------cc-----------------cHHHH-hCCcccchHhhh-cchHHHHHHHHHh---
Confidence 4678899999988877666 43 45533 489999999999 9999999999998
Q ss_pred CccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 818 VGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 818 vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
||+++.+|+.|.|||--|...||.+.|++|.++++++.
T Consensus 57 ---GA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt 94 (117)
T KOG4214|consen 57 ---GANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRT 94 (117)
T ss_pred ---ccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccc
Confidence 99999999999999999999999999999999999875
|
|
| >KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.86 E-value=6.8e-09 Score=124.17 Aligned_cols=141 Identities=21% Similarity=0.142 Sum_probs=107.3
Q ss_pred cchHHHHHHHc---CchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcc
Q 002122 692 FKWLIEFSMDH---EWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSE 768 (964)
Q Consensus 692 ~k~lL~fAve~---g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~ 768 (964)
.+++||.|.-+ ++.++++.||+..-+- + ++ .-....-.|.|+||.|+.+.+.++|++||+. ||+..
T Consensus 143 GET~Lh~~lL~~~~~~n~la~~LL~~~p~l-i--nd-~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~-------gADV~ 211 (782)
T KOG3676|consen 143 GETLLHKALLNLSDGHNELARVLLEIFPKL-I--ND-IYTSEEYYGQSALHIAIVNRDAELVRLLLAA-------GADVH 211 (782)
T ss_pred hhhHHHHHHhcCchhHHHHHHHHHHHhHHH-h--hh-hhhhHhhcCcchHHHHHHhccHHHHHHHHHc-------CCchh
Confidence 58899999763 4669999999864311 1 11 1112245689999999999999999999999 77422
Q ss_pred ccccccccccccccCCCcC------------CCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHH
Q 002122 769 NKALVDGVHKGFLFRPDVI------------GPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPED 836 (964)
Q Consensus 769 ~~~lv~~a~~~y~fdpn~~------------d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh 836 (964)
. ++. |-=|.|+-. =..|..||-+||+ -++.+|+++|+++ |||+|++|.+|+|-||
T Consensus 212 a-----Ra~-G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC-~nq~eivrlLl~~------gAd~~aqDS~GNTVLH 278 (782)
T KOG3676|consen 212 A-----RAC-GAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAAC-TNQPEIVRLLLAH------GADPNAQDSNGNTVLH 278 (782)
T ss_pred h-----Hhh-ccccCcccccccccccCCcceeeeccCchHHHHH-cCCHHHHHHHHhc------CCCCCccccCCChHHH
Confidence 1 122 222333322 1358899999999 9999999999999 9999999999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhc
Q 002122 837 YARLRGHYSYIHLVQKKINK 856 (964)
Q Consensus 837 ~A~~rGh~svv~LL~~k~ak 856 (964)
.-...-..++-.++..++++
T Consensus 279 ~lVi~~~~~My~~~L~~ga~ 298 (782)
T KOG3676|consen 279 MLVIHFVTEMYDLALELGAN 298 (782)
T ss_pred HHHHHHHHHHHHHHHhcCCC
Confidence 99998888888888888876
|
|
| >KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.85 E-value=9.6e-09 Score=110.96 Aligned_cols=123 Identities=24% Similarity=0.236 Sum_probs=105.5
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
--+.+|.-++..|.++-...||..... + + -.+..||++|.-|+-+|+.++|++||+. |+
T Consensus 11 ~~~~~Lle~i~Kndt~~a~~LLs~vr~--v--n-----~~D~sGMs~LahAaykGnl~~v~lll~~-------ga----- 69 (396)
T KOG1710|consen 11 APKSPLLEAIDKNDTEAALALLSTVRQ--V--N-----QRDPSGMSVLAHAAYKGNLTLVELLLEL-------GA----- 69 (396)
T ss_pred chhhHHHHHHccCcHHHHHHHHHHhhh--h--h-----ccCCCcccHHHHHHhcCcHHHHHHHHHh-------CC-----
Confidence 347789999999999999999984221 1 1 1356799999999999999999999999 88
Q ss_pred ccccccccccccCCCc-CCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHH
Q 002122 771 ALVDGVHKGFLFRPDV-IGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHL 849 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~-~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~L 849 (964)
|+|. .+..+.||||+||. +|+.+|..+|++. ||.....+.-|+|+-..|+.-||.+.|..
T Consensus 70 ------------DvN~~qhg~~YTpLmFAAL-SGn~dvcrlllda------Ga~~~~vNsvgrTAaqmAAFVG~H~CV~i 130 (396)
T KOG1710|consen 70 ------------DVNDKQHGTLYTPLMFAAL-SGNQDVCRLLLDA------GARMYLVNSVGRTAAQMAAFVGHHECVAI 130 (396)
T ss_pred ------------CcCcccccccccHHHHHHH-cCCchHHHHHHhc------cCccccccchhhhHHHHHHHhcchHHHHH
Confidence 6664 35578999999999 9999999999999 99999999999999999999999999887
Q ss_pred HHHh
Q 002122 850 VQKK 853 (964)
Q Consensus 850 L~~k 853 (964)
+-..
T Consensus 131 INN~ 134 (396)
T KOG1710|consen 131 INNH 134 (396)
T ss_pred Hhcc
Confidence 7554
|
|
| >KOG4214 consensus Myotrophin and similar proteins [Transcription] | Back alignment and domain information |
|---|
Probab=98.85 E-value=7e-09 Score=96.32 Aligned_cols=103 Identities=16% Similarity=0.191 Sum_probs=86.7
Q ss_pred HHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccc
Q 002122 696 IEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDG 775 (964)
Q Consensus 696 L~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~ 775 (964)
..+++.+|-.+-|+.....+. +......|.+|||+|+-.|..+++++|+.. |+
T Consensus 6 ~~W~vkNG~~DeVk~~v~~g~----------nVn~~~ggR~plhyAAD~GQl~ilefli~i-------GA---------- 58 (117)
T KOG4214|consen 6 VAWNVKNGEIDEVKQSVNEGL----------NVNEIYGGRTPLHYAADYGQLSILEFLISI-------GA---------- 58 (117)
T ss_pred HhhhhccCcHHHHHHHHHccc----------cHHHHhCCcccchHhhhcchHHHHHHHHHh-------cc----------
Confidence 456788888888876665221 122345789999999999999999999999 88
Q ss_pred cccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHH
Q 002122 776 VHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYAR 839 (964)
Q Consensus 776 a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~ 839 (964)
+++.+|+.|.|||--|.. .||.++|++|+.. ||+...+.-+|.|.+..+-
T Consensus 59 -------~i~~kDKygITPLLsAvw-EGH~~cVklLL~~------GAdrt~~~PdG~~~~eate 108 (117)
T KOG4214|consen 59 -------NIQDKDKYGITPLLSAVW-EGHRDCVKLLLQN------GADRTIHAPDGTALIEATE 108 (117)
T ss_pred -------ccCCccccCCcHHHHHHH-HhhHHHHHHHHHc------CcccceeCCCchhHHhhcc
Confidence 899999999999999999 9999999999999 9999999999988766553
|
|
| >KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.84 E-value=6e-09 Score=119.15 Aligned_cols=119 Identities=18% Similarity=0.158 Sum_probs=96.1
Q ss_pred HHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccccc
Q 002122 695 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 774 (964)
Q Consensus 695 lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~ 774 (964)
+|.-|+-.|-.++|+..+.-+-| ....+..|+|+||-|+..||.+||+|||.+ |+
T Consensus 553 LLLDaaLeGEldlVq~~i~ev~D---------pSqpNdEGITaLHNAiCaghyeIVkFLi~~-------ga--------- 607 (752)
T KOG0515|consen 553 LLLDAALEGELDLVQRIIYEVTD---------PSQPNDEGITALHNAICAGHYEIVKFLIEF-------GA--------- 607 (752)
T ss_pred HHHhhhhcchHHHHHHHHHhhcC---------CCCCCccchhHHhhhhhcchhHHHHHHHhc-------CC---------
Confidence 45667778889999988763322 112345699999999999999999999999 88
Q ss_pred ccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCC-CCCCCHHHHHH--HcCCHHHHHHHH
Q 002122 775 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARD-SSGSTPEDYAR--LRGHYSYIHLVQ 851 (964)
Q Consensus 775 ~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD-~~G~TPLh~A~--~rGh~svv~LL~ 851 (964)
++|+.|.+|+||||.||+ -++.-|++.|.++ ||-+-+.. .++.||.+-.- +.|+....++|.
T Consensus 608 --------nVNa~DSdGWTPLHCAAS-CNnv~~ckqLVe~------GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~ 672 (752)
T KOG0515|consen 608 --------NVNAADSDGWTPLHCAAS-CNNVPMCKQLVES------GAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLY 672 (752)
T ss_pred --------cccCccCCCCchhhhhhh-cCchHHHHHHHhc------cceEEeeecccccchhhhcchhhhhHHHHHHHHH
Confidence 999999999999999999 8899999999999 88777765 68899987553 347777777765
Q ss_pred Hh
Q 002122 852 KK 853 (964)
Q Consensus 852 ~k 853 (964)
..
T Consensus 673 ~v 674 (752)
T KOG0515|consen 673 GV 674 (752)
T ss_pred HH
Confidence 43
|
|
| >KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.7e-09 Score=128.88 Aligned_cols=195 Identities=16% Similarity=0.104 Sum_probs=148.1
Q ss_pred eeeecCCCCCCCcceeecchhhhhHHHHHHHHhhhcCcchh-hhhcCccccH-------HHHHHHHHHHhhhhccccccc
Q 002122 604 IEIEDHGFSSTFFPFIVAEEDVCSEIRMLESALEFNRTDAD-VERFGKIDTK-------NQAMDFIHEIGWLFHRSQSKS 675 (964)
Q Consensus 604 IEVE~~Glss~ffP~LVad~~iCsEI~~LE~~le~~a~~~~-~~e~g~~~~h-------~~al~fL~EIGWLLqr~~~~~ 675 (964)
||.-+ .-+|.|+|+|.-+ ..+..+|.+++..+..++ .+.++.+.+- ..+.+.|+-.|..=.+
T Consensus 783 iehrd---kkgf~plImaata--gh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankeh----- 852 (2131)
T KOG4369|consen 783 IEHRD---KKGFVPLIMAATA--GHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEH----- 852 (2131)
T ss_pred ccccc---cccchhhhhhccc--CchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccc-----
Confidence 45444 3459999998765 778888888887765443 2333333322 2445556555533111
Q ss_pred ccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhc
Q 002122 676 RLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLR 755 (964)
Q Consensus 676 ~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~ 755 (964)
++-.| -+||.+|..-|++.+|+.||..+.+.+..+| ...|..||.+|...||.+.+..||+
T Consensus 853 -rnvsD-----------ytPlsla~Sggy~~iI~~llS~GseInSrtg-------SklgisPLmlatmngh~~at~~ll~ 913 (2131)
T KOG4369|consen 853 -RNVSD-----------YTPLSLARSGGYTKIIHALLSSGSEINSRTG-------SKLGISPLMLATMNGHQAATLSLLQ 913 (2131)
T ss_pred -cchhh-----------cCchhhhcCcchHHHHHHHhhcccccccccc-------cccCcchhhhhhhccccHHHHHHhc
Confidence 11111 4689999999999999999998766554433 3448899999999999999999999
Q ss_pred cCCCccccccCccccccccccccccccCCCcCC-CCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCH
Q 002122 756 FVPLEVSDRLGSENKALVDGVHKGFLFRPDVIG-PAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTP 834 (964)
Q Consensus 756 ~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d-~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TP 834 (964)
. |. ++|..- .+-+|+|-+|.- .|..++|.+||.+ .|++..|-++|.||
T Consensus 914 ~-------gs-----------------diNaqIeTNrnTaltla~f-qgr~evv~lLLa~------~anvehRaktgltp 962 (2131)
T KOG4369|consen 914 P-------GS-----------------DINAQIETNRNTALTLALF-QGRPEVVFLLLAA------QANVEHRAKTGLTP 962 (2131)
T ss_pred c-------cc-----------------hhccccccccccceeeccc-cCcchHHHHHHHH------hhhhhhhcccCCcc
Confidence 8 66 555433 366799999988 9999999999999 99999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 835 EDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 835 Lh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
|..++..|+.++=++|+.++++..
T Consensus 963 lme~AsgGyvdvg~~li~~gad~n 986 (2131)
T KOG4369|consen 963 LMEMASGGYVDVGNLLIAAGADTN 986 (2131)
T ss_pred cchhhcCCccccchhhhhcccccc
Confidence 999999999999999999999875
|
|
| >KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.76 E-value=5.3e-09 Score=118.50 Aligned_cols=93 Identities=17% Similarity=0.179 Sum_probs=83.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhh
Q 002122 733 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 812 (964)
Q Consensus 733 ~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL 812 (964)
.+...+.+|++.|+...++-+.-. |. |.+.+|.+.+|+||+||. +|+++++++|+
T Consensus 505 ~~~i~~~~aa~~GD~~alrRf~l~-------g~-----------------D~~~~DyD~RTaLHvAAa-EG~v~v~kfl~ 559 (622)
T KOG0506|consen 505 DTVINVMYAAKNGDLSALRRFALQ-------GM-----------------DLETKDYDDRTALHVAAA-EGHVEVVKFLL 559 (622)
T ss_pred cchhhhhhhhhcCCHHHHHHHHHh-------cc-----------------cccccccccchhheeecc-cCceeHHHHHH
Confidence 345689999999999988766555 55 889999999999999999 99999999999
Q ss_pred cCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 002122 813 DDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKIN 855 (964)
Q Consensus 813 ~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~a 855 (964)
+.. +.+++.+|.||+|||+.|...+|.+++++|++...
T Consensus 560 ~~~-----kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 560 NAC-----KVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEAQY 597 (622)
T ss_pred HHH-----cCCCChhhccCCCcchHhHhcCcHHHHHHHHHHhc
Confidence 973 78999999999999999999999999999998754
|
|
| >KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.2e-08 Score=123.58 Aligned_cols=227 Identities=14% Similarity=0.038 Sum_probs=151.6
Q ss_pred eeeecCCCCCCCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCC
Q 002122 604 IEIEDHGFSSTFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDP 682 (964)
Q Consensus 604 IEVE~~Glss~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~ 682 (964)
+|||.+-=+..=+++-++|-. ..-+..|.++..++....-+-...+++-.+. =++.+.|-.||..+.-...+.-.
T Consensus 814 a~veaQsdrtkdt~lSlacsg--gr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgS-- 889 (2131)
T KOG4369|consen 814 ADVEAQSDRTKDTMLSLACSG--GRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGS-- 889 (2131)
T ss_pred hhhhhhcccccCceEEEecCC--CcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhccccccccccc--
Confidence 566654334556777777754 4445678899988877655445566777766 48999999999888422222111
Q ss_pred CCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccc
Q 002122 683 NTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVS 762 (964)
Q Consensus 683 ~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~ 762 (964)
. ..-.||++|..+||.+.++.||+.+-+.+..+ .....|+|-+|+-.|..++|.+||.+..+.+
T Consensus 890 -----k--lgisPLmlatmngh~~at~~ll~~gsdiNaqI--------eTNrnTaltla~fqgr~evv~lLLa~~anve- 953 (2131)
T KOG4369|consen 890 -----K--LGISPLMLATMNGHQAATLSLLQPGSDINAQI--------ETNRNTALTLALFQGRPEVVFLLLAAQANVE- 953 (2131)
T ss_pred -----c--cCcchhhhhhhccccHHHHHHhcccchhcccc--------ccccccceeeccccCcchHHHHHHHHhhhhh-
Confidence 1 13458999999999999999998655443321 1223467777777777777777776621100
Q ss_pred cccCcccccccccccccccc----------CCCc--CCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCC
Q 002122 763 DRLGSENKALVDGVHKGFLF----------RPDV--IGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSS 830 (964)
Q Consensus 763 dGa~~~~~~lv~~a~~~y~f----------dpn~--~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~ 830 (964)
--+-.+.+||..-++.+|+- |.|. .-....|+|-|+|. .||...|.+|+.. .|-+..+++.
T Consensus 954 hRaktgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~-kGh~kfv~~lln~------~atv~v~Nkk 1026 (2131)
T KOG4369|consen 954 HRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPAN-KGHTKFVPKLLNG------DATVRVPNKK 1026 (2131)
T ss_pred hhcccCCcccchhhcCCccccchhhhhcccccccCCCCCcCCccceeecC-CCchhhhHHhhCC------ccceecccCC
Confidence 00001124555555555520 1221 11234588888888 8888888888888 7888899999
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 831 GSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 831 G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
|.|||+.|+..||.+.+++|..+.++.
T Consensus 1027 G~T~Lwla~~Gg~lss~~il~~~~ad~ 1053 (2131)
T KOG4369|consen 1027 GCTVLWLASAGGALSSCPILVSSVADA 1053 (2131)
T ss_pred CCcccchhccCCccccchHHhhcccCh
Confidence 999999999999999999999988764
|
|
| >PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.4e-08 Score=85.31 Aligned_cols=45 Identities=31% Similarity=0.337 Sum_probs=30.5
Q ss_pred hccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHH
Q 002122 730 LALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIA 798 (964)
Q Consensus 730 ~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiA 798 (964)
.+..|.||||+||+.|+.++|++||++ |+ +++.+|..|+||||+|
T Consensus 12 ~d~~G~T~LH~A~~~g~~~~v~~Ll~~-------g~-----------------d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 12 QDKYGNTPLHWAARYGHSEVVRLLLQN-------GA-----------------DPNAKDKDGQTPLHYA 56 (56)
T ss_dssp --TTS--HHHHHHHHT-HHHHHHHHHC-------T-------------------TT---TTS--HHHH-
T ss_pred cCCCCCcHHHHHHHcCcHHHHHHHHHC-------cC-----------------CCCCCcCCCCCHHHhC
Confidence 466799999999999999999999988 77 8999999999999998
|
|
| >KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.67 E-value=3e-08 Score=114.36 Aligned_cols=91 Identities=23% Similarity=0.249 Sum_probs=85.2
Q ss_pred HHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCC
Q 002122 737 LLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPG 816 (964)
Q Consensus 737 pLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~ 816 (964)
.+.-|+..+..+=|+.||.. |+ .||..+.+|.|+||-++. ..+.+||++|+++
T Consensus 43 ~~l~A~~~~d~~ev~~ll~~-------ga-----------------~~~~~n~DglTalhq~~i-d~~~e~v~~l~e~-- 95 (527)
T KOG0505|consen 43 VFLEACSRGDLEEVRKLLNR-------GA-----------------SPNLCNVDGLTALHQACI-DDNLEMVKFLVEN-- 95 (527)
T ss_pred HHHhccccccHHHHHHHhcc-------CC-----------------CccccCCccchhHHHHHh-cccHHHHHHHHHh--
Confidence 46678889999999999999 76 679999999999999999 9999999999999
Q ss_pred CCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 817 MVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 817 ~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
||++|+.|.+|+||||.|+--||..++++|+..++...
T Consensus 96 ----ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~ 133 (527)
T KOG0505|consen 96 ----GANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLL 133 (527)
T ss_pred ----cCCccccccccCCcchhhcccccHHHHHHHHHhhhhhh
Confidence 99999999999999999999999999999999998765
|
|
| >KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.1e-07 Score=108.28 Aligned_cols=85 Identities=34% Similarity=0.405 Sum_probs=77.1
Q ss_pred HHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCC-CCChHHHHHHhhCCCHHHHHHhhcCC
Q 002122 737 LLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGP-AGLTPIHIAAGKDGSEDVLDALTDDP 815 (964)
Q Consensus 737 pLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~-~G~TPLHiAA~~~G~~dVV~lLL~~p 815 (964)
-||..|+.++.+..--||.. || ++|..++ .|.||||+||. .|...-+++|.=+
T Consensus 136 QLhasvRt~nlet~LRll~l-------GA-----------------~~N~~hpekg~TpLHvAAk-~Gq~~Q~ElL~vY- 189 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSL-------GA-----------------QANFFHPEKGNTPLHVAAK-AGQILQAELLAVY- 189 (669)
T ss_pred HHHHHhhcccHHHHHHHHHc-------cc-----------------ccCCCCcccCCchhHHHHh-ccchhhhhHHhhc-
Confidence 59999999999998888888 88 7777766 58999999999 9999999999999
Q ss_pred CCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 816 GMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 816 ~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
|||+++.|.+|+||++||+..||.++.+-|.+
T Consensus 190 -----GAD~~a~d~~GmtP~~~AR~~gH~~laeRl~e 221 (669)
T KOG0818|consen 190 -----GADPGAQDSSGMTPVDYARQGGHHELAERLVE 221 (669)
T ss_pred -----cCCCCCCCCCCCcHHHHHHhcCchHHHHHHHH
Confidence 99999999999999999999999999886554
|
|
| >KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.43 E-value=4.8e-07 Score=98.14 Aligned_cols=93 Identities=23% Similarity=0.203 Sum_probs=83.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhc
Q 002122 734 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 813 (964)
Q Consensus 734 G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~ 813 (964)
...+|..|+.+|+.+....||..+ - .+|.+|+.|+|+|..||. .|+.++|++|++
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~v-------r-----------------~vn~~D~sGMs~LahAay-kGnl~~v~lll~ 66 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLSTV-------R-----------------QVNQRDPSGMSVLAHAAY-KGNLTLVELLLE 66 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHHh-------h-----------------hhhccCCCcccHHHHHHh-cCcHHHHHHHHH
Confidence 347899999999999999898772 1 578999999999999999 999999999999
Q ss_pred CCCCCccccccccC-CCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 814 DPGMVGIEAWKNAR-DSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 814 ~p~~vg~gAdinar-D~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
. |||+|.. +..++||||+|+..||.++.++|...+++.
T Consensus 67 ~------gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~ 105 (396)
T KOG1710|consen 67 L------GADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARM 105 (396)
T ss_pred h------CCCcCcccccccccHHHHHHHcCCchHHHHHHhccCcc
Confidence 9 9999975 679999999999999999999999987753
|
|
| >KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.22 E-value=2e-06 Score=99.83 Aligned_cols=91 Identities=26% Similarity=0.174 Sum_probs=78.0
Q ss_pred cHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCC--cCCCCCChHHHHHHhhCCCHHHHHHhhc
Q 002122 736 GLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPD--VIGPAGLTPIHIAAGKDGSEDVLDALTD 813 (964)
Q Consensus 736 TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn--~~d~~G~TPLHiAA~~~G~~dVV~lLL~ 813 (964)
.-|..|+...+...+-+||.+ |... .+| ..+.+|+||||+||. .|+..+..+|+.
T Consensus 626 qqLl~A~~~~Dl~t~~lLLAh-------g~~~---------------e~~~t~~~~~grt~LHLa~~-~gnVvl~QLLiW 682 (749)
T KOG0705|consen 626 QQLLRAVAAEDLQTAILLLAH-------GSRE---------------EVNETCGEGDGRTALHLAAR-KGNVVLAQLLIW 682 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-------cCch---------------hhhccccCCCCcchhhhhhh-hcchhHHHHHHH
Confidence 347788888889989999988 4310 222 345688999999999 999999999999
Q ss_pred CCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 002122 814 DPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKIN 855 (964)
Q Consensus 814 ~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~a 855 (964)
+ |+|+-++|..|.|+|.||+..|.-+.+.+|...+-
T Consensus 683 y------g~dv~~rda~g~t~l~yar~a~sqec~d~llq~gc 718 (749)
T KOG0705|consen 683 Y------GVDVMARDAHGRTALFYARQAGSQECIDVLLQYGC 718 (749)
T ss_pred h------CccceecccCCchhhhhHhhcccHHHHHHHHHcCC
Confidence 9 99999999999999999999999999999999874
|
|
| >PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature | Back alignment and domain information |
|---|
Probab=98.14 E-value=2.3e-06 Score=64.34 Aligned_cols=33 Identities=42% Similarity=0.548 Sum_probs=30.7
Q ss_pred CCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCC
Q 002122 790 AGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDS 829 (964)
Q Consensus 790 ~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~ 829 (964)
+|+||||+||. .|+.+++++|+++ ||+++++|+
T Consensus 1 dG~TpLh~A~~-~~~~~~v~~Ll~~------ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQ-RGHPDIVKLLLKH------GADINARDN 33 (33)
T ss_dssp TSBBHHHHHHH-TTCHHHHHHHHHT------TSCTTCBCT
T ss_pred CcccHHHHHHH-HHHHHHHHHHHHC------cCCCCCCCC
Confidence 58999999999 9999999999999 999999884
|
Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A .... |
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
Probab=98.08 E-value=3.5e-05 Score=95.17 Aligned_cols=154 Identities=19% Similarity=0.219 Sum_probs=107.7
Q ss_pred HHHHHHHhh-hhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCc
Q 002122 658 MDFIHEIGW-LFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELG 736 (964)
Q Consensus 658 l~fL~EIGW-LLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~T 736 (964)
+.+++++.. ++..+.. . ...+...|...+||++++.++.-++.++++- ......+.+.+|..
T Consensus 548 ~~l~~~~~~r~~~~~~~-----~----~~~~~~~r~~lllhL~a~~lyawLie~~~e~--------~~~~~~eld~d~qg 610 (975)
T KOG0520|consen 548 VHLLNEWAYRLLKSISE-----N----LSSSVNFRDMLLLHLLAELLYAWLIEKVIEW--------AGSGDLELDRDGQG 610 (975)
T ss_pred HHHHHHHHHHHHhhHhh-----h----ccccCCCcchHHHHHHHHHhHHHHHHHHhcc--------cccCchhhcccCCC
Confidence 566666666 5554421 1 1123334667899999999999998888872 01112334556777
Q ss_pred HHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCC
Q 002122 737 LLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPG 816 (964)
Q Consensus 737 pLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~ 816 (964)
-+|+ |..++.+.+-+|+.+. |. .+|++|..|+||||+||. .|++.++..|.+--.
T Consensus 611 V~hf-ca~lg~ewA~ll~~~~------~~-----------------ai~i~D~~G~tpL~wAa~-~G~e~l~a~l~~lga 665 (975)
T KOG0520|consen 611 VIHF-CAALGYEWAFLPISAD------GV-----------------AIDIRDRNGWTPLHWAAF-RGREKLVASLIELGA 665 (975)
T ss_pred hhhH-hhhcCCceeEEEEeec------cc-----------------ccccccCCCCcccchHhh-cCHHHHHHHHHHhcc
Confidence 8888 4456667666666662 44 678999999999999999 999999999986511
Q ss_pred CCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 002122 817 MVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKK 853 (964)
Q Consensus 817 ~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k 853 (964)
.-|.--+++..+-.|.|+-+.|..+||..+.-+|.++
T Consensus 666 ~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 666 DPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred ccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 1222223444455799999999999999999999887
|
|
| >KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.07 E-value=7e-06 Score=94.97 Aligned_cols=96 Identities=27% Similarity=0.338 Sum_probs=85.4
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHH
Q 002122 731 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDA 810 (964)
Q Consensus 731 ~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~l 810 (964)
..+-.++||+|++.|+.++|+++|++.|.. -.|+.|..|.|+||-||+ .++..|..+
T Consensus 896 ~~~~~sllh~a~~tg~~eivkyildh~p~e----------------------lld~~de~get~lhkaa~-~~~r~vc~~ 952 (1004)
T KOG0782|consen 896 GPDHCSLLHYAAKTGNGEIVKYILDHGPSE----------------------LLDMADETGETALHKAAC-QRNRAVCQL 952 (1004)
T ss_pred CcchhhHHHHHHhcCChHHHHHHHhcCCHH----------------------HHHHHhhhhhHHHHHHHH-hcchHHHHH
Confidence 344569999999999999999999996552 346677899999999999 999999999
Q ss_pred hhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 002122 811 LTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKIN 855 (964)
Q Consensus 811 LL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~a 855 (964)
|.+. ||..-..|..|.||-.-|.+.|..+++.+|..+-+
T Consensus 953 lvda------gasl~ktd~kg~tp~eraqqa~d~dlaayle~rq~ 991 (1004)
T KOG0782|consen 953 LVDA------GASLRKTDSKGKTPQERAQQAGDPDLAAYLESRQN 991 (1004)
T ss_pred HHhc------chhheecccCCCChHHHHHhcCCchHHHHHhhhhc
Confidence 9999 99999999999999999999999999999987654
|
|
| >KOG0522 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.07 E-value=6.8e-06 Score=95.29 Aligned_cols=91 Identities=24% Similarity=0.244 Sum_probs=75.9
Q ss_pred cHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCC
Q 002122 736 GLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDP 815 (964)
Q Consensus 736 TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p 815 (964)
-|||+++-..+.+-.+.++... . +. .+|.+|..|.||||+|+. -|+.+.+..|+.+
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~-~----~~-----------------~id~~D~~g~TpLhlAV~-Lg~~~~a~~Ll~a- 77 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAK-V----SL-----------------VIDRRDPPGRTPLHLAVR-LGHVEAARILLSA- 77 (560)
T ss_pred cccchhhhccchhhHHHHHhhh-h----hc-----------------eeccccCCCCccHHHHHH-hcCHHHHHHHHhc-
Confidence 4599999888766555444441 1 22 578889999999999999 9999999999999
Q ss_pred CCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 002122 816 GMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKIN 855 (964)
Q Consensus 816 ~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~a 855 (964)
+|++..+|+.|+||||.|+..|+..++..|.++..
T Consensus 78 -----~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~~~ 112 (560)
T KOG0522|consen 78 -----GADVSIKNNEGWSPLHEAVSTGNEQIITEVLRHLK 112 (560)
T ss_pred -----CCCccccccccccHHHHHHHcCCHHHHHHHHHHhH
Confidence 99999999999999999999999999887777653
|
|
| >PF13606 Ank_3: Ankyrin repeat | Back alignment and domain information |
|---|
Probab=98.00 E-value=5.1e-06 Score=61.91 Aligned_cols=30 Identities=37% Similarity=0.554 Sum_probs=26.2
Q ss_pred CCChHHHHHHhhCCCHHHHHHhhcCCCCCcccccccc
Q 002122 790 AGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNA 826 (964)
Q Consensus 790 ~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdina 826 (964)
+|+||||+||. .|+.++|++|+++ |||+|+
T Consensus 1 ~G~T~Lh~A~~-~g~~e~v~~Ll~~------gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAAS-NGNIEIVKYLLEH------GADVNA 30 (30)
T ss_pred CCCCHHHHHHH-hCCHHHHHHHHHc------CCCCCC
Confidence 48899999999 8999999999998 888874
|
|
| >KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.91 E-value=2.8e-05 Score=94.48 Aligned_cols=127 Identities=14% Similarity=0.057 Sum_probs=96.5
Q ss_pred HHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccccc
Q 002122 695 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 774 (964)
Q Consensus 695 lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~ 774 (964)
-...|+++|....|++.|+.......+.+..+ ..|.++||.|+.+.+.+++++||+.
T Consensus 28 ~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d-----~lGr~al~iai~nenle~~eLLl~~------------------ 84 (822)
T KOG3609|consen 28 GFLLAHENGDVPLVAKALEYKAVSKLNINCRD-----PLGRLALHIAIDNENLELQELLLDT------------------ 84 (822)
T ss_pred HHHHHHHcCChHHHHHHHHhccccccchhccC-----hHhhhceecccccccHHHHHHHhcC------------------
Confidence 34479999999999999986543333333333 3488999999999999999999998
Q ss_pred ccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCc----cccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 002122 775 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVG----IEAWKNARDSSGSTPEDYARLRGHYSYIHLV 850 (964)
Q Consensus 775 ~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg----~gAdinarD~~G~TPLh~A~~rGh~svv~LL 850 (964)
.... .-+|-+|.. .|...+|++|+.++.-.+ .+....+.-.-+.||+.+|+..+|++++++|
T Consensus 85 --------~~~~-----gdALL~aI~-~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~L 150 (822)
T KOG3609|consen 85 --------SSEE-----GDALLLAIA-VGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCL 150 (822)
T ss_pred --------cccc-----chHHHHHHH-HHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHH
Confidence 1122 237888999 899999999999853221 1122223445688999999999999999999
Q ss_pred HHhhhcCC
Q 002122 851 QKKINKRP 858 (964)
Q Consensus 851 ~~k~ak~~ 858 (964)
.+|++..+
T Consensus 151 l~kg~~i~ 158 (822)
T KOG3609|consen 151 LTRGHCIP 158 (822)
T ss_pred HHcCCCCC
Confidence 99998765
|
|
| >KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.74 E-value=2.4e-05 Score=96.57 Aligned_cols=88 Identities=28% Similarity=0.315 Sum_probs=80.2
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHh
Q 002122 732 LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 811 (964)
Q Consensus 732 l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lL 811 (964)
..|.++||.|+..+...++++||.+ |+ ++|..|..|+||||.+.. .|+...+.+|
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~-------ga-----------------~vn~~d~~g~~plh~~~~-~g~~~~~~~l 708 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQN-------GA-----------------DVNALDSKGRTPLHHATA-SGHTSIACLL 708 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhc-------CC-----------------cchhhhccCCCcchhhhh-hcccchhhhh
Confidence 3477999999999999999999999 88 899999999999999999 9999999999
Q ss_pred hcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 002122 812 TDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 850 (964)
Q Consensus 812 L~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL 850 (964)
++. +|+.++.|.+|.+|+++|....|.+++-++
T Consensus 709 l~~------~a~~~a~~~~~~~~l~~a~~~~~~d~~~l~ 741 (785)
T KOG0521|consen 709 LKR------GADPNAFDPDGKLPLDIAMEAANADIVLLL 741 (785)
T ss_pred ccc------cccccccCccCcchhhHHhhhccccHHHHH
Confidence 999 999999999999999999888666655444
|
|
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
Probab=97.61 E-value=2.1e-05 Score=94.49 Aligned_cols=66 Identities=23% Similarity=0.205 Sum_probs=62.5
Q ss_pred CCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCC-CCCCCHHHHHHHcCCHHHHHHHHHhhhc
Q 002122 784 PDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARD-SSGSTPEDYARLRGHYSYIHLVQKKINK 856 (964)
Q Consensus 784 pn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD-~~G~TPLh~A~~rGh~svv~LL~~k~ak 856 (964)
.|++|..|+|+||+|++ .+..++++.|+++ |++++.+| +.|+||||-|..+||.+.+-+|.++++.
T Consensus 45 anikD~~GR~alH~~~S-~~k~~~l~wLlqh------Gidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~S 111 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVS-ENKNSFLRWLLQH------GIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRS 111 (1267)
T ss_pred hhHHHhhccceeeeeec-cchhHHHHHHHhc------CceeeeccccccchHhhHhhhhchHHHHHHHHhcCCc
Confidence 68899999999999999 9999999999999 99999999 5899999999999999999999998763
|
|
| >KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00018 Score=74.94 Aligned_cols=65 Identities=20% Similarity=0.252 Sum_probs=62.5
Q ss_pred CCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccc-cccccCCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 002122 783 RPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIE-AWKNARDSSGSTPEDYARLRGHYSYIHLVQKKI 854 (964)
Q Consensus 783 dpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~g-AdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ 854 (964)
++|++|..|+|||+.||+ .|+.++|.+|+.+ | ||+-+.|..|.+.+.+|.+.|+.+++++|.+..
T Consensus 4 ~in~rD~fgWTalmcaa~-eg~~eavsyllgr------g~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~ 69 (223)
T KOG2384|consen 4 NINARDAFGWTALMCAAM-EGSNEAVSYLLGR------GVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEND 69 (223)
T ss_pred CccchhhhcchHHHHHhh-hcchhHHHHHhcc------CcccccccccccchHHHHHHhcChHHHHHHHHHHh
Confidence 689999999999999999 9999999999999 8 999999999999999999999999999999874
|
|
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
Probab=97.56 E-value=4.8e-05 Score=91.61 Aligned_cols=80 Identities=23% Similarity=0.220 Sum_probs=73.5
Q ss_pred hccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCC-CCChHHHHHHhhCCCHHHH
Q 002122 730 LALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGP-AGLTPIHIAAGKDGSEDVL 808 (964)
Q Consensus 730 ~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~-~G~TPLHiAA~~~G~~dVV 808 (964)
++..|.|+||.|+..+..++++.||.+ |+ +++.+|. .|.||||-|.. -|+.|++
T Consensus 48 kD~~GR~alH~~~S~~k~~~l~wLlqh-------Gi-----------------dv~vqD~ESG~taLHRaiy-yG~idca 102 (1267)
T KOG0783|consen 48 KDRYGRTALHIAVSENKNSFLRWLLQH-------GI-----------------DVFVQDEESGYTALHRAIY-YGNIDCA 102 (1267)
T ss_pred HHhhccceeeeeeccchhHHHHHHHhc-------Cc-----------------eeeeccccccchHhhHhhh-hchHHHH
Confidence 356699999999999999999999999 87 7788876 79999999999 9999999
Q ss_pred HHhhcCCCCCccccccccCCCCCCCHHHHHHH
Q 002122 809 DALTDDPGMVGIEAWKNARDSSGSTPEDYARL 840 (964)
Q Consensus 809 ~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~ 840 (964)
-+|+.+ |+....+|++|..||..-++
T Consensus 103 ~lLL~~------g~SL~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 103 SLLLSK------GRSLRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred HHHHhc------CCceEEecccCCCHHHHHhh
Confidence 999999 99999999999999998775
|
|
| >PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00014 Score=54.67 Aligned_cols=24 Identities=29% Similarity=0.385 Sum_probs=22.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHhcc
Q 002122 733 TELGLLHRAVRKNSRPLVDLLLRF 756 (964)
Q Consensus 733 ~G~TpLH~AVr~g~~e~VelLL~~ 756 (964)
.|+||||+|+.+|+.++|++||++
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ 24 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKH 24 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHC
Confidence 378999999999999999999999
|
Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A .... |
| >KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00032 Score=81.01 Aligned_cols=91 Identities=16% Similarity=0.206 Sum_probs=76.4
Q ss_pred cccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccc
Q 002122 690 RRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSEN 769 (964)
Q Consensus 690 ~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~ 769 (964)
+-+.+-||-+++.|+.++.-.||..+++.+. ..-..|.||||.|++.|..--+++|+-| ||
T Consensus 131 ~~LsrQLhasvRt~nlet~LRll~lGA~~N~--------~hpekg~TpLHvAAk~Gq~~Q~ElL~vY-------GA---- 191 (669)
T KOG0818|consen 131 KDLSKQLHSSVRTGNLETCLRLLSLGAQANF--------FHPEKGNTPLHVAAKAGQILQAELLAVY-------GA---- 191 (669)
T ss_pred HHHHHHHHHHhhcccHHHHHHHHHcccccCC--------CCcccCCchhHHHHhccchhhhhHHhhc-------cC----
Confidence 3457789999999999999999987665432 1123477999999999999999999999 99
Q ss_pred cccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhc
Q 002122 770 KALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 813 (964)
Q Consensus 770 ~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~ 813 (964)
||++.|..|+||+-+|-. .||.++.+-|++
T Consensus 192 -------------D~~a~d~~GmtP~~~AR~-~gH~~laeRl~e 221 (669)
T KOG0818|consen 192 -------------DPGAQDSSGMTPVDYARQ-GGHHELAERLVE 221 (669)
T ss_pred -------------CCCCCCCCCCcHHHHHHh-cCchHHHHHHHH
Confidence 999999999999999998 999888766654
|
|
| >KOG0522 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00022 Score=83.15 Aligned_cols=88 Identities=17% Similarity=0.205 Sum_probs=68.9
Q ss_pred hHHHHHHH-cCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 694 WLIEFSMD-HEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 694 ~lL~fAve-~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.+||.++- .++..+.+.|+.. +...++. .+..|.||||.||+-|+...++.||.+ ||
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~-~~~~id~-------~D~~g~TpLhlAV~Lg~~~~a~~Ll~a-------~A------- 79 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAK-VSLVIDR-------RDPPGRTPLHLAVRLGHVEAARILLSA-------GA------- 79 (560)
T ss_pred cccchhhhccchhhHHHHHhhh-hhceecc-------ccCCCCccHHHHHHhcCHHHHHHHHhc-------CC-------
Confidence 46888854 4566666666553 3222321 355678999999999999999999999 77
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcC
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDD 814 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~ 814 (964)
++..++..|+||||.|++ .|+..++..++.+
T Consensus 80 ----------dv~~kN~~gWs~L~EAv~-~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 80 ----------DVSIKNNEGWSPLHEAVS-TGNEQIITEVLRH 110 (560)
T ss_pred ----------CccccccccccHHHHHHH-cCCHHHHHHHHHH
Confidence 788899999999999999 9999888877765
|
|
| >KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00024 Score=83.18 Aligned_cols=91 Identities=21% Similarity=0.109 Sum_probs=70.9
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccc
Q 002122 694 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 773 (964)
Q Consensus 694 ~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv 773 (964)
.-|.-|+....+..+-+||.++-...++ ..-..-+|.|+||+|++.|++.+.++||=| |+
T Consensus 626 qqLl~A~~~~Dl~t~~lLLAhg~~~e~~-----~t~~~~~grt~LHLa~~~gnVvl~QLLiWy-------g~-------- 685 (749)
T KOG0705|consen 626 QQLLRAVAAEDLQTAILLLAHGSREEVN-----ETCGEGDGRTALHLAARKGNVVLAQLLIWY-------GV-------- 685 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCchhhh-----ccccCCCCcchhhhhhhhcchhHHHHHHHh-------Cc--------
Confidence 3455666666677777777765332222 111234578999999999999999999977 77
Q ss_pred cccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcC
Q 002122 774 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDD 814 (964)
Q Consensus 774 ~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~ 814 (964)
|+-++|..|+|||.+|-. .|..+++++|+.+
T Consensus 686 ---------dv~~rda~g~t~l~yar~-a~sqec~d~llq~ 716 (749)
T KOG0705|consen 686 ---------DVMARDAHGRTALFYARQ-AGSQECIDVLLQY 716 (749)
T ss_pred ---------cceecccCCchhhhhHhh-cccHHHHHHHHHc
Confidence 788899999999999999 9999999999998
|
|
| >PF13606 Ank_3: Ankyrin repeat | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00019 Score=53.48 Aligned_cols=24 Identities=25% Similarity=0.246 Sum_probs=22.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHhcc
Q 002122 733 TELGLLHRAVRKNSRPLVDLLLRF 756 (964)
Q Consensus 733 ~G~TpLH~AVr~g~~e~VelLL~~ 756 (964)
.|+||||+||+.|+.++|++||++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~ 24 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEH 24 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHc
Confidence 378999999999999999999999
|
|
| >KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00023 Score=81.81 Aligned_cols=87 Identities=17% Similarity=0.200 Sum_probs=71.3
Q ss_pred HHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccccc
Q 002122 695 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 774 (964)
Q Consensus 695 lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~ 774 (964)
.++||+..|....++.++-.+.+-. .++.+..|+||.|+..|++++|++||... +.
T Consensus 509 ~~~~aa~~GD~~alrRf~l~g~D~~---------~~DyD~RTaLHvAAaEG~v~v~kfl~~~~------kv--------- 564 (622)
T KOG0506|consen 509 NVMYAAKNGDLSALRRFALQGMDLE---------TKDYDDRTALHVAAAEGHVEVVKFLLNAC------KV--------- 564 (622)
T ss_pred hhhhhhhcCCHHHHHHHHHhccccc---------ccccccchhheeecccCceeHHHHHHHHH------cC---------
Confidence 5789999998888876654333211 13556789999999999999999999873 22
Q ss_pred ccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcC
Q 002122 775 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDD 814 (964)
Q Consensus 775 ~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~ 814 (964)
+|+.+|..|+|||--|-. .+|.+|+++|-+.
T Consensus 565 --------~~~~kDRw~rtPlDdA~~-F~h~~v~k~L~~~ 595 (622)
T KOG0506|consen 565 --------DPDPKDRWGRTPLDDAKH-FKHKEVVKLLEEA 595 (622)
T ss_pred --------CCChhhccCCCcchHhHh-cCcHHHHHHHHHH
Confidence 899999999999999999 9999999999876
|
|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.00036 Score=86.59 Aligned_cols=96 Identities=18% Similarity=0.149 Sum_probs=73.9
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHH
Q 002122 731 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDA 810 (964)
Q Consensus 731 ~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~l 810 (964)
...||++||+|+..+..-+++.|++.. |. .++.-|.+|.--+|++|. ++.+..-+
T Consensus 571 ~~r~~lllhL~a~~lyawLie~~~e~~------~~-----------------~~~eld~d~qgV~hfca~--lg~ewA~l 625 (975)
T KOG0520|consen 571 NFRDMLLLHLLAELLYAWLIEKVIEWA------GS-----------------GDLELDRDGQGVIHFCAA--LGYEWAFL 625 (975)
T ss_pred CCcchHHHHHHHHHhHHHHHHHHhccc------cc-----------------CchhhcccCCChhhHhhh--cCCceeEE
Confidence 456899999999999999999999861 11 334455566666788766 44455444
Q ss_pred h-hcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 811 L-TDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 811 L-L~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
| +-+ +..++.+|..|+||||||+.+||..++..|.+.++..
T Consensus 626 l~~~~------~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~ 667 (975)
T KOG0520|consen 626 PISAD------GVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADP 667 (975)
T ss_pred EEeec------ccccccccCCCCcccchHhhcCHHHHHHHHHHhcccc
Confidence 4 445 7788999999999999999999999999999877653
|
|
| >KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0007 Score=79.00 Aligned_cols=71 Identities=18% Similarity=0.221 Sum_probs=62.1
Q ss_pred CCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 783 RPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 783 dpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
+.-+.|++..|-||+||. .|+.+||++|++| |..--.++.|++|.|.||-|+..++..+.++|...++...
T Consensus 891 ~ll~~~~~~~sllh~a~~-tg~~eivkyildh----~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ 961 (1004)
T KOG0782|consen 891 SLLIQGPDHCSLLHYAAK-TGNGEIVKYILDH----GPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLR 961 (1004)
T ss_pred ceEeeCcchhhHHHHHHh-cCChHHHHHHHhc----CCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhhe
Confidence 445678899999999999 9999999999999 3344577889999999999999999999999999888654
|
|
| >KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0046 Score=75.88 Aligned_cols=91 Identities=24% Similarity=0.280 Sum_probs=67.4
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
+.+|+.|+++.+.+++..||+.-. ..| .+|..|++.+.+++|++||.+. + ++.. +..
T Consensus 63 r~al~iai~nenle~~eLLl~~~~---------------~~g-dALL~aI~~~~v~~VE~ll~~~-~----~~~~--~~~ 119 (822)
T KOG3609|consen 63 RLALHIAIDNENLELQELLLDTSS---------------EEG-DALLLAIAVGSVPLVELLLVHF-V----DAPY--LER 119 (822)
T ss_pred hhceecccccccHHHHHHHhcCcc---------------ccc-hHHHHHHHHHHHHHHHHHHhcc-c----ccch--hcc
Confidence 668999999999999999998421 114 7889999999999999999882 1 1110 000
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcC
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDD 814 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~ 814 (964)
.....+..|.| +.|||.+||. .++.+|+++|++.
T Consensus 120 -~~d~~~~~ft~------ditPliLAAh-~NnyEil~~Ll~k 153 (822)
T KOG3609|consen 120 -SGDANSPHFTP------DITPLMLAAH-LNNFEILQCLLTR 153 (822)
T ss_pred -ccccCcccCCC------CccHHHHHHH-hcchHHHHHHHHc
Confidence 12223334444 5799999999 9999999999986
|
|
| >KOG0511 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.01 Score=67.40 Aligned_cols=76 Identities=25% Similarity=0.330 Sum_probs=63.2
Q ss_pred CcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcC
Q 002122 735 LGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDD 814 (964)
Q Consensus 735 ~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~ 814 (964)
..-|+.|+|.|+.+.|+.|++. |. ++|.+|.....||.+|.. -||+++|++|+++
T Consensus 37 f~elceacR~GD~d~v~~LVet-------gv-----------------nVN~vD~fD~spL~lAsL-cGHe~vvklLLen 91 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVET-------GV-----------------NVNAVDRFDSSPLYLASL-CGHEDVVKLLLEN 91 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHh-------CC-----------------CcchhhcccccHHHHHHH-cCcHHHHHHHHHc
Confidence 3569999999999999999998 77 899999999999999999 9999999999999
Q ss_pred CCCCccccccccCC-CCCCCHHHHHHHcCC
Q 002122 815 PGMVGIEAWKNARD-SSGSTPEDYARLRGH 843 (964)
Q Consensus 815 p~~vg~gAdinarD-~~G~TPLh~A~~rGh 843 (964)
||--. +| -+|. --||++.+.+
T Consensus 92 ------GAiC~-rdtf~G~-RC~YgaLnd~ 113 (516)
T KOG0511|consen 92 ------GAICS-RDTFDGD-RCHYGALNDR 113 (516)
T ss_pred ------CCccc-ccccCcc-hhhhhhhhHH
Confidence 77443 44 3454 4477777543
|
|
| >KOG2505 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.0059 Score=71.16 Aligned_cols=81 Identities=16% Similarity=0.191 Sum_probs=67.5
Q ss_pred HHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCcccccccc
Q 002122 747 RPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNA 826 (964)
Q Consensus 747 ~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdina 826 (964)
...+++|.++ +. +.+|.|.|...+.---|+||+||. +|...+|.+||+. |+|+.+
T Consensus 404 p~~ie~lken-------~l-----------sgnf~~~pe~~~~ltsT~LH~aa~-qg~~k~v~~~Lee------g~Dp~~ 458 (591)
T KOG2505|consen 404 PDSIEALKEN-------LL-----------SGNFDVTPEANDYLTSTFLHYAAA-QGARKCVKYFLEE------GCDPST 458 (591)
T ss_pred hhHHHHHHhc-------CC-----------cccccccccccccccchHHHHHHh-cchHHHHHHHHHh------cCCchh
Confidence 4567788877 22 456888898888888999999999 9999999999999 999999
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 002122 827 RDSSGSTPEDYARLRGHYSYIHLVQKKIN 855 (964)
Q Consensus 827 rD~~G~TPLh~A~~rGh~svv~LL~~k~a 855 (964)
+|..|.||+.++. +.+|-...+..-+
T Consensus 459 kd~~Grtpy~ls~---nkdVk~~F~a~~~ 484 (591)
T KOG2505|consen 459 KDGAGRTPYSLSA---NKDVKSIFIARRV 484 (591)
T ss_pred cccCCCCcccccc---cHHHHHHHHHHHH
Confidence 9999999999987 6677666665443
|
|
| >KOG0511 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.0066 Score=68.82 Aligned_cols=56 Identities=25% Similarity=0.221 Sum_probs=53.2
Q ss_pred hHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 002122 793 TPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKIN 855 (964)
Q Consensus 793 TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~a 855 (964)
--|-.|+. .|..+.|+.|++. |.++|++|.+..+||-+|+.-||..++++|.+.|+
T Consensus 38 ~elceacR-~GD~d~v~~LVet------gvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGA 93 (516)
T KOG0511|consen 38 GELCEACR-AGDVDRVRYLVET------GVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGA 93 (516)
T ss_pred HHHHHHhh-cccHHHHHHHHHh------CCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCC
Confidence 35888988 9999999999998 99999999999999999999999999999999987
|
|
| >KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.01 Score=74.01 Aligned_cols=89 Identities=24% Similarity=0.228 Sum_probs=73.2
Q ss_pred ccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcc
Q 002122 689 LRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSE 768 (964)
Q Consensus 689 l~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~ 768 (964)
+....++||.|+..+|..++..||+.+.+. +. .+..|.+|||.+...|+...+.+|++. |+
T Consensus 653 ~~~~~s~lh~a~~~~~~~~~e~ll~~ga~v--------n~-~d~~g~~plh~~~~~g~~~~~~~ll~~-------~a--- 713 (785)
T KOG0521|consen 653 LCIGCSLLHVAVGTGDSGAVELLLQNGADV--------NA-LDSKGRTPLHHATASGHTSIACLLLKR-------GA--- 713 (785)
T ss_pred hhcccchhhhhhccchHHHHHHHHhcCCcc--------hh-hhccCCCcchhhhhhcccchhhhhccc-------cc---
Confidence 334578999999999999999999965431 11 345588999999999999999999998 88
Q ss_pred ccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHh
Q 002122 769 NKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 811 (964)
Q Consensus 769 ~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lL 811 (964)
++++.+++|.+||++|... .+.+++-+|
T Consensus 714 --------------~~~a~~~~~~~~l~~a~~~-~~~d~~~l~ 741 (785)
T KOG0521|consen 714 --------------DPNAFDPDGKLPLDIAMEA-ANADIVLLL 741 (785)
T ss_pred --------------cccccCccCcchhhHHhhh-ccccHHHHH
Confidence 8999999999999999884 666665544
|
|
| >smart00248 ANK ankyrin repeats | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.037 Score=36.94 Aligned_cols=23 Identities=43% Similarity=0.755 Sum_probs=17.1
Q ss_pred CChHHHHHHhhCCCHHHHHHhhcC
Q 002122 791 GLTPIHIAAGKDGSEDVLDALTDD 814 (964)
Q Consensus 791 G~TPLHiAA~~~G~~dVV~lLL~~ 814 (964)
|.||||+|+. .++.+++++|+++
T Consensus 2 ~~~~l~~~~~-~~~~~~~~~ll~~ 24 (30)
T smart00248 2 GRTPLHLAAE-NGNLEVVKLLLDK 24 (30)
T ss_pred CCCHHHHHHH-cCCHHHHHHHHHc
Confidence 5677777777 6777777777776
|
Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. |
| >KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.27 E-value=0.15 Score=53.81 Aligned_cols=61 Identities=18% Similarity=0.166 Sum_probs=55.1
Q ss_pred hccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHH
Q 002122 730 LALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLD 809 (964)
Q Consensus 730 ~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~ 809 (964)
.+..|+|+|+.|++.|+-+.|.+||.. |+. .|.+.|..|++++-+|-. .|+.++|.
T Consensus 8 rD~fgWTalmcaa~eg~~eavsyllgr-------g~a----------------~vgv~d~ssldaaqlaek-~g~~~fvh 63 (223)
T KOG2384|consen 8 RDAFGWTALMCAAMEGSNEAVSYLLGR-------GVA----------------FVGVTDESSLDAAQLAEK-GGAQAFVH 63 (223)
T ss_pred hhhhcchHHHHHhhhcchhHHHHHhcc-------Ccc----------------cccccccccchHHHHHHh-cChHHHHH
Confidence 356699999999999999999999999 732 788899999999999998 99999999
Q ss_pred HhhcC
Q 002122 810 ALTDD 814 (964)
Q Consensus 810 lLL~~ 814 (964)
.|-+.
T Consensus 64 ~lfe~ 68 (223)
T KOG2384|consen 64 SLFEN 68 (223)
T ss_pred HHHHH
Confidence 99886
|
|
| >KOG2505 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.16 E-value=0.14 Score=60.27 Aligned_cols=78 Identities=23% Similarity=0.278 Sum_probs=57.0
Q ss_pred hHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCC
Q 002122 705 CAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRP 784 (964)
Q Consensus 705 ~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdp 784 (964)
.+.|.+|.+.++.++.+.-... .+..--|+||+|+..|..++|.+||+. |+ ||
T Consensus 404 p~~ie~lken~lsgnf~~~pe~---~~~ltsT~LH~aa~qg~~k~v~~~Lee-------g~-----------------Dp 456 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEA---NDYLTSTFLHYAAAQGARKCVKYFLEE-------GC-----------------DP 456 (591)
T ss_pred hhHHHHHHhcCCcccccccccc---cccccchHHHHHHhcchHHHHHHHHHh-------cC-----------------Cc
Confidence 4456667777766654422111 122234999999999999999999999 76 89
Q ss_pred CcCCCCCChHHHHHHhhCCCHHHHHHhhc
Q 002122 785 DVIGPAGLTPIHIAAGKDGSEDVLDALTD 813 (964)
Q Consensus 785 n~~d~~G~TPLHiAA~~~G~~dVV~lLL~ 813 (964)
.++|..|+||-.+++- .||-..++.
T Consensus 457 ~~kd~~Grtpy~ls~n----kdVk~~F~a 481 (591)
T KOG2505|consen 457 STKDGAGRTPYSLSAN----KDVKSIFIA 481 (591)
T ss_pred hhcccCCCCccccccc----HHHHHHHHH
Confidence 9999999999999874 566555553
|
|
| >smart00248 ANK ankyrin repeats | Back alignment and domain information |
|---|
Probab=92.12 E-value=0.23 Score=32.96 Aligned_cols=27 Identities=26% Similarity=0.348 Sum_probs=23.8
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhhhc
Q 002122 830 SGSTPEDYARLRGHYSYIHLVQKKINK 856 (964)
Q Consensus 830 ~G~TPLh~A~~rGh~svv~LL~~k~ak 856 (964)
.|.||+|+|+..++.+++++|++.+.+
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~ 27 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGAD 27 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 478999999999999999999887653
|
Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 964 | ||||
| 1ul4_A | 94 | Solution Structure Of The Dna-Binding Domain Of Squ | 3e-26 | ||
| 1wj0_A | 60 | Solution Structure Of The Dna-Binding Domain Of Squ | 3e-24 | ||
| 1ul5_A | 88 | Solution Structure Of The Dna-binding Domain Of Squ | 1e-17 |
| >pdb|1UL4|A Chain A, Solution Structure Of The Dna-Binding Domain Of Squamosa Promoter Binding Protein-Like 4 Length = 94 | Back alignment and structure |
|
| >pdb|1WJ0|A Chain A, Solution Structure Of The Dna-Binding Domain Of Squamosa Promoter Binding Protein-Like 12 Lacking The Second Zinc- Binding Site Length = 60 | Back alignment and structure |
|
| >pdb|1UL5|A Chain A, Solution Structure Of The Dna-binding Domain Of Squamosa Promoter Binding Protein-like 7 Length = 88 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1ul4_A SPL4, squamosa promoter binding protein-like 4; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 Length = 94 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 2e-40
Identities = 57/91 (62%), Positives = 70/91 (76%)
Query: 142 GGSSSRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQ 201
GSS +CQV+ C AD+ AK YHRRHKVCE+H+KAS + + QRFCQQCSRFH LQ
Sbjct: 3 SGSSGLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQ 62
Query: 202 EFDEGKRSCRRRLAGHNKRRRKTNPDAVANG 232
EFDE KRSCRRRLAGHN+RRRK++ ++ +
Sbjct: 63 EFDEAKRSCRRRLAGHNERRRKSSGESGPSS 93
|
| >1ul5_A SPL7, squamosa promoter binding protein-like 7; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 Length = 88 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 1e-37
Identities = 43/87 (49%), Positives = 57/87 (65%)
Query: 146 SRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDE 205
S A CQV DC AD+S K YH+RH+VC + AS ++ +R+CQQC +FH+L +FDE
Sbjct: 2 SVARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDE 61
Query: 206 GKRSCRRRLAGHNKRRRKTNPDAVANG 232
GKRSCRR+L HN RR++ D
Sbjct: 62 GKRSCRRKLERHNNRRKRKPVDKGGVA 88
|
| >1wj0_A Squamosa promoter-binding protein-like 12; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 Length = 60 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 1e-32
Identities = 46/59 (77%), Positives = 52/59 (88%)
Query: 146 SRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFD 204
S CQV++CGADLS KDYHRRHKVCE+HSKA+ ALVG +MQRFCQQCSRFHVL+EFD
Sbjct: 2 SAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 60
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.5 bits (125), Expect = 7e-07
Identities = 88/608 (14%), Positives = 170/608 (27%), Gaps = 182/608 (29%)
Query: 411 DRIVFKLFGKEPNDFPL-VLRAQILDWLSHSPSDMESYIRPGCVILTIYLRQAEAAWEE- 468
D V K+ D P +L + +D + S + +R + L + E ++
Sbjct: 27 DAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR----LFWTLLSKQEEMVQKF 82
Query: 469 ----LCCDLTFSLSRLLDLSND-SFWTSGWVYARVQHQIAFIYNGQVVLDTSLPPRSNNY 523
L + F +S + S T ++ R + +YN V R Y
Sbjct: 83 VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDR-----LYNDNQVFAKYNVSRLQPY 137
Query: 524 SKI----LSVKP------------------IAVPASERAQ-FFVKGI---NLGRSAT--- 554
K+ L ++P + V S + Q I NL +
Sbjct: 138 LKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPET 197
Query: 555 ------RLLCAVEGKYM------------VQEATHEL---------------LDDVDGFK 581
+LL ++ + + EL L +V +
Sbjct: 198 VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV---Q 254
Query: 582 ELDELQCVNFSCSIPAVTGRGFIEIEDHGFSSTFFPFIVAEEDVCSEIRMLESALEFNRT 641
N SC I +T R F ++ D + I + ++
Sbjct: 255 NAKAWNAFNLSCKI-LLTTR-FKQVTD-----------FLSAATTTHISLDHHSMTLTPD 301
Query: 642 DADVERFGK-IDTKNQ--------------AM------DFIHEI-GWL------FHRSQS 673
+ K +D + Q ++ D + W
Sbjct: 302 EV-KSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIE 360
Query: 674 KSRLGHLDPNTDLFPLRR-FKWLIEFSMDHEWCAVVK---KLLHILLDGTVSLGEHPSLD 729
S L L+P R+ F L F LL ++ + +
Sbjct: 361 SS-LNVLEPAE----YRKMFDRLSVFPPS------AHIPTILLSLIWFDVIK--SDVMVV 407
Query: 730 LA-LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFR---PD 785
+ L + L+ + ++++ + + L ++ EN+ +H+ + P
Sbjct: 408 VNKLHKYSLVEKQPKESTISIPSIYLEL-------KVKLENEY---ALHRSIVDHYNIPK 457
Query: 786 VIGPAGLTPI--------HIA-----AGKDGSEDVLDALTDDPGMVG--IEAWKNARDSS 830
L P HI + + D + I A ++S
Sbjct: 458 TFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNAS 517
Query: 831 GSTPEDYARLRGHYSYI--------HLVQKKINKRPNGGHVVVDICGVVPDSNIYQKQ-N 881
GS +L+ + YI LV ++ P ++ +++ +
Sbjct: 518 GSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLI----CSKYTDLLRIALM 573
Query: 882 NESTASFE 889
E A FE
Sbjct: 574 AEDEAIFE 581
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 8e-06
Identities = 76/543 (13%), Positives = 160/543 (29%), Gaps = 185/543 (34%)
Query: 206 GKRSCRRRLAGH---NKRRRKTNPDAV-----ANGSSPNNDQTSGYLLISLLRILSNMHS 257
GK + +A + + + + N +SP +L LL + +
Sbjct: 162 GK-TW---VALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLE---MLQKLLYQIDPNWT 214
Query: 258 SRSDQRTDQDLLSHLLRGLASPAGENGGRGISGLLQE--HQDML----NERTSAGNSEVV 311
SRSD ++ L H ++ + LL+ +++ L N + N++
Sbjct: 215 SRSDHSSNIKLRIHSIQ-----------AELRRLLKSKPYENCLLVLLNVQ----NAKAW 259
Query: 312 QAFLANGQGCP----TPFRQQLNATVSEMPQQVSLPHDARG-AEDQDEDVERSPVPANLG 366
AF C T F+Q + + +SL H + D+ + +
Sbjct: 260 NAF---NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL---------- 306
Query: 367 TSSIDCPSWVRQDSQQSSPPQTSGNSDSASAQSPSSSSDAQSRTDRI----------VFK 416
++ Q P + + + S D + D + +
Sbjct: 307 -----LLKYLDCRP-QDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIE 360
Query: 417 LFGK--EPND----------FP-------LVLRAQILDWLSHSPSDMESYIRPGCVILTI 457
EP + FP ++L ++ W SD+ + ++
Sbjct: 361 SSLNVLEPAEYRKMFDRLSVFPPSAHIPTILL--SLI-WFDVIKSDVMV-VVNKLHKYSL 416
Query: 458 YLRQAEAAWEELCCDLTFSL-SRLLDL----SNDSFWTSGWVYARVQHQIAFI--YNGQV 510
+Q + T S+ S L+L N+ H+ + YN
Sbjct: 417 VEKQP--------KESTISIPSIYLELKVKLENE----------YALHRS-IVDHYNIPK 457
Query: 511 VLDTS--LPPRSNNYSKILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMVQE 568
D+ +PP + Y +G + ++
Sbjct: 458 TFDSDDLIPPYLDQYF---------------YSH------IG-------------HHLKN 483
Query: 569 ATHELLDDVDGFKELDELQCVNFSCSIPAVTGRGFIE--IEDHGFSSTFFPFIVAEEDVC 626
E + + F+ + ++F F+E I + I+ +
Sbjct: 484 I--EHPERMTLFRMV----FLDFR----------FLEQKIRHDSTAWNASGSIL---NTL 524
Query: 627 SEIRMLESALEFNRTDADVERFGKIDTKNQAMDFIHEIGWLFHRSQSKS--RLGHLDPNT 684
+++ + + N D ER N +DF+ +I S+ R+ + +
Sbjct: 525 QQLKFYKPYICDN--DPKYERL-----VNAILDFLPKIEENLICSKYTDLLRIALMAEDE 577
Query: 685 DLF 687
+F
Sbjct: 578 AIF 580
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 1e-04
Identities = 68/478 (14%), Positives = 128/478 (26%), Gaps = 170/478 (35%)
Query: 561 EGKYMVQEATHELLDDVDGFKELDELQCVNFSCSIPAVTGRGFIEIEDHG---FSSTFFP 617
E +Y ++ D F + NF C +++D S
Sbjct: 13 EHQYQYKDILSVFEDA---FVD-------NFDCK----------DVQDMPKSILSKEEID 52
Query: 618 FIVAEEDVCSEIRMLESALEFNRTDADVERF-GKIDTKNQAMDFIHEIGWLFHRSQSKSR 676
I+ +D S L L + + V++F ++ N +L +++ R
Sbjct: 53 HIIMSKDAVSGTLRLFWTLLSKQEEM-VQKFVEEVLRIN--------YKFLMSPIKTEQR 103
Query: 677 LGHLDP--NTDLF-----------------PLRRFK-------WLIEFSMDHEWCAVV-- 708
P T ++ + R + L+E + +
Sbjct: 104 ----QPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELR-PAKNVLIDGV 158
Query: 709 ----KKLL----------HILLDGTV---SLGEHPSLDLALTELGLLHRAVRKNSRPLVD 751
K + +D + +L S + L L L + N D
Sbjct: 159 LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218
Query: 752 LLLRFVPLEVSD------RLGSE---NKALV--DGVH-----KGFLFR------------ 783
+ L + RL L+ V F
Sbjct: 219 HSSN-IKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQV 277
Query: 784 PDVIGPAGLTPI---HIAAG--KDGSEDVL-------------DALTDDP---GMVG--- 819
D + A T I H + D + +L + LT +P ++
Sbjct: 278 TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESI 337
Query: 820 ------IEAWK--------NARDSSGS--TPEDYARLRGHYSYIHLVQK--KI------- 854
+ WK +SS + P +Y R + + + I
Sbjct: 338 RDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEY---RKMFDRLSVFPPSAHIPTILLSL 394
Query: 855 ---NKRPNGGHVVVDICGVVPDSNIYQKQNNESTASFEIGQTPVRPTQHNCKLCHQKL 909
+ + VVV+ ++ +KQ EST S ++ N H+ +
Sbjct: 395 IWFDVIKSDVMVVVNKL---HKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSI 449
|
| >2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 1e-06
Identities = 32/162 (19%), Positives = 49/162 (30%), Gaps = 35/162 (21%)
Query: 738 LHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPA---GLTP 794
LH A+ + + LV LL+ EN A V G F+ P G P
Sbjct: 105 LHIAIERRNMTLVTLLV-------------ENGADVQAAANGDFFKKTKGRPGFYFGELP 151
Query: 795 IHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKI 854
+ +AA ++ L + A +ARDS G+T + K
Sbjct: 152 LSLAACT-NQLAIVKFLLQNSWQ---PADISARDSVGNTVLHALVEVADN---TVDNTKF 204
Query: 855 NKRPNGGH--VVVDICGVVPDSNIYQKQNNESTASFEIGQTP 894
+ + + I N + G TP
Sbjct: 205 VTSMYNEILILGAKLHPTLKLEEI---TNRK-------GLTP 236
|
| >2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 1e-05
Identities = 34/133 (25%), Positives = 45/133 (33%), Gaps = 21/133 (15%)
Query: 706 AVVKKLLHILLDGTVSLGEHPSLDLALTELGL--LHRAVRKNSRPLVDLLLRFVPLEVSD 763
A + LL I D + G LH A+ K S V LL+
Sbjct: 60 ACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLV--------- 110
Query: 764 RLGSENKALVDGVHKGFLFRPDVIGPA--GLTPIHIAAGKDGSEDVLDALTDDPGMVGIE 821
EN A V G F+ G P+ +AA DV+ L ++P
Sbjct: 111 ----ENGADVHLRACGRFFQKHQGTCFYFGELPLSLAA-CTKQWDVVTYLLENPHQ---P 162
Query: 822 AWKNARDSSGSTP 834
A A DS G+T
Sbjct: 163 ASLEATDSLGNTV 175
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 2e-05
Identities = 17/130 (13%), Positives = 34/130 (26%), Gaps = 25/130 (19%)
Query: 738 LHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHI 797
L+ +VR L LL + +D + +G L +
Sbjct: 248 LYLSVRAAMVLLTKELL-----QKTDVFLIQACPYHNGTT------VLPDRVVWLDFVPA 296
Query: 798 AAGKDGSEDVLDALTDDPGMVGIE--AWKNARDSSGSTPEDYARLRGHYSYIH-LVQK-- 852
AA ++VL L E ++G+ + + + +
Sbjct: 297 AA-DPSKQEVLQLL--------QEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSA 347
Query: 853 KINKRPNGGH 862
+ R
Sbjct: 348 PVRTRSRSRA 357
|
| >3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 5e-05
Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 37/163 (22%)
Query: 738 LHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPA---GLTP 794
LH A+ + + V+LL+ E A V +G F+P G G P
Sbjct: 97 LHIAIERRCKHYVELLV-------------EKGADVHAQARGRFFQPKDEGGYFYFGELP 143
Query: 795 IHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKI 854
+ +AA ++ LT++ +A +DS G+T L H +
Sbjct: 144 LSLAA-CTNQPHIVHYLTENGHK---QADLRRQDSRGNTV-----L--HALVAIADNTRE 192
Query: 855 NKRPNGGHVVVDIC---GVVPDSNIYQKQNNESTASFEIGQTP 894
N + + + + PD+N+ NN+ G +P
Sbjct: 193 NTKFVTKMYDLLLIKCAKLFPDTNLEALLNND-------GLSP 228
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 16/109 (14%), Positives = 29/109 (26%), Gaps = 31/109 (28%)
Query: 738 LHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHI 797
LH A K +V LLL A D + +
Sbjct: 144 LHAAAWKGYADIVQLLL-------------AKGARTDLRNI-----------EKKLAFDM 179
Query: 798 AAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSY 846
A +L G +A + ++ ++ + L H+ +
Sbjct: 180 ATNA-ACASLLKKK------QGTDAVRTLSNAEDYLDDEDSDLEHHHHH 221
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 4e-04
Identities = 20/106 (18%), Positives = 38/106 (35%), Gaps = 30/106 (28%)
Query: 738 LHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHI 797
LH A ++ + + L +N+ V+G+ K G T ++
Sbjct: 77 LHEAAKRGNLSWLRECL-------------DNRVGVNGLDKA-----------GSTALYW 112
Query: 798 AAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGH 843
A G +D+++ L P N ++ G T A +G+
Sbjct: 113 AC-HGGHKDIVEMLFTQPN-----IELNQQNKLGDTALHAAAWKGY 152
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 5e-04
Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 31/122 (25%)
Query: 738 LHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHI 797
LH A + LV LL +++A V+ K G +P+H
Sbjct: 315 LHVASHYGNIKLVKFLL-------------QHQADVNAKTKL-----------GYSPLHQ 350
Query: 798 AAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857
AA + G D++ L + A N S G+TP A+ G+ S +++ ++
Sbjct: 351 AAQQ-GHTDIVTLL------LKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDET 403
Query: 858 PN 859
Sbjct: 404 SF 405
|
| >3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183 | Back alignment and structure |
|---|
Score = 40.9 bits (97), Expect = 6e-04
Identities = 26/108 (24%), Positives = 35/108 (32%), Gaps = 34/108 (31%)
Query: 738 LHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHI 797
L S V LL E A +D H+ GLT +H+
Sbjct: 80 LLFVAGLGSDKCVRLLA-------------EAGADLD--HRDMRG--------GLTALHM 116
Query: 798 AAGKDGSEDVLDALTDDPGMVGIE--AWKNARDSSGSTPEDYARLRGH 843
AAG +V++AL +E A D G T + AR
Sbjct: 117 AAGY-VRPEVVEAL--------VELGADIEVEDERGLTALELAREILK 155
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 7e-04
Identities = 27/131 (20%), Positives = 40/131 (30%), Gaps = 27/131 (20%)
Query: 738 LHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHI 797
A + L + A V+ K + + G T +
Sbjct: 109 FMEAAVYGKVKALKFLY-------------KRGANVNLRRKTKE-DQERLRKGGATALMD 154
Query: 798 AAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK----- 852
AA K G +VL L D+ G A NA D+ G +A L S + +
Sbjct: 155 AAEK-GHVEVLKILLDEMG-----ADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH 208
Query: 853 --KINKRPNGG 861
+N R G
Sbjct: 209 GADVNVRGERG 219
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 964 | |||
| 1ul4_A | 94 | SPL4, squamosa promoter binding protein-like 4; tr | 100.0 | |
| 1ul5_A | 88 | SPL7, squamosa promoter binding protein-like 7; tr | 100.0 | |
| 1wj0_A | 60 | Squamosa promoter-binding protein-like 12; DNA-bin | 99.94 | |
| 1oy3_D | 282 | Transcription factor inhibitor I-kappa-B-beta; pro | 99.89 | |
| 4gpm_A | 169 | Engineered protein OR264; de novo protein, structu | 99.89 | |
| 2rfa_A | 232 | Transient receptor potential cation channel subfa | 99.87 | |
| 2f8y_A | 223 | Notch homolog 1, translocation-associated (drosoph | 99.87 | |
| 2dzn_A | 228 | Probable 26S proteasome regulatory subunit P28; an | 99.86 | |
| 1k1a_A | 241 | B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa | 99.86 | |
| 2xai_A | 261 | ASB-9, ankyrin repeat and SOCS box protein 9; tran | 99.86 | |
| 1yyh_A | 253 | HN1;, notch 1, ankyrin domain; ankyrin repeats, ce | 99.86 | |
| 3hra_A | 201 | Ankyrin repeat family protein; structural protein; | 99.86 | |
| 3b7b_A | 237 | Euchromatic histone-lysine N-methyltransferase 1; | 99.86 | |
| 3aji_A | 231 | 26S proteasome non-ATPase regulatory subunit 10; g | 99.86 | |
| 1yyh_A | 253 | HN1;, notch 1, ankyrin domain; ankyrin repeats, ce | 99.86 | |
| 3aji_A | 231 | 26S proteasome non-ATPase regulatory subunit 10; g | 99.86 | |
| 3v31_A | 167 | Ankyrin repeat family A protein 2; structural geno | 99.85 | |
| 3v30_A | 172 | DNA-binding protein rfxank; structural genomics co | 99.85 | |
| 3utm_A | 351 | Tankyrase-1; tankyrase, TNKS, ankryin repeat clust | 99.85 | |
| 1ikn_D | 236 | Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 | 99.85 | |
| 3ljn_A | 364 | Hypothetical protein; ankyrin, structural genomics | 99.85 | |
| 4b93_B | 269 | Ankyrin repeat domain-containing protein 27; endoc | 99.85 | |
| 1ihb_A | 162 | P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit | 99.84 | |
| 2rfm_A | 192 | Putative ankyrin repeat protein TV1425; ANK repeat | 99.84 | |
| 2etb_A | 256 | Transient receptor potential cation channel subfam | 99.84 | |
| 3d9h_A | 285 | CDNA FLJ77766, highly similar to HOMO sapiens anky | 99.84 | |
| 3jxi_A | 260 | Vanilloid receptor-related osmotically activated p | 99.84 | |
| 1wdy_A | 285 | 2-5A-dependent ribonuclease; hydrolase, RNA-bindin | 99.84 | |
| 2f8y_A | 223 | Notch homolog 1, translocation-associated (drosoph | 99.84 | |
| 2y1l_E | 169 | Darpin-8.4; hydrolase-inhibitor complex, DEVD darp | 99.84 | |
| 1k1a_A | 241 | B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa | 99.84 | |
| 2fo1_E | 373 | LIN-12 protein; beta-barrel, protein-DNA complex, | 99.84 | |
| 2rfa_A | 232 | Transient receptor potential cation channel subfa | 99.83 | |
| 4gpm_A | 169 | Engineered protein OR264; de novo protein, structu | 99.83 | |
| 1awc_B | 153 | Protein (GA binding protein beta 1); complex (tran | 99.83 | |
| 4hbd_A | 276 | KN motif and ankyrin repeat domain-containing Pro; | 99.83 | |
| 3b7b_A | 237 | Euchromatic histone-lysine N-methyltransferase 1; | 99.83 | |
| 1n11_A | 437 | Ankyrin; clathrin, BAND 3, anion exchanger, struct | 99.83 | |
| 2pnn_A | 273 | Transient receptor potential cation channel subfa | 99.83 | |
| 1n11_A | 437 | Ankyrin; clathrin, BAND 3, anion exchanger, struct | 99.83 | |
| 1d9s_A | 136 | Cyclin-dependent kinase 4 inhibitor B; helix-turn- | 99.83 | |
| 4b93_B | 269 | Ankyrin repeat domain-containing protein 27; endoc | 99.83 | |
| 2jab_A | 136 | H10-2-G3; HER2, darpin, ankyrin repeat protein, me | 99.83 | |
| 3twr_A | 165 | Tankyrase-2; ankyrin repeat, protein-protein inter | 99.82 | |
| 1n0r_A | 126 | 4ANK, 4 ankyrin repeats; structural protein; 1.50A | 99.82 | |
| 1s70_B | 299 | 130 kDa myosin-binding subunit of smooth muscle my | 99.82 | |
| 1oy3_D | 282 | Transcription factor inhibitor I-kappa-B-beta; pro | 99.81 | |
| 4g8k_A | 337 | 2-5A-dependent ribonuclease; ankyrin-repeat domain | 99.81 | |
| 1wdy_A | 285 | 2-5A-dependent ribonuclease; hydrolase, RNA-bindin | 99.81 | |
| 3f6q_A | 179 | Integrin-linked protein kinase; ILK, integrin-link | 99.81 | |
| 1s70_B | 299 | 130 kDa myosin-binding subunit of smooth muscle my | 99.81 | |
| 1bi7_B | 156 | P16INK4A, MTS1, multiple tumor suppressor; cyclin | 99.81 | |
| 3kea_A | 285 | K1L; tropism, ANK repeat, viral protein; 2.30A {Va | 99.81 | |
| 2dzn_A | 228 | Probable 26S proteasome regulatory subunit P28; an | 99.8 | |
| 2etb_A | 256 | Transient receptor potential cation channel subfam | 99.8 | |
| 3d9h_A | 285 | CDNA FLJ77766, highly similar to HOMO sapiens anky | 99.8 | |
| 1bd8_A | 156 | P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr | 99.8 | |
| 3eu9_A | 240 | Huntingtin-interacting protein 14; epigenetics, an | 99.8 | |
| 3twr_A | 165 | Tankyrase-2; ankyrin repeat, protein-protein inter | 99.8 | |
| 1awc_B | 153 | Protein (GA binding protein beta 1); complex (tran | 99.8 | |
| 2xai_A | 261 | ASB-9, ankyrin repeat and SOCS box protein 9; tran | 99.8 | |
| 2pnn_A | 273 | Transient receptor potential cation channel subfa | 99.79 | |
| 3eu9_A | 240 | Huntingtin-interacting protein 14; epigenetics, an | 99.79 | |
| 3v30_A | 172 | DNA-binding protein rfxank; structural genomics co | 99.79 | |
| 3ljn_A | 364 | Hypothetical protein; ankyrin, structural genomics | 99.79 | |
| 3f6q_A | 179 | Integrin-linked protein kinase; ILK, integrin-link | 99.79 | |
| 1ikn_D | 236 | Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 | 99.79 | |
| 2y1l_E | 169 | Darpin-8.4; hydrolase-inhibitor complex, DEVD darp | 99.79 | |
| 3hra_A | 201 | Ankyrin repeat family protein; structural protein; | 99.79 | |
| 3utm_A | 351 | Tankyrase-1; tankyrase, TNKS, ankryin repeat clust | 99.79 | |
| 2rfm_A | 192 | Putative ankyrin repeat protein TV1425; ANK repeat | 99.79 | |
| 3v31_A | 167 | Ankyrin repeat family A protein 2; structural geno | 99.78 | |
| 1ycs_B | 239 | 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres | 99.78 | |
| 1ihb_A | 162 | P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit | 99.78 | |
| 3jxi_A | 260 | Vanilloid receptor-related osmotically activated p | 99.78 | |
| 2fo1_E | 373 | LIN-12 protein; beta-barrel, protein-DNA complex, | 99.78 | |
| 3c5r_A | 137 | BARD-1, BRCA1-associated ring domain protein 1; an | 99.77 | |
| 4g8k_A | 337 | 2-5A-dependent ribonuclease; ankyrin-repeat domain | 99.77 | |
| 1n0q_A | 93 | 3ANK, 3 ankyrin repeats; structural protein; 1.26A | 99.77 | |
| 3aaa_C | 123 | Myotrophin, protein V-1; actin capping protein, ba | 99.77 | |
| 1bd8_A | 156 | P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr | 99.77 | |
| 1dcq_A | 278 | PYK2-associated protein beta; zinc-binding module, | 99.76 | |
| 3kea_A | 285 | K1L; tropism, ANK repeat, viral protein; 2.30A {Va | 99.76 | |
| 2vge_A | 229 | RELA-associated inhibitor; iaspp, nucleus, apoptos | 99.74 | |
| 1sw6_A | 327 | Regulatory protein SWI6; transcription regulation, | 99.74 | |
| 3deo_A | 183 | Signal recognition particle 43 kDa protein; chloro | 99.74 | |
| 3t8k_A | 186 | Uncharacterized protein; structural genomics, PSI- | 99.74 | |
| 4hbd_A | 276 | KN motif and ankyrin repeat domain-containing Pro; | 99.74 | |
| 1ycs_B | 239 | 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres | 99.74 | |
| 3ehr_A | 222 | Osteoclast-stimulating factor 1; beta barrel, heli | 99.74 | |
| 3ui2_A | 244 | Signal recognition particle 43 kDa protein, chlor; | 99.73 | |
| 3lvq_E | 497 | ARF-GAP with SH3 domain, ANK repeat and PH domain | 99.73 | |
| 2b0o_E | 301 | UPLC1; arfgap, structural genomics, structural gen | 99.72 | |
| 1sw6_A | 327 | Regulatory protein SWI6; transcription regulation, | 99.7 | |
| 3jue_A | 368 | Arfgap with coiled-coil, ANK repeat and PH domain | 99.69 | |
| 3c5r_A | 137 | BARD-1, BRCA1-associated ring domain protein 1; an | 99.67 | |
| 2l6b_A | 115 | NR1C; ankyrin, consensus, repeat protein, ising mo | 99.67 | |
| 3aaa_C | 123 | Myotrophin, protein V-1; actin capping protein, ba | 99.66 | |
| 1bi7_B | 156 | P16INK4A, MTS1, multiple tumor suppressor; cyclin | 99.66 | |
| 2zgd_A | 110 | 3 repeat synthetic ankyrin; ankyrin repeat, hydrox | 99.63 | |
| 2jab_A | 136 | H10-2-G3; HER2, darpin, ankyrin repeat protein, me | 99.62 | |
| 3t8k_A | 186 | Uncharacterized protein; structural genomics, PSI- | 99.62 | |
| 1d9s_A | 136 | Cyclin-dependent kinase 4 inhibitor B; helix-turn- | 99.62 | |
| 2vge_A | 229 | RELA-associated inhibitor; iaspp, nucleus, apoptos | 99.6 | |
| 1n0r_A | 126 | 4ANK, 4 ankyrin repeats; structural protein; 1.50A | 99.6 | |
| 3ehr_A | 222 | Osteoclast-stimulating factor 1; beta barrel, heli | 99.58 | |
| 2l6b_A | 115 | NR1C; ankyrin, consensus, repeat protein, ising mo | 99.58 | |
| 2b0o_E | 301 | UPLC1; arfgap, structural genomics, structural gen | 99.56 | |
| 2aja_A | 376 | Ankyrin repeat family protein; NESG, Q5ZSV0, struc | 99.55 | |
| 1n0q_A | 93 | 3ANK, 3 ankyrin repeats; structural protein; 1.26A | 99.55 | |
| 2aja_A | 376 | Ankyrin repeat family protein; NESG, Q5ZSV0, struc | 99.53 | |
| 3deo_A | 183 | Signal recognition particle 43 kDa protein; chloro | 99.53 | |
| 3ui2_A | 244 | Signal recognition particle 43 kDa protein, chlor; | 99.49 | |
| 3lvq_E | 497 | ARF-GAP with SH3 domain, ANK repeat and PH domain | 99.44 | |
| 3jue_A | 368 | Arfgap with coiled-coil, ANK repeat and PH domain | 99.35 | |
| 1dcq_A | 278 | PYK2-associated protein beta; zinc-binding module, | 99.32 | |
| 2zgd_A | 110 | 3 repeat synthetic ankyrin; ankyrin repeat, hydrox | 99.32 |
| >1ul4_A SPL4, squamosa promoter binding protein-like 4; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-39 Score=292.52 Aligned_cols=91 Identities=63% Similarity=1.065 Sum_probs=80.5
Q ss_pred CCCCCCCCceeccCCchhhccChhhhcccccchhhcCcceeeeCCcchhhhhhhccCcccccccCccchHHHHHhhhhhh
Q 002122 141 GGGSSSRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKR 220 (964)
Q Consensus 141 ~~~~~~~~~Cqv~gC~~~l~~~k~y~~R~~vC~~H~ka~~v~~~G~~~RfCQqC~rfh~l~eFd~~krsCr~~L~~hn~r 220 (964)
++++++.++||||||++||+.+|.||+||||||.|+||++|+++|+++||||||+|||+|+|||++|||||+||++||+|
T Consensus 2 ~~~~~~~~~CqV~GC~~dL~~~k~Y~rR~rvCe~H~ka~~V~~~G~~~RFCQQCsrFH~L~eFD~~kRSCR~rL~~hn~R 81 (94)
T 1ul4_A 2 SSGSSGLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNER 81 (94)
T ss_dssp ------CCCCSSTTCCCCCTTCCHHHHHTTCCHHHHTCSCEEETTEEEEECTTTSSEEETTTCCSSCCSCSTTTTCCCCC
T ss_pred CCCCCCCCceecCCCCcchhhHHHHHHhhhhhHHHhcCCEEEECChhHHHHHHHhccCCHHHhccccchHHHHHHHHHHH
Confidence 35677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCC
Q 002122 221 RRKTNPDAVAN 231 (964)
Q Consensus 221 rr~~~~~~~~~ 231 (964)
|||+++++...
T Consensus 82 RRk~~~~~~~~ 92 (94)
T 1ul4_A 82 RRKSSGESGPS 92 (94)
T ss_dssp CCSCCCC----
T ss_pred hccCCCCcCCC
Confidence 99999987653
|
| >1ul5_A SPL7, squamosa promoter binding protein-like 7; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-38 Score=281.14 Aligned_cols=83 Identities=52% Similarity=0.962 Sum_probs=79.5
Q ss_pred CCCceeccCCchhhccChhhhcccccchhhcCcceeeeCCcchhhhhhhccCcccccccCccchHHHHHhhhhhhhccCC
Q 002122 146 SRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTN 225 (964)
Q Consensus 146 ~~~~Cqv~gC~~~l~~~k~y~~R~~vC~~H~ka~~v~~~G~~~RfCQqC~rfh~l~eFd~~krsCr~~L~~hn~rrr~~~ 225 (964)
+.++||||||++||+.+|+||+||||||.|+||++|+++|+++||||||+|||+|+|||++|||||+||++||+||||++
T Consensus 2 ~~~~CqV~GC~~dLs~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQC~rFH~L~eFD~~kRSCR~rL~~hn~RRR~~~ 81 (88)
T 1ul5_A 2 SVARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKP 81 (88)
T ss_dssp -CCSCEETTEECCCSSCCSSSGGGTCCHHHHHHSEEEETTEEEEECTTTSSEEEGGGBCSSTTSBSSSCCCSSSCCCCCS
T ss_pred CCCeeecCCCCCChhHhhHHHhhccccHHHcCCCEEEECCEeeHHHHHhccccChhhhccccchHHHHHHHHHHHhccCC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCC
Q 002122 226 PDA 228 (964)
Q Consensus 226 ~~~ 228 (964)
++.
T Consensus 82 ~~~ 84 (88)
T 1ul5_A 82 VDK 84 (88)
T ss_dssp CSS
T ss_pred ccC
Confidence 775
|
| >1wj0_A Squamosa promoter-binding protein-like 12; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 | Back alignment and structure |
|---|
Probab=99.94 E-value=8.1e-29 Score=208.93 Aligned_cols=59 Identities=78% Similarity=1.372 Sum_probs=57.1
Q ss_pred CCCceeccCCchhhccChhhhcccccchhhcCcceeeeCCcchhhhhhhccCccccccc
Q 002122 146 SRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFD 204 (964)
Q Consensus 146 ~~~~Cqv~gC~~~l~~~k~y~~R~~vC~~H~ka~~v~~~G~~~RfCQqC~rfh~l~eFd 204 (964)
+.++|||+||++||+.+|+|||||||||.|+||++|+++|.++||||||+|||+|+|||
T Consensus 2 ~~~~CqV~gC~~dl~~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQCsrFH~L~eFD 60 (60)
T 1wj0_A 2 SAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 60 (60)
T ss_dssp -CEECSSTTCCCEETSCCSSTTTTTCCHHHHTCSCEEETTEEECCCSSSCSCCBTTSCC
T ss_pred CCceeecCCCCcChhHhHHHhhccccChhHcCCCEEEECCEEEehhhhccCccCcccCC
Confidence 46899999999999999999999999999999999999999999999999999999998
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D | Back alignment and structure |
|---|
Probab=99.89 E-value=8.1e-23 Score=210.33 Aligned_cols=214 Identities=18% Similarity=0.101 Sum_probs=162.8
Q ss_pred CCCcceeecchhhhhHHHHHHHHhhhcCcc---hhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcC
Q 002122 613 STFFPFIVAEEDVCSEIRMLESALEFNRTD---ADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFP 688 (964)
Q Consensus 613 s~ffP~LVad~~iCsEI~~LE~~le~~a~~---~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~q 688 (964)
.+..|+++|... +.+..++.+++.++.. ...+..|.+++|.+| .+.+..+.+|++++......+
T Consensus 8 ~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~---------- 75 (282)
T 1oy3_D 8 DGDTALHLAVIH--QHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAE---------- 75 (282)
T ss_dssp TCCCHHHHHHHT--TCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCC----------
T ss_pred CCCcHHHHHHHc--CCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC----------
Confidence 347899987765 7788888899887762 233567899999999 588899999999875332222
Q ss_pred ccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC--------------------------------------CCchhh
Q 002122 689 LRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE--------------------------------------HPSLDL 730 (964)
Q Consensus 689 l~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~--------------------------------------~~~le~ 730 (964)
....+|||+|+..++.+++++|++........... ......
T Consensus 76 -~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (282)
T 1oy3_D 76 -RGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAE 154 (282)
T ss_dssp -TTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCC
T ss_pred -CCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCc
Confidence 23578999999999999999999865432110000 000112
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCC-CCChHHHHHHhhCCCHHHHH
Q 002122 731 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGP-AGLTPIHIAAGKDGSEDVLD 809 (964)
Q Consensus 731 ~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~-~G~TPLHiAA~~~G~~dVV~ 809 (964)
+..|.||||+|++.|+.++|++||++ |+ ++|..+. .|.||||+|+. .|+.++|+
T Consensus 155 ~~~g~t~L~~A~~~g~~~~v~~Ll~~-------g~-----------------~~~~~~~~~g~tpL~~A~~-~~~~~~v~ 209 (282)
T 1oy3_D 155 NYDGHTPLHVAVIHKDAEMVRLLRDA-------GA-----------------DLNKPEPTCGRTPLHLAVE-AQAASVLE 209 (282)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHH-------TC-----------------CTTCCCTTTCCCHHHHHHH-TTCHHHHH
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCCCCCCCCcCHHHHHHH-cCCHHHHH
Confidence 44688999999999999999999999 77 7888875 49999999999 99999999
Q ss_pred HhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCCC---CCCceeecCCC
Q 002122 810 ALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPN---GGHVVVDICGV 870 (964)
Q Consensus 810 lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~~---~~~v~v~ip~~ 870 (964)
+|+++ |++++.+|..|.||||+|+.+|+.+++++|.+++++... .+.+.+.+...
T Consensus 210 ~Ll~~------gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 210 LLLKA------GADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGS 267 (282)
T ss_dssp HHHHT------TCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC------------
T ss_pred HHHHc------CCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCC
Confidence 99999 999999999999999999999999999999999987542 34555555443
|
| >4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=201.85 Aligned_cols=155 Identities=23% Similarity=0.209 Sum_probs=127.7
Q ss_pred cHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhc
Q 002122 653 TKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLA 731 (964)
Q Consensus 653 ~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~ 731 (964)
+..+| .+.+..+.+||+++......+ ...+++|++|+..++..+++.||+.+++.+ ..+
T Consensus 8 L~~Aa~~G~~~~v~~Ll~~Gadvn~~d-----------~~g~t~l~~a~~~~~~~~~~~ll~~gad~~---------~~d 67 (169)
T 4gpm_A 8 LIEAAENGNKDRVKDLIENGADVNASD-----------SDGRTPLHHAAENGHKEVVKLLISKGADVN---------AKD 67 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCC
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcC-----------CCCCCHHHHHHHcCCHHHHHHHHhcccchh---------hhc
Confidence 34455 366667777777764322222 235789999999999999999999654322 135
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHh
Q 002122 732 LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 811 (964)
Q Consensus 732 l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lL 811 (964)
..|+||||+|++.|+.++|++||++ |+ ++|.+|..|+||||+||. .|+.++|++|
T Consensus 68 ~~g~TpLh~A~~~g~~~~v~~Ll~~-------ga-----------------dvn~~d~~G~TpLh~A~~-~g~~~~v~~L 122 (169)
T 4gpm_A 68 SDGRTPLHHAAENGHKEVVKLLISK-------GA-----------------DVNAKDSDGRTPLHHAAE-NGHKEVVKLL 122 (169)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHHC-------cC-----------------CCCCCCCCCCCHHHHHHH-cCCHHHHHHH
Confidence 5689999999999999999999999 88 899999999999999999 9999999999
Q ss_pred hcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 812 TDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 812 L~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
+++ ||+++.+|.+|.||||+|+.+|+.+++++|++++++..
T Consensus 123 l~~------gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 123 ISK------GADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp HHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred HHc------CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 999 99999999999999999999999999999999999875
|
| >2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=195.16 Aligned_cols=192 Identities=17% Similarity=0.123 Sum_probs=162.2
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhccccc-ccccCCCCCCCCCcCccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQS-KSRLGHLDPNTDLFPLRR 691 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~-~~~~~~~d~~l~l~ql~R 691 (964)
+..|+++|... ..+..++.+++.++.....+..|.+++|.++ .+.+..+.+|+++... ... ....
T Consensus 25 g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-----------~~~~ 91 (223)
T 2f8y_A 25 GETALHLAARY--SRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDA-----------RMHD 91 (223)
T ss_dssp CCCHHHHHHHT--TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTC-----------CCTT
T ss_pred CCchHHHHHHc--CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc-----------CCCC
Confidence 47788887654 7788899999988876655678899999999 4788888999887631 111 1123
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++||+|+..++.++++.|++..++.+ ..+..|.||||+|+..|+.++|++|+++ |+
T Consensus 92 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 149 (223)
T 2f8y_A 92 GTTPLILAARLAVEGMLEDLINSHADVN---------AVDDLGKSALHWAAAVNNVDAAVVLLKN-------GA------ 149 (223)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTT---------CBCTTSCBHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred CCcHHHHHHHhCcHHHHHHHHHcCCCCc---------CcCCCCCcHHHHHHHcCCHHHHHHHHHc-------CC------
Confidence 4789999999999999999999654321 1245688999999999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
++|..+..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+.+||.+++++|.
T Consensus 150 -----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~ 211 (223)
T 2f8y_A 150 -----------NKDMQNNREETPLFLAAR-EGSYETAKVLLDH------FANRDITDHMDRLPRDIAQERMHHDIVRLLD 211 (223)
T ss_dssp -----------CTTCCCTTCCCHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCCcCCCCcCHHHHHHH-cCCHHHHHHHHHc------CCCCccccccCCCHHHHHHHhcchHHHHHHH
Confidence 889999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcCC
Q 002122 852 KKINKRP 858 (964)
Q Consensus 852 ~k~ak~~ 858 (964)
++++...
T Consensus 212 ~~g~~~~ 218 (223)
T 2f8y_A 212 EYNLVRS 218 (223)
T ss_dssp HTTCSSC
T ss_pred HcCCCcc
Confidence 9988654
|
| >2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A | Back alignment and structure |
|---|
Probab=99.86 E-value=4.1e-21 Score=192.41 Aligned_cols=195 Identities=18% Similarity=0.105 Sum_probs=158.3
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcCcchh-hhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 615 FFPFIVAEEDVCSEIRMLESALEFNRTDAD-VERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 615 ffP~LVad~~iCsEI~~LE~~le~~a~~~~-~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
.+|++.|... +.+..++.+++.+..... .+..|.+++|.++ .+.+..+.||++++...... .......
T Consensus 3 ~t~L~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--------~~~~~~g 72 (228)
T 2dzn_A 3 NYPLHQACME--NEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD--------DYPDDSG 72 (228)
T ss_dssp CCHHHHHHHT--TCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGG--------GCCCTTS
T ss_pred ccHHHHHHHh--CCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccc--------ccCCCCC
Confidence 4577776554 778888888888765543 4567899999999 48888899998887321111 1122235
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++||+|+..|+.++++.|++......++ ..+..|.||||+|++.++.+++++|+++ |+
T Consensus 73 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~------- 131 (228)
T 2dzn_A 73 WTPFHIACSVGNLEVVKSLYDRPLKPDLN-------KITNQGVTCLHLAVGKKWFEVSQFLIEN-------GA------- 131 (228)
T ss_dssp CCHHHHHHHHCCHHHHHHHHSSSSCCCTT-------CCCTTCCCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCcccc-------cCCcCCCCHHHHHHHcCCHhHHHHHHHc-------CC-------
Confidence 78999999999999999999964211111 1245688999999999999999999999 77
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccc-cccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIE-AWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~g-AdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
+++.++..|.||||+|+. .|+.+++++|+++ + ++++.+|..|.||||+|+..|+.+++++|.
T Consensus 132 ----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 194 (228)
T 2dzn_A 132 ----------SVRIKDKFNQIPLHRAAS-VGSLKLIELLCGL------GKSAVNWQDKQGWTPLFHALAEGHGDAAVLLV 194 (228)
T ss_dssp ----------CSCCCCTTSCCHHHHHHH-TTCHHHHHHHHTT------TCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ----------CccccCCCCCCHHHHHHH-cCCHHHHHHHHhc------CcccccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 889999999999999999 9999999999999 8 999999999999999999999999999999
Q ss_pred -HhhhcC
Q 002122 852 -KKINKR 857 (964)
Q Consensus 852 -~k~ak~ 857 (964)
+++++.
T Consensus 195 ~~~ga~~ 201 (228)
T 2dzn_A 195 EKYGAEY 201 (228)
T ss_dssp HHHCCCS
T ss_pred HhcCCCC
Confidence 777654
|
| >1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A | Back alignment and structure |
|---|
Probab=99.86 E-value=4.2e-21 Score=193.54 Aligned_cols=195 Identities=19% Similarity=0.167 Sum_probs=158.2
Q ss_pred CCcceeecchhhhhHHHHHHHHhh----hcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcC
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALE----FNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFP 688 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le----~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~q 688 (964)
+..|+++|... +.+..++.+++ .+......+..|.+++|.++ .+.+..+.||++++......+
T Consensus 9 g~t~L~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~---------- 76 (241)
T 1k1a_A 9 GDTPLHIAVVQ--GNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALD---------- 76 (241)
T ss_dssp TCCHHHHHHHT--TCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC----------
T ss_pred CCcHHHHHHHc--CCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccC----------
Confidence 46788887755 56666666665 45544444567899999999 488888899998774322222
Q ss_pred ccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcc
Q 002122 689 LRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSE 768 (964)
Q Consensus 689 l~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~ 768 (964)
....++||+|+..++.++++.|++......++... .+..|.||||+|++.|+.+++++|+++ |+
T Consensus 77 -~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-----~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~--- 140 (241)
T 1k1a_A 77 -RHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEA-----RNYDGLTALHVAVNTECQETVQLLLER-------GA--- 140 (241)
T ss_dssp -TTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTC-----CCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC---
T ss_pred -CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccc-----cCcCCCcHHHHHHHcCCHHHHHHHHHc-------CC---
Confidence 23478999999999999999999976533222221 345688999999999999999999999 76
Q ss_pred ccccccccccccccCCCcCC-CCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHH
Q 002122 769 NKALVDGVHKGFLFRPDVIG-PAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYI 847 (964)
Q Consensus 769 ~~~lv~~a~~~y~fdpn~~d-~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv 847 (964)
+++..+ ..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++
T Consensus 141 --------------~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v 199 (241)
T 1k1a_A 141 --------------DIDAVDIKSGRSPLIHAVE-NNSLSMVQLLLQH------GANVNAQMYSGSSALHSASGRGLLPLV 199 (241)
T ss_dssp --------------CTTCCCTTTCCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCBCTTSCBHHHHHHHHTCHHHH
T ss_pred --------------CcccccccCCCcHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 778877 789999999999 9999999999999 999999999999999999999999999
Q ss_pred HHHHHhhhcC
Q 002122 848 HLVQKKINKR 857 (964)
Q Consensus 848 ~LL~~k~ak~ 857 (964)
++|.+++++.
T Consensus 200 ~~Ll~~ga~~ 209 (241)
T 1k1a_A 200 RTLVRSGADS 209 (241)
T ss_dssp HHHHHTTCCT
T ss_pred HHHHhcCCCC
Confidence 9999988764
|
| >1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-21 Score=200.91 Aligned_cols=189 Identities=17% Similarity=0.128 Sum_probs=158.1
Q ss_pred CCCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhccccc-ccccCCCCCCCCCcCcc
Q 002122 613 STFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQS-KSRLGHLDPNTDLFPLR 690 (964)
Q Consensus 613 s~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~-~~~~~~~d~~l~l~ql~ 690 (964)
.+..|+++|... +.+..++.+++.++.....+..|.+++|.++ .+.+..+.+|+++... ... ...
T Consensus 56 ~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-----------~~~ 122 (253)
T 1yyh_A 56 TGETALHLAARY--SRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDA-----------RMH 122 (253)
T ss_dssp TSCCHHHHHHHT--TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTC-----------CCT
T ss_pred CCCcHHHHHHHc--CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc-----------cCC
Confidence 347899887754 6778889999988876656678899999999 5788888888887631 111 112
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
...++||+|+..++.++++.||+.+++.+ ..+..|.||||+|++.|+.++|++||++ |+
T Consensus 123 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-------ga----- 181 (253)
T 1yyh_A 123 DGTTPLILAARLAVEGMLEDLINSHADVN---------AVDDLGKSALHWAAAVNNVDAAVVLLKN-------GA----- 181 (253)
T ss_dssp TCCCHHHHHHHHTCSSHHHHHHHTTCCTT---------CBCTTSCBHHHHHHHHTCHHHHHHHHHT-------TC-----
T ss_pred CCCcHHHHHHHcChHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----
Confidence 35789999999999999999999654321 1245689999999999999999999999 77
Q ss_pred ccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 002122 771 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 850 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL 850 (964)
++|.+|..|.||||+|+. .|+.+++++|+++ ||+++.+|..|.||||+|+.+||.+++++|
T Consensus 182 ------------~~~~~~~~g~tpL~~A~~-~~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l 242 (253)
T 1yyh_A 182 ------------NKDMQNNREETPLFLAAR-EGSYETAKVLLDH------FANRDITDHMDRLPRDIAQERMHHDIVRLL 242 (253)
T ss_dssp ------------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred ------------CCCCcCCCCCCHHHHHHH-CCCHHHHHHHHHc------CCCccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 889999999999999999 9999999999999 999999999999999999999999999999
Q ss_pred HHhh
Q 002122 851 QKKI 854 (964)
Q Consensus 851 ~~k~ 854 (964)
....
T Consensus 243 ~~~~ 246 (253)
T 1yyh_A 243 DLEH 246 (253)
T ss_dssp HC--
T ss_pred HHHh
Confidence 8654
|
| >3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.4e-21 Score=190.86 Aligned_cols=188 Identities=17% Similarity=0.118 Sum_probs=152.8
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcC-cchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 615 FFPFIVAEEDVCSEIRMLESALEFNR-TDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 615 ffP~LVad~~iCsEI~~LE~~le~~a-~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
..|++.|... +.+..++.++..+. .....+..|.+++|.++ .+.+..+.+|++++......+ ...
T Consensus 6 ~~~L~~A~~~--g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-----------~~g 72 (201)
T 3hra_A 6 VGALLEAANQ--RDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQN-----------SIS 72 (201)
T ss_dssp TTHHHHHHHT--TCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-----------TTS
T ss_pred ccHHHHHHHh--ccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC-----------CCC
Confidence 5566665544 77888888887766 33333567899999999 588889999998875322222 234
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccc-cCccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDR-LGSENKA 771 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dG-a~~~~~~ 771 (964)
.++||+|+..++.++++.|++... .+.. ..+..|.||||+|++.|+.++|++||+. | +
T Consensus 73 ~t~l~~A~~~~~~~~~~~Ll~~~~---~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~------ 131 (201)
T 3hra_A 73 DSPYLYAGAQGRTEILAYMLKHAT---PDLN-----KHNRYGGNALIPAAEKGHIDNVKLLLED-------GRE------ 131 (201)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSC---CCTT-----CCCTTSCCSHHHHHHTTCHHHHHHHHHH-------CCC------
T ss_pred CCHHHHHHHcCCHHHHHHHHhccC---cccc-----cccCCCCcHHHHHHHcCCHHHHHHHHHc-------CCC------
Confidence 789999999999999999996321 1111 1345688999999999999999999999 5 4
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCC-----HHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS-----EDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSY 846 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~-----~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~sv 846 (964)
++|..|..|.||||+|+. .+. .+++++|+++ |++++.+|..|.||||+|+.+|+.++
T Consensus 132 -----------~~~~~~~~g~t~L~~A~~-~~~~~~~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~ 193 (201)
T 3hra_A 132 -----------DIDFQNDFGYTALIEAVG-LREGNQLYQDIVKLLMEN------GADQSIKDNSGRTAMDYANQKGYTEI 193 (201)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-SSCCSHHHHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred -----------CcCCCCCCCCCHHHHHHH-hccchhhHHHHHHHHHHC------CCCCCccCCCCCCHHHHHHHcCCHhH
Confidence 789999999999999999 777 9999999999 99999999999999999999999999
Q ss_pred HHHHHHhh
Q 002122 847 IHLVQKKI 854 (964)
Q Consensus 847 v~LL~~k~ 854 (964)
+++|.+++
T Consensus 194 ~~~Ll~~G 201 (201)
T 3hra_A 194 SKILAQYN 201 (201)
T ss_dssp HHHHHTCC
T ss_pred HHHHHhcC
Confidence 99998753
|
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.5e-21 Score=193.04 Aligned_cols=193 Identities=14% Similarity=0.078 Sum_probs=161.5
Q ss_pred CCCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccc
Q 002122 613 STFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRR 691 (964)
Q Consensus 613 s~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R 691 (964)
++..|+++|... +.+..++.+++.+......+..|.+++|.++ -+.+..+.||++++......+ ..
T Consensus 10 ~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-----------~~ 76 (237)
T 3b7b_A 10 NKRSPLHAAAEA--GHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKD-----------AE 76 (237)
T ss_dssp CSCCHHHHHHHH--TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCC-----------TT
T ss_pred CCCCHHHHHHHc--CcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCC-----------CC
Confidence 347788887654 7788889999988876655678899999999 488888899998775322221 23
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++||+|+..|+.+++++|++... .+. ...+..|.||||+|++.++.+++++|+++ |+
T Consensus 77 g~t~L~~A~~~~~~~~~~~Ll~~~~---~~~-----~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~------ 135 (237)
T 3b7b_A 77 GSTCLHLAAKKGHYEVVQYLLSNGQ---MDV-----NCQDDGGWTPMIWATEYKHVDLVKLLLSK-------GS------ 135 (237)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTTC---CCT-----TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCC---CCc-----ccCCCCCCCHHHHHHHcCCHHHHHHHHHC-------CC------
Confidence 4689999999999999999998541 111 11345688999999999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
+++..+..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.
T Consensus 136 -----------~~~~~~~~g~t~L~~A~~-~~~~~~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 197 (237)
T 3b7b_A 136 -----------DINIRDNEENICLHWAAF-SGCVDIAEILLAA------KCDLHAVNIHGDSPLHIAARENRYDCVVLFL 197 (237)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-HCCHHHHHHHHTT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCccCCCCCCHHHHHHH-CCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHhCCHhHHHHHH
Confidence 789999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcC
Q 002122 852 KKINKR 857 (964)
Q Consensus 852 ~k~ak~ 857 (964)
+++++.
T Consensus 198 ~~gad~ 203 (237)
T 3b7b_A 198 SRDSDV 203 (237)
T ss_dssp TTTCCT
T ss_pred HcCCCC
Confidence 988764
|
| >3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.2e-21 Score=195.27 Aligned_cols=190 Identities=15% Similarity=0.080 Sum_probs=123.9
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcCcch-hhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 615 FFPFIVAEEDVCSEIRMLESALEFNRTDA-DVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 615 ffP~LVad~~iCsEI~~LE~~le~~a~~~-~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
-.|++.|.. .+.+..++.+++...... ..+..|.+++|.++ .+.+..+.||++++......+ ...
T Consensus 7 ~~~l~~A~~--~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g 73 (231)
T 3aji_A 7 NIMICNLAY--SGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKD-----------DAG 73 (231)
T ss_dssp SSHHHHHHH--HTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC-----------TTS
T ss_pred cchHHHHHH--hCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcC-----------CCC
Confidence 445444433 366666766666544322 22456677777777 466667777777654322221 123
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++||+|+..++.++++.|++..++.+. .+..|.||||+|++.++.+++++|++. |+
T Consensus 74 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~------- 130 (231)
T 3aji_A 74 WSPLHIAASAGXDEIVKALLVKGAHVNA---------VNQNGCTPLHYAASKNRHEIAVMLLEG-------GA------- 130 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC---------CCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred CCHHHHHHHcCHHHHHHHHHHcCCCCCC---------CCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-------
Confidence 5677777777777777777775433111 233466777777777777777777777 55
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
+++..+..|.||||+|+. .|+.+++++|+++ +++++.+|..|.||||+|+..|+.+++++|.+
T Consensus 131 ----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 193 (231)
T 3aji_A 131 ----------NPDAKDHYDATAMHRAAA-KGNLKMVHILLFY------KASTNIQDTEGNTPLHLACDEERVEEAKFLVT 193 (231)
T ss_dssp ----------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHT------TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ----------CCCCcCCCCCcHHHHHHH-cCCHHHHHHHHhc------CCCccccCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 666777777777777777 7777777777777 77777777777777777777777777777777
Q ss_pred hhhcC
Q 002122 853 KINKR 857 (964)
Q Consensus 853 k~ak~ 857 (964)
++++.
T Consensus 194 ~ga~~ 198 (231)
T 3aji_A 194 QGASI 198 (231)
T ss_dssp TTCCS
T ss_pred CCCCC
Confidence 76653
|
| >1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-21 Score=200.51 Aligned_cols=195 Identities=14% Similarity=0.098 Sum_probs=139.6
Q ss_pred CCcceeecchhh-----------hhHHHHHHHHhhhcCcchhh-hhcCccccHHHH-HHHHHHHhhhhcccccccccCCC
Q 002122 614 TFFPFIVAEEDV-----------CSEIRMLESALEFNRTDADV-ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHL 680 (964)
Q Consensus 614 ~ffP~LVad~~i-----------CsEI~~LE~~le~~a~~~~~-~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~ 680 (964)
+..|+++|...- -..+..++.+++.+...... +..|.+++|.+| .+.+..+.+|++++......+
T Consensus 10 g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-- 87 (253)
T 1yyh_A 10 GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQD-- 87 (253)
T ss_dssp ------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC--
T ss_pred CCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC--
Confidence 477777765421 23677788888877765433 567899999999 588888999998874322221
Q ss_pred CCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCc
Q 002122 681 DPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLE 760 (964)
Q Consensus 681 d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~ 760 (964)
....++||+|+..++.+++++|++.... + ....+..|.||||+|++.|+.++|++||++
T Consensus 88 ---------~~g~t~L~~A~~~~~~~~v~~Ll~~~~~---~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---- 146 (253)
T 1yyh_A 88 ---------NMGRTPLHAAVSADAQGVFQILIRNRAT---D-----LDARMHDGTTPLILAARLAVEGMLEDLINS---- 146 (253)
T ss_dssp ---------TTSCCHHHHHHHHTCHHHHHHHHHSTTS---C-----TTCCCTTCCCHHHHHHHHTCSSHHHHHHHT----
T ss_pred ---------CCCCCHHHHHHHcCCHHHHHHHHHcCCC---C-----ccccCCCCCcHHHHHHHcChHHHHHHHHHc----
Confidence 2357899999999999999999985421 1 111345688999999999999999999999
Q ss_pred cccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHH
Q 002122 761 VSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARL 840 (964)
Q Consensus 761 ~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~ 840 (964)
|+ ++|..|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+.
T Consensus 147 ---g~-----------------~~~~~d~~g~t~L~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~tpL~~A~~ 199 (253)
T 1yyh_A 147 ---HA-----------------DVNAVDDLGKSALHWAAA-VNNVDAAVVLLKN------GANKDMQNNREETPLFLAAR 199 (253)
T ss_dssp ---TC-----------------CTTCBCTTSCBHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHH
T ss_pred ---CC-----------------CCCCcCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHH
Confidence 77 889999999999999999 9999999999999 99999999999999999999
Q ss_pred cCCHHHHHHHHHhhhcCC
Q 002122 841 RGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 841 rGh~svv~LL~~k~ak~~ 858 (964)
.|+.+++++|.+++++..
T Consensus 200 ~~~~~~v~~Ll~~ga~~~ 217 (253)
T 1yyh_A 200 EGSYETAKVLLDHFANRD 217 (253)
T ss_dssp HTCHHHHHHHHHTTCCTT
T ss_pred CCCHHHHHHHHHcCCCcc
Confidence 999999999999987643
|
| >3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A | Back alignment and structure |
|---|
Probab=99.86 E-value=8.4e-21 Score=190.99 Aligned_cols=191 Identities=14% Similarity=0.106 Sum_probs=160.2
Q ss_pred CCCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccc
Q 002122 613 STFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRR 691 (964)
Q Consensus 613 s~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R 691 (964)
.+..|+++|... +.+..++.+++.+......+..|.+++|.++ .+.+..+.||++++......+ ..
T Consensus 39 ~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-----------~~ 105 (231)
T 3aji_A 39 DSRTALHWACSA--GHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVN-----------QN 105 (231)
T ss_dssp TSCCHHHHHHHH--TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-----------TT
T ss_pred CCCCHHHHHHHc--CcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCC-----------CC
Confidence 347788887654 6788888999888766655677899999998 577888889988774322221 23
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++||+|+..++.+++++|++...+.+ ..+..|.||||+|+..|+.++|++|+++ |+
T Consensus 106 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 163 (231)
T 3aji_A 106 GCTPLHYAASKNRHEIAVMLLEGGANPD---------AKDHYDATAMHRAAAKGNLKMVHILLFY-------KA------ 163 (231)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC---------CcCCCCCcHHHHHHHcCCHHHHHHHHhc-------CC------
Confidence 4789999999999999999998654321 1244588999999999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
++|.+|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..++.+++++|.
T Consensus 164 -----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~ 225 (231)
T 3aji_A 164 -----------STNIQDTEGNTPLHLACD-EERVEEAKFLVTQ------GASIYIENKEEKTPLQVAKGGLGLILKRLAE 225 (231)
T ss_dssp -----------CSCCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCSCCCCTTSCCHHHHSCHHHHHHHHHHHH
T ss_pred -----------CccccCCCCCCHHHHHHH-CCCHHHHHHHHHC------CCCCCCCCCCCCCHHHHHHhhHHHHHHHHHc
Confidence 889999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred Hhhhc
Q 002122 852 KKINK 856 (964)
Q Consensus 852 ~k~ak 856 (964)
++++.
T Consensus 226 ~~~a~ 230 (231)
T 3aji_A 226 GEEAS 230 (231)
T ss_dssp HHHHC
T ss_pred ccccc
Confidence 98764
|
| >3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A | Back alignment and structure |
|---|
Probab=99.85 E-value=6.6e-21 Score=183.61 Aligned_cols=159 Identities=18% Similarity=0.102 Sum_probs=135.7
Q ss_pred CccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCc
Q 002122 649 GKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS 727 (964)
Q Consensus 649 g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~ 727 (964)
|.+++|.+| .+.+..+.++++.+......+ ....++||+|+..|+.++++.|++..++.+.
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~-----------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------- 64 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVINHTD-----------EEGFTPLMWAAAHGQIAVVEFLLQNGADPQL------- 64 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCTTCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCcCCCC-----------CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-------
Confidence 567888888 578888888888764322222 2347899999999999999999996543211
Q ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHH
Q 002122 728 LDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDV 807 (964)
Q Consensus 728 le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dV 807 (964)
.+..|.||||+|+..|+.++|++|+++ |+ ++|..|..|.||||+|+. .|+.++
T Consensus 65 --~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~ 117 (167)
T 3v31_A 65 --LGKGRESALSLACSKGYTDIVKMLLDC-------GV-----------------DVNEYDWNGGTPLLYAVH-GNHVKC 117 (167)
T ss_dssp --CCTTCCCHHHHHHHHTCHHHHHHHHHH-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHH
T ss_pred --cCCCCCcHHHHHHHcCCHHHHHHHHHC-------CC-----------------CCCcCCCCCCCHHHHHHH-cCCHHH
Confidence 245688999999999999999999999 77 889999999999999999 999999
Q ss_pred HHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 808 LDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 808 V~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
+++|+++ |++++.+|..|.||||+|+..|+.+++++|.+++.+..
T Consensus 118 v~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 118 VKMLLES------GADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp HHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHc------CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 9999999 99999999999999999999999999999999987654
|
| >3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A | Back alignment and structure |
|---|
Probab=99.85 E-value=9.5e-21 Score=183.36 Aligned_cols=158 Identities=19% Similarity=0.130 Sum_probs=134.7
Q ss_pred ccccHHHH-HHHHHHHhhhhccccc-ccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCc
Q 002122 650 KIDTKNQA-MDFIHEIGWLFHRSQS-KSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS 727 (964)
Q Consensus 650 ~~~~h~~a-l~fL~EIGWLLqr~~~-~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~ 727 (964)
.+++|.+| .+.+..+.+++..... ....+ ....++||+|+..|+.++|++||+.+++.+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-----------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------- 64 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPD-----------ERGFTPLIWASAFGEIETVRFLLEWGADPHI------- 64 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-------
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCC-----------CCCCCHHHHHHHcCCHHHHHHHHHcCCCchh-------
Confidence 46788888 5888888888887642 11111 2357899999999999999999997553221
Q ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHH
Q 002122 728 LDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDV 807 (964)
Q Consensus 728 le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dV 807 (964)
.+..|.||||+|+..|+.++|++|+++ |+ ++|..|..|.||||+|+. .|+.++
T Consensus 65 --~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~ 117 (172)
T 3v30_A 65 --LAKERESALSLASTGGYTDIVGLLLER-------DV-----------------DINIYDWNGGTPLLYAVR-GNHVKC 117 (172)
T ss_dssp --CCTTCCCHHHHHHHTTCHHHHHHHHTT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHH
T ss_pred --hcccCCCHHHHHHHCCCHHHHHHHHHc-------CC-----------------CCCCCCCCCCCHHHHHHH-cCCHHH
Confidence 244688999999999999999999999 77 889999999999999999 999999
Q ss_pred HHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 808 LDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 808 V~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
+++|+++ |++++.+|..|.||||+|+..|+.+++++|.+++++..
T Consensus 118 v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (172)
T 3v30_A 118 VEALLAR------GADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLF 162 (172)
T ss_dssp HHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHc------CCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 9999999 99999999999999999999999999999999988754
|
| >3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-20 Score=198.74 Aligned_cols=200 Identities=20% Similarity=0.189 Sum_probs=164.8
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
+..|+++|... +.+..++.+++.++.....+..|.+++|.++ .+.+..+.||++++......+ ...
T Consensus 58 g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-----------~~g 124 (351)
T 3utm_A 58 KSTPLHLAAGY--NRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMD-----------LWQ 124 (351)
T ss_dssp CCCHHHHHHHT--TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTC
T ss_pred CCCHHHHHHHc--CCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCC-----------CCC
Confidence 47899988765 7788899999998877666678999999999 488889999998874322222 234
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCccc-CCCCC--------------------------------------------c
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVS-LGEHP--------------------------------------------S 727 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd-~g~~~--------------------------------------------~ 727 (964)
.++||+|+..|+.+++++||+.+++.... ..... .
T Consensus 125 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 204 (351)
T 3utm_A 125 FTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIIN 204 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhccc
Confidence 68999999999999999999987654321 10000 0
Q ss_pred hhhccCCCcHHHHHHHc---CCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCC
Q 002122 728 LDLALTELGLLHRAVRK---NSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS 804 (964)
Q Consensus 728 le~~l~G~TpLH~AVr~---g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~ 804 (964)
...+..|.||||+|+.. +..+++++|++. |+ ++|.++..|.||||+|+. .|+
T Consensus 205 ~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~g~ 259 (351)
T 3utm_A 205 FKQPQSHETALHCAVASLHPKRKQVAELLLRK-------GA-----------------NVNEKNKDFMTPLHVAAE-RAH 259 (351)
T ss_dssp CCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHT-------TC-----------------CTTCCCTTCCCHHHHHHH-TTC
T ss_pred ccCCCCCCCHHHHHHHHhCccHHHHHHHHHHc-------CC-----------------CcCCcCCCCCCHHHHHHH-cCC
Confidence 01234578999999999 568999999999 77 889999999999999999 999
Q ss_pred HHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 805 EDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 805 ~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
.++|++|+++ |+++|.+|..|.||||+|+.+||.+++++|.+++++.
T Consensus 260 ~~~v~~Ll~~------ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~ 306 (351)
T 3utm_A 260 NDVMEVLHKH------GAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDP 306 (351)
T ss_dssp HHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHHC------CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC
Confidence 9999999999 9999999999999999999999999999999998764
|
| >1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E | Back alignment and structure |
|---|
Probab=99.85 E-value=1e-21 Score=199.60 Aligned_cols=197 Identities=13% Similarity=-0.009 Sum_probs=151.9
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcC----cchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcC
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNR----TDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFP 688 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a----~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~q 688 (964)
+..|+++|... +.+..++.+++.+. .....+..|.+++|.++ .+.+..+.+|++++......+
T Consensus 8 g~t~L~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~---------- 75 (236)
T 1ikn_D 8 GDSFLHLAIIH--EEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRD---------- 75 (236)
T ss_dssp CCCTTHHHHHT--TCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCC----------
T ss_pred CCchhHHHHHc--CChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC----------
Confidence 35666666533 33334444444333 22223456899999999 588888999998874322222
Q ss_pred ccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcc
Q 002122 689 LRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSE 768 (964)
Q Consensus 689 l~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~ 768 (964)
....++||+|+..|+.++++.|++...+.... . .....+..|.||||+|+..|+.++|++||++ |+
T Consensus 76 -~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~--- 141 (236)
T 1ikn_D 76 -FRGNTPLHLACEQGCLASVGVLTQSCTTPHLH--S-ILKATNYNGHTCLHLASIHGYLGIVELLVSL-------GA--- 141 (236)
T ss_dssp -TTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSS--C-GGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH-------TC---
T ss_pred -CCCCCHHHHHHHcCCHHHHHHHHhcccchhHH--H-HhhccCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC---
Confidence 23578999999999999999999965432110 0 0111345689999999999999999999999 77
Q ss_pred ccccccccccccccCCCcCCC-CCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHH
Q 002122 769 NKALVDGVHKGFLFRPDVIGP-AGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYI 847 (964)
Q Consensus 769 ~~~lv~~a~~~y~fdpn~~d~-~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv 847 (964)
++|..+. .|.||||+|+. .|+.++|++|+++ ||+++.+|..|.||||+|+.+|+.+++
T Consensus 142 --------------~~~~~~~~~g~tpL~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~~ 200 (236)
T 1ikn_D 142 --------------DVNAQEPCNGRTALHLAVD-LQNPDLVSLLLKC------GADVNRVTYQGYSPYQLTWGRPSTRIQ 200 (236)
T ss_dssp --------------CTTCCCTTTCCCHHHHHHH-TTCHHHHHHHHTT------TCCSCCCCTTCCCGGGGCTTSSCHHHH
T ss_pred --------------CCCCCCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCcccCCCCCHHHHHHccCchHHH
Confidence 8888887 99999999999 9999999999999 999999999999999999999999999
Q ss_pred HHHHHhhhcC
Q 002122 848 HLVQKKINKR 857 (964)
Q Consensus 848 ~LL~~k~ak~ 857 (964)
++|.+++++.
T Consensus 201 ~~Ll~~ga~~ 210 (236)
T 1ikn_D 201 QQLGQLTLEN 210 (236)
T ss_dssp HHHHTTSCGG
T ss_pred HHHHHcchhh
Confidence 9999998754
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.4e-21 Score=207.41 Aligned_cols=131 Identities=16% Similarity=0.097 Sum_probs=111.1
Q ss_pred ccchHHHHHHHcC--chHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcc
Q 002122 691 RFKWLIEFSMDHE--WCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSE 768 (964)
Q Consensus 691 R~k~lL~fAve~g--~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~ 768 (964)
...++||+|+..| +.++|++||+.+++.+. .+..|.||||+|+..|+.++|++||++ |+.
T Consensus 137 ~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~---------~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------g~~-- 198 (364)
T 3ljn_A 137 KGQTALHWCVGLGPEYLEMIKILVQLGASPTA---------KDKADETPLMRAMEFRNREALDLMMDT-------VPS-- 198 (364)
T ss_dssp SCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTC---------CCTTSCCHHHHHHHTTCHHHHHHHHHH-------CSC--
T ss_pred CCCCHHHHHHHcCCchHHHHHHHHHcCCCCcc---------cCCCCCCHHHHHHHcCCHHHHHHHHhc-------ccc--
Confidence 3567899999988 88999999886543221 245688999999999999999999998 551
Q ss_pred ccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHH
Q 002122 769 NKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIH 848 (964)
Q Consensus 769 ~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~ 848 (964)
....++|..|..|.||||+||. .|+.++|++|+++ ||++|.+|..|.||||+|+..||.++++
T Consensus 199 ----------~~~~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~------gad~~~~d~~g~tpL~~A~~~g~~~~v~ 261 (364)
T 3ljn_A 199 ----------KSSLRLDYANKQGNSHLHWAIL-INWEDVAMRFVEM------GIDVNMEDNEHTVPLYLSVRAAMVLLTK 261 (364)
T ss_dssp ----------SSSCCTTCCCTTCCCTTHHHHT-TTCHHHHHHHHTT------TCCTTCCCTTSCCHHHHHHHTCCHHHHH
T ss_pred ----------cccccccccCCCCCcHHHHHHH-cCCHHHHHHHHHc------CCCCCCCCCCCCCHHHHHHHhChHHHHH
Confidence 0111488999999999999999 9999999999999 9999999999999999999999999999
Q ss_pred HHHHhhhc
Q 002122 849 LVQKKINK 856 (964)
Q Consensus 849 LL~~k~ak 856 (964)
+|.+++++
T Consensus 262 ~Ll~~~~~ 269 (364)
T 3ljn_A 262 ELLQKTDV 269 (364)
T ss_dssp HHHHHSCH
T ss_pred HHHHcCCc
Confidence 99998754
|
| >4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=7.3e-21 Score=201.19 Aligned_cols=202 Identities=16% Similarity=0.110 Sum_probs=140.6
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcCcch--------hhhhcCccccHHHH-HHHH-HHHhhhhcccccccccCCCCCCC
Q 002122 615 FFPFIVAEEDVCSEIRMLESALEFNRTDA--------DVERFGKIDTKNQA-MDFI-HEIGWLFHRSQSKSRLGHLDPNT 684 (964)
Q Consensus 615 ffP~LVad~~iCsEI~~LE~~le~~a~~~--------~~~e~g~~~~h~~a-l~fL-~EIGWLLqr~~~~~~~~~~d~~l 684 (964)
..|++.|... +.+..++.+++.++.+. ..+..+.++++.++ .+.. ..+..|+..+......+
T Consensus 12 ~~~L~~A~~~--G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d------ 83 (269)
T 4b93_B 12 VEKLLRAVAD--GDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTS------ 83 (269)
T ss_dssp HHHHHHHHHT--TCHHHHHHHHTCC----------------------------------------CCCCTTCCC------
T ss_pred hhHHHHHHHc--CCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcC------
Confidence 3455655443 77888888888776432 11234667777776 3333 34566666664322221
Q ss_pred CCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccc
Q 002122 685 DLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDR 764 (964)
Q Consensus 685 ~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dG 764 (964)
....+|||+|+..|+.++|++||+..++.. ..+..|.||||.|+..++.+++++||++ |
T Consensus 84 -----~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~---------~~~~~g~t~l~~a~~~~~~~~~~~Ll~~-------g 142 (269)
T 4b93_B 84 -----QDGSSPLHVAALHGRADLIPLLLKHGANAG---------ARNADQAVPLHLACQQGHFQVVKCLLDS-------N 142 (269)
T ss_dssp -----TTSCCHHHHHHHTTCTTHHHHHHHTTCCTT---------CCCTTCCCHHHHHHHHTCHHHHHHHHHT-------T
T ss_pred -----CCCCCHHHHHHHcCcHHHHHHHHhcCCCcC---------ccCCCCCCccccccccChHHHHHHHHHC-------C
Confidence 235789999999999999999999654321 1345688999999999999999999999 7
Q ss_pred cCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCH
Q 002122 765 LGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHY 844 (964)
Q Consensus 765 a~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~ 844 (964)
+ ++|.+|..|+||||+||. .|+.++|++|+++ ||++|.+|..|.||||+|+.+||.
T Consensus 143 ~-----------------~~n~~d~~g~TpL~~A~~-~g~~~~v~~Ll~~------gadvn~~~~~g~t~Lh~A~~~g~~ 198 (269)
T 4b93_B 143 A-----------------KPNKKDLSGNTPLIYACS-GGHHELVALLLQH------GASINASNNKGNTALHEAVIEKHV 198 (269)
T ss_dssp C-----------------CSCCCCTTCCCHHHHHHH-TTCGGGHHHHHHT------TCCTTCBCTTSCBHHHHHHHTTCH
T ss_pred C-----------------CCCCCCCCCCCHHHHHHH-CCCHHHHHHHHHC------CCCCCccccCCCcHHHHHHHcCCH
Confidence 7 899999999999999999 9999999999999 999999999999999999999999
Q ss_pred HHHHHHHHhhhcCC---CCCCceeecCC
Q 002122 845 SYIHLVQKKINKRP---NGGHVVVDICG 869 (964)
Q Consensus 845 svv~LL~~k~ak~~---~~~~v~v~ip~ 869 (964)
+++++|.+++++.. ..+.+.++++.
T Consensus 199 ~~v~~Ll~~Gad~~~~d~~G~TpL~~A~ 226 (269)
T 4b93_B 199 FVVELLLLHGASVQVLNKRQRTAVDCAE 226 (269)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCSGGGSC
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 99999999987643 24556666653
|
| >1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A | Back alignment and structure |
|---|
Probab=99.84 E-value=8.5e-21 Score=181.17 Aligned_cols=155 Identities=19% Similarity=0.192 Sum_probs=129.8
Q ss_pred ccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCch
Q 002122 650 KIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSL 728 (964)
Q Consensus 650 ~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~l 728 (964)
.++++.++ .+.+..+.+|++++......+ ....++||+|+. ++.+++++|++..++.+
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-----------~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~--------- 64 (162)
T 1ihb_A 6 GNELASAAARGDLEQLTSLLQNNVNVNAQN-----------GFGRTALQVMKL-GNPEIARRLLLRGANPD--------- 64 (162)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTSCCCTTCCC-----------TTSCCHHHHCCS-SCHHHHHHHHHTTCCTT---------
T ss_pred hhHHHHHHHcCCHHHHHHHHhCCCCccccC-----------ccCccHHHHHHc-CcHHHHHHHHHcCCCCC---------
Confidence 45677777 588888889987764222211 235789999999 99999999999654321
Q ss_pred hhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHH
Q 002122 729 DLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVL 808 (964)
Q Consensus 729 e~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV 808 (964)
..+..|.||||+|++.|+.++|++|+++ |+ ++|.+|..|.||||+|+. .|+.+++
T Consensus 65 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~v 119 (162)
T 1ihb_A 65 LKDRTGFAVIHDAARAGFLDTLQTLLEF-------QA-----------------DVNIEDNEGNLPLHLAAK-EGHLRVV 119 (162)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCCcCCCCCCHHHHHHH-cCCHHHH
Confidence 1245688999999999999999999999 77 889999999999999999 9999999
Q ss_pred HHhhcCCCCCccccc-cccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhc
Q 002122 809 DALTDDPGMVGIEAW-KNARDSSGSTPEDYARLRGHYSYIHLVQKKINK 856 (964)
Q Consensus 809 ~lLL~~p~~vg~gAd-inarD~~G~TPLh~A~~rGh~svv~LL~~k~ak 856 (964)
++|+++ +++ ++.+|..|.||||+|+.+|+.+++++|.+++++
T Consensus 120 ~~Ll~~------g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 120 EFLVKH------TASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHH------SCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHHc------cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 999999 887 699999999999999999999999999998864
|
| >2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.84 E-value=9.2e-21 Score=187.01 Aligned_cols=158 Identities=16% Similarity=0.139 Sum_probs=134.7
Q ss_pred hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC
Q 002122 646 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE 724 (964)
Q Consensus 646 ~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~ 724 (964)
+..|.+++|.+| .+.+..+.+|++++......+ ....++||+|+..++.+++++|++..++.+
T Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-----------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----- 95 (192)
T 2rfm_A 32 DSYNRTPLMVACMLGMENAIDKLVENFDKLEDKD-----------IEGSTALIWAVKNNRLGIAEKLLSKGSNVN----- 95 (192)
T ss_dssp CTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHHTCCTT-----
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhcccccccc-----------ccCccHHHHHHHcCCHHHHHHHHHCCCCCC-----
Confidence 346889999998 477777888887764221111 235789999999999999999999754321
Q ss_pred CCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCC
Q 002122 725 HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS 804 (964)
Q Consensus 725 ~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~ 804 (964)
..+..|.||||+|+..|+.++|++|+++ |+ ++|..|..|.||||+|+. .|+
T Consensus 96 ----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~ 146 (192)
T 2rfm_A 96 ----TKDFSGKTPLMWSIIFGYSEMSYFLLEH-------GA-----------------NVNDRNLEGETPLIVASK-YGR 146 (192)
T ss_dssp ----CCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CSSCCCTTCCCHHHHHHH-HTC
T ss_pred ----CCCCCCCcHHHHHHHcCCHHHHHHHHHC-------CC-----------------CCCCCCCCCCCHHHHHHH-cCC
Confidence 1245688999999999999999999999 77 889999999999999999 999
Q ss_pred HHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 002122 805 EDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKI 854 (964)
Q Consensus 805 ~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ 854 (964)
.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.+.+
T Consensus 147 ~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 147 SEIVKKLLEL------GADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHHHT------TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHC------CCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999 9999999999999999999999999999998875
|
| >2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A | Back alignment and structure |
|---|
Probab=99.84 E-value=3.2e-21 Score=198.22 Aligned_cols=209 Identities=14% Similarity=0.020 Sum_probs=149.8
Q ss_pred cceeecchhhhhHHH----HHHHHhhhcCcchh----hhhcCccccHHHHH----HHHHHHhhhhcccccccccCC-CCC
Q 002122 616 FPFIVAEEDVCSEIR----MLESALEFNRTDAD----VERFGKIDTKNQAM----DFIHEIGWLFHRSQSKSRLGH-LDP 682 (964)
Q Consensus 616 fP~LVad~~iCsEI~----~LE~~le~~a~~~~----~~e~g~~~~h~~al----~fL~EIGWLLqr~~~~~~~~~-~d~ 682 (964)
.|++.|... +.+. .|+.+++.+..... .+..|.+++|.+|. +.+..+.+|++++........ .+.
T Consensus 4 t~L~~A~~~--g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 4 DRLFSVVSR--GVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp HHHHHHHHH--TCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred cHHHHHHHc--CCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 455555533 3332 45666666765544 45678999999984 566666666665532111110 000
Q ss_pred CCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC-C---CchhhccCCCcHHHHHHHcCCHHHHHHHhc---
Q 002122 683 NTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE-H---PSLDLALTELGLLHRAVRKNSRPLVDLLLR--- 755 (964)
Q Consensus 683 ~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~-~---~~le~~l~G~TpLH~AVr~g~~e~VelLL~--- 755 (964)
.. ........++||+|+..|+.++|++||+.+++.+..... . .....+..|.||||+|++.|+.++|++||+
T Consensus 82 ~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 160 (256)
T 2etb_A 82 QC-TDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH 160 (256)
T ss_dssp CC-CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred cc-ccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 00 001124678999999999999999999976543321000 0 000001238899999999999999999999
Q ss_pred cCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhh-CCCHH-------HHHHhhcCCCCCcccccc---
Q 002122 756 FVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGK-DGSED-------VLDALTDDPGMVGIEAWK--- 824 (964)
Q Consensus 756 ~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~-~G~~d-------VV~lLL~~p~~vg~gAdi--- 824 (964)
+ |+ ++|.+|..|+||||+|+.. .++.+ ++++|+++ ||++
T Consensus 161 ~-------ga-----------------~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~------ga~~~~~ 210 (256)
T 2etb_A 161 Q-------PA-----------------SLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQM------GARLCPT 210 (256)
T ss_dssp C-------CC-----------------CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH------HHHHSTT
T ss_pred c-------CC-----------------CcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHc------CCCcccc
Confidence 6 77 8999999999999999973 57777 99999999 9999
Q ss_pred ----ccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 825 ----NARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 825 ----narD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
+.+|..|.||||+|+..||.+++++|.+++.+.
T Consensus 211 ~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 211 VQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp CCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 999999999999999999999999999998753
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.8e-20 Score=198.01 Aligned_cols=202 Identities=12% Similarity=0.015 Sum_probs=165.6
Q ss_pred CCCCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcc
Q 002122 612 SSTFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLR 690 (964)
Q Consensus 612 ss~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~ 690 (964)
.++..|+++|... +.+..++.+++.+......+..|.+++|.+| .+.+..+.||++++......+ .
T Consensus 57 ~~g~t~L~~Aa~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~-----------~ 123 (285)
T 3d9h_A 57 VSDWSPMHEAAIH--GHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVT-----------A 123 (285)
T ss_dssp CCSCCHHHHHHHT--TCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCC-----------T
T ss_pred ccCCCHHHHHHHc--CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCC-----------C
Confidence 3457899887755 7788899999988766555678999999999 488888899998874322222 2
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
...++||+|+..|+.++|+.|++..++.. ....|.||||+|++.|+.++|++|+++ |+
T Consensus 124 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~~g~t~L~~A~~~g~~~~v~~Ll~~-------g~----- 181 (285)
T 3d9h_A 124 DWHTPLFNACVSGSWDCVNLLLQHGASVQ----------PESDLASPIHEAARRGHVECVNSLIAY-------GG----- 181 (285)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCSS----------CSCTTSCHHHHHHHHTCHHHHHHHHHT-------TC-----
T ss_pred CCCCHHHHHHHcCHHHHHHHHHHCCCCCC----------CCCCCCCHHHHHHHcCCHHHHHHHHHC-------CC-----
Confidence 35789999999999999999999654321 123488999999999999999999999 77
Q ss_pred ccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 002122 771 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 850 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL 850 (964)
++|..|..|.||||+|+. .|+.++|++|+++ |++++. |..|.||||+|+..|+.+++++|
T Consensus 182 ------------~~~~~d~~g~t~L~~A~~-~~~~~~v~~Ll~~------ga~~~~-~~~g~t~L~~A~~~~~~~~v~~L 241 (285)
T 3d9h_A 182 ------------NIDHKISHLGTPLYLACE-NQQRACVKKLLES------GADVNQ-GKGQDSPLHAVVRTASEELACLL 241 (285)
T ss_dssp ------------CTTCCBTTTBCHHHHHHH-TTCHHHHHHHHHT------TCCTTC-CBTTBCHHHHHHHTTCHHHHHHH
T ss_pred ------------CCCCcCCCCCCHHHHHHH-cCcHHHHHHHHHC------CCCCCC-CCCCCCHHHHHHHcCCHHHHHHH
Confidence 789999999999999999 9999999999999 999995 99999999999999999999999
Q ss_pred HHhhhcCC---CCCCceeecC
Q 002122 851 QKKINKRP---NGGHVVVDIC 868 (964)
Q Consensus 851 ~~k~ak~~---~~~~v~v~ip 868 (964)
.+++++.. ..+.+.+++.
T Consensus 242 l~~gad~~~~d~~g~t~l~~A 262 (285)
T 3d9h_A 242 MDFGADTQAKNAEGKRPVELV 262 (285)
T ss_dssp HHTTCCTTCCCTTSCCGGGGS
T ss_pred HHCCCCCCCcCCCCCCHHHHh
Confidence 99987643 2334444443
|
| >3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.6e-21 Score=197.91 Aligned_cols=195 Identities=14% Similarity=0.041 Sum_probs=140.7
Q ss_pred HHHHhhhcCcchhhh----hcCccccHHHHH----HHHHHHhhhhcccccccccCC-CCCCCCCcCccccchHHHHHHHc
Q 002122 632 LESALEFNRTDADVE----RFGKIDTKNQAM----DFIHEIGWLFHRSQSKSRLGH-LDPNTDLFPLRRFKWLIEFSMDH 702 (964)
Q Consensus 632 LE~~le~~a~~~~~~----e~g~~~~h~~al----~fL~EIGWLLqr~~~~~~~~~-~d~~l~l~ql~R~k~lL~fAve~ 702 (964)
|+.+++.+......+ ..|.+++|.+++ +.+..+.+|++.+........ .+.... .......++||+|+..
T Consensus 25 l~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~-~~d~~g~t~L~~A~~~ 103 (260)
T 3jxi_A 25 LSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFR-DVYYRGQTALHIAIER 103 (260)
T ss_dssp HHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBC-CSSEESBCHHHHHHHT
T ss_pred HHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhccccc-ccccCCCCHHHHHHHc
Confidence 444444666544333 558999998873 555566666665421100000 000000 1112467899999999
Q ss_pred CchHHHHHHhhhhccCcccCC-C----CCchhhccCCCcHHHHHHHcCCHHHHHHHhc---cCCCccccccCcccccccc
Q 002122 703 EWCAVVKKLLHILLDGTVSLG-E----HPSLDLALTELGLLHRAVRKNSRPLVDLLLR---FVPLEVSDRLGSENKALVD 774 (964)
Q Consensus 703 g~~aVVk~LL~~l~d~~vd~g-~----~~~le~~l~G~TpLH~AVr~g~~e~VelLL~---~~p~~~~dGa~~~~~~lv~ 774 (964)
|+.++|++||+.+++.+.... . ......+..|.||||+|+..|+.++|++||+ + |+
T Consensus 104 g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~-------ga--------- 167 (260)
T 3jxi_A 104 RCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHK-------QA--------- 167 (260)
T ss_dssp TCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSC-------CC---------
T ss_pred CCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc-------CC---------
Confidence 999999999997654332100 0 0000011458999999999999999999999 6 77
Q ss_pred ccccccccCCCcCCCCCChHHHHHHhhCCC---------HHHHHHhhcCCCCCcccccc-------ccCCCCCCCHHHHH
Q 002122 775 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGS---------EDVLDALTDDPGMVGIEAWK-------NARDSSGSTPEDYA 838 (964)
Q Consensus 775 ~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~---------~dVV~lLL~~p~~vg~gAdi-------narD~~G~TPLh~A 838 (964)
++|.+|..|+||||+|+. .|+ .+++++|+++ ||++ +.+|..|.||||+|
T Consensus 168 --------~~~~~d~~g~TpLh~A~~-~~~~~~~~~~~~~~~v~~Ll~~------ga~~~~~~~~~~~~d~~g~tpL~~A 232 (260)
T 3jxi_A 168 --------DLRRQDSRGNTVLHALVA-IADNTRENTKFVTKMYDLLLIK------CAKLFPDTNLEALLNNDGLSPLMMA 232 (260)
T ss_dssp --------CTTCCCTTSCCHHHHHHH-HCCSSHHHHHHHHHHHHHHHHH------HHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred --------CCcccCCCCCcHHHHHHH-hccCchhHHHHHHHHHHHHHHh------CcccccccchhhcccCCCCCHHHHH
Confidence 899999999999999998 666 6999999999 9999 78999999999999
Q ss_pred HHcCCHHHHHHHHHhhhcCC
Q 002122 839 RLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 839 ~~rGh~svv~LL~~k~ak~~ 858 (964)
+..||.+++++|.+++.+..
T Consensus 233 ~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 233 AKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp HHTTCHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHhCCCcc
Confidence 99999999999999987643
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.84 E-value=3.6e-20 Score=189.52 Aligned_cols=202 Identities=17% Similarity=0.137 Sum_probs=160.7
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
+..|+++|... +.+..++.+++.++.....+..|.+++|.++ .+.+..+.||++++........... .........
T Consensus 72 g~t~L~~A~~~--~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~-~~~~~~~~g 148 (285)
T 1wdy_A 72 GATPFLLAAIA--GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKE-DQERLRKGG 148 (285)
T ss_dssp CCCHHHHHHHH--TCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCH-HHHHTTCCC
T ss_pred CCCHHHHHHHc--CCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHH-HHHhhccCC
Confidence 46788877654 6677888888888776655667889999998 4778888888887643222111000 000002235
Q ss_pred chHHHHHHHcCchHHHHHHhhh-hccCcccCCCCCchhhccCCCcHHHHHHHcCC----HHHHHHHhccCCCccccccCc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHI-LLDGTVSLGEHPSLDLALTELGLLHRAVRKNS----RPLVDLLLRFVPLEVSDRLGS 767 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~-l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~----~e~VelLL~~~p~~~~dGa~~ 767 (964)
.++||+|+..++.++++.|++. .++ .. ..+..|.||||+|+..++ .+++++|+++ |+
T Consensus 149 ~t~L~~A~~~~~~~~v~~Ll~~~~~~----~~-----~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~-------g~-- 210 (285)
T 1wdy_A 149 ATALMDAAEKGHVEVLKILLDEMGAD----VN-----ACDNMGRNALIHALLSSDDSDVEAITHLLLDH-------GA-- 210 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTSCCC----TT-----CCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT-------TC--
T ss_pred CcHHHHHHHcCCHHHHHHHHHhcCCC----CC-----ccCCCCCCHHHHHHHccccchHHHHHHHHHHc-------CC--
Confidence 6899999999999999999984 322 11 124568899999999999 9999999999 77
Q ss_pred cccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhc-CCCCCccccccccCCCCCCCHHHHHHHcCCHHH
Q 002122 768 ENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD-DPGMVGIEAWKNARDSSGSTPEDYARLRGHYSY 846 (964)
Q Consensus 768 ~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~-~p~~vg~gAdinarD~~G~TPLh~A~~rGh~sv 846 (964)
++|.++..|.||||+|+. .|+.+++++|++ . +++++.+|..|.||||+|+.+|+.++
T Consensus 211 ---------------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~~------g~~~~~~~~~g~t~l~~A~~~~~~~i 268 (285)
T 1wdy_A 211 ---------------DVNVRGERGKTPLILAVE-KKHLGLVQRLLEQE------HIEINDTDSDGKTALLLAVELKLKKI 268 (285)
T ss_dssp ---------------CSSCCCTTSCCHHHHHHH-TTCHHHHHHHHHSS------SCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred ---------------CCCCcCCCCCcHHHHHHH-cCCHHHHHHHHhcc------CCCccccCCCCCcHHHHHHHcCcHHH
Confidence 889999999999999999 999999999999 6 99999999999999999999999999
Q ss_pred HHHHHHhhhcCC
Q 002122 847 IHLVQKKINKRP 858 (964)
Q Consensus 847 v~LL~~k~ak~~ 858 (964)
+++|.+++++..
T Consensus 269 ~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 269 AELLCKRGASTD 280 (285)
T ss_dssp HHHHHHHSSCSC
T ss_pred HHHHHHcCCCCC
Confidence 999999998765
|
| >2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-20 Score=188.63 Aligned_cols=174 Identities=14% Similarity=0.083 Sum_probs=143.2
Q ss_pred HHhhhcCcchhh-hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHH
Q 002122 634 SALEFNRTDADV-ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKL 711 (964)
Q Consensus 634 ~~le~~a~~~~~-~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~L 711 (964)
.+++.+...... +..|.+++|.+| .+.+..+.||++++......+ ....++||+|+..++.++++.|
T Consensus 9 ~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g~t~L~~A~~~~~~~~v~~L 77 (223)
T 2f8y_A 9 DFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQD-----------NMGRTPLHAAVSADAQGVFQIL 77 (223)
T ss_dssp TTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcC-----------CCCCCHHHHHHHcCCHHHHHHH
Confidence 344445443322 467899999999 588888999998774322221 2357899999999999999999
Q ss_pred hhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCC
Q 002122 712 LHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAG 791 (964)
Q Consensus 712 L~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G 791 (964)
++.... + ....+..|.||||+|+..++.+++++|+++ |+ ++|..+..|
T Consensus 78 l~~~~~---~-----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~-----------------~~~~~~~~g 125 (223)
T 2f8y_A 78 IRNRAT---D-----LDARMHDGTTPLILAARLAVEGMLEDLINS-------HA-----------------DVNAVDDLG 125 (223)
T ss_dssp HHBTTS---C-----TTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCBCTTS
T ss_pred HHcCCC---C-----cccCCCCCCcHHHHHHHhCcHHHHHHHHHc-------CC-----------------CCcCcCCCC
Confidence 985321 1 111345688999999999999999999999 77 789999999
Q ss_pred ChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 792 LTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 792 ~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+.+|+.+++++|.+++++.
T Consensus 126 ~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 184 (223)
T 2f8y_A 126 KSALHWAAA-VNNVDAAVVLLKN------GANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR 184 (223)
T ss_dssp CBHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CcHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999 9999999999999 9999999999999999999999999999999998754
|
| >2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.4e-20 Score=180.07 Aligned_cols=155 Identities=19% Similarity=0.114 Sum_probs=130.0
Q ss_pred CccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCc
Q 002122 649 GKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS 727 (964)
Q Consensus 649 g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~ 727 (964)
+.+.++.+| .+.+..+.||+.++......+ ....++||+|+..|+.++++.|++..++.+
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------- 74 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANGADVNAED-----------ASGWTPLHLAAFNGHLEIVEVLLKNGADVN-------- 74 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTT--------
T ss_pred ccchHHHHHHcCCHHHHHHHHHCCCCCCCCC-----------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCC--------
Confidence 455677777 578888888888764322221 234789999999999999999999654321
Q ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHH
Q 002122 728 LDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDV 807 (964)
Q Consensus 728 le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dV 807 (964)
..+..|.||||+|+..|+.+++++|+++ |+ ++|..|..|.||||+|+. .|+.++
T Consensus 75 -~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~ 128 (169)
T 2y1l_E 75 -AVDHAGMTPLRLAALFGHLEIVEVLLKN-------GA-----------------DVNANDMEGHTPLHLAAM-FGHLEI 128 (169)
T ss_dssp -CCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHH
T ss_pred -ccCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCCCCCCCCCHHHHHHH-cCCHHH
Confidence 1245688999999999999999999999 77 788999999999999999 999999
Q ss_pred HHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 002122 808 LDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKI 854 (964)
Q Consensus 808 V~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ 854 (964)
+++|+++ |++++.+|..|.||||+|+..|+.+++++|.+.+
T Consensus 129 v~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 129 VEVLLKN------GADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHHHc------CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9999999 9999999999999999999999999999998753
|
| >1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A | Back alignment and structure |
|---|
Probab=99.84 E-value=3.1e-21 Score=194.52 Aligned_cols=194 Identities=17% Similarity=0.097 Sum_probs=154.6
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
+..|+++|... +.+..++.+++.++.....+..|.+++|.++ .+....+.||+.+..... .+. .......
T Consensus 46 g~t~L~~A~~~--~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~----~~~---~~~~~~g 116 (241)
T 1k1a_A 46 RQTPLHLAVIT--TLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGT----LDL---EARNYDG 116 (241)
T ss_dssp SCCHHHHHHHT--TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTS----CCT---TCCCTTS
T ss_pred CCCHHHHHHHc--CCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc----ccc---cccCcCC
Confidence 47788887654 6778889999988876655678899999998 477888888888764100 000 0112245
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++||+|+..++.++++.|++.+++... .....|.||||+|++.|+.++|++|+++ |+
T Consensus 117 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~--------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------- 174 (241)
T 1k1a_A 117 LTALHVAVNTECQETVQLLLERGADIDA--------VDIKSGRSPLIHAVENNSLSMVQLLLQH-------GA------- 174 (241)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC--------CCTTTCCCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCccc--------ccccCCCcHHHHHHHcCCHHHHHHHHHc-------CC-------
Confidence 7899999999999999999996543221 1124588999999999999999999999 77
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
++|..|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+.+|+.++++.|..
T Consensus 175 ----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~ 237 (241)
T 1k1a_A 175 ----------NVNAQMYSGSSALHSASG-RGLLPLVRTLVRS------GADSSLKNCHNDTPLMVARSRRVIDILRGKAT 237 (241)
T ss_dssp ----------CTTCBCTTSCBHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTSCCTTTTCSSHHHHHHHTC---
T ss_pred ----------CCCCcCCCCCCHHHHHHH-cCCHHHHHHHHhc------CCCCCCcCCCCCCHHHHHHhcCcHHHHhhhcc
Confidence 889999999999999999 9999999999999 99999999999999999999999999998877
Q ss_pred hhh
Q 002122 853 KIN 855 (964)
Q Consensus 853 k~a 855 (964)
+.+
T Consensus 238 ~~a 240 (241)
T 1k1a_A 238 RPA 240 (241)
T ss_dssp ---
T ss_pred CCC
Confidence 643
|
| >2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-20 Score=207.37 Aligned_cols=204 Identities=17% Similarity=0.131 Sum_probs=161.9
Q ss_pred CCCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccc
Q 002122 613 STFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRR 691 (964)
Q Consensus 613 s~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R 691 (964)
.+.+|+++|... +.+..++.+++.++.....+..|.+++|.++ .+.+..+.+|+.+.......... ...
T Consensus 165 ~g~TpL~~A~~~--g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~--------d~~ 234 (373)
T 2fo1_E 165 DENTPLMLAVLA--RRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEEL--------DRN 234 (373)
T ss_dssp TSCCHHHHHHHH--TCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCC--------CTT
T ss_pred CCCCHHHHHHHc--ChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhc--------CCC
Confidence 347899887654 6788899999998877666678899999999 58888899998876211111111 123
Q ss_pred cchHHHHHHHcC---chHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcc
Q 002122 692 FKWLIEFSMDHE---WCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSE 768 (964)
Q Consensus 692 ~k~lL~fAve~g---~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~ 768 (964)
..++||+|+..+ +.+++++|++.+++.+..... .....+..|.||||+||+.|+.++|++||+.. |+
T Consensus 235 g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~-~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~------~~--- 304 (373)
T 2fo1_E 235 GMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAA-RKDSEKYKGRTALHYAAQVSNMPIVKYLVGEK------GS--- 304 (373)
T ss_dssp SCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGG-GTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHS------CC---
T ss_pred CCCHHHHHHHhCCcchHHHHHHHHHCCCCccccccc-ccCcccccCCCHHHHHHHhCCHHHHHHHHHhc------CC---
Confidence 578999999998 899999999987654321100 00113456899999999999999999999872 25
Q ss_pred ccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHH
Q 002122 769 NKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIH 848 (964)
Q Consensus 769 ~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~ 848 (964)
++|..|..|.||||+|+. .|+.++|++|+++ ||+++.+|..|.||||+|+.+||.++++
T Consensus 305 --------------~~n~~d~~g~TpL~~A~~-~g~~~iv~~Ll~~------gad~~~~d~~g~t~l~~A~~~g~~~iv~ 363 (373)
T 2fo1_E 305 --------------NKDKQDEDGKTPIMLAAQ-EGRIEVVMYLIQQ------GASVEAVDATDHTARQLAQANNHHNIVD 363 (373)
T ss_dssp --------------CTTCCCTTCCCHHHHHHH-HTCHHHHHHHHHT------TCCSSCCCSSSCCHHHHHHHTTCHHHHH
T ss_pred --------------CccCcCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCccCCCCCCCCHHHHHHHcCCHHHHH
Confidence 889999999999999999 9999999999999 9999999999999999999999999999
Q ss_pred HHHHhhhcC
Q 002122 849 LVQKKINKR 857 (964)
Q Consensus 849 LL~~k~ak~ 857 (964)
+|.++.+++
T Consensus 364 ~Ll~~~a~~ 372 (373)
T 2fo1_E 364 IFDRCRPER 372 (373)
T ss_dssp HHHTTC---
T ss_pred HHHhcCccc
Confidence 999987654
|
| >2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.83 E-value=3e-20 Score=187.47 Aligned_cols=176 Identities=18% Similarity=0.106 Sum_probs=136.0
Q ss_pred CccccHHHH-HHHHHHHhhhhcc-cccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCC
Q 002122 649 GKIDTKNQA-MDFIHEIGWLFHR-SQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHP 726 (964)
Q Consensus 649 g~~~~h~~a-l~fL~EIGWLLqr-~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~ 726 (964)
|.+++|.+| .+.+..+.+|+.+ +......+ ....++||+|+..|+.++|++||+...+.... .
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~-----------~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~----~ 67 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRG-----------AMGETALHIAALYDNLEAAMVLMEAAPELVFE----P 67 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGC----C
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCC-----------CCCCCHHHHHHHcCCHHHHHHHHHcCchhccc----c
Confidence 578899998 5888889999887 43222221 23578999999999999999999976542110 0
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHH
Q 002122 727 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 806 (964)
Q Consensus 727 ~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~d 806 (964)
....+..|.||||+|+..|+.++|++||++ |+.... ......+.+.++..+..|.||||+|+. .|+.+
T Consensus 68 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~----~~~~~~~~~~~~~~~~~g~t~L~~A~~-~~~~~ 135 (232)
T 2rfa_A 68 MTSELYEGQTALHIAVINQNVNLVRALLAR-------GASVSA----RATGSVFHYRPHNLIYYGEHPLSFAAC-VGSEE 135 (232)
T ss_dssp CCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-------TCCTTC----CCCSGGGSCCTTCSCCCCSSHHHHHHH-HTCHH
T ss_pred ccccCCCCcCHHHHHHHcCCHHHHHHHHhC-------CCCCCc----ccCCcceeecccccccCCCCHHHHHHH-cCCHH
Confidence 111345689999999999999999999999 542111 011122345566677799999999999 99999
Q ss_pred HHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHH----HHHHHhhhcC
Q 002122 807 VLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYI----HLVQKKINKR 857 (964)
Q Consensus 807 VV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv----~LL~~k~ak~ 857 (964)
+|++|+++ |++++.+|..|.||||+|+..|+.+++ ++|.+++++.
T Consensus 136 ~v~~Ll~~------ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 136 IVRLLIEH------GADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp HHHHHHHT------TCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHC------CCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCch
Confidence 99999999 999999999999999999999999998 7777776643
|
| >4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A | Back alignment and structure |
|---|
Probab=99.83 E-value=3.5e-20 Score=184.11 Aligned_cols=125 Identities=26% Similarity=0.242 Sum_probs=114.0
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.+.|+.|+++|+.++|+.||+.+++.+. .+..|.||||+|+..++.+++++||+. |+
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~Gadvn~---------~d~~g~t~l~~a~~~~~~~~~~~ll~~-------ga------- 61 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIENGADVNA---------SDSDGRTPLHHAAENGHKEVVKLLISK-------GA------- 61 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTC---------CCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCCCC---------cCCCCCCHHHHHHHcCCHHHHHHHHhc-------cc-------
Confidence 4578999999999999999997654221 355699999999999999999999999 87
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
+++.+|..|+||||+|+. .|+.++|++|+++ ||++|.+|.+|+||||+|+..|+.+++++|.+
T Consensus 62 ----------d~~~~d~~g~TpLh~A~~-~g~~~~v~~Ll~~------gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~ 124 (169)
T 4gpm_A 62 ----------DVNAKDSDGRTPLHHAAE-NGHKEVVKLLISK------GADVNAKDSDGRTPLHHAAENGHKEVVKLLIS 124 (169)
T ss_dssp ----------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ----------chhhhccCCCCHHHHHHH-cCCHHHHHHHHHC------cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 899999999999999999 9999999999999 99999999999999999999999999999999
Q ss_pred hhhcC
Q 002122 853 KINKR 857 (964)
Q Consensus 853 k~ak~ 857 (964)
++++.
T Consensus 125 ~gad~ 129 (169)
T 4gpm_A 125 KGADV 129 (169)
T ss_dssp TTCCT
T ss_pred cCCCc
Confidence 88764
|
| >1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.83 E-value=3.3e-20 Score=176.93 Aligned_cols=149 Identities=14% Similarity=0.083 Sum_probs=122.5
Q ss_pred cccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchh
Q 002122 651 IDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLD 729 (964)
Q Consensus 651 ~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le 729 (964)
++++.++ .+.+..+.+|++++.... ......++||+|+..|+.+++++|++..++.+ .
T Consensus 4 ~~L~~A~~~g~~~~v~~Ll~~g~~~~------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~ 62 (153)
T 1awc_B 4 KKLLEAARAGQDDEVRILMANGAPFT------------TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD---------A 62 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTCCCC------------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT---------C
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCC------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------C
Confidence 3455565 466677777777653211 11235789999999999999999998654321 1
Q ss_pred hccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHH
Q 002122 730 LALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLD 809 (964)
Q Consensus 730 ~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~ 809 (964)
.+..|.||||+|+..|+.++|++|+++ |+ ++|.+|..|.||||+|+. .|+.++++
T Consensus 63 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~v~ 117 (153)
T 1awc_B 63 RTKVDRTPLHMAASEGHANIVEVLLKH-------GA-----------------DVNAKDMLKMTALHWATE-HNHQEVVE 117 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHHHH
T ss_pred CCCCCCCHHHHHHHcChHHHHHHHHHc-------CC-----------------CCCCCCCCCCCHHHHHHH-cCCHHHHH
Confidence 245588999999999999999999999 77 889999999999999999 99999999
Q ss_pred HhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 810 ALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 810 lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
+|+++ |++++.+|..|.||||+|+.+|+.+++++|+
T Consensus 118 ~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~ 153 (153)
T 1awc_B 118 LLIKY------GADVHTQSKFCKTAFDISIDNGNEDLAEILQ 153 (153)
T ss_dssp HHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHC
T ss_pred HHHHc------CCCccccCCCCCCHHHHHHHcCCHHHHHHhC
Confidence 99999 9999999999999999999999999999873
|
| >4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=3e-20 Score=196.06 Aligned_cols=181 Identities=14% Similarity=0.045 Sum_probs=141.2
Q ss_pred hhhhHHHHHHHHhhhcCc--chhhhhcCccccHHHH-HHHHHHHhhhhcccc-cccccCCCCCCCCCcCccccchHHHHH
Q 002122 624 DVCSEIRMLESALEFNRT--DADVERFGKIDTKNQA-MDFIHEIGWLFHRSQ-SKSRLGHLDPNTDLFPLRRFKWLIEFS 699 (964)
Q Consensus 624 ~iCsEI~~LE~~le~~a~--~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~-~~~~~~~~d~~l~l~ql~R~k~lL~fA 699 (964)
.+...+..++..++.... ....+..|.+++|.+| .+.+..+.+|++.+. ..... .....++||+|
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~~g~tpL~~a 152 (276)
T 4hbd_A 84 LVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQ-----------NRAGYSPIMLT 152 (276)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCC-----------CTTSCCHHHHG
T ss_pred HHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCC-----------CCCCCCHHHHH
Confidence 344455555555443322 1112456888999888 477888888888774 21111 12346789998
Q ss_pred H-----HcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccccc
Q 002122 700 M-----DHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 774 (964)
Q Consensus 700 v-----e~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~ 774 (964)
+ ..+..++++.|++.+... ...+..|.||||+|+..|+.++|++||++ |+
T Consensus 153 ~~~~~~~~~~~~~v~~Ll~~g~~~---------~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-------ga--------- 207 (276)
T 4hbd_A 153 ALATLKTQDDIETVLQLFRLGNIN---------AKASQAGQTALMLAVSHGRVDVVKALLAC-------EA--------- 207 (276)
T ss_dssp GGCCCCSHHHHHHHHHHHHHSCTT---------CCCTTTCCCHHHHHHHTTCHHHHHHHHHT-------TC---------
T ss_pred HHHHhhhhhhHHHHHHHHHcCCCc---------cccCCCCCCHHHHHHHcCCHHHHHHHHhC-------CC---------
Confidence 8 668888888888854221 11244588999999999999999999999 88
Q ss_pred ccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhc-CCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 002122 775 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD-DPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKK 853 (964)
Q Consensus 775 ~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~-~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k 853 (964)
++|.+|..|.||||+|+. .|+.++|++|++ . |++++.+|..|.||||+|+.+|+.+++++|.++
T Consensus 208 --------d~n~~d~~G~TpLh~A~~-~g~~~iv~~Ll~~~------gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 208 --------DVNVQDDDGSTALMCACE-HGHKEIAGLLLAVP------SCDISLTDRDGSTALMVALDAGQSEIASMLYSR 272 (276)
T ss_dssp --------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHTST------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred --------CCCCCCCCCCCHHHHHHH-CCCHHHHHHHHhcC------CCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 899999999999999999 999999999999 6 999999999999999999999999999999988
Q ss_pred hh
Q 002122 854 IN 855 (964)
Q Consensus 854 ~a 855 (964)
.+
T Consensus 273 ~~ 274 (276)
T 4hbd_A 273 MN 274 (276)
T ss_dssp CC
T ss_pred cC
Confidence 64
|
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=4.5e-20 Score=186.34 Aligned_cols=189 Identities=16% Similarity=0.136 Sum_probs=156.0
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
+..|+++|... +.+..++.+++.++.....+..|.+++|.++ .+.+..+.||+..+.. ... ......
T Consensus 44 g~t~L~~A~~~--~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~--~~~--------~~~~~g 111 (237)
T 3b7b_A 44 QRTPLMEAAEN--NHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQM--DVN--------CQDDGG 111 (237)
T ss_dssp CCCHHHHHHHT--TCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCC--CTT--------CCCTTS
T ss_pred CCCHHHHHHHh--CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC--Ccc--------cCCCCC
Confidence 46788887654 6788899999988876655677899999999 4888888999887621 011 111235
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++||+|+..++.++++.|++.+++.+. .+..|.||||+|++.|+.+++++|+++ |+
T Consensus 112 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~------- 168 (237)
T 3b7b_A 112 WTPMIWATEYKHVDLVKLLLSKGSDINI---------RDNEENICLHWAAFSGCVDIAEILLAA-------KC------- 168 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC---------CCTTSCCHHHHHHHHCCHHHHHHHHTT-------TC-------
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCc---------cCCCCCCHHHHHHHCCCHHHHHHHHHc-------CC-------
Confidence 7899999999999999999996543211 245688999999999999999999999 77
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
++|..|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+...+..|.+
T Consensus 169 ----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 169 ----------DLHAVNIHGDSPLHIAAR-ENRYDCVVLFLSR------DSDVTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp ----------CTTCCCTTCCCHHHHHHH-TTCHHHHHHHHTT------TCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred ----------CCCCcCCCCCCHHHHHHH-hCCHhHHHHHHHc------CCCCCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999 9999999999999 99999999999999999999999876666655
Q ss_pred hh
Q 002122 853 KI 854 (964)
Q Consensus 853 k~ 854 (964)
.+
T Consensus 232 ~l 233 (237)
T 3b7b_A 232 AL 233 (237)
T ss_dssp HH
T ss_pred Hh
Confidence 44
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.83 E-value=5.5e-20 Score=203.31 Aligned_cols=187 Identities=18% Similarity=0.191 Sum_probs=103.6
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccc
Q 002122 615 FFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFK 693 (964)
Q Consensus 615 ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k 693 (964)
..|+++|... ..+..++.+++.++.....+..|.+++|.++ .+.+..+.||+.++...... .....
T Consensus 213 ~t~L~~A~~~--~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-----------~~~g~ 279 (437)
T 1n11_A 213 YTPLHIAAKQ--NQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLG-----------NKSGL 279 (437)
T ss_dssp CCHHHHHHHT--TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCC-----------CTTCC
T ss_pred CCHHHHHHHc--CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCC-----------CCCCC
Confidence 4455444332 4445555555555443333344555555555 35555555555544211111 11234
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccc
Q 002122 694 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 773 (964)
Q Consensus 694 ~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv 773 (964)
++||+|+..|+.++++.|++.+++.+. .+..|.||||+|++.|+.++|++||++ |+
T Consensus 280 t~L~~A~~~~~~~~~~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga-------- 335 (437)
T 1n11_A 280 TPLHLVAQEGHVPVADVLIKHGVMVDA---------TTRMGYTPLHVASHYGNIKLVKFLLQH-------QA-------- 335 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTC---------CCSSCCCHHHHHHHSSCSHHHHHHHHT-------TC--------
T ss_pred CHHHHHHHcCCHHHHHHHHhCCccCCC---------CCCCCCCHHHHHHHcCcHHHHHHHHhc-------CC--------
Confidence 566666666666666666654332110 123355666666666666666666666 55
Q ss_pred cccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 002122 774 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKK 853 (964)
Q Consensus 774 ~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k 853 (964)
++|.+|..|.||||+|+. .|+.++|++|+++ ||+++.+|.+|.||||+|+..|+.+++++|...
T Consensus 336 ---------d~n~~~~~g~t~L~~A~~-~g~~~iv~~Ll~~------ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~ 399 (437)
T 1n11_A 336 ---------DVNAKTKLGYSPLHQAAQ-QGHTDIVTLLLKN------GASPNEVSSDGTTPLAIAKRLGYISVTDVLKVV 399 (437)
T ss_dssp ---------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred ---------CCCCCCCCCCCHHHHHHH-CChHHHHHHHHHC------cCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhc
Confidence 566666666666666666 6666666666666 666666666666666666666666666666554
Q ss_pred h
Q 002122 854 I 854 (964)
Q Consensus 854 ~ 854 (964)
.
T Consensus 400 ~ 400 (437)
T 1n11_A 400 T 400 (437)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.6e-20 Score=193.60 Aligned_cols=207 Identities=14% Similarity=0.056 Sum_probs=149.0
Q ss_pred CcceeecchhhhhHHHHHHHHhh----hcCcchh----hhhcCccccHHHHH----HHHHHHhhhhcccccccc----cC
Q 002122 615 FFPFIVAEEDVCSEIRMLESALE----FNRTDAD----VERFGKIDTKNQAM----DFIHEIGWLFHRSQSKSR----LG 678 (964)
Q Consensus 615 ffP~LVad~~iCsEI~~LE~~le----~~a~~~~----~~e~g~~~~h~~al----~fL~EIGWLLqr~~~~~~----~~ 678 (964)
..|++.|... +.+..++.+++ .+....+ .+..|.+++|.+|. +.+..+.+|++.+..... ..
T Consensus 14 ~t~L~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~ 91 (273)
T 2pnn_A 14 RRSIFDAVAQ--SNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVN 91 (273)
T ss_dssp HHHHHHHHHT--TCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHT
T ss_pred chHHHHHHHc--CCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhh
Confidence 5677776644 44444444443 3332221 14578999999985 677777777776531100 00
Q ss_pred CCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC-----CCchhhccCCCcHHHHHHHcCCHHHHHHH
Q 002122 679 HLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE-----HPSLDLALTELGLLHRAVRKNSRPLVDLL 753 (964)
Q Consensus 679 ~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~-----~~~le~~l~G~TpLH~AVr~g~~e~VelL 753 (964)
.. . ........++||+|+..|+.++|++||+.+++.+..... ......+..|.||||+|++.|+.++|++|
T Consensus 92 ~~---~-~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 167 (273)
T 2pnn_A 92 AS---Y-TDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFL 167 (273)
T ss_dssp CC---C-CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHH
T ss_pred cc---c-ccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 00 0 001124578999999999999999999976543321100 00000112589999999999999999999
Q ss_pred hc---cCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCC---------HHHHHHhhcCCCCCccc
Q 002122 754 LR---FVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS---------EDVLDALTDDPGMVGIE 821 (964)
Q Consensus 754 L~---~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~---------~dVV~lLL~~p~~vg~g 821 (964)
|+ + |+ ++|.+|..|+||||+|+. .|+ .+++++|+++ |
T Consensus 168 l~~~~~-------ga-----------------d~~~~d~~g~tpLh~A~~-~~~~~~~~~~~~~~~v~~Ll~~------g 216 (273)
T 2pnn_A 168 LQNSWQ-------PA-----------------DISARDSVGNTVLHALVE-VADNTVDNTKFVTSMYNEILIL------G 216 (273)
T ss_dssp HHCSSC-------CC-----------------CTTCCCTTSCCHHHHHHH-HCCSCHHHHHHHHHHHHHHHHH------H
T ss_pred HhcccC-------CC-----------------CceeeCCCCCcHHHHHHH-ccCcchhHHHHHHHHHHHHHHh------h
Confidence 99 6 77 899999999999999999 777 7999999999 9
Q ss_pred cccc-------cCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 822 AWKN-------ARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 822 Adin-------arD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
+++| .+|..|.||||+|+.+||.+++++|.+++++-+
T Consensus 217 a~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp 260 (273)
T 2pnn_A 217 AKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEP 260 (273)
T ss_dssp HHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--
T ss_pred hhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCc
Confidence 9997 499999999999999999999999999998544
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.83 E-value=6.9e-20 Score=202.53 Aligned_cols=202 Identities=19% Similarity=0.217 Sum_probs=166.2
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
+..|+++|... ..+..++.+++.++.....+..+.+++|.++ .+.+..+.||++.+......+ ...
T Consensus 179 g~t~L~~A~~~--~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-----------~~g 245 (437)
T 1n11_A 179 GLTPLHVAVHH--NNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAES-----------VQG 245 (437)
T ss_dssp CCCHHHHHHHT--TCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTC
T ss_pred CCCHHHHHHHc--CCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC-----------CCC
Confidence 46788877654 6677888899888876555567899999998 478888899988775322222 124
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++||+|+..|+.++|++|++..++.+. .+..|.||||+|++.|+.+++++|+++ |+
T Consensus 246 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~---------~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~------- 302 (437)
T 1n11_A 246 VTPLHLAAQEGHAEMVALLLSKQANGNL---------GNKSGLTPLHLVAQEGHVPVADVLIKH-------GV------- 302 (437)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCTTC---------CCTTCCCHHHHHHHHTCHHHHHHHHHH-------TC-------
T ss_pred CCHHHHHHHCCCHHHHHHHHhcCCCCCC---------CCCCCCCHHHHHHHcCCHHHHHHHHhC-------Cc-------
Confidence 7899999999999999999997554221 245688999999999999999999999 77
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
++|..+..|.||||+|+. .|+.++|++|+++ |+++|.+|..|.||||+|+.+||.+++++|.+
T Consensus 303 ----------~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~------gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~ 365 (437)
T 1n11_A 303 ----------MVDATTRMGYTPLHVASH-YGNIKLVKFLLQH------QADVNAKTKLGYSPLHQAAQQGHTDIVTLLLK 365 (437)
T ss_dssp ----------CTTCCCSSCCCHHHHHHH-SSCSHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ----------cCCCCCCCCCCHHHHHHH-cCcHHHHHHHHhc------CCCCCCCCCCCCCHHHHHHHCChHHHHHHHHH
Confidence 889999999999999999 9999999999999 99999999999999999999999999999999
Q ss_pred hhhcCCC---CCCceeecC
Q 002122 853 KINKRPN---GGHVVVDIC 868 (964)
Q Consensus 853 k~ak~~~---~~~v~v~ip 868 (964)
++++... .+.+.++++
T Consensus 366 ~ga~~~~~~~~g~t~l~~A 384 (437)
T 1n11_A 366 NGASPNEVSSDGTTPLAIA 384 (437)
T ss_dssp TTCCSCCCCSSSCCHHHHH
T ss_pred CcCCCCCCCCCCCCHHHHH
Confidence 9876432 344555544
|
| >1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-20 Score=177.52 Aligned_cols=125 Identities=22% Similarity=0.220 Sum_probs=113.2
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
...++||+|+..|+.++|+.||+..++.+ ..+..|.||||+|+. ++.++|++||++ |+
T Consensus 11 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-------g~----- 68 (136)
T 1d9s_A 11 SSDAGLATAAARGQVETVRQLLEAGADPN---------ALNRFGRRPIQVMMM-GSAQVAELLLLH-------GA----- 68 (136)
T ss_dssp CCSCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTCCTTTTTSTT-SCHHHHHHHHHH-------TC-----
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCcC---------CcCCCCCCHHHHHHc-CCHHHHHHHHHC-------CC-----
Confidence 45789999999999999999999654321 124568999999999 999999999999 77
Q ss_pred ccccccccccccCCCcCCCC-CChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHH
Q 002122 771 ALVDGVHKGFLFRPDVIGPA-GLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHL 849 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~~d~~-G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~L 849 (964)
++|.+|.. |.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++
T Consensus 69 ------------~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~~~~ 129 (136)
T 1d9s_A 69 ------------EPNCADPATLTRPVHDAAR-EGFLDTLVVLHRA------GARLDVCDAWGRLPVDLAEEQGHRDIARY 129 (136)
T ss_dssp ------------CSSCCBTTTTBCHHHHHHH-HTCHHHHHHHHHT------CCCCCCCSSSSSCHHHHHHHHTCHHHHHH
T ss_pred ------------CCCCcCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHH
Confidence 88999999 9999999999 9999999999999 99999999999999999999999999999
Q ss_pred HHHhhhc
Q 002122 850 VQKKINK 856 (964)
Q Consensus 850 L~~k~ak 856 (964)
|.+++++
T Consensus 130 Ll~~Gad 136 (136)
T 1d9s_A 130 LHAATGD 136 (136)
T ss_dssp HHHHHCC
T ss_pred HHHcCCC
Confidence 9998864
|
| >4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.3e-21 Score=202.92 Aligned_cols=182 Identities=18% Similarity=0.101 Sum_probs=134.5
Q ss_pred CcceeecchhhhhHH-HHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 615 FFPFIVAEEDVCSEI-RMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 615 ffP~LVad~~iCsEI-~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
..|++.+.. +... ..++.+++.|++....+..|.+++|.+| .+.+..+.+|+..+......+ ...
T Consensus 53 ~t~L~~a~~--~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~-----------~~g 119 (269)
T 4b93_B 53 CHPLCQCPK--CAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARN-----------ADQ 119 (269)
T ss_dssp ------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCC-----------TTC
T ss_pred CCHHHHHHH--hCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccC-----------CCC
Confidence 567666542 2332 3567777888776555678999999999 477778888888774322221 234
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++|++|+..++.++++.||+..++.+ ..+..|.||||+||+.|+.++|++||++ |+
T Consensus 120 ~t~l~~a~~~~~~~~~~~Ll~~g~~~n---------~~d~~g~TpL~~A~~~g~~~~v~~Ll~~-------ga------- 176 (269)
T 4b93_B 120 AVPLHLACQQGHFQVVKCLLDSNAKPN---------KKDLSGNTPLIYACSGGHHELVALLLQH-------GA------- 176 (269)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSC---------CCCTTCCCHHHHHHHTTCGGGHHHHHHT-------TC-------
T ss_pred CCccccccccChHHHHHHHHHCCCCCC---------CCCCCCCCHHHHHHHCCCHHHHHHHHHC-------CC-------
Confidence 789999999999999999999654322 1355689999999999999999999999 88
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
++|..+..|.||||+||. .|+.++|++|+++ ||+++++|..|.||||+|+.+++ ++++|+
T Consensus 177 ----------dvn~~~~~g~t~Lh~A~~-~g~~~~v~~Ll~~------Gad~~~~d~~G~TpL~~A~~~~~--i~~lL~ 236 (269)
T 4b93_B 177 ----------SINASNNKGNTALHEAVI-EKHVFVVELLLLH------GASVQVLNKRQRTAVDCAEQNSK--IMELLQ 236 (269)
T ss_dssp ----------CTTCBCTTSCBHHHHHHH-TTCHHHHHHHHHT------TCCSCCCCTTSCCSGGGSCTTCH--HHHHTT
T ss_pred ----------CCCccccCCCcHHHHHHH-cCCHHHHHHHHHC------CCCCCCcCCCCCCHHHHHHhCCc--HHHHHH
Confidence 899999999999999999 9999999999999 99999999999999999987765 555553
|
| >2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C | Back alignment and structure |
|---|
Probab=99.83 E-value=4.1e-20 Score=173.68 Aligned_cols=124 Identities=22% Similarity=0.153 Sum_probs=111.6
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
...++||+|+..|+.++|+.||+..++.+ ..+..|.||||+||..|+.++|++||++ |+
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~----- 71 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGADVN---------AKDEYGLTPLYLATAHGHLEIVEVLLKN-------GA----- 71 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC-----
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----
Confidence 45789999999999999999999654321 1245688999999999999999999999 77
Q ss_pred ccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 002122 771 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 850 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL 850 (964)
++|..|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|
T Consensus 72 ------------~~~~~d~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~tpl~~A~~~~~~~~~~~L 132 (136)
T 2jab_A 72 ------------DVNAVDAIGFTPLHLAAF-IGHLEIAEVLLKH------GADVNAQDKFGKTAFDISIGNGNEDLAEIL 132 (136)
T ss_dssp ------------CTTCCCTTCCCHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ------------CCCcCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCcCcCCCCCCHHHHHHHCCCHHHHHHH
Confidence 889999999999999999 9999999999999 999999999999999999999999999999
Q ss_pred HHhh
Q 002122 851 QKKI 854 (964)
Q Consensus 851 ~~k~ 854 (964)
.+++
T Consensus 133 l~~G 136 (136)
T 2jab_A 133 QKLN 136 (136)
T ss_dssp HHC-
T ss_pred HHcC
Confidence 8764
|
| >3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.5e-20 Score=179.27 Aligned_cols=157 Identities=19% Similarity=0.143 Sum_probs=123.9
Q ss_pred cCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCC
Q 002122 648 FGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHP 726 (964)
Q Consensus 648 ~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~ 726 (964)
.+.++++.++ .+.+..+.++++..... .. ....+..++||+|+..|+.+++++||+..++.+
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~--~~--------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------- 69 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQSVN--CR--------DIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH------- 69 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTT--CC--------CTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-------
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcCCCC--cc--------ccccCCCCHHHHHHHcChHHHHHHHHhcCCCCC-------
Confidence 3456777777 57788888887754210 00 111234689999999999999999998654321
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHH
Q 002122 727 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 806 (964)
Q Consensus 727 ~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~d 806 (964)
..+..|.||||+|++.|+.++|++|+++ |+ ++|..|..|.||||+|+. .|+.+
T Consensus 70 --~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~ 122 (165)
T 3twr_A 70 --AKDKGGLVPLHNACSYGHYEVAELLVKH-------GA-----------------VVNVADLWKFTPLHEAAA-KGKYE 122 (165)
T ss_dssp --CCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CTTCCCTTCCCHHHHHHH-TTCHH
T ss_pred --ccCCCCCCHHHHHHHcCcHHHHHHHHhC-------CC-----------------CCCCcCCCCCCHHHHHHH-cCCHH
Confidence 1244588999999999999999999998 77 788889999999999999 99999
Q ss_pred HHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 002122 807 VLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKIN 855 (964)
Q Consensus 807 VV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~a 855 (964)
++++|+++ |++++.+|..|.||||+|+. |+.+++++|.++++
T Consensus 123 ~v~~Ll~~------ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 123 ICKLLLQH------GADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHHHHHHT------TCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHHHHHHc------CCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 99999999 99999999999999999876 89999999988764
|
| >1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=164.60 Aligned_cols=124 Identities=27% Similarity=0.298 Sum_probs=112.5
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
+++||+|+..|+.++++.|++...+.+ ..+..|.||||+|+..++.+++++|++. |+
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~---------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~------- 59 (126)
T 1n0r_A 3 RTPLHLAARNGHLEVVKLLLEAGADVN---------AKDKNGRTPLHLAARNGHLEVVKLLLEA-------GA------- 59 (126)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTT---------CCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC-------
T ss_pred ccHHHHHHHcCcHHHHHHHHHcCCCCC---------CcCCCCCcHHHHHHHcCcHHHHHHHHHc-------CC-------
Confidence 679999999999999999999654321 1244588999999999999999999999 76
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
+++..+..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.+
T Consensus 60 ----------~~~~~~~~g~t~l~~A~~-~~~~~~~~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 122 (126)
T 1n0r_A 60 ----------DVNAKDKNGRTPLHLAAR-NGHLEVVKLLLEA------GADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 122 (126)
T ss_dssp ----------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ----------CCcccCCCCCcHHHHHHH-cChHHHHHHHHHc------CCCCcccCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 788899999999999999 9999999999999 99999999999999999999999999999999
Q ss_pred hhhc
Q 002122 853 KINK 856 (964)
Q Consensus 853 k~ak 856 (964)
++++
T Consensus 123 ~Gad 126 (126)
T 1n0r_A 123 AGAY 126 (126)
T ss_dssp HTCC
T ss_pred cCCC
Confidence 8864
|
| >1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.82 E-value=4.3e-20 Score=192.88 Aligned_cols=216 Identities=14% Similarity=0.080 Sum_probs=159.9
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccc
Q 002122 615 FFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFK 693 (964)
Q Consensus 615 ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k 693 (964)
-.|++.|... +.+..++.+++.+++....+..|.+++|.+| .+.+..+.||++++......+ ....
T Consensus 41 ~t~l~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~-----------~~g~ 107 (299)
T 1s70_B 41 GAVFLAACSS--GDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPD-----------NEGW 107 (299)
T ss_dssp HHHHHHHHHH--TCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTSC
T ss_pred ccHHHHHHHc--CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-----------CCCC
Confidence 4567766544 8889999999998876655678999999999 488888999998875322222 2357
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccc----
Q 002122 694 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSEN---- 769 (964)
Q Consensus 694 ~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~---- 769 (964)
+|||+|+..|+.++|++||+.+++.+. .+..|.||||+|+..++.++++.|+... |.....
T Consensus 108 tpL~~A~~~g~~~~v~~Ll~~g~~~~~---------~~~~g~t~l~~A~~~~~~~~~~~ll~~~------~~~~~~~~~~ 172 (299)
T 1s70_B 108 IPLHAAASCGYLDIAEYLISQGAHVGA---------VNSEGDTPLDIAEEEAMEELLQNEVNRQ------GVDIEAARKE 172 (299)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTC---------CCTTSCCHHHHCCSHHHHHHHHHHHHHH------TCCHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCCC---------cCCCCCCHHHHHHhcchHHHHHHHHhhc------CCCchhhhhh
Confidence 899999999999999999996543221 2456889999999999999998777531 110000
Q ss_pred ---------cccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHH
Q 002122 770 ---------KALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARL 840 (964)
Q Consensus 770 ---------~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~ 840 (964)
+.+.... .......+..|.||||+||. .|+.++|++|+++ |+++|.+|..|.||||+|+.
T Consensus 173 ~~~~~~~~~~~~l~~~----~~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~------g~d~~~~d~~g~tpL~~A~~ 241 (299)
T 1s70_B 173 EERIMLRDARQWLNSG----HINDVRHAKSGGTALHVAAA-KGYTEVLKLLIQA------RYDVNIKDYDGWTPLHAAAH 241 (299)
T ss_dssp HHHHHHHHHHHHHHHT----CCCCCCCTTTCCCHHHHHHH-HTCHHHHHHHHTT------TCCTTCCCTTCCCHHHHHHH
T ss_pred hhhHHHHHHHHHHhcc----CcchhhhcCCCCCHHHHHHH-CCcHHHHHHHHHc------CCCCCCcCCCCCcHHHHHHh
Confidence 0000000 01233456789999999999 8999999999999 99999999999999999999
Q ss_pred cCCHHHHHHHHHhhhcCC---CCCCceeecCC
Q 002122 841 RGHYSYIHLVQKKINKRP---NGGHVVVDICG 869 (964)
Q Consensus 841 rGh~svv~LL~~k~ak~~---~~~~v~v~ip~ 869 (964)
.|+.+++++|.+++++.. ..+.+.++++.
T Consensus 242 ~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~ 273 (299)
T 1s70_B 242 WGKEEACRILVENLCDMEAVNKVGQTAFDVAD 273 (299)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCC
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 999999999999987643 24556666653
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D | Back alignment and structure |
|---|
Probab=99.81 E-value=1e-19 Score=187.12 Aligned_cols=189 Identities=17% Similarity=0.092 Sum_probs=138.8
Q ss_pred hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC
Q 002122 646 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE 724 (964)
Q Consensus 646 ~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~ 724 (964)
+..|.+++|.+| .+.+..+.+|+.++....... .......+|||+|+..|+.++|++||+.+++.+.
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~---- 73 (282)
T 1oy3_D 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLD--------LQNDLGQTALHLAAILGEASTVEKLYAAGAGVLV---- 73 (282)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGG--------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC----
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccc--------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC----
Confidence 456899999999 488888888887764311111 1112357899999999999999999997553221
Q ss_pred CCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCc------------ccccccc-----------ccccccc
Q 002122 725 HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGS------------ENKALVD-----------GVHKGFL 781 (964)
Q Consensus 725 ~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~------------~~~~lv~-----------~a~~~y~ 781 (964)
.+..|.||||+|++.|+.++|++|++..+....+.... ...++.. .....+.
T Consensus 74 -----~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (282)
T 1oy3_D 74 -----AERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWR 148 (282)
T ss_dssp -----CCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGG
T ss_pred -----CCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhh
Confidence 24568999999999999999999999832210000000 0000000 0011123
Q ss_pred cCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCC-CCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 782 FRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDS-SGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 782 fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~-~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
.+++..+..|.||||+|+. .|+.++|++|+++ |++++.+|. .|.||||+|+.+|+.+++++|.+++++..
T Consensus 149 ~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~------g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~ 219 (282)
T 1oy3_D 149 LQLEAENYDGHTPLHVAVI-HKDAEMVRLLRDA------GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPT 219 (282)
T ss_dssp GGTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHH------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred hcCCCcCCCCcCHHHHHHH-cCCHHHHHHHHHc------CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 4678899999999999999 9999999999999 999999996 49999999999999999999999987643
|
| >4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-19 Score=192.44 Aligned_cols=233 Identities=15% Similarity=0.019 Sum_probs=156.6
Q ss_pred cceeecchhhhhHHHHHHHHhhhcCcchhh-hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCC------------
Q 002122 616 FPFIVAEEDVCSEIRMLESALEFNRTDADV-ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLD------------ 681 (964)
Q Consensus 616 fP~LVad~~iCsEI~~LE~~le~~a~~~~~-~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d------------ 681 (964)
.|++.|.+. +.+..++.+++.|++.... ++.|.+++|.+| .+.+..+.+||+++......+...
T Consensus 27 t~L~~Av~~--g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 104 (337)
T 4g8k_A 27 HLLIKAVQN--EDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGS 104 (337)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred hHHHHHHHc--CCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhccc
Confidence 455554443 6677777777777654332 234677777777 366666667766654322211110
Q ss_pred -----------CCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCC-CchhhccCCCcHHHHHHHcCCHHH
Q 002122 682 -----------PNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEH-PSLDLALTELGLLHRAVRKNSRPL 749 (964)
Q Consensus 682 -----------~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~-~~le~~l~G~TpLH~AVr~g~~e~ 749 (964)
..++ ..-....++|++|+..|+.++++.|++.+++.+...... .....+..|.||||+||++|+.++
T Consensus 105 ~~~~~~~~~~~~~~~-~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~ 183 (337)
T 4g8k_A 105 VKLLKLFLSKGADVN-ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEV 183 (337)
T ss_dssp HHHHHHHHTTTCCTT-CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHH
T ss_pred chhhHHhhhccchhh-hhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHH
Confidence 0011 122345789999999999999999999876544321111 111234568999999999999999
Q ss_pred HHHHhccC-CCcc-ccccCcccccccc----ccccc----------cccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhc
Q 002122 750 VDLLLRFV-PLEV-SDRLGSENKALVD----GVHKG----------FLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 813 (964)
Q Consensus 750 VelLL~~~-p~~~-~dGa~~~~~~lv~----~a~~~----------y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~ 813 (964)
|++||... .+.. .+.. ..+++.. +.... ..-++|.+|..|+||||+|+. .|+.++|++|++
T Consensus 184 v~~LL~~~gad~n~~d~~--g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~-~~~~~~v~~Ll~ 260 (337)
T 4g8k_A 184 LKILLDEMGADVNACDNM--GRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVE-KKHLGLVQRLLE 260 (337)
T ss_dssp HHHHHHHSCCCTTCCCTT--SCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHH-TTCHHHHHHHHT
T ss_pred HHHHHhccCCCcCccCCC--CCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH-hhhhHHHHHHHH
Confidence 99999641 1100 0000 1122221 11111 114788999999999999999 999999999998
Q ss_pred CCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCCC
Q 002122 814 DPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPN 859 (964)
Q Consensus 814 ~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~~ 859 (964)
.. ++++|.+|.+|.||||+|+.+||.++|++|++++++...
T Consensus 261 ~~-----~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~ 301 (337)
T 4g8k_A 261 QE-----HIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC 301 (337)
T ss_dssp ST-----TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT
T ss_pred hc-----CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 63 899999999999999999999999999999999987653
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.81 E-value=5.1e-19 Score=181.03 Aligned_cols=200 Identities=14% Similarity=0.028 Sum_probs=160.0
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
+..|+++|... +.+..++.+++.++.....+..|.+++|.++ .+.+..+.+|++++......+ ...
T Consensus 39 g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-----------~~g 105 (285)
T 1wdy_A 39 GWTPLHNAVQM--SREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECD-----------FYG 105 (285)
T ss_dssp CCCHHHHHHHT--TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBC-----------TTC
T ss_pred CCcHHHHHHHc--CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC-----------ccc
Confidence 46788887654 6778889999988876655678899999998 588888899988774322222 234
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCC-chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHP-SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~-~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
.++||+|+..++.+++++|++.+.+......... ....+..|.||||+|++.|+.++|++|++.. |+
T Consensus 106 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~------~~------ 173 (285)
T 1wdy_A 106 FTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEM------GA------ 173 (285)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTS------CC------
T ss_pred CCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhc------CC------
Confidence 7899999999999999999997654332111000 0011456889999999999999999999762 44
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCC----HHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS----EDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYI 847 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~----~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv 847 (964)
+++..+..|.||||+|+. .++ .+++++|+++ |++++.+|..|.||||+|+.+|+.+++
T Consensus 174 -----------~~~~~~~~g~t~l~~a~~-~~~~~~~~~i~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v 235 (285)
T 1wdy_A 174 -----------DVNACDNMGRNALIHALL-SSDDSDVEAITHLLLDH------GADVNVRGERGKTPLILAVEKKHLGLV 235 (285)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-CSCTTTHHHHHHHHHHT------TCCSSCCCTTSCCHHHHHHHTTCHHHH
T ss_pred -----------CCCccCCCCCCHHHHHHH-ccccchHHHHHHHHHHc------CCCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 788999999999999999 888 9999999999 999999999999999999999999999
Q ss_pred HHHHH-hhhc
Q 002122 848 HLVQK-KINK 856 (964)
Q Consensus 848 ~LL~~-k~ak 856 (964)
++|.+ .+++
T Consensus 236 ~~Ll~~~g~~ 245 (285)
T 1wdy_A 236 QRLLEQEHIE 245 (285)
T ss_dssp HHHHHSSSCC
T ss_pred HHHHhccCCC
Confidence 99988 4543
|
| >3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A | Back alignment and structure |
|---|
Probab=99.81 E-value=8.9e-20 Score=178.36 Aligned_cols=160 Identities=18% Similarity=0.108 Sum_probs=131.5
Q ss_pred CccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCc
Q 002122 649 GKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS 727 (964)
Q Consensus 649 g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~ 727 (964)
+..+++.+| .+.+..+.++++.... ... .......++||+|+..|+.++|++||+..++.+.
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~--~~~--------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------- 67 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTEN--DLN--------QGDDHGFSPLHWACREGRSAVVEMLIMRGARINV------- 67 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTS--CTT--------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcc--ccc--------ccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC-------
Confidence 345677777 5778888888876421 011 1112346899999999999999999996543221
Q ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHH
Q 002122 728 LDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDV 807 (964)
Q Consensus 728 le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dV 807 (964)
.+..|.||||+|+..|+.++|++||++ |+ ++|..|..|.||||+|+. .|+.++
T Consensus 68 --~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~d~~g~t~L~~A~~-~~~~~~ 120 (179)
T 3f6q_A 68 --MNRGDDTPLHLAASHGHRDIVQKLLQY-------KA-----------------DINAVNEHGNVPLHYACF-WGQDQV 120 (179)
T ss_dssp --CCTTCCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHH
T ss_pred --cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCccCCCCCCHHHHHHH-cCCHHH
Confidence 245688999999999999999999999 77 889999999999999999 999999
Q ss_pred HHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 808 LDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 808 V~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
+++|+++ |++++.+|..|.||||+|+..++.+++++|.+++++..
T Consensus 121 v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~ 165 (179)
T 3f6q_A 121 AEDLVAN------GALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLN 165 (179)
T ss_dssp HHHHHHT------TCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHC------CCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 9999999 99999999999999999999999999999999987754
|
| >1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-19 Score=187.58 Aligned_cols=171 Identities=14% Similarity=0.040 Sum_probs=134.3
Q ss_pred cCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCC
Q 002122 648 FGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHP 726 (964)
Q Consensus 648 ~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~ 726 (964)
.+.+.++.+| .+.+..+.+|+.++......+ ....++||+|+..|+.++|++||+.+++.+.
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------ 101 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGADINYAN-----------VDGLTALHQACIDDNVDMVKFLVENGANINQ------ 101 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBC-----------TTCCBHHHHHHHTTCHHHHHHHHHTTCCTTC------
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCcccC-----------CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------
Confidence 4567788888 588999999998774322222 2357899999999999999999996543211
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHH
Q 002122 727 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 806 (964)
Q Consensus 727 ~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~d 806 (964)
.+..|.||||+|+..|+.++|++||++ |+ +++..+..|.||||+|+. .|+.+
T Consensus 102 ---~~~~g~tpL~~A~~~g~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~l~~A~~-~~~~~ 153 (299)
T 1s70_B 102 ---PDNEGWIPLHAAASCGYLDIAEYLISQ-------GA-----------------HVGAVNSEGDTPLDIAEE-EAMEE 153 (299)
T ss_dssp ---CCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHCCS-HHHHH
T ss_pred ---CCCCCCcHHHHHHHcCCHHHHHHHHhC-------CC-----------------CCCCcCCCCCCHHHHHHh-cchHH
Confidence 245688999999999999999999999 77 889999999999999999 89999
Q ss_pred HHHHhhcCCCCCccccccc--------------------------cCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC--
Q 002122 807 VLDALTDDPGMVGIEAWKN--------------------------ARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP-- 858 (964)
Q Consensus 807 VV~lLL~~p~~vg~gAdin--------------------------arD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~-- 858 (964)
+++.|+... +++++ ..|..|.||||+|+.+|+.+++++|.+++++..
T Consensus 154 ~~~~ll~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~ 228 (299)
T 1s70_B 154 LLQNEVNRQ-----GVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIK 228 (299)
T ss_dssp HHHHHHHHH-----TCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCC
T ss_pred HHHHHHhhc-----CCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCc
Confidence 998777542 33332 367899999999999999999999999876543
Q ss_pred -CCCCceeecC
Q 002122 859 -NGGHVVVDIC 868 (964)
Q Consensus 859 -~~~~v~v~ip 868 (964)
..+.+.++++
T Consensus 229 d~~g~tpL~~A 239 (299)
T 1s70_B 229 DYDGWTPLHAA 239 (299)
T ss_dssp CTTCCCHHHHH
T ss_pred CCCCCcHHHHH
Confidence 2344444443
|
| >1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.4e-20 Score=179.17 Aligned_cols=127 Identities=23% Similarity=0.218 Sum_probs=111.4
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
...++||+|+..|+.++|+.||+.+++.+ ..+..|.||||+|+ .|+.++|++||++ |+
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~-~~~~~~v~~Ll~~-------g~----- 68 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAGANPN---------APNSYGRRPIQVMM-MGSARVAELLLLH-------GA----- 68 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTCCTT---------CCCSSSCCTTTSSC-TTCHHHHHHHHTT-------TC-----
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcCCCCC---------CCCCCCCCHHHHHH-cCCHHHHHHHHHc-------CC-----
Confidence 45789999999999999999999654321 12456899999996 8999999999999 77
Q ss_pred ccccccccccccCCCcCCCCCCh-HHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHH
Q 002122 771 ALVDGVHKGFLFRPDVIGPAGLT-PIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHL 849 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~~d~~G~T-PLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~L 849 (964)
++|.+|..|.| |||+|+. .|+.++|++|+++ |++++.+|..|.||||+|+..|+.+++++
T Consensus 69 ------------~~~~~d~~g~ttpL~~A~~-~~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~v~~ 129 (156)
T 1bi7_B 69 ------------EPNCADPATLTRPVHDAAR-EGFLDTLVVLHRA------GARLDVRDAWGRLPVDLAEELGHRDVARY 129 (156)
T ss_dssp ------------CCCCCCTTTCCCHHHHHHH-HTCHHHHHHHHHH------TCCSSCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred ------------CCCCcCCCCCcHHHHHHHH-CCCHHHHHHHHHc------CCCCcccCCCCCCHHHHHHHhCHHHHHHH
Confidence 88999999999 9999999 9999999999999 99999999999999999999999999999
Q ss_pred HHHhhhcCC
Q 002122 850 VQKKINKRP 858 (964)
Q Consensus 850 L~~k~ak~~ 858 (964)
|.+++++..
T Consensus 130 Ll~~ga~~~ 138 (156)
T 1bi7_B 130 LRAAAGGTR 138 (156)
T ss_dssp HSSCC----
T ss_pred HHHcCCCCC
Confidence 999887653
|
| >3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} | Back alignment and structure |
|---|
Probab=99.81 E-value=5.8e-20 Score=194.48 Aligned_cols=189 Identities=15% Similarity=0.055 Sum_probs=153.5
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
+..|+++|... +.+..++.+++.++..... +|.+++|.+| .+.+..+.+|++++......+ ...
T Consensus 31 g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d-----------~~g 95 (285)
T 3kea_A 31 GHSASYYAIAD--NNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFD-----------DKG 95 (285)
T ss_dssp SCCHHHHHHHT--TCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCC-----------TTS
T ss_pred CCCHHHHHHHc--CCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC-----------CCC
Confidence 47888887664 7788889999887765432 5889999998 477888888888774322222 235
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCC-CcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTE-LGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G-~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
.+|||+|+..|+.++|++||+.+++.+. .+..| .||||+|+..|+.++|++|+++ |+
T Consensus 96 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~---------~~~~g~~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 153 (285)
T 3kea_A 96 NTALYYAVDSGNMQTVKLFVKKNWRLMF---------YGKTGWKTSFYHAVMLNDVSIVSYFLSE-------IP------ 153 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGGG---------CSSSGGGSHHHHHHHTTCHHHHHHHHTT-------SC------
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCc---------cCCCCCCCHHHHHHHcCCHHHHHHHHhC-------CC------
Confidence 7899999999999999999997554221 23446 7999999999999999999999 44
Q ss_pred cccccccccccCCCcCCC-CCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCH-HHHHHHcCCHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGP-AGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTP-EDYARLRGHYSYIHL 849 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~-~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TP-Lh~A~~rGh~svv~L 849 (964)
+ ..+. .|.||||+|+. .|+.++|++|+++ |++++.+|..|.|| ||+|+..|+.+++++
T Consensus 154 -----------~--~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~------gad~n~~~~~g~t~~L~~A~~~~~~~~v~~ 213 (285)
T 3kea_A 154 -----------S--TFDLAILLSCIHITIK-NGHVDMMILLLDY------MTSTNTNNSLLFIPDIKLAIDNKDIEMLQA 213 (285)
T ss_dssp -----------T--TCCCSTHHHHHHHHHH-TTCHHHHHHHHHH------HHHTCTTCCCBCCTTHHHHHHHTCHHHHHH
T ss_pred -----------c--cccccCCccHHHHHHH-cChHHHHHHHHHc------CCCCCcccCCCCChHHHHHHHcCCHHHHHH
Confidence 2 2233 89999999999 9999999999999 99999999999998 999999999999999
Q ss_pred HHHhhhcCCC
Q 002122 850 VQKKINKRPN 859 (964)
Q Consensus 850 L~~k~ak~~~ 859 (964)
|.+++++...
T Consensus 214 Ll~~gad~~~ 223 (285)
T 3kea_A 214 LFKYDINIYS 223 (285)
T ss_dssp HTTSCBCSTT
T ss_pred HHHcCCCCCC
Confidence 9999887653
|
| >2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-19 Score=181.68 Aligned_cols=186 Identities=17% Similarity=0.108 Sum_probs=148.7
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcC--cchh-hhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNR--TDAD-VERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPL 689 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a--~~~~-~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql 689 (964)
+..|+++|... +.++.++.+++.++ +... .+..|.+++|.++ .+.+..+.+|++++.... .. ...
T Consensus 36 g~t~L~~A~~~--~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~--------~~~ 104 (228)
T 2dzn_A 36 GRIPLHWSVSF--QAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPD-LN--------KIT 104 (228)
T ss_dssp SCCHHHHHHHT--TCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCC-TT--------CCC
T ss_pred CCCHHHHHHHc--CCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcc-cc--------cCC
Confidence 47888887654 67788889998884 3333 3567899999999 588888899988762100 01 111
Q ss_pred cccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccc-cCcc
Q 002122 690 RRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDR-LGSE 768 (964)
Q Consensus 690 ~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dG-a~~~ 768 (964)
....++||+|+..++.++++.|++.+++.+. .+..|.||||+|++.|+.+++++|+++ | +
T Consensus 105 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~--- 165 (228)
T 2dzn_A 105 NQGVTCLHLAVGKKWFEVSQFLIENGASVRI---------KDKFNQIPLHRAASVGSLKLIELLCGL-------GKS--- 165 (228)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCSCC---------CCTTSCCHHHHHHHTTCHHHHHHHHTT-------TCC---
T ss_pred cCCCCHHHHHHHcCCHhHHHHHHHcCCCccc---------cCCCCCCHHHHHHHcCCHHHHHHHHhc-------Ccc---
Confidence 2357899999999999999999996543211 245688999999999999999999999 6 4
Q ss_pred ccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhh-cCCCCCccccccccCCCCCCCHHHHHHHcCCHHHH
Q 002122 769 NKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT-DDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYI 847 (964)
Q Consensus 769 ~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL-~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv 847 (964)
++|.+|..|.||||+|+. .|+.+++++|+ ++ ||+++.+|..|.||||+|... +++
T Consensus 166 --------------~~~~~d~~g~t~L~~A~~-~~~~~~v~~Ll~~~------ga~~~~~~~~g~t~l~~A~~~---~~~ 221 (228)
T 2dzn_A 166 --------------AVNWQDKQGWTPLFHALA-EGHGDAAVLLVEKY------GAEYDLVDNKGAKAEDVALNE---QVK 221 (228)
T ss_dssp --------------CSCCCCTTSCCHHHHHHH-TTCHHHHHHHHHHH------CCCSCCBCTTSCBGGGGCSST---THH
T ss_pred --------------cccCcCCCCCCHHHHHHH-cCCHHHHHHHHHhc------CCCCCccCCCCCcHHHHHHHH---HHH
Confidence 789999999999999999 99999999999 78 999999999999999999765 466
Q ss_pred HHHHHh
Q 002122 848 HLVQKK 853 (964)
Q Consensus 848 ~LL~~k 853 (964)
++|.++
T Consensus 222 ~~l~~~ 227 (228)
T 2dzn_A 222 KFFLNN 227 (228)
T ss_dssp HHHHTT
T ss_pred HHHHhc
Confidence 666654
|
| >2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2e-19 Score=184.80 Aligned_cols=135 Identities=21% Similarity=0.093 Sum_probs=113.0
Q ss_pred ccchHHHHHHHc---CchHHHHHHhhhhccCcc-c--CCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccc
Q 002122 691 RFKWLIEFSMDH---EWCAVVKKLLHILLDGTV-S--LGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDR 764 (964)
Q Consensus 691 R~k~lL~fAve~---g~~aVVk~LL~~l~d~~v-d--~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dG 764 (964)
...++||+|+.. |+.++|++||+.+++... + .+. .....+..|.||||+|+..|+.++|++||++ |
T Consensus 42 ~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------g 113 (256)
T 2etb_A 42 TGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA-QCTDEFYQGHSALHIAIEKRSLQCVKLLVEN-------G 113 (256)
T ss_dssp TTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC-CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-------T
T ss_pred CCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc-ccccccccCCCHHHHHHHcCCHHHHHHHHHc-------C
Confidence 357899999999 999999999998765431 1 000 0011235689999999999999999999999 6
Q ss_pred cCccccccccccccccccCCCcCCCC-------------CChHHHHHHhhCCCHHHHHHhhc---CCCCCccccccccCC
Q 002122 765 LGSENKALVDGVHKGFLFRPDVIGPA-------------GLTPIHIAAGKDGSEDVLDALTD---DPGMVGIEAWKNARD 828 (964)
Q Consensus 765 a~~~~~~lv~~a~~~y~fdpn~~d~~-------------G~TPLHiAA~~~G~~dVV~lLL~---~p~~vg~gAdinarD 828 (964)
+ ++|..+.. |.||||+|+. .|+.++|++|++ + |+++|.+|
T Consensus 114 a-----------------~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~-~~~~~~v~~Ll~~~~~------ga~~n~~d 169 (256)
T 2etb_A 114 A-----------------DVHLRACGRFFQKHQGTCFYFGELPLSLAAC-TKQWDVVTYLLENPHQ------PASLEATD 169 (256)
T ss_dssp C-----------------CTTCCCCSGGGSCCSSSCCCSCSSHHHHHHH-TTCHHHHHHHHHCSSC------CCCTTCCC
T ss_pred C-----------------CCCcccccccccccccccccCCCCHHHHHHH-cCCHHHHHHHHhcccc------CCCcCccC
Confidence 6 55655554 9999999999 999999999999 8 99999999
Q ss_pred CCCCCHHHHHHH--cCCHH-------HHHHHHHhhhcC
Q 002122 829 SSGSTPEDYARL--RGHYS-------YIHLVQKKINKR 857 (964)
Q Consensus 829 ~~G~TPLh~A~~--rGh~s-------vv~LL~~k~ak~ 857 (964)
..|.||||+|+. .++.+ ++++|.+++++.
T Consensus 170 ~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 170 SLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp TTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence 999999999999 88988 999999998765
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.3e-19 Score=191.57 Aligned_cols=188 Identities=15% Similarity=0.067 Sum_probs=152.9
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
+..|+++|... +.+..++.+++.++.....+..|.+++|.++ .+.+..+.+|++++..... ....
T Consensus 92 g~t~L~~A~~~--g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------~~~g 157 (285)
T 3d9h_A 92 HVSPLHEACLG--GHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP------------ESDL 157 (285)
T ss_dssp CCCHHHHHHHT--TCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC------------SCTT
T ss_pred CCCHHHHHHHC--CcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCC------------CCCC
Confidence 47899887754 6778888899988876656678899999999 5888888899887642111 1125
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++||+|+..|+.+++++|++..++.+ ..+..|.||||+|+..|+.++|++||++ |+
T Consensus 158 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-------ga------- 214 (285)
T 3d9h_A 158 ASPIHEAARRGHVECVNSLIAYGGNID---------HKISHLGTPLYLACENQQRACVKKLLES-------GA------- 214 (285)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHTTCCTT---------CCBTTTBCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCC---------CcCCCCCCHHHHHHHcCcHHHHHHHHHC-------CC-------
Confidence 789999999999999999999654321 1355688999999999999999999999 77
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
++|. +..|.||||+|+. .|+.+++++|+++ ||+++.+|..|.||||+|+ ++.+++++|.+
T Consensus 215 ----------~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~------gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~ 274 (285)
T 3d9h_A 215 ----------DVNQ-GKGQDSPLHAVVR-TASEELACLLMDF------GADTQAKNAEGKRPVELVP--PESPLAQLFLE 274 (285)
T ss_dssp ----------CTTC-CBTTBCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCGGGGSC--TTSHHHHHHHH
T ss_pred ----------CCCC-CCCCCCHHHHHHH-cCCHHHHHHHHHC------CCCCCCcCCCCCCHHHHhc--CccHHHHHHHH
Confidence 6674 7899999999999 9999999999999 9999999999999999999 56789998888
Q ss_pred h-hhcCC
Q 002122 853 K-INKRP 858 (964)
Q Consensus 853 k-~ak~~ 858 (964)
+ +++..
T Consensus 275 ~~~a~l~ 281 (285)
T 3d9h_A 275 REGASLP 281 (285)
T ss_dssp HC-----
T ss_pred hhccCCC
Confidence 7 55543
|
| >1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B | Back alignment and structure |
|---|
Probab=99.80 E-value=2.7e-19 Score=170.10 Aligned_cols=150 Identities=23% Similarity=0.252 Sum_probs=122.4
Q ss_pred cccHHHH-HHHHHHHhhhhcccc-cccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCch
Q 002122 651 IDTKNQA-MDFIHEIGWLFHRSQ-SKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSL 728 (964)
Q Consensus 651 ~~~h~~a-l~fL~EIGWLLqr~~-~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~l 728 (964)
++++.+| .+.+..+.+++++.. ..... .....++||+ +..|+.++++.|++.+++.+.
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-----------~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~-------- 63 (156)
T 1bd8_A 4 DRLSGAAARGDVQEVRRLLHRELVHPDAL-----------NRFGKTALQV-MMFGSTAIALELLKQGASPNV-------- 63 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCCTTCC-----------CTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTC--------
T ss_pred hHHHHHHHhCCHHHHHHHHHhhCcCcccc-----------CCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCC--------
Confidence 4566676 577788888887621 11111 1235789999 999999999999996543211
Q ss_pred hhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHH
Q 002122 729 DLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVL 808 (964)
Q Consensus 729 e~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV 808 (964)
.+..|.||||+|++.|+.++|++|+++ |+ ++|..|..|.||||+|+. .|+.+++
T Consensus 64 -~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~v 117 (156)
T 1bd8_A 64 -QDTSGTSPVHDAARTGFLDTLKVLVEH-------GA-----------------DVNVPDGTGALPIHLAVQ-EGHTAVV 117 (156)
T ss_dssp -CCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CSCCCCTTSCCHHHHHHH-HTCHHHH
T ss_pred -cCCCCCCHHHHHHHcCcHHHHHHHHHc-------CC-----------------CCCCcCCCCCcHHHHHHH-hChHHHH
Confidence 245688999999999999999999999 77 889999999999999999 9999999
Q ss_pred HHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 002122 809 DALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKK 853 (964)
Q Consensus 809 ~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k 853 (964)
++|+++ ++++.+|..|.||||+|+..|+.+++++|.++
T Consensus 118 ~~Ll~~-------~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 118 SFLAAE-------SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHTT-------SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHhc-------cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 999975 67889999999999999999999999999875
|
| >3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.9e-19 Score=178.68 Aligned_cols=213 Identities=14% Similarity=0.081 Sum_probs=131.8
Q ss_pred cceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccch
Q 002122 616 FPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKW 694 (964)
Q Consensus 616 fP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~ 694 (964)
+|++.|. ..+.+..++.+++.+......+..|.+++|.++ .+.+..+.||++++....... .....+
T Consensus 11 ~~l~~A~--~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~----------~~~~~t 78 (240)
T 3eu9_A 11 WDIVKAT--QYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLG----------GDLNST 78 (240)
T ss_dssp CCHHHHH--HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB----------TTTTBC
T ss_pred hHHHHHH--HcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhc----------CCcCCC
Confidence 4444433 336666677777766655444556677777776 366666777776654211111 011246
Q ss_pred HHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccccc
Q 002122 695 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 774 (964)
Q Consensus 695 lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~ 774 (964)
+||+|+..++.++++.|++..++... .+..|.||||+|+..|+.+++++|+++..+..... ....++++.
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~g~~~~~---------~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~g~t~l~~ 148 (240)
T 3eu9_A 79 PLHWATRQGHLSMVVQLMKYGADPSL---------IDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMD-QNGMTPLMW 148 (240)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTC---------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHH
T ss_pred hhHHHHHcCCHHHHHHHHHcCCCCcc---------cCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccC-CCCCcHHHH
Confidence 77777777777777777765432111 13346677777777777777777777622211000 001123322
Q ss_pred ccccc-----------cccCCCcCCC-CCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcC
Q 002122 775 GVHKG-----------FLFRPDVIGP-AGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRG 842 (964)
Q Consensus 775 ~a~~~-----------y~fdpn~~d~-~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rG 842 (964)
....+ +..+++..+. .|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+.+|
T Consensus 149 a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~ 221 (240)
T 3eu9_A 149 AAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVL-AGNTTVISLLLEA------GANVDAQNIKGESALDLAKQRK 221 (240)
T ss_dssp HHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHH-HTCHHHHHHHHHH------TCCTTCBCTTSCBHHHHHHHTT
T ss_pred HHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcC
Confidence 21111 0136676775 88899999998 8899999999988 8899999999999999999999
Q ss_pred CHHHHHHHHHhhhcC
Q 002122 843 HYSYIHLVQKKINKR 857 (964)
Q Consensus 843 h~svv~LL~~k~ak~ 857 (964)
+.+++++|.+++++.
T Consensus 222 ~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 222 NVWMINHLQEARQAK 236 (240)
T ss_dssp CHHHHHHHHHHC---
T ss_pred cHHHHHHHHHhhhcc
Confidence 999999888887654
|
| >3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* | Back alignment and structure |
|---|
Probab=99.80 E-value=4.8e-19 Score=170.23 Aligned_cols=127 Identities=24% Similarity=0.203 Sum_probs=112.8
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++|+.|+..|+.++++.|++... .+ ....+..|.||||+|+..|+.++|++|+++ |+
T Consensus 8 ~~~~l~~A~~~g~~~~v~~ll~~~~---~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 66 (165)
T 3twr_A 8 ADRQLLEAAKAGDVETVKKLCTVQS---VN-----CRDIEGRQSTPLHFAAGYNRVSVVEYLLQH-------GA------ 66 (165)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTT---TT-----CCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred hhHHHHHHHHhCCHHHHHHHHHcCC---CC-----ccccccCCCCHHHHHHHcChHHHHHHHHhc-------CC------
Confidence 4679999999999999999998421 11 112345588999999999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
++|..|..|.||||+|+. .|+.+++++|+++ |++++.+|.+|.||||+|+..|+.+++++|.
T Consensus 67 -----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 128 (165)
T 3twr_A 67 -----------DVHAKDKGGLVPLHNACS-YGHYEVAELLVKH------GAVVNVADLWKFTPLHEAAAKGKYEICKLLL 128 (165)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCccCCCCCCHHHHHHH-cCcHHHHHHHHhC------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 889999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcC
Q 002122 852 KKINKR 857 (964)
Q Consensus 852 ~k~ak~ 857 (964)
+++++.
T Consensus 129 ~~ga~~ 134 (165)
T 3twr_A 129 QHGADP 134 (165)
T ss_dssp HTTCCT
T ss_pred HcCCCC
Confidence 987654
|
| >1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.80 E-value=4.8e-19 Score=168.95 Aligned_cols=124 Identities=21% Similarity=0.141 Sum_probs=112.9
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++|+.|+..|+.++|+.|++...+.. .+..|.||||+|+..|+.++|++|++. |+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------- 58 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT----------TDWLGTSPLHLAAQYGHFSTTEVLLRA-------GV------- 58 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC----------CCTTCCCHHHHHHHHTCHHHHHHHHTT-------TC-------
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC----------cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-------
Confidence 579999999999999999999654211 245688999999999999999999998 76
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
++|..+..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+.+|+.+++++|.+
T Consensus 59 ----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 121 (153)
T 1awc_B 59 ----------SRDARTKVDRTPLHMAAS-EGHANIVEVLLKH------GADVNAKDMLKMTALHWATEHNHQEVVELLIK 121 (153)
T ss_dssp ----------CTTCCCTTCCCHHHHHHH-HTCHHHHHHHHTT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ----------CCCCCCCCCCCHHHHHHH-cChHHHHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 789999999999999999 9999999999999 99999999999999999999999999999999
Q ss_pred hhhcC
Q 002122 853 KINKR 857 (964)
Q Consensus 853 k~ak~ 857 (964)
++++.
T Consensus 122 ~ga~~ 126 (153)
T 1awc_B 122 YGADV 126 (153)
T ss_dssp TTCCT
T ss_pred cCCCc
Confidence 87654
|
| >2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.8e-19 Score=187.32 Aligned_cols=178 Identities=17% Similarity=0.071 Sum_probs=131.4
Q ss_pred hhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHc---CchHHHHHHhhhhccCc
Q 002122 644 DVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDH---EWCAVVKKLLHILLDGT 719 (964)
Q Consensus 644 ~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~---g~~aVVk~LL~~l~d~~ 719 (964)
+.+..|.+++|.+| .+.+..+.+||+....... ...+ .....-....++||+|+.. |+.++|++||+.+++..
T Consensus 8 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~--~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~ 84 (273)
T 2pnn_A 8 PPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKK-RLTD--SEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTD 84 (273)
T ss_dssp ---CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCC-CTTS--GGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTT
T ss_pred CCCcccchHHHHHHHcCCHHHHHHHHHHHhhccc-ccCC--cccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcccc
Confidence 34567888999998 4666666666653210000 0000 0001122457899999987 99999999999875422
Q ss_pred -----ccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCC-----
Q 002122 720 -----VSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGP----- 789 (964)
Q Consensus 720 -----vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~----- 789 (964)
++... ...+..|.||||+||+.|+.++|++||++ |+ ++|..+.
T Consensus 85 ~~~~~i~~~~---~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-------ga-----------------~~~~~~~~~~~~ 137 (273)
T 2pnn_A 85 SLKQFVNASY---TDSYYKGQTALHIAIERRNMTLVTLLVEN-------GA-----------------DVQAAANGDFFK 137 (273)
T ss_dssp CHHHHHTCCC---CSTTTTTCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CTTCCBCSGGGS
T ss_pred chhHHhhccc---ccccCCCCCHHHHHHHcCCHHHHHHHHHC-------CC-----------------CcCccccccccc
Confidence 11110 11245689999999999999999999999 66 5555554
Q ss_pred ---------CCChHHHHHHhhCCCHHHHHHhhc---CCCCCccccccccCCCCCCCHHHHHHHcCC---------HHHHH
Q 002122 790 ---------AGLTPIHIAAGKDGSEDVLDALTD---DPGMVGIEAWKNARDSSGSTPEDYARLRGH---------YSYIH 848 (964)
Q Consensus 790 ---------~G~TPLHiAA~~~G~~dVV~lLL~---~p~~vg~gAdinarD~~G~TPLh~A~~rGh---------~svv~ 848 (964)
.|.||||+|+. .|+.++|++|++ + |++++.+|..|.||||+|+..|+ .++++
T Consensus 138 ~~~~~~~~~~g~tpL~~A~~-~g~~~~v~~Ll~~~~~------gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~ 210 (273)
T 2pnn_A 138 KTKGRPGFYFGELPLSLAAC-TNQLAIVKFLLQNSWQ------PADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYN 210 (273)
T ss_dssp SCSSSCCCCSCBSHHHHHHH-TTCHHHHHHHHHCSSC------CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred cccccccccCCCCHHHHHHH-cCCHHHHHHHHhcccC------CCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHH
Confidence 79999999999 999999999999 7 99999999999999999999998 89999
Q ss_pred HHHHhhhcCC
Q 002122 849 LVQKKINKRP 858 (964)
Q Consensus 849 LL~~k~ak~~ 858 (964)
+|.+++++..
T Consensus 211 ~Ll~~ga~~n 220 (273)
T 2pnn_A 211 EILILGAKLH 220 (273)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHhhhhcc
Confidence 9999987653
|
| >3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=7.4e-19 Score=175.75 Aligned_cols=159 Identities=18% Similarity=0.149 Sum_probs=102.1
Q ss_pred hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC
Q 002122 646 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE 724 (964)
Q Consensus 646 ~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~ 724 (964)
++.+.++++.++ .+.+..+.+|++++......+ ....++||+|+..|+.++|+.|++...+....
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~-----------~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--- 71 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEAGYDVRQPD-----------KENVTLLHWAAINNRIDLVKYYISKGAIVDQL--- 71 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC---
T ss_pred ccccchHHHHHHHcCChHHHHHHHHcCCCcCCCC-----------CCCCCHHHHHHHhCCHHHHHHHHHcCCcchhh---
Confidence 345678889988 588888999988774322221 23468999999999999999999976532211
Q ss_pred CCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCC
Q 002122 725 HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS 804 (964)
Q Consensus 725 ~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~ 804 (964)
....|.||||+|+..|+.+++++|+++ |+ +++..+..|.||||+|+. .|+
T Consensus 72 -----~~~~~~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~l~~A~~-~~~ 121 (240)
T 3eu9_A 72 -----GGDLNSTPLHWATRQGHLSMVVQLMKY-------GA-----------------DPSLIDGEGCSCIHLAAQ-FGH 121 (240)
T ss_dssp -----BTTTTBCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTC
T ss_pred -----cCCcCCChhHHHHHcCCHHHHHHHHHc-------CC-----------------CCcccCCCCCCHHHHHHH-cCH
Confidence 133478999999999999999999998 54 444444445555555554 455
Q ss_pred HHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCC-HHHHHHHHHhh
Q 002122 805 EDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGH-YSYIHLVQKKI 854 (964)
Q Consensus 805 ~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh-~svv~LL~~k~ 854 (964)
.+++++|+++ +++++.+|..|.||||+|+.+++ .+++++|.+++
T Consensus 122 ~~~~~~Ll~~------~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~ 166 (240)
T 3eu9_A 122 TSIVAYLIAK------GQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFN 166 (240)
T ss_dssp HHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTT
T ss_pred HHHHHHHHhc------CCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcC
Confidence 5555555544 44444444444444444443333 34444444443
|
| >3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A | Back alignment and structure |
|---|
Probab=99.79 E-value=6.8e-19 Score=170.32 Aligned_cols=126 Identities=17% Similarity=0.108 Sum_probs=112.0
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++||+|+..|+.++++.||+...+ .....+..|.||||+|++.|+.++|++||++ |+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~--------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------- 60 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDN--------LVNKPDERGFTPLIWASAFGEIETVRFLLEW-------GA------- 60 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSG--------GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH-------TC-------
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcc--------cccCCCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-------
Confidence 4589999999999999999985321 1111345689999999999999999999999 77
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
++|..+..|.||||+|+. .|+.+++++|+++ +++++.+|..|.||||+|+..|+.+++++|.+
T Consensus 61 ----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 123 (172)
T 3v30_A 61 ----------DPHILAKERESALSLAST-GGYTDIVGLLLER------DVDINIYDWNGGTPLLYAVRGNHVKCVEALLA 123 (172)
T ss_dssp ----------CTTCCCTTCCCHHHHHHH-TTCHHHHHHHHTT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ----------CchhhcccCCCHHHHHHH-CCCHHHHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 889999999999999999 9999999999999 99999999999999999999999999999999
Q ss_pred hhhcC
Q 002122 853 KINKR 857 (964)
Q Consensus 853 k~ak~ 857 (964)
++++.
T Consensus 124 ~ga~~ 128 (172)
T 3v30_A 124 RGADL 128 (172)
T ss_dssp TTCCT
T ss_pred cCCCc
Confidence 87654
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.5e-19 Score=192.53 Aligned_cols=199 Identities=14% Similarity=0.067 Sum_probs=163.9
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
+..|+++|... +.+..++.+++.++.....+..|.+++|.+| .+.+..+.+|+.++.... ....
T Consensus 20 g~t~L~~Aa~~--g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-------------~~~g 84 (364)
T 3ljn_A 20 NMEKIHVAARK--GQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHS-------------LWHG 84 (364)
T ss_dssp HHHHHHHHHHH--TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCC-------------CBTT
T ss_pred CCCHHHHHHHc--CCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcc-------------ccCC
Confidence 47788887654 8889999999998877666778999999999 588888999998875111 1235
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCC------C------CchhhccCCCcHHHHHHHcC--CHHHHHHHhccCC
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE------H------PSLDLALTELGLLHRAVRKN--SRPLVDLLLRFVP 758 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~------~------~~le~~l~G~TpLH~AVr~g--~~e~VelLL~~~p 758 (964)
.++||+|+..|+.++|++||+...+.+.+... . .....+..|.||||+|+..| +.++|++||++
T Consensus 85 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~-- 162 (364)
T 3ljn_A 85 QKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL-- 162 (364)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH--
T ss_pred CCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc--
Confidence 78999999999999999999974331111000 0 00013556899999999999 99999999999
Q ss_pred CccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccc-----cccCCCCCCC
Q 002122 759 LEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAW-----KNARDSSGST 833 (964)
Q Consensus 759 ~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAd-----inarD~~G~T 833 (964)
|+ ++|..|..|.||||+|+. .|+.++|++|+++ +++ +|.+|..|.|
T Consensus 163 -----ga-----------------~~~~~d~~g~t~L~~A~~-~g~~~~v~~Ll~~------g~~~~~~~~~~~~~~g~t 213 (364)
T 3ljn_A 163 -----GA-----------------SPTAKDKADETPLMRAME-FRNREALDLMMDT------VPSKSSLRLDYANKQGNS 213 (364)
T ss_dssp -----TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHH------CSCSSSCCTTCCCTTCCC
T ss_pred -----CC-----------------CCcccCCCCCCHHHHHHH-cCCHHHHHHHHhc------ccccccccccccCCCCCc
Confidence 77 899999999999999999 9999999999998 888 9999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 834 PEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 834 PLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
|||+|+..||.+++++|.+++++..
T Consensus 214 ~L~~A~~~g~~~~v~~Ll~~gad~~ 238 (364)
T 3ljn_A 214 HLHWAILINWEDVAMRFVEMGIDVN 238 (364)
T ss_dssp TTHHHHTTTCHHHHHHHHTTTCCTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999999999999987643
|
| >3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A | Back alignment and structure |
|---|
Probab=99.79 E-value=7.9e-19 Score=171.63 Aligned_cols=127 Identities=23% Similarity=0.200 Sum_probs=112.1
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
+.++|+.|+..|+.++|+.||+... .+. ...+..|.||||+|+..|+.++|++||+. |+
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~---~~~-----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 63 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTE---NDL-----NQGDDHGFSPLHWACREGRSAVVEMLIMR-------GA------ 63 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTT---SCT-----TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCc---ccc-----cccCCCCCCHHHHHHHcCcHHHHHHHHHc-------CC------
Confidence 3568999999999999999998421 111 11355688999999999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
++|..+..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.
T Consensus 64 -----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 125 (179)
T 3f6q_A 64 -----------RINVMNRGDDTPLHLAAS-HGHRDIVQKLLQY------KADINAVNEHGNVPLHYACFWGQDQVAEDLV 125 (179)
T ss_dssp -----------CTTCCCTTCCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCCcCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 889999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcC
Q 002122 852 KKINKR 857 (964)
Q Consensus 852 ~k~ak~ 857 (964)
+++++.
T Consensus 126 ~~ga~~ 131 (179)
T 3f6q_A 126 ANGALV 131 (179)
T ss_dssp HTTCCS
T ss_pred HCCCCc
Confidence 988764
|
| >1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E | Back alignment and structure |
|---|
Probab=99.79 E-value=2.3e-19 Score=182.18 Aligned_cols=172 Identities=14% Similarity=-0.003 Sum_probs=131.9
Q ss_pred hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC
Q 002122 646 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE 724 (964)
Q Consensus 646 ~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~ 724 (964)
+..|.+++|.+| .+.+..+.+|+...... ..+ ++ .......+|||+|+..|+.++|++||+.+++.+.
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~----~~~--~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---- 73 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGD----LAF--LN-FQNNLQQTPLHLAVITNQPEIAEALLGAGCDPEL---- 73 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC---------CCC--CC-CCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCC----
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhcc----HHH--hh-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC----
Confidence 457889999998 46666677776654210 000 01 1222357899999999999999999986543211
Q ss_pred CCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCC
Q 002122 725 HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS 804 (964)
Q Consensus 725 ~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~ 804 (964)
.+..|.||||+|++.|+.++|++|++. |+. ..+....+..+..|.||||+|+. .|+
T Consensus 74 -----~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------~~~-----------~~~~~~~~~~~~~g~t~L~~A~~-~~~ 129 (236)
T 1ikn_D 74 -----RDFRGNTPLHLACEQGCLASVGVLTQS-------CTT-----------PHLHSILKATNYNGHTCLHLASI-HGY 129 (236)
T ss_dssp -----CCTTCCCHHHHHHHHTCHHHHHHHHHS-------TTT-----------TSSSCGGGCCCTTCCCHHHHHHH-TTC
T ss_pred -----cCCCCCCHHHHHHHcCCHHHHHHHHhc-------ccc-----------hhHHHHhhccCCCCCCHHHHHHH-cCC
Confidence 245689999999999999999999998 431 01111356788899999999999 999
Q ss_pred HHHHHHhhcCCCCCccccccccCCC-CCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 805 EDVLDALTDDPGMVGIEAWKNARDS-SGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 805 ~dVV~lLL~~p~~vg~gAdinarD~-~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
.++|++|+++ |++++.+|. .|.||||+|+..|+.+++++|.+++++..
T Consensus 130 ~~~v~~Ll~~------g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 178 (236)
T 1ikn_D 130 LGIVELLVSL------GADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN 178 (236)
T ss_dssp HHHHHHHHHH------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSC
T ss_pred HHHHHHHHHc------CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999 999999998 99999999999999999999999987643
|
| >2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=169.10 Aligned_cols=126 Identities=22% Similarity=0.216 Sum_probs=113.7
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++|+.|+..|+.++|+.|++.+++.+ ..+..|.||||+|++.|+.++|++|++. |+
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 71 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANGADVN---------AEDASGWTPLHLAAFNGHLEIVEVLLKN-------GA------ 71 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred ccchHHHHHHcCCHHHHHHHHHCCCCCC---------CCCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC------
Confidence 4679999999999999999999654321 1245688999999999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
++|..+..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.
T Consensus 72 -----------~~~~~~~~g~t~L~~A~~-~~~~~~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 133 (169)
T 2y1l_E 72 -----------DVNAVDHAGMTPLRLAAL-FGHLEIVEVLLKN------GADVNANDMEGHTPLHLAAMFGHLEIVEVLL 133 (169)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCccCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 788999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcC
Q 002122 852 KKINKR 857 (964)
Q Consensus 852 ~k~ak~ 857 (964)
+++++.
T Consensus 134 ~~g~~~ 139 (169)
T 2y1l_E 134 KNGADV 139 (169)
T ss_dssp HTTCCT
T ss_pred HcCCCC
Confidence 987654
|
| >3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-18 Score=170.77 Aligned_cols=161 Identities=11% Similarity=-0.002 Sum_probs=133.1
Q ss_pred cCccccHHHH-HHHHHHHhhhhccccc-ccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCC
Q 002122 648 FGKIDTKNQA-MDFIHEIGWLFHRSQS-KSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEH 725 (964)
Q Consensus 648 ~g~~~~h~~a-l~fL~EIGWLLqr~~~-~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~ 725 (964)
.+.++++.+| .+.+..+.++|.+... .... .....++||+|+..|+.++|++||+.+++.+.
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-----------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~----- 67 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTYQVDEV-----------DTEGNTPLNIAVHNNDIEIAKALIDRGADINL----- 67 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCC-----------CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-----
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCCCCCCC-----------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-----
Confidence 3567888888 5888888888877631 1111 12357899999999999999999996543221
Q ss_pred CchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCH
Q 002122 726 PSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSE 805 (964)
Q Consensus 726 ~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~ 805 (964)
.+..|.||||+|+..|+.+++++|++.. ++ +++..+..|.||||+|+. .|+.
T Consensus 68 ----~~~~g~t~l~~A~~~~~~~~~~~Ll~~~------~~-----------------~~~~~~~~g~t~L~~A~~-~~~~ 119 (201)
T 3hra_A 68 ----QNSISDSPYLYAGAQGRTEILAYMLKHA------TP-----------------DLNKHNRYGGNALIPAAE-KGHI 119 (201)
T ss_dssp ----CCTTSCCHHHHHHHTTCHHHHHHHHHHS------CC-----------------CTTCCCTTSCCSHHHHHH-TTCH
T ss_pred ----CCCCCCCHHHHHHHcCCHHHHHHHHhcc------Cc-----------------ccccccCCCCcHHHHHHH-cCCH
Confidence 2456889999999999999999999652 44 788899999999999999 9999
Q ss_pred HHHHHhhcCCCCCccc-cccccCCCCCCCHHHHHHHcCC-----HHHHHHHHHhhhcCC
Q 002122 806 DVLDALTDDPGMVGIE-AWKNARDSSGSTPEDYARLRGH-----YSYIHLVQKKINKRP 858 (964)
Q Consensus 806 dVV~lLL~~p~~vg~g-AdinarD~~G~TPLh~A~~rGh-----~svv~LL~~k~ak~~ 858 (964)
+++++|+++ + ++++.+|..|.||||+|+..++ .+++++|.+++++..
T Consensus 120 ~~v~~Ll~~------g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~ 172 (201)
T 3hra_A 120 DNVKLLLED------GREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQS 172 (201)
T ss_dssp HHHHHHHHH------CCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHc------CCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCC
Confidence 999999999 7 9999999999999999999988 999999999987643
|
| >3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.1e-18 Score=182.11 Aligned_cols=207 Identities=16% Similarity=0.056 Sum_probs=150.2
Q ss_pred cceeecchhhhhHHHHHHHHhhh-cCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccc
Q 002122 616 FPFIVAEEDVCSEIRMLESALEF-NRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFK 693 (964)
Q Consensus 616 fP~LVad~~iCsEI~~LE~~le~-~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k 693 (964)
.|++.|.. .+.+..++.++.. +......+..|.+++|.+| .+.+..+.||++++......+ ....
T Consensus 26 ~~L~~A~~--~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g~ 92 (351)
T 3utm_A 26 DELLEAAR--SGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKD-----------KGGL 92 (351)
T ss_dssp HHHHHHHH--HTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTCC
T ss_pred hhHHHHHH--cCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC-----------CCCC
Confidence 34444443 4677777777764 2332233567899999999 588999999998875322222 2357
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccc----
Q 002122 694 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSEN---- 769 (964)
Q Consensus 694 ~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~---- 769 (964)
+|||+|+..|+.++|++||+..++.+. .+..|.||||+|+..|+.++|++||++ |+.+..
T Consensus 93 t~L~~A~~~g~~~iv~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~ 156 (351)
T 3utm_A 93 VPLHNACSYGHYEVTELLLKHGACVNA---------MDLWQFTPLHEAASKNRVEVCSLLLSH-------GADPTLVNCH 156 (351)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTC---------CCTTCCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTT
T ss_pred cHHHHHHHCCCHHHHHHHHHCCCCCCC---------CCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCCccccCC
Confidence 899999999999999999996543221 245688999999999999999999998 442211
Q ss_pred --ccccccccc-------------------------------ccccCCCcCCCCCChHHHHHHhhC---CCHHHHHHhhc
Q 002122 770 --KALVDGVHK-------------------------------GFLFRPDVIGPAGLTPIHIAAGKD---GSEDVLDALTD 813 (964)
Q Consensus 770 --~~lv~~a~~-------------------------------~y~fdpn~~d~~G~TPLHiAA~~~---G~~dVV~lLL~ 813 (964)
+++...... .........+..|.||||+|+. . +..+++++|++
T Consensus 157 g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~-~~~~~~~~~~~~Ll~ 235 (351)
T 3utm_A 157 GKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVA-SLHPKRKQVAELLLR 235 (351)
T ss_dssp SCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHH-CCSTTHHHHHHHHHH
T ss_pred CCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHH-HhCccHHHHHHHHHH
Confidence 111000000 0000112345689999999999 7 55899999999
Q ss_pred CCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 814 DPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 814 ~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
+ |+++|.+|..|.||||+|+.+|+.+++++|.+++++..
T Consensus 236 ~------g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n 274 (351)
T 3utm_A 236 K------GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMN 274 (351)
T ss_dssp T------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred c------CCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 9 99999999999999999999999999999999887543
|
| >2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.4e-19 Score=173.82 Aligned_cols=126 Identities=17% Similarity=0.046 Sum_probs=114.1
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++||+|+..|+.++++.|++...+.+. .+..|.||||+|++.|+.++|++|++. |+
T Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~---------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 92 (192)
T 2rfm_A 35 NRTPLMVACMLGMENAIDKLVENFDKLED---------KDIEGSTALIWAVKNNRLGIAEKLLSK-------GS------ 92 (192)
T ss_dssp CCCHHHHHHHHTCGGGHHHHHHHHCCTTC---------CCTTSCCHHHHHHHTTCHHHHHHHHHH-------TC------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcccccc---------ccccCccHHHHHHHcCCHHHHHHHHHC-------CC------
Confidence 47899999999999999999997543211 244588999999999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
+++..|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.
T Consensus 93 -----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 154 (192)
T 2rfm_A 93 -----------NVNTKDFSGKTPLMWSII-FGYSEMSYFLLEH------GANVNDRNLEGETPLIVASKYGRSEIVKKLL 154 (192)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHT------TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred -----------CCCCCCCCCCcHHHHHHH-cCCHHHHHHHHHC------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 789999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcC
Q 002122 852 KKINKR 857 (964)
Q Consensus 852 ~k~ak~ 857 (964)
+++++.
T Consensus 155 ~~ga~~ 160 (192)
T 2rfm_A 155 ELGADI 160 (192)
T ss_dssp HTTCCT
T ss_pred HCCCCC
Confidence 987654
|
| >3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A | Back alignment and structure |
|---|
Probab=99.78 E-value=9.3e-19 Score=168.57 Aligned_cols=125 Identities=16% Similarity=0.156 Sum_probs=112.8
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++||+|+..|+.++++.||+...+ .. ..+..|.||||+|++.|+.++|++|++. |+
T Consensus 4 ~t~L~~A~~~g~~~~v~~ll~~~~~----~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------- 60 (167)
T 3v31_A 4 SLSVHQLAAQGEMLYLATRIEQENV----IN-----HTDEEGFTPLMWAAAHGQIAVVEFLLQN-------GA------- 60 (167)
T ss_dssp CCCHHHHHHTTCHHHHHHHHHHSSC----TT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred cchHHHHHHCCCHHHHHHHHHcCCC----cC-----CCCCCCCCHHHHHHHCCCHHHHHHHHHc-------CC-------
Confidence 5799999999999999999986432 11 1245688999999999999999999999 77
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
+++..+..|.||||+|+. .|+.+++++|+++ +++++.+|..|.||||+|+..|+.+++++|.+
T Consensus 61 ----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 123 (167)
T 3v31_A 61 ----------DPQLLGKGRESALSLACS-KGYTDIVKMLLDC------GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLE 123 (167)
T ss_dssp ----------CTTCCCTTCCCHHHHHHH-HTCHHHHHHHHHH------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ----------CCCCcCCCCCcHHHHHHH-cCCHHHHHHHHHC------CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 789999999999999999 9999999999999 99999999999999999999999999999999
Q ss_pred hhhcC
Q 002122 853 KINKR 857 (964)
Q Consensus 853 k~ak~ 857 (964)
++++.
T Consensus 124 ~g~~~ 128 (167)
T 3v31_A 124 SGADP 128 (167)
T ss_dssp TTCCT
T ss_pred cCCCC
Confidence 87654
|
| >1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B | Back alignment and structure |
|---|
Probab=99.78 E-value=2.5e-19 Score=184.36 Aligned_cols=159 Identities=17% Similarity=0.075 Sum_probs=114.0
Q ss_pred cCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCC
Q 002122 648 FGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHP 726 (964)
Q Consensus 648 ~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~ 726 (964)
.|.+++|.++ .+....+..++.++..... . ....++||+|+..|+.++|+.||+...+.+
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~-----------~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~------- 64 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKF-----------N-PLPLALLLDSSLEGEFDLVQRIIYEVDDPS------- 64 (239)
T ss_dssp ---------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCC-------
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCccc-----------C-chhhHHHHHHHHcCCHHHHHHHHHcCCCCC-------
Confidence 4677787777 4666667777776632111 0 123679999999999999999998654321
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHH
Q 002122 727 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 806 (964)
Q Consensus 727 ~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~d 806 (964)
..+..|.||||+||..|+.++|++||++ |+ ++|.+|..|.||||+||. .|+.+
T Consensus 65 --~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga-----------------~~~~~d~~g~tpL~~A~~-~~~~~ 117 (239)
T 1ycs_B 65 --LPNDEGITALHNAVCAGHTEIVKFLVQF-------GV-----------------NVNAADSDGWTPLHCAAS-CNNVQ 117 (239)
T ss_dssp --CCCTTSCCHHHHHHHHTCHHHHHHHHHH-------TC-----------------CTTCCCTTCCCHHHHHHH-TTCHH
T ss_pred --CcCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCccCCCCCCHHHHHHH-cCCHH
Confidence 1245689999999999999999999999 77 899999999999999999 99999
Q ss_pred HHHHhhcCCCCCccccccccCCCCCC-CHHHHH--HHcCCHHHHHHHHHhhhcCC
Q 002122 807 VLDALTDDPGMVGIEAWKNARDSSGS-TPEDYA--RLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 807 VV~lLL~~p~~vg~gAdinarD~~G~-TPLh~A--~~rGh~svv~LL~~k~ak~~ 858 (964)
+|++|+++ |++++.+|..|. ||||+| +..||.+++++|..++++..
T Consensus 118 ~v~~Ll~~------ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~ 166 (239)
T 1ycs_B 118 VCKFLVES------GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMG 166 (239)
T ss_dssp HHHHHHHT------TCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTT
T ss_pred HHHHHHHc------CCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccc
Confidence 99999999 999999998887 999999 78899999999999988754
|
| >1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A | Back alignment and structure |
|---|
Probab=99.78 E-value=4.1e-19 Score=169.50 Aligned_cols=125 Identities=20% Similarity=0.157 Sum_probs=112.1
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
.+.++|+.|+..|+.++++.||+..++.+ ..+..|.||||+|+. |+.++|++|++. |+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~---------~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-------g~----- 61 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVN---------AQNGFGRTALQVMKL-GNPEIARRLLLR-------GA----- 61 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTT---------CCCTTSCCHHHHCCS-SCHHHHHHHHHT-------TC-----
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCcc---------ccCccCccHHHHHHc-CcHHHHHHHHHc-------CC-----
Confidence 35789999999999999999998543211 124568899999999 999999999999 77
Q ss_pred ccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 002122 771 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 850 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL 850 (964)
++|..+..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|
T Consensus 62 ------------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 122 (162)
T 1ihb_A 62 ------------NPDLKDRTGFAVIHDAAR-AGFLDTLQTLLEF------QADVNIEDNEGNLPLHLAAKEGHLRVVEFL 122 (162)
T ss_dssp ------------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ------------CCCCCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 889999999999999999 9999999999999 999999999999999999999999999999
Q ss_pred HHhhhc
Q 002122 851 QKKINK 856 (964)
Q Consensus 851 ~~k~ak 856 (964)
.+++++
T Consensus 123 l~~g~~ 128 (162)
T 1ihb_A 123 VKHTAS 128 (162)
T ss_dssp HHHSCC
T ss_pred HHccCC
Confidence 998765
|
| >3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=5.5e-19 Score=181.60 Aligned_cols=134 Identities=19% Similarity=0.144 Sum_probs=112.0
Q ss_pred cchHHHHHH---HcCchHHHHHHhhhhccCccc---CCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCcccccc
Q 002122 692 FKWLIEFSM---DHEWCAVVKKLLHILLDGTVS---LGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRL 765 (964)
Q Consensus 692 ~k~lL~fAv---e~g~~aVVk~LL~~l~d~~vd---~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa 765 (964)
..++||+|+ ..|+.++|++||+.+++.... .+. .....+..|.||||+||..|+.++|++||++ |+
T Consensus 46 g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga 117 (260)
T 3jxi_A 46 GKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINS-PFRDVYYRGQTALHIAIERRCKHYVELLVEK-------GA 117 (260)
T ss_dssp CCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTC-CBCCSSEESBCHHHHHHHTTCHHHHHHHHHT-------TC
T ss_pred CCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcc-cccccccCCCCHHHHHHHcCCHHHHHHHHhC-------CC
Confidence 578999999 789999999999987542210 000 0011234688999999999999999999999 76
Q ss_pred CccccccccccccccccCCCcCC--------------CCCChHHHHHHhhCCCHHHHHHhhc---CCCCCccccccccCC
Q 002122 766 GSENKALVDGVHKGFLFRPDVIG--------------PAGLTPIHIAAGKDGSEDVLDALTD---DPGMVGIEAWKNARD 828 (964)
Q Consensus 766 ~~~~~~lv~~a~~~y~fdpn~~d--------------~~G~TPLHiAA~~~G~~dVV~lLL~---~p~~vg~gAdinarD 828 (964)
++|..+ ..|.||||+||. .|+.++|++|++ + |++++.+|
T Consensus 118 -----------------~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~-~g~~~~v~~Ll~~~~~------ga~~~~~d 173 (260)
T 3jxi_A 118 -----------------DVHAQARGRFFQPKDEGGYFYFGELPLSLAAC-TNQPHIVHYLTENGHK------QADLRRQD 173 (260)
T ss_dssp -----------------CTTCCCEECCCSSSCCCCSCCSCSSHHHHHHH-TTCHHHHHHHHHCSSC------CCCTTCCC
T ss_pred -----------------CcCccccccccCcccccccccCCCCHHHHHHH-cCCHHHHHHHHhcccc------CCCCcccC
Confidence 566665 689999999999 999999999999 7 99999999
Q ss_pred CCCCCHHHHHHHcCC---------HHHHHHHHHhhhcC
Q 002122 829 SSGSTPEDYARLRGH---------YSYIHLVQKKINKR 857 (964)
Q Consensus 829 ~~G~TPLh~A~~rGh---------~svv~LL~~k~ak~ 857 (964)
..|.||||+|+..|+ .+++++|.+++++.
T Consensus 174 ~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~ 211 (260)
T 3jxi_A 174 SRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKL 211 (260)
T ss_dssp TTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCccc
Confidence 999999999999888 79999999998865
|
| >2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.78 E-value=2e-18 Score=189.46 Aligned_cols=186 Identities=11% Similarity=0.055 Sum_probs=144.4
Q ss_pred HHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHh
Q 002122 634 SALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLL 712 (964)
Q Consensus 634 ~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL 712 (964)
.+++.+++....+..|.+++|.+| -+.+..+.+|++++......+ ....++||+|+..|+.++|++||
T Consensus 151 ~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~-----------~~g~t~L~~A~~~g~~~~v~~Ll 219 (373)
T 2fo1_E 151 ECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYN-----------KSERSALHQAAANRDFGMMVYML 219 (373)
T ss_dssp HHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC-----------TTCCCHHHHHHHTTCHHHHHHHT
T ss_pred HHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccC-----------CCCCCHHHHHHHCCCHHHHHHHH
Confidence 345677766655678999999999 588888999998875332222 23478999999999999999999
Q ss_pred hhhccCcccCCCCCchhhccCCCcHHHHHHHcC---CHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCC
Q 002122 713 HILLDGTVSLGEHPSLDLALTELGLLHRAVRKN---SRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGP 789 (964)
Q Consensus 713 ~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g---~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~ 789 (964)
+..... .+.. ..+..|.||||+|+..+ +.++|++|+++ |+.... ......+..+.
T Consensus 220 ~~~~~~-~~~~-----~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~-------g~~~~~---------~~~~~~~~~d~ 277 (373)
T 2fo1_E 220 NSTKLK-GDIE-----ELDRNGMTALMIVAHNEGRDQVASAKLLVEK-------GAKVDY---------DGAARKDSEKY 277 (373)
T ss_dssp TSHHHH-HTTS-----CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHH-------TCCSSC---------CSGGGTSSSSC
T ss_pred hcCccc-cChh-----hcCCCCCCHHHHHHHhCCcchHHHHHHHHHC-------CCCccc---------ccccccCcccc
Confidence 854100 1111 12456899999999998 89999999999 551100 00012345788
Q ss_pred CCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 790 AGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 790 ~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
.|.||||+||. .|+.++|++|+++. ++++|.+|..|.||||+|+.+|+.+++++|.+++++..
T Consensus 278 ~g~t~Lh~A~~-~g~~~~v~~Ll~~~-----~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~ 340 (373)
T 2fo1_E 278 KGRTALHYAAQ-VSNMPIVKYLVGEK-----GSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVE 340 (373)
T ss_dssp CCCCTHHHHHS-SCCHHHHHHHHHHS-----CCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS
T ss_pred cCCCHHHHHHH-hCCHHHHHHHHHhc-----CCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 99999999999 99999999999871 49999999999999999999999999999999887643
|
| >3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-19 Score=169.34 Aligned_cols=126 Identities=25% Similarity=0.220 Sum_probs=108.3
Q ss_pred cccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccc
Q 002122 690 RRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSEN 769 (964)
Q Consensus 690 ~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~ 769 (964)
....++||+|+..|+.++++.||+..++.+ ..+..|.||||+|+..|+.+++++|+++ |+
T Consensus 8 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~---- 67 (137)
T 3c5r_A 8 HRGETLLHIASIKGDIPSVEYLLQNGSDPN---------VKDHAGWTPLHEACNHGHLKVVELLLQH-------KA---- 67 (137)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCSC---------CCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC----
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------cCCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC----
Confidence 345789999999999999999999654321 1245689999999999999999999999 77
Q ss_pred cccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHH
Q 002122 770 KALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHL 849 (964)
Q Consensus 770 ~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~L 849 (964)
+++.+|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..++.+++++
T Consensus 68 -------------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~l~~ 127 (137)
T 3c5r_A 68 -------------LVNTTGYQNDSPLHDAAK-NGHVDIVKLLLSY------GASRNAVNIFGLRPVDYTDDESMKSLLLL 127 (137)
T ss_dssp -------------CTTCCCGGGCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCGGGGCCCHHHHHHHSC
T ss_pred -------------cccCcCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCCCCCCCCHHHHHhhccHHHHHhh
Confidence 788999999999999999 9999999999999 99999999999999999999999888888
Q ss_pred HHHhhh
Q 002122 850 VQKKIN 855 (964)
Q Consensus 850 L~~k~a 855 (964)
|.+...
T Consensus 128 l~~~~~ 133 (137)
T 3c5r_A 128 PEKNES 133 (137)
T ss_dssp C-----
T ss_pred cccccc
Confidence 776543
|
| >4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=5.2e-18 Score=181.51 Aligned_cols=177 Identities=15% Similarity=0.046 Sum_probs=130.1
Q ss_pred hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhh-hccCcc-cC
Q 002122 646 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHI-LLDGTV-SL 722 (964)
Q Consensus 646 ~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~-l~d~~v-d~ 722 (964)
+..|.+++|.++ .+.+..+.+++.++........... ..........+|||+|+.+|+.++|++||+. +++.+. +.
T Consensus 122 d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~-~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~ 200 (337)
T 4g8k_A 122 DFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKE-DQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDN 200 (337)
T ss_dssp CTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC------CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCT
T ss_pred ccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhcccc-ccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCC
Confidence 456788999988 4777778888887754332221110 0112223457899999999999999999964 333221 00
Q ss_pred -CC-----------C---------------CchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccc
Q 002122 723 -GE-----------H---------------PSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDG 775 (964)
Q Consensus 723 -g~-----------~---------------~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~ 775 (964)
|. . +....+..|.||||+|++.|+.++|++|+... |+
T Consensus 201 ~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~------~~---------- 264 (337)
T 4g8k_A 201 MGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE------HI---------- 264 (337)
T ss_dssp TSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTST------TC----------
T ss_pred CCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhc------CC----------
Confidence 00 0 00011345779999999999999999888762 44
Q ss_pred cccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 002122 776 VHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKIN 855 (964)
Q Consensus 776 a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~a 855 (964)
++|.+|..|+||||+|+. .|+.+||++|+++ ||++|.+ ||||+|+.+||.++|++|+++++
T Consensus 265 -------~vn~~d~~G~TpL~~A~~-~g~~~iv~~Ll~~------GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~GA 325 (337)
T 4g8k_A 265 -------EINDTDSDGKTALLLAVE-LKLKKIAELLCKR------GASTDCG-----DLVMTARRNYDHSLVKVLLSHGA 325 (337)
T ss_dssp -------CTTCBCTTSCBHHHHHHH-TTCHHHHHHHHTT------SCSSTTC-----CHHHHHHHTTCHHHHHHHHHTTC
T ss_pred -------cccCcCCCCCCHHHHHHH-cCCHHHHHHHHHC------CCCCCCC-----CHHHHHHHcCCHHHHHHHHHCcC
Confidence 889999999999999999 9999999999999 9998765 59999999999999999999998
Q ss_pred cCC
Q 002122 856 KRP 858 (964)
Q Consensus 856 k~~ 858 (964)
+..
T Consensus 326 ~~d 328 (337)
T 4g8k_A 326 KED 328 (337)
T ss_dssp CC-
T ss_pred CCC
Confidence 754
|
| >1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.6e-18 Score=152.88 Aligned_cols=92 Identities=30% Similarity=0.373 Sum_probs=87.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhc
Q 002122 734 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 813 (964)
Q Consensus 734 G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~ 813 (964)
|+||||+|++.|+.++|++|++. |+ ++|.+|..|.||||+|+. .|+.+++++|++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~n~~d~~g~t~L~~A~~-~~~~~~v~~Ll~ 56 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEA-------GA-----------------DVNAKDKNGRTPLHLAAR-NGHLEVVKLLLE 56 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCcccCCCCCCHHHHHHH-cCCHHHHHHHHH
Confidence 78999999999999999999999 77 889999999999999999 999999999999
Q ss_pred CCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhc
Q 002122 814 DPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINK 856 (964)
Q Consensus 814 ~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak 856 (964)
+ |++++.+|..|.||||+|+..|+.+++++|.+++++
T Consensus 57 ~------ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 57 A------GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp T------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred c------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9 999999999999999999999999999999998763
|
| >3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A | Back alignment and structure |
|---|
Probab=99.77 E-value=2e-18 Score=159.17 Aligned_cols=116 Identities=16% Similarity=0.067 Sum_probs=101.2
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++||+|+..|+.++++.|++...+.+ ..+..|.||||+|+..++.++|++|+++ |+
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~~~~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 64 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVAKGEDVN---------RTLEGGRKPLHYAADCGQLEILEFLLLK-------GA------ 64 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTT---------SCCTTSSCHHHHHHHTTCHHHHHHHHTT-------TC------
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCcC---------ccCCCCCcHHHHHHHcCCHHHHHHHHHc-------CC------
Confidence 4689999999999999999999654311 1345689999999999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 850 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL 850 (964)
++|.+|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|. +..+.++|
T Consensus 65 -----------~~~~~d~~g~tpL~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~---~~~~~~ll 122 (123)
T 3aaa_C 65 -----------DINAPDKHHITPLLSAVY-EGHVSCVKLLLSK------GADKTVKGPDGLTAFEATD---NQAIKALL 122 (123)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHCC---CHHHHHHH
T ss_pred -----------CCCcCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHhC---CHHHHHHh
Confidence 889999999999999999 9999999999999 9999999999999999994 44555544
|
| >1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B | Back alignment and structure |
|---|
Probab=99.77 E-value=2.3e-18 Score=163.63 Aligned_cols=122 Identities=24% Similarity=0.225 Sum_probs=109.1
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++|++|+..|+.++++.||+. . ..+.. ..+..|.||||+ +..|+.++|++|+++ |+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~--~~~~~-----~~~~~g~t~L~~-~~~~~~~~v~~Ll~~-------g~------ 59 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-E--LVHPD-----ALNRFGKTALQV-MMFGSTAIALELLKQ-------GA------ 59 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-T--CCCTT-----CCCTTSCCHHHH-SCTTCHHHHHHHHHT-------TC------
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-h--CcCcc-----ccCCCCCcHHHH-HHcCCHHHHHHHHHC-------CC------
Confidence 46799999999999999999985 2 11111 134568999999 999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
++|..|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.
T Consensus 60 -----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 121 (156)
T 1bd8_A 60 -----------SPNVQDTSGTSPVHDAAR-TGFLDTLKVLVEH------GADVNVPDGTGALPIHLAVQEGHTAVVSFLA 121 (156)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred -----------CCCCcCCCCCCHHHHHHH-cCcHHHHHHHHHc------CCCCCCcCCCCCcHHHHHHHhChHHHHHHHH
Confidence 889999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred Hh
Q 002122 852 KK 853 (964)
Q Consensus 852 ~k 853 (964)
++
T Consensus 122 ~~ 123 (156)
T 1bd8_A 122 AE 123 (156)
T ss_dssp TT
T ss_pred hc
Confidence 87
|
| >1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 | Back alignment and structure |
|---|
Probab=99.76 E-value=6e-18 Score=180.15 Aligned_cols=139 Identities=22% Similarity=0.165 Sum_probs=117.7
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHc---CCHHHHHHHhccCCCccccccCccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRK---NSRPLVDLLLRFVPLEVSDRLGSEN 769 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~---g~~e~VelLL~~~p~~~~dGa~~~~ 769 (964)
-..|+.|+..+....++.|++.+++..... .....+..|.||||+||+. ++.++|++||++ |+
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~---~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~-------ga---- 196 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKI---PLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN-------SG---- 196 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBC---CCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH-------CS----
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhc---cccccccCCCCcchHHHHhcccchHHHHHHHHHC-------CC----
Confidence 358999999999999999998655422110 0011245689999999999 899999999999 88
Q ss_pred cccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHH
Q 002122 770 KALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHL 849 (964)
Q Consensus 770 ~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~L 849 (964)
++|.+|..|.||||+||. .|+.++|++|+++ ||+++.+|..|.||||+|+..||.+++++
T Consensus 197 -------------~in~~d~~g~TpLh~A~~-~g~~~~v~~Ll~~------gad~~~~d~~g~tpL~~A~~~~~~~~v~~ 256 (278)
T 1dcq_A 197 -------------NLDKQTGKGSTALHYCCL-TDNAECLKLLLRG------KASIEIANESGETPLDIAKRLKHEHCEEL 256 (278)
T ss_dssp -------------CTTCCCTTCCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred -------------CccccCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCccCCCCCHHHHHHHcCCHHHHHH
Confidence 899999999999999999 9999999999999 99999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCceee
Q 002122 850 VQKKINKRPNGGHVVVD 866 (964)
Q Consensus 850 L~~k~ak~~~~~~v~v~ 866 (964)
|.++++... ..+..+.
T Consensus 257 Ll~~ga~~~-~~~~~v~ 272 (278)
T 1dcq_A 257 LTQALSGRF-NSHVHVE 272 (278)
T ss_dssp HHHHHTTCC-CSSCCCC
T ss_pred HHHcCCCCC-Ccceeee
Confidence 999998765 4444443
|
| >3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.2e-18 Score=181.17 Aligned_cols=158 Identities=16% Similarity=0.073 Sum_probs=134.3
Q ss_pred hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC
Q 002122 646 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE 724 (964)
Q Consensus 646 ~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~ 724 (964)
+..|.+++|.+| .+.+..+.+|+.++...... ...+|||+|+..|+.++|++||+.+++.+.
T Consensus 28 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-------------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~---- 90 (285)
T 3kea_A 28 DVHGHSASYYAIADNNVRLVCTLLNAGALKNLL-------------ENEFPLHQAATLEDTKIVKILLFSGLDDSQ---- 90 (285)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC-------------TTCCHHHHHTTSSSCHHHHHHHHTTCCTTC----
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC-------------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC----
Confidence 567899999999 58888899999887432211 147899999999999999999996543211
Q ss_pred CCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCC-ChHHHHHHhhCC
Q 002122 725 HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAG-LTPIHIAAGKDG 803 (964)
Q Consensus 725 ~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G-~TPLHiAA~~~G 803 (964)
.+..|.||||+|+..|+.++|++||++ |+ +++..+..| .||||+|+. .|
T Consensus 91 -----~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga-----------------~~~~~~~~g~~t~L~~A~~-~~ 140 (285)
T 3kea_A 91 -----FDDKGNTALYYAVDSGNMQTVKLFVKK-------NW-----------------RLMFYGKTGWKTSFYHAVM-LN 140 (285)
T ss_dssp -----CCTTSCCHHHHHHHTTCHHHHHHHHHH-------CG-----------------GGGGCSSSGGGSHHHHHHH-TT
T ss_pred -----cCCCCCcHHHHHHHcCCHHHHHHHHhc-------CC-----------------CCCccCCCCCCCHHHHHHH-cC
Confidence 245689999999999999999999999 77 889999999 899999999 99
Q ss_pred CHHHHHHhhcCCCCCccccccccCCC-CCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 804 SEDVLDALTDDPGMVGIEAWKNARDS-SGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 804 ~~dVV~lLL~~p~~vg~gAdinarD~-~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
+.+++++|+++ +++. .|. .|.||||+|+..|+.+++++|.+++++..
T Consensus 141 ~~~~v~~Ll~~------g~~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n 188 (285)
T 3kea_A 141 DVSIVSYFLSE------IPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTSTN 188 (285)
T ss_dssp CHHHHHHHHTT------SCTT--CCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHhC------CCcc--ccccCCccHHHHHHHcChHHHHHHHHHcCCCCC
Confidence 99999999999 7766 343 89999999999999999999999987654
|
| >2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.9e-18 Score=176.95 Aligned_cols=127 Identities=19% Similarity=0.100 Sum_probs=114.5
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++||+|+..|+.++|+.||+.+++.+. .+..|.||||+||..|+.++|++||++ |+
T Consensus 21 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---------~d~~g~tpLh~A~~~g~~~~v~~Ll~~-------ga------ 78 (229)
T 2vge_A 21 PLVLLLDAALTGELEVVQQAVKEMNDPSQ---------PNEEGITALHNAICGANYSIVDFLITA-------GA------ 78 (229)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHSSCTTC---------CCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred hhHHHHHHHHcCCHHHHHHHHhcCCCCCC---------CCCCCCCHHHHHHHcCCHHHHHHHHHC-------CC------
Confidence 35789999999999999999996543211 345689999999999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCC-CCCCCHHHHH--HHcCCHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARD-SSGSTPEDYA--RLRGHYSYIH 848 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD-~~G~TPLh~A--~~rGh~svv~ 848 (964)
++|..|..|.||||+|+. .|+.++|++|+++ |++++.+| ..|.||||+| +..|+.++++
T Consensus 79 -----------~~n~~d~~g~tpLh~A~~-~g~~~~v~~Ll~~------ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~ 140 (229)
T 2vge_A 79 -----------NVNSPDSHGWTPLHCAAS-CNDTVICMALVQH------GAAIFATTLSDGATAFEKCDPYREGYADCAT 140 (229)
T ss_dssp -----------CTTCCCTTCCCHHHHHHH-TTCHHHHHHHHTT------TCCTTCCCSSTTCCTGGGCCTTSTTHHHHHH
T ss_pred -----------CCCCCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCcccccCCCCCCHHHHHHHHhcChHHHHH
Confidence 899999999999999999 9999999999999 99999997 6999999999 9999999999
Q ss_pred HHHHhhhcCC
Q 002122 849 LVQKKINKRP 858 (964)
Q Consensus 849 LL~~k~ak~~ 858 (964)
+|.+++++..
T Consensus 141 ~Ll~~ga~~~ 150 (229)
T 2vge_A 141 YLADVEQSMG 150 (229)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHcCCCcc
Confidence 9999988754
|
| >1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.74 E-value=6.1e-18 Score=182.63 Aligned_cols=184 Identities=15% Similarity=-0.016 Sum_probs=132.8
Q ss_pred hHHHHHHHHhhhcCcchhhh-----------------hcCccccHHHHHHHHHHHhhhhcc-cccccccCCCCCCCCCcC
Q 002122 627 SEIRMLESALEFNRTDADVE-----------------RFGKIDTKNQAMDFIHEIGWLFHR-SQSKSRLGHLDPNTDLFP 688 (964)
Q Consensus 627 sEI~~LE~~le~~a~~~~~~-----------------e~g~~~~h~~al~fL~EIGWLLqr-~~~~~~~~~~d~~l~l~q 688 (964)
..+..++.+++.+....... .......|.++.+.+.++.-+|-. +..... ..
T Consensus 58 g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~----------~~ 127 (327)
T 1sw6_A 58 EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNI----------PV 127 (327)
T ss_dssp HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTSCCCSCS----------CC
T ss_pred chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCCccc----------cc
Confidence 78888898888776543210 001111244556666666644433 321111 01
Q ss_pred ccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCC---HHHHHHHhccCCCcccccc
Q 002122 689 LRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNS---RPLVDLLLRFVPLEVSDRL 765 (964)
Q Consensus 689 l~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~---~e~VelLL~~~p~~~~dGa 765 (964)
-....+|||+|+..|+.++|++||+.+++.+ ..+..|.||||+|+..|+ .++++.||++ +.
T Consensus 128 d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n---------~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~-------~~ 191 (327)
T 1sw6_A 128 DEHGNTPLHWLTSIANLELVKHLVKHGSNRL---------YGDNMGESCLVKAVKSVNNYDSGTFEALLDY-------LY 191 (327)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---------BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHH-------HG
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHhcccccHHHHHHHHHh-------hh
Confidence 2245789999999999999999999754322 135569999999999998 6888888888 42
Q ss_pred CccccccccccccccccCCCcCCCCCChHHHHHHhh---CCCHHHHHHhhcCCCCCcccc--------------------
Q 002122 766 GSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGK---DGSEDVLDALTDDPGMVGIEA-------------------- 822 (964)
Q Consensus 766 ~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~---~G~~dVV~lLL~~p~~vg~gA-------------------- 822 (964)
. ++|.+|..|+||||+|+.. .|+.+++++|++. ++
T Consensus 192 ~----------------~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~------~~~~~~~~~~~~i~~~~~~~g~ 249 (327)
T 1sw6_A 192 P----------------CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDI------LMGWIVKKQNRPIQSGTNEKES 249 (327)
T ss_dssp G----------------GGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHH------HHHHHHHGGGCCEEEC------
T ss_pred c----------------cccCCCCCCCCHHHHHHHHccccccHHHHHHHHHH------HHHHHhcccchHHHhhhhcccC
Confidence 1 6788999999999999963 6899999999876 32
Q ss_pred -------------------------ccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 823 -------------------------WKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 823 -------------------------dinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
++|.+|..|.||||+|+.+||.+++++|.+++++..
T Consensus 250 ~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~ 310 (327)
T 1sw6_A 250 KPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPF 310 (327)
T ss_dssp ----------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTT
T ss_pred CcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 588999999999999999999999999999988653
|
| >3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A | Back alignment and structure |
|---|
Probab=99.74 E-value=4.4e-18 Score=167.89 Aligned_cols=110 Identities=23% Similarity=0.139 Sum_probs=97.8
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
...++||+|+..|+.++++.||+ ..+ .+. .+..|.||||+|+..|+.++|++||++ |+
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~----~~~-----~d~~g~t~L~~A~~~~~~~~v~~Ll~~-------ga----- 100 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DRD----VDA-----VDENGRTALLFVAGLGSDKCVRLLAEA-------GA----- 100 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TSC----TTC-----CCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC-----
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCC----CCC-----cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----
Confidence 34789999999999999999998 332 111 245689999999999999999999999 77
Q ss_pred ccccccccccccCCCcCC-CCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHc
Q 002122 771 ALVDGVHKGFLFRPDVIG-PAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLR 841 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~~d-~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~r 841 (964)
++|..+ ..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..
T Consensus 101 ------------~~~~~~~~~g~tpL~~A~~-~~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 101 ------------DLDHRDMRGGLTALHMAAG-YVRPEVVEALVEL------GADIEVEDERGLTALELAREI 153 (183)
T ss_dssp ------------CTTCCCSSSSCCHHHHHHH-TTCHHHHHHHHHH------TCCTTCCCTTSCCHHHHHHHH
T ss_pred ------------CCCcCCCCCCCCHHHHHHh-cCcHHHHHHHHHc------CCCCcCCCCCCCCHHHHHHHh
Confidence 788888 899999999999 9999999999999 999999999999999999876
|
| >3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.5e-18 Score=173.01 Aligned_cols=127 Identities=8% Similarity=-0.063 Sum_probs=110.1
Q ss_pred cchHHHHHHHcCch----HHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCC------HHHHHHHhccCCCcc
Q 002122 692 FKWLIEFSMDHEWC----AVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNS------RPLVDLLLRFVPLEV 761 (964)
Q Consensus 692 ~k~lL~fAve~g~~----aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~------~e~VelLL~~~p~~~ 761 (964)
.++|||+|+.+++. ++|++||+.+++.+. .+..|+||||+|+..++ .++|++||++
T Consensus 38 g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~---------~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~----- 103 (186)
T 3t8k_A 38 KSNILYDVLRNNNDEARYKISMFLINKGADIKS---------RTKEGTTLFFPLFQGGGNDITGTTELCKIFLEK----- 103 (186)
T ss_dssp TTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC---------CCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHT-----
T ss_pred CCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC---------CCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHC-----
Confidence 57899999999975 489999996654221 24569999999999987 6889999999
Q ss_pred ccccCccccccccccccccccCCCcCCCCCC-hHHHHHHhhCCC-----HHHHHHhhc-CCCCCccccccccCCCCCCCH
Q 002122 762 SDRLGSENKALVDGVHKGFLFRPDVIGPAGL-TPIHIAAGKDGS-----EDVLDALTD-DPGMVGIEAWKNARDSSGSTP 834 (964)
Q Consensus 762 ~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~-TPLHiAA~~~G~-----~dVV~lLL~-~p~~vg~gAdinarD~~G~TP 834 (964)
|+ ++|.+|..|. ||||+|+. .+. .+++++|++ + ||+++.+|..|.||
T Consensus 104 --Ga-----------------din~~d~~g~ttpLh~A~~-~~~~~~~~~~iv~~Ll~~~------gad~~~~d~~G~Tp 157 (186)
T 3t8k_A 104 --GA-----------------DITALYKPYKIVVFKNIFN-YFVDENEMIPLYKLIFSQS------GLQLLIKDKWGLTA 157 (186)
T ss_dssp --TC-----------------CSSSCBGGGTBCTTGGGGG-CCSCHHHHHHHHHHHHTST------TCCTTCCCTTSCCH
T ss_pred --CC-----------------CCCccCCCcCchHHHHHHH-cCCChhhHHHHHHHHHHhc------CCCCcccCCCCCCH
Confidence 88 9999999999 99999998 554 469999999 8 99999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 835 EDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 835 Lh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
||+|+..|+.+++++|...+.+..
T Consensus 158 L~~A~~~~~~~~v~~L~~~~~~~~ 181 (186)
T 3t8k_A 158 LEFVKRCQKPIALKMMEDYIKKYN 181 (186)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHh
Confidence 999999999999999998776543
|
| >4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.4e-18 Score=177.40 Aligned_cols=161 Identities=19% Similarity=0.112 Sum_probs=128.2
Q ss_pred CccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCc
Q 002122 649 GKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS 727 (964)
Q Consensus 649 g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~ 727 (964)
.+..+|.++ .+.+..+..++.+.... ..+.. -....+|||+|+..|+.++|+.||+.+.. +.
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~-~~n~~--------d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~---~~----- 138 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDY-VVNIA--------DSNGNTALHYSVSHANFPVVQQLLDSGVC---KV----- 138 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHH-HHTCC--------CTTSCCHHHHHHHTTCHHHHHHHHHTSCC---CT-----
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhh-cCcCC--------CCCCCCHHHHHHHCCCHHHHHHHHHCCCC---cC-----
Confidence 455667776 47777777776553210 01111 12357899999999999999999996431 11
Q ss_pred hhhccCCCcHHHHHH-----HcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhC
Q 002122 728 LDLALTELGLLHRAV-----RKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKD 802 (964)
Q Consensus 728 le~~l~G~TpLH~AV-----r~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~ 802 (964)
...+..|.||||+|+ ..++.+++++|++. |+ .++..+..|.||||+||. .
T Consensus 139 ~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~tpLh~A~~-~ 193 (276)
T 4hbd_A 139 DKQNRAGYSPIMLTALATLKTQDDIETVLQLFRL-------GN-----------------INAKASQAGQTALMLAVS-H 193 (276)
T ss_dssp TCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHH-------SC-----------------TTCCCTTTCCCHHHHHHH-T
T ss_pred CCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHc-------CC-----------------CccccCCCCCCHHHHHHH-c
Confidence 113556899999999 77899999999999 66 677888899999999999 9
Q ss_pred CCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH-hhhcC
Q 002122 803 GSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK-KINKR 857 (964)
Q Consensus 803 G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~-k~ak~ 857 (964)
|+.++|++|+++ ||++|.+|.+|.||||+|+.+|+.+++++|.+ ++++.
T Consensus 194 g~~~~v~~Ll~~------gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~ 243 (276)
T 4hbd_A 194 GRVDVVKALLAC------EADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDI 243 (276)
T ss_dssp TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCT
T ss_pred CCHHHHHHHHhC------CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCC
Confidence 999999999999 99999999999999999999999999999998 66543
|
| >1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B | Back alignment and structure |
|---|
Probab=99.74 E-value=3.1e-18 Score=176.15 Aligned_cols=126 Identities=16% Similarity=0.062 Sum_probs=89.8
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++||.|+..+..++++.||+.+++.+. ...++||||.|++.|+.++|++||+. |+
T Consensus 5 g~t~L~~a~~~~~~~~~~~ll~~g~~~~~----------~~~~~t~L~~A~~~g~~~~v~~Ll~~-------g~------ 61 (239)
T 1ycs_B 5 GQVSLPPGKRTNLRKTGSERIAHGMRVKF----------NPLPLALLLDSSLEGEFDLVQRIIYE-------VD------ 61 (239)
T ss_dssp ------------------------------------------CHHHHHHHHHHTCHHHHHHHTST-------TS------
T ss_pred ccccCchhhhhhhHHHHHHHhccCCCccc----------CchhhHHHHHHHHcCCHHHHHHHHHc-------CC------
Confidence 46799999999999999999996554221 23478999999999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
++|..|..|.||||+||. .|+.++|++|+++ |+++|.+|..|.||||+|+..||.+++++|.
T Consensus 62 -----------~~~~~d~~g~t~L~~A~~-~g~~~~v~~Ll~~------ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll 123 (239)
T 1ycs_B 62 -----------DPSLPNDEGITALHNAVC-AGHTEIVKFLVQF------GVNVNAADSDGWTPLHCAASCNNVQVCKFLV 123 (239)
T ss_dssp -----------SCCCCCTTSCCHHHHHHH-HTCHHHHHHHHHH------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCCcCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 889999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcCC
Q 002122 852 KKINKRP 858 (964)
Q Consensus 852 ~k~ak~~ 858 (964)
+++++..
T Consensus 124 ~~ga~~~ 130 (239)
T 1ycs_B 124 ESGAAVF 130 (239)
T ss_dssp HTTCCTT
T ss_pred HcCCCcc
Confidence 9987654
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-18 Score=174.20 Aligned_cols=127 Identities=17% Similarity=0.103 Sum_probs=105.5
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++||+|+..|+.++|+.||+..++.+ ..+..|.||||+||..|+.++|++||+.. |+
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~------g~------- 131 (222)
T 3ehr_A 74 DNPLHEAAKRGNLSWLRECLDNRVGVN---------GLDKAGSTALYWACHGGHKDIVEMLFTQP------NI------- 131 (222)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHTTST------TC-------
T ss_pred ccccccccccCcHHHHHHHHhCCCCcc---------ccCCCCCCHHHHHHHcCCHHHHHHHHcCC------CC-------
Confidence 679999999999999999999654321 12456899999999999999999999872 45
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
++|..|..|.||||+|+. .|+.++|++|+++ ||+++.+|..|.||||+|+..|+.+++++|..
T Consensus 132 ----------~~~~~d~~g~tpL~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~ 194 (222)
T 3ehr_A 132 ----------ELNQQNKLGDTALHAAAW-KGYADIVQLLLAK------GARTDLRNIEKKLAFDMATNAACASLLKKKQG 194 (222)
T ss_dssp ----------CCCCCCTTSCCHHHHHHH-HTCHHHHHHHHHH------TCCSCCCCTTSCCHHHHCCSHHHHHHHC----
T ss_pred ----------CccccCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCccccCCCCCHHHHhcchhHHHHHHHHhc
Confidence 789999999999999999 9999999999999 99999999999999999999999999999988
Q ss_pred hhhcCC
Q 002122 853 KINKRP 858 (964)
Q Consensus 853 k~ak~~ 858 (964)
+++...
T Consensus 195 ~~~~~~ 200 (222)
T 3ehr_A 195 TDAVRT 200 (222)
T ss_dssp ------
T ss_pred cchhhh
Confidence 876543
|
| >3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A | Back alignment and structure |
|---|
Probab=99.73 E-value=9.3e-18 Score=173.99 Aligned_cols=124 Identities=22% Similarity=0.158 Sum_probs=109.7
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++||+|+..|+.++|+.||+ ..+ .+ ..+..|.||||+|+..|+.++|++||++ |+
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~-~~~----~~-----~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga------ 101 (244)
T 3ui2_A 45 YETPWWTAARKADEQALSQLLE-DRD----VD-----AVDENGRTALLFVAGLGSDKCVRLLAEA-------GA------ 101 (244)
T ss_dssp HHHHHHHHHTTTCHHHHHHTTT-TCC----TT-----CBCTTSCBHHHHHHHHTCHHHHHHHHHT-------TC------
T ss_pred CCCHHHHHHHcCCHHHHHHHHc-CCC----CC-----CcCCCCCCHHHHHHHCCCHHHHHHHHHc-------CC------
Confidence 4689999999999999999998 332 11 1345689999999999999999999999 77
Q ss_pred cccccccccccCCCcCC-CCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHH-----------
Q 002122 772 LVDGVHKGFLFRPDVIG-PAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYAR----------- 839 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d-~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~----------- 839 (964)
++|..+ ..|.||||+|+. .|+.++|++|+++ ||+++.+|..|.||||+|+
T Consensus 102 -----------~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~------ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~ 163 (244)
T 3ui2_A 102 -----------DLDHRDMRGGLTALHMAAG-YVRPEVVEALVEL------GADIEVEDERGLTALELAREILKTTPKGNP 163 (244)
T ss_dssp -----------CTTCCCSSSCCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHHHTTCCCSSH
T ss_pred -----------CCCcCCCCCCCCHHHHHHH-cCCHHHHHHHHHC------CCCCCCCCCCCCcHHHHHHHHHhccCCCCH
Confidence 888888 789999999999 9999999999999 9999999999999999998
Q ss_pred -----HcCCHHHHHHHHHhhhc
Q 002122 840 -----LRGHYSYIHLVQKKINK 856 (964)
Q Consensus 840 -----~rGh~svv~LL~~k~ak 856 (964)
..||.+++++|.++...
T Consensus 164 l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 164 MQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHHcChHHHHHHHHHhccc
Confidence 66899999999987543
|
| >2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.5e-17 Score=176.35 Aligned_cols=131 Identities=24% Similarity=0.183 Sum_probs=113.9
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHc---CCHHHHHHHhccCCCccccccCccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRK---NSRPLVDLLLRFVPLEVSDRLGSEN 769 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~---g~~e~VelLL~~~p~~~~dGa~~~~ 769 (964)
.++|+.|+..+..+.|+.||+...+.+... .....+..|.||||+||.. ++.++|++||++ |+
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~---~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~-------ga---- 217 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFANGQDFGQPL---PGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-------GG---- 217 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSCE---ECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHH-------SS----
T ss_pred HHHHhhhhhccCHHHHHHHHhcCCcccccC---CCcccCCCCccHHHHHHHhcccCcHHHHHHHHhc-------CC----
Confidence 457999999999999999998654422100 0001245688999999997 899999999999 87
Q ss_pred cccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHH
Q 002122 770 KALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHL 849 (964)
Q Consensus 770 ~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~L 849 (964)
++|.+|..|.||||+|+. .|+.++|++|+++ ||+++++|..|.||||+|+..|+.+++++
T Consensus 218 -------------dvn~~d~~G~TpLh~A~~-~g~~~~v~~Ll~~------gad~~~~d~~G~TpL~~A~~~~~~~iv~~ 277 (301)
T 2b0o_E 218 -------------HLDAKAADGNTALHYAAL-YNQPDCLKLLLKG------RALVGTVNEAGETALDIARKKHHKECEEL 277 (301)
T ss_dssp -------------CTTCCCTTCCCHHHHHHH-TTCHHHHHHHHHT------TCCCSCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred -------------CCCCCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 899999999999999999 9999999999999 99999999999999999999999999999
Q ss_pred HHHhhhcC
Q 002122 850 VQKKINKR 857 (964)
Q Consensus 850 L~~k~ak~ 857 (964)
|.+++++.
T Consensus 278 Ll~~ga~~ 285 (301)
T 2b0o_E 278 LEQAQAGT 285 (301)
T ss_dssp HHHHHHHT
T ss_pred HHHhcCCC
Confidence 99999874
|
| >1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.2e-17 Score=180.44 Aligned_cols=185 Identities=13% Similarity=0.079 Sum_probs=131.4
Q ss_pred HHHHhhhcCcchh-hhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCc---hH
Q 002122 632 LESALEFNRTDAD-VERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEW---CA 706 (964)
Q Consensus 632 LE~~le~~a~~~~-~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~---~a 706 (964)
++.+++.++.... .+..|.+++|.+| .+.+..+.+||+++......+ ....+|||+|+..|+ .+
T Consensus 113 ~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d-----------~~g~TpLh~A~~~g~~~~~~ 181 (327)
T 1sw6_A 113 NDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGD-----------NMGESCLVKAVKSVNNYDSG 181 (327)
T ss_dssp HHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCC-----------TTCCCHHHHHHHSSHHHHTT
T ss_pred HHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC-----------CCCCCHHHHHHHhcccccHH
Confidence 4445555665544 4678999999999 588888999999885433322 235789999999998 78
Q ss_pred HHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHH----cCCHHHHHHHhccCCCccc-------------cccC---
Q 002122 707 VVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVR----KNSRPLVDLLLRFVPLEVS-------------DRLG--- 766 (964)
Q Consensus 707 VVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr----~g~~e~VelLL~~~p~~~~-------------dGa~--- 766 (964)
+++.||+.+.. .+ ...+..|.||||+|++ .|+.++|++||+....... .|+.
T Consensus 182 ~~~~ll~~~~~-~~-------~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~ 253 (327)
T 1sw6_A 182 TFEALLDYLYP-CL-------ILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPND 253 (327)
T ss_dssp CHHHHHHHHGG-GG-------GEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------
T ss_pred HHHHHHHhhhc-cc-------cCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCccc
Confidence 88888887632 11 1235669999999999 8999999999976100000 0010
Q ss_pred ---ccccccccccccccc--cCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHc
Q 002122 767 ---SENKALVDGVHKGFL--FRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLR 841 (964)
Q Consensus 767 ---~~~~~lv~~a~~~y~--fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~r 841 (964)
...++++......++ .++|.+|..|+||||+||. .|+.++|++|+++ ||+++++|..|.||||+|+.+
T Consensus 254 ~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~-~g~~~~v~~Ll~~------Gad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 254 KNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAAR-LGNISIVDALLDY------GADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp ------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHH-HCCHHHHHHHHHT------TCCTTCCCTTSCCGGGGTCC-
T ss_pred ccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCcccCCCCCCHHHHHHhc
Confidence 011222221110000 1589999999999999999 9999999999999 999999999999999999876
Q ss_pred C
Q 002122 842 G 842 (964)
Q Consensus 842 G 842 (964)
|
T Consensus 327 g 327 (327)
T 1sw6_A 327 E 327 (327)
T ss_dssp -
T ss_pred C
Confidence 5
|
| >3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A | Back alignment and structure |
|---|
Probab=99.69 E-value=8.5e-17 Score=179.33 Aligned_cols=126 Identities=20% Similarity=0.090 Sum_probs=112.0
Q ss_pred chHHHHHHHc-CchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 693 KWLIEFSMDH-EWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 693 k~lL~fAve~-g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
.++||.|+.. ++.++|+.||+.+++.+.. . .+..|.||||+||..|+.++|++||++ |+
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~----~---~~~~g~TpLh~Aa~~g~~~iv~~LL~~-------Ga------ 259 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGADVNWV----N---GGQDNATPLIQATAANSLLACEFLLQN-------GA------ 259 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCCTTCC----C---TTTTCCCHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCCCCcc----c---cccCCCCHHHHHHHCCCHHHHHHHHHc-------CC------
Confidence 4599999999 9999999999966543211 1 125688999999999999999999999 87
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
++|..|..|+||||+|+. .|+.++|++|+++ ||+++++|.+|.||||+|+..||.+++++|.
T Consensus 260 -----------dvn~~d~~G~TpLh~A~~-~g~~~~v~~LL~~------Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl 321 (368)
T 3jue_A 260 -----------NVNQADSAGRGPLHHATI-LGHTGLACLFLKR------GADLGARDSEGRDPLTIAMETANADIVTLLR 321 (368)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCCCCCCCCCHHHHHHH-cCcHHHHHHHHHC------cCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 899999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred Hhhhc
Q 002122 852 KKINK 856 (964)
Q Consensus 852 ~k~ak 856 (964)
..+.+
T Consensus 322 ~~~~~ 326 (368)
T 3jue_A 322 LAKMR 326 (368)
T ss_dssp HHHC-
T ss_pred HcCCC
Confidence 87643
|
| >3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.1e-16 Score=147.90 Aligned_cols=97 Identities=29% Similarity=0.336 Sum_probs=91.2
Q ss_pred hccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHH
Q 002122 730 LALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLD 809 (964)
Q Consensus 730 ~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~ 809 (964)
.+..|.||||+|+..|+.++|++||+. |+ ++|..|..|.||||+|+. .|+.++++
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~~~ 60 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQN-------GS-----------------DPNVKDHAGWTPLHEACN-HGHLKVVE 60 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CSCCCCTTSCCHHHHHHH-TTCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCcCCCCCCCHHHHHHH-cCCHHHHH
Confidence 356689999999999999999999999 77 789999999999999999 99999999
Q ss_pred HhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 810 ALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 810 lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
+|+++ +++++.+|..|.||||+|+..|+.+++++|.+++++.
T Consensus 61 ~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 102 (137)
T 3c5r_A 61 LLLQH------KALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASR 102 (137)
T ss_dssp HHHHT------TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHc------CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999 9999999999999999999999999999999987764
|
| >2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.2e-16 Score=145.36 Aligned_cols=97 Identities=28% Similarity=0.335 Sum_probs=91.3
Q ss_pred hccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHH
Q 002122 730 LALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLD 809 (964)
Q Consensus 730 ~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~ 809 (964)
.+..|.||||+||+.|+.+++++||+. |+ ++|..|..|.||||+|+. .|+.++++
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~-----------------~~~~~d~~g~t~L~~A~~-~~~~~~~~ 59 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSK-------GA-----------------DVNARSKDGNTPLHLAAK-NGHAEIVK 59 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTT-------TC-----------------CSSCCCSSSCCTTHHHHT-TTCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCCcCCCCCCHHHHHHH-cCcHHHHH
Confidence 456789999999999999999999999 76 789999999999999999 99999999
Q ss_pred HhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 810 ALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 810 lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
+|+++ |++++.+|..|.||||+|+..|+.+++++|.+++++.
T Consensus 60 ~Ll~~------g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 101 (115)
T 2l6b_A 60 LLLAK------GADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADV 101 (115)
T ss_dssp HHTTT------TCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSH
T ss_pred HHHHc------CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC
Confidence 99999 9999999999999999999999999999999988764
|
| >3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A | Back alignment and structure |
|---|
Probab=99.66 E-value=3.3e-16 Score=144.29 Aligned_cols=94 Identities=23% Similarity=0.140 Sum_probs=88.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhh
Q 002122 733 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 812 (964)
Q Consensus 733 ~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL 812 (964)
.+.|+||+|++.|+.++|++||+. |+ ++|..|..|.||||+|+. .|+.+++++|+
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~-------~~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll 60 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAK-------GE-----------------DVNRTLEGGRKPLHYAAD-CGQLEILEFLL 60 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHT-------TC-----------------CTTSCCTTSSCHHHHHHH-TTCHHHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHc-------CC-----------------CcCccCCCCCcHHHHHHH-cCCHHHHHHHH
Confidence 467999999999999999999998 66 789999999999999999 99999999999
Q ss_pred cCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 813 DDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 813 ~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
++ |++++.+|..|.||||+|+..|+.+++++|.+++++.
T Consensus 61 ~~------g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 99 (123)
T 3aaa_C 61 LK------GADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADK 99 (123)
T ss_dssp TT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred Hc------CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99 9999999999999999999999999999999987654
|
| >1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1.2e-16 Score=153.34 Aligned_cols=141 Identities=17% Similarity=0.073 Sum_probs=102.1
Q ss_pred hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC
Q 002122 646 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE 724 (964)
Q Consensus 646 ~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~ 724 (964)
.+.+.+++|.+| .+.+..+.||++++......+ ...+++||+|+ .|+.++|++||+.+++.+.
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~---- 72 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPN-----------SYGRRPIQVMM-MGSARVAELLLLHGAEPNC---- 72 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCC-----------SSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC----
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCC-----------CCCCCHHHHHH-cCCHHHHHHHHHcCCCCCC----
Confidence 356788999998 588899999998774322222 23578999985 8999999999996543211
Q ss_pred CCchhhccCCCc-HHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCC
Q 002122 725 HPSLDLALTELG-LLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDG 803 (964)
Q Consensus 725 ~~~le~~l~G~T-pLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G 803 (964)
.+..|.| |||+|++.|+.++|++||++ |+ ++|.+|..|.||||+|+. .|
T Consensus 73 -----~d~~g~ttpL~~A~~~~~~~~v~~Ll~~-------ga-----------------~~~~~d~~g~tpl~~A~~-~~ 122 (156)
T 1bi7_B 73 -----ADPATLTRPVHDAAREGFLDTLVVLHRA-------GA-----------------RLDVRDAWGRLPVDLAEE-LG 122 (156)
T ss_dssp -----CCTTTCCCHHHHHHHHTCHHHHHHHHHH-------TC-----------------CSSCCCTTCCCHHHHHHH-HT
T ss_pred -----cCCCCCcHHHHHHHHCCCHHHHHHHHHc-------CC-----------------CCcccCCCCCCHHHHHHH-hC
Confidence 2455788 99999999999999999999 77 899999999999999999 99
Q ss_pred CHHHHHHhhcCCCCCccccccccCCCCCCCHHHHH
Q 002122 804 SEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYA 838 (964)
Q Consensus 804 ~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A 838 (964)
+.+++++|+++ ||+++.+|..|.||.+-+
T Consensus 123 ~~~~v~~Ll~~------ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 123 HRDVARYLRAA------AGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp CHHHHHHHSSC------C-----------------
T ss_pred HHHHHHHHHHc------CCCCCccCcCcCcccccC
Confidence 99999999999 999999999999998743
|
| >2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A | Back alignment and structure |
|---|
Probab=99.63 E-value=6.6e-16 Score=140.94 Aligned_cols=90 Identities=24% Similarity=0.229 Sum_probs=84.5
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHH
Q 002122 731 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDA 810 (964)
Q Consensus 731 ~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~l 810 (964)
+..|.|+||+||..|+.++|++||+. |+ ++|.+|..|.||||+|+. .|+.+++++
T Consensus 21 ~~~g~t~L~~A~~~g~~~~v~~Ll~~-------g~-----------------~i~~~d~~g~tpLh~A~~-~~~~~~v~~ 75 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDDEVRILMAN-------GA-----------------DVAAKDKNGSTPLHLAAR-NGHLEVVKL 75 (110)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTCCCHHHHHHH-TTCHHHHHH
T ss_pred CCccchHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCccCCCCCCHHHHHHH-cCCHHHHHH
Confidence 45678999999999999999999998 76 789999999999999999 999999999
Q ss_pred hhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 811 LTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 811 LL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
|+++ |++++.+|..|.||||+|+..|+.+++++|+
T Consensus 76 Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L~ 110 (110)
T 2zgd_A 76 LLEA------GADVXAQDKFGKTAFDISIDNGNEDLAEILQ 110 (110)
T ss_dssp HHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHC
T ss_pred HHHc------CCCccccccCCCcHHHHHHHcCCHHHHHHhC
Confidence 9999 9999999999999999999999999999873
|
| >2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C | Back alignment and structure |
|---|
Probab=99.62 E-value=8.2e-16 Score=144.32 Aligned_cols=95 Identities=24% Similarity=0.248 Sum_probs=89.0
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHh
Q 002122 732 LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 811 (964)
Q Consensus 732 l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lL 811 (964)
..+.||||+||+.|+.++|++||+. |+ ++|..|..|.||||+|+. .|+.+++++|
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~v~~L 66 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMAN-------GA-----------------DVNAKDEYGLTPLYLATA-HGHLEIVEVL 66 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-HTCHHHHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHc-------CC-----------------CCCCcCCCCCCHHHHHHH-cCCHHHHHHH
Confidence 3467999999999999999999999 76 789999999999999999 9999999999
Q ss_pred hcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 812 TDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 812 L~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
+++ |++++.+|..|.||||+|+..|+.+++++|.+++++.
T Consensus 67 l~~------g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 106 (136)
T 2jab_A 67 LKN------GADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADV 106 (136)
T ss_dssp HHT------TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHc------CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999 9999999999999999999999999999999987654
|
| >3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.7e-16 Score=159.66 Aligned_cols=134 Identities=9% Similarity=-0.072 Sum_probs=109.0
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCH----HHHHHHhccCCCccccccCccc
Q 002122 694 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSR----PLVDLLLRFVPLEVSDRLGSEN 769 (964)
Q Consensus 694 ~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~----e~VelLL~~~p~~~~dGa~~~~ 769 (964)
+.|+.|+..|+.+.++.++....+ ...+..|.||||+|+..++. ++|++||+. |+
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~~----------~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~-------Ga---- 66 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGYE----------DKESVLKSNILYDVLRNNNDEARYKISMFLINK-------GA---- 66 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSSS----------CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT-------TC----
T ss_pred cHHHHHHHcCCHHHHHHHHhcCcc----------cccccCCCCHHHHHHHcCCcchHHHHHHHHHHC-------CC----
Confidence 478999999999999999874211 11124589999999999975 599999999 88
Q ss_pred cccccccccccccCCCcCCCCCChHHHHHHhhCCC------HHHHHHhhcCCCCCccccccccCCCCCC-CHHHHHHHcC
Q 002122 770 KALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS------EDVLDALTDDPGMVGIEAWKNARDSSGS-TPEDYARLRG 842 (964)
Q Consensus 770 ~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~------~dVV~lLL~~p~~vg~gAdinarD~~G~-TPLh~A~~rG 842 (964)
++|.+|..|+||||+|+. .|+ .++|++|+++ ||++|++|..|. ||||+|+..+
T Consensus 67 -------------dvn~~d~~g~TpLh~a~~-~~~~~~~~~~~iv~~Ll~~------Gadin~~d~~g~ttpLh~A~~~~ 126 (186)
T 3t8k_A 67 -------------DIKSRTKEGTTLFFPLFQ-GGGNDITGTTELCKIFLEK------GADITALYKPYKIVVFKNIFNYF 126 (186)
T ss_dssp -------------CSSCCCTTCCCTHHHHHH-HCTTCHHHHHHHHHHHHHT------TCCSSSCBGGGTBCTTGGGGGCC
T ss_pred -------------CCCCCCCCCCcHHHHHHH-cCCcchhhHHHHHHHHHHC------CCCCCccCCCcCchHHHHHHHcC
Confidence 999999999999999999 676 5789999999 999999999999 9999999954
Q ss_pred -----CHHHHHHHHH-hhhcCCC---CCCceeecC
Q 002122 843 -----HYSYIHLVQK-KINKRPN---GGHVVVDIC 868 (964)
Q Consensus 843 -----h~svv~LL~~-k~ak~~~---~~~v~v~ip 868 (964)
+.+++++|.+ ++++... .+.+.++++
T Consensus 127 ~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A 161 (186)
T 3t8k_A 127 VDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFV 161 (186)
T ss_dssp SCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHH
T ss_pred CChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHH
Confidence 4568999988 7776432 334444443
|
| >1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=5.7e-16 Score=145.37 Aligned_cols=95 Identities=20% Similarity=0.186 Sum_probs=89.2
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHH
Q 002122 731 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDA 810 (964)
Q Consensus 731 ~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~l 810 (964)
+..|.||||+|++.|+.++|++||+. |+ ++|.++..|.||||+|+. |+.+++++
T Consensus 9 ~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~--~~~~~v~~ 62 (136)
T 1d9s_A 9 GGSSDAGLATAAARGQVETVRQLLEA-------GA-----------------DPNALNRFGRRPIQVMMM--GSAQVAEL 62 (136)
T ss_dssp CCCCSCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CTTCCCTTCCTTTTTSTT--SCHHHHHH
T ss_pred CCCCccHHHHHHHcCCHHHHHHHHHc-------CC-----------------CcCCcCCCCCCHHHHHHc--CCHHHHHH
Confidence 45688999999999999999999999 77 889999999999999998 99999999
Q ss_pred hhcCCCCCccccccccCCCC-CCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 811 LTDDPGMVGIEAWKNARDSS-GSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 811 LL~~p~~vg~gAdinarD~~-G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
|+++ |++++.+|.. |.||||+|+..|+.+++++|.+++++.
T Consensus 63 Ll~~------g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 104 (136)
T 1d9s_A 63 LLLH------GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARL 104 (136)
T ss_dssp HHHH------TCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCC
T ss_pred HHHC------CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999 9999999999 999999999999999999999987654
|
| >2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.5e-15 Score=156.67 Aligned_cols=107 Identities=21% Similarity=0.176 Sum_probs=95.2
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHH
Q 002122 731 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDA 810 (964)
Q Consensus 731 ~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~l 810 (964)
...+.||||+|++.|+.++|++||+. |+ ++|..|..|.||||+|+. .|+.++|++
T Consensus 18 ~~~~~t~L~~A~~~g~~~~v~~Ll~~-------g~-----------------~~~~~d~~g~tpLh~A~~-~g~~~~v~~ 72 (229)
T 2vge_A 18 RLNPLVLLLDAALTGELEVVQQAVKE-------MN-----------------DPSQPNEEGITALHNAIC-GANYSIVDF 72 (229)
T ss_dssp TSCHHHHHHHHHHHTCHHHHHHHHHH-------SS-----------------CTTCCCTTSCCHHHHHHH-TTCHHHHHH
T ss_pred ccchhHHHHHHHHcCCHHHHHHHHhc-------CC-----------------CCCCCCCCCCCHHHHHHH-cCCHHHHHH
Confidence 44577999999999999999999999 77 889999999999999999 999999999
Q ss_pred hhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCCC----CCCceeecC
Q 002122 811 LTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPN----GGHVVVDIC 868 (964)
Q Consensus 811 LL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~~----~~~v~v~ip 868 (964)
|+++ |+++|.+|..|.||||+|+..|+.+++++|.+++++... .+.+.+.++
T Consensus 73 Ll~~------ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A 128 (229)
T 2vge_A 73 LITA------GANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKC 128 (229)
T ss_dssp HHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGC
T ss_pred HHHC------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHH
Confidence 9999 999999999999999999999999999999998876431 344555554
|
| >1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.60 E-value=2.8e-15 Score=135.83 Aligned_cols=94 Identities=30% Similarity=0.369 Sum_probs=88.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhh
Q 002122 733 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 812 (964)
Q Consensus 733 ~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL 812 (964)
+|.||||+|++.|+.++|++|++. |+ +++..+..|.||||+|+. .|+.+++++|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-------~~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~~~~Ll 55 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEA-------GA-----------------DVNAKDKNGRTPLHLAAR-NGHLEVVKLLL 55 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHH-------TC-----------------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHc-------CC-----------------CCCCcCCCCCcHHHHHHH-cCcHHHHHHHH
Confidence 378999999999999999999998 66 788899999999999999 99999999999
Q ss_pred cCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 813 DDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 813 ~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
++ +++++.+|..|.||||+|+..|+.+++++|.+++++.
T Consensus 56 ~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~ 94 (126)
T 1n0r_A 56 EA------GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 94 (126)
T ss_dssp HT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred Hc------CCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCC
Confidence 99 9999999999999999999999999999999987653
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A | Back alignment and structure |
|---|
Probab=99.58 E-value=4.3e-15 Score=150.00 Aligned_cols=97 Identities=22% Similarity=0.246 Sum_probs=90.2
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHH
Q 002122 731 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDA 810 (964)
Q Consensus 731 ~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~l 810 (964)
+..|.||||+||+.|+.++|++||+. |+ ++|..|..|.||||+||. .|+.++|++
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~v~~ 124 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDN-------RV-----------------GVNGLDKAGSTALYWACH-GGHKDIVEM 124 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhC-------CC-----------------CccccCCCCCCHHHHHHH-cCCHHHHHH
Confidence 34578999999999999999999998 77 789999999999999999 999999999
Q ss_pred hhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 811 LTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 811 LL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
|++++ +++++.+|..|.||||+|+.+|+.+++++|.+++++.
T Consensus 125 Ll~~~-----g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 166 (222)
T 3ehr_A 125 LFTQP-----NIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGART 166 (222)
T ss_dssp HTTST-----TCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCS
T ss_pred HHcCC-----CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99874 8999999999999999999999999999999998764
|
| >2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.6e-15 Score=136.38 Aligned_cols=105 Identities=24% Similarity=0.187 Sum_probs=91.5
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
...++||+|+..++.++++.||+..++.+ ..+..|.||||+|+..++.++|++||++ |+
T Consensus 8 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---------~~d~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~----- 66 (115)
T 2l6b_A 8 DGNTPLHNAAKNGHAEEVKKLLSKGADVN---------ARSKDGNTPLHLAAKNGHAEIVKLLLAK-------GA----- 66 (115)
T ss_dssp SSCCHHHHHHHHTCHHHHHHHTTTTCCSS---------CCCSSSCCTTHHHHTTTCHHHHHHHTTT-------TC-----
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHcCcHHHHHHHHHc-------CC-----
Confidence 45789999999999999999998654321 1245688999999999999999999999 77
Q ss_pred ccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHH
Q 002122 771 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPE 835 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPL 835 (964)
+++.+|..|.||||+|+. .|+.+++++|+++ ||++|.++..|.||-
T Consensus 67 ------------~~~~~d~~g~tpl~~A~~-~~~~~~~~~Ll~~------ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 67 ------------DVNARSKDGNTPEHLAKK-NGHHEIVKLLDAK------GADVNARSWGSSHHH 112 (115)
T ss_dssp ------------CTTCCCTTCCCTTHHHHT-TTCHHHHHHHHTT------SSSHHHHSCCCC---
T ss_pred ------------CCcccCCCCCCHHHHHHH-CCCHHHHHHHHHc------CCCCCcCCccccccc
Confidence 789999999999999999 9999999999999 999999999999985
|
| >2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.56 E-value=3e-15 Score=161.26 Aligned_cols=143 Identities=14% Similarity=-0.020 Sum_probs=104.1
Q ss_pred cccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHc---CchHHHHHHhhhhccCcccCCCCC
Q 002122 651 IDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDH---EWCAVVKKLLHILLDGTVSLGEHP 726 (964)
Q Consensus 651 ~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~---g~~aVVk~LL~~l~d~~vd~g~~~ 726 (964)
..++.++ .+.+..+-+++..+......- ..........++||+|+.. ++.++|++||+.+++.+.
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~-----~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~------ 221 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPL-----PGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA------ 221 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCE-----ECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTC------
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccC-----CCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCC------
Confidence 3466666 366666777776653211100 0000123457899999987 899999999997553221
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHH
Q 002122 727 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 806 (964)
Q Consensus 727 ~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~d 806 (964)
.+..|.||||+|+..|+.++|++||++ |+ ++|.+|..|.||||+|+. .|+.+
T Consensus 222 ---~d~~G~TpLh~A~~~g~~~~v~~Ll~~-------ga-----------------d~~~~d~~G~TpL~~A~~-~~~~~ 273 (301)
T 2b0o_E 222 ---KAADGNTALHYAALYNQPDCLKLLLKG-------RA-----------------LVGTVNEAGETALDIARK-KHHKE 273 (301)
T ss_dssp ---CCTTCCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CCSCCCTTSCCHHHHHHH-HTCHH
T ss_pred ---CCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCCcCCCCCCHHHHHHH-cCCHH
Confidence 245689999999999999999999999 88 899999999999999999 99999
Q ss_pred HHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCH
Q 002122 807 VLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHY 844 (964)
Q Consensus 807 VV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~ 844 (964)
++++|+++ +++ .|.||||+|+..||.
T Consensus 274 iv~~Ll~~------ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 274 CEELLEQA------QAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHHH------HHH------TTSSCCC--------
T ss_pred HHHHHHHh------cCC------CCCChhHHHHhcCCc
Confidence 99999998 776 589999999999874
|
| >2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 | Back alignment and structure |
|---|
Probab=99.55 E-value=2.6e-16 Score=175.72 Aligned_cols=156 Identities=12% Similarity=0.057 Sum_probs=120.4
Q ss_pred CccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCc
Q 002122 649 GKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS 727 (964)
Q Consensus 649 g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~ 727 (964)
+.+++|.+| .+.+..+.+|+.++......+ .......+|||+|+.+|+.++|++|++.+++... ..
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~--------~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~-----~~ 158 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCLLLTSDEIVK--------VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIM-----AM 158 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC----------CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHH-----HH
T ss_pred cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHH--------HhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-----cc
Confidence 468999999 689999999998874111000 1112346799999999999999999996532100 00
Q ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCc--CCCCCChHHHHHH-hhCCC
Q 002122 728 LDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDV--IGPAGLTPIHIAA-GKDGS 804 (964)
Q Consensus 728 le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~--~d~~G~TPLHiAA-~~~G~ 804 (964)
. .... .||||+|+++|+.++|++||++ |+ +++. .|..|.||||+|| . .|+
T Consensus 159 i-~~~~-~TpLh~Aa~~G~~eiv~~Ll~~-------ga-----------------~~~~~~~d~~g~TpL~~Aa~~-~G~ 211 (376)
T 2aja_A 159 I-QAEN-YHAFRLAAENGHLHVLNRLCEL-------AP-----------------TEATAMIQAENYYAFRWAAVG-RGH 211 (376)
T ss_dssp H-SHHH-HHHHHHHHHTTCHHHHHHHHHS-------CG-----------------GGHHHHHHHHHHHHHHHHHST-TCC
T ss_pred c-CCCC-CCHHHHHHHCCCHHHHHHHHHc-------CC-----------------ccchhccCCCCCCHHHHHHHH-CCC
Confidence 1 0112 6999999999999999999999 76 5555 7778999999999 8 999
Q ss_pred HHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 805 EDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 805 ~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
.+||++|+++ |++ |.||||+|+.+||.+++++|.+++++.
T Consensus 212 ~eiv~~Ll~~------ga~-------~~taL~~Aa~~g~~evv~lL~~~ga~~ 251 (376)
T 2aja_A 212 HNVINFLLDC------PVM-------LAYAEIHEFEYGEKYVNPFIARHVNRL 251 (376)
T ss_dssp HHHHHHHTTS------HHH-------HHHHHHCTTTTTTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHhC------CCc-------cchHHHHHHHCCCHHHHHHHHhcCccc
Confidence 9999999998 653 889999999999999999999988754
|
| >1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.55 E-value=1.8e-14 Score=126.90 Aligned_cols=88 Identities=26% Similarity=0.280 Sum_probs=78.8
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
+++||+|+..|+.+++++|++..++.+ ..+..|.||||+|+..|+.++|++|+++ |+
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~g~~~n---------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-------ga------- 59 (93)
T 1n0q_A 3 RTPLHLAARNGHLEVVKLLLEAGADVN---------AKDKNGRTPLHLAARNGHLEVVKLLLEA-------GA------- 59 (93)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCc---------ccCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-------
Confidence 679999999999999999999654321 1345689999999999999999999999 77
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcC
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDD 814 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~ 814 (964)
++|.+|..|.||||+|+. .|+.+++++|+++
T Consensus 60 ----------~~~~~d~~g~t~l~~A~~-~~~~~~~~~Ll~~ 90 (93)
T 1n0q_A 60 ----------DVNAKDKNGRTPLHLAAR-NGHLEVVKLLLEA 90 (93)
T ss_dssp ----------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT
T ss_pred ----------CCCccCCCCCCHHHHHHH-cCCHHHHHHHHHc
Confidence 889999999999999999 9999999999998
|
| >2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 | Back alignment and structure |
|---|
Probab=99.53 E-value=8.2e-16 Score=171.78 Aligned_cols=129 Identities=12% Similarity=0.085 Sum_probs=102.2
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
+++||+|+..|+.++|+.||+.+..... ... .+..+.||||+|++.|+.++|++|+++ |++..
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~----~~~--~~~~~~tpL~~Aa~~G~~eiv~~Ll~~-------gad~~---- 155 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEI----VKV--IQAENYQAFRLAAENGHLHVLNRLCEL-------APTEI---- 155 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSS----CC----CHHHHHHHHHHHHTTCHHHHHHHHHS-------CTTTH----
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHH----HHH--hccCCCCHHHHHHHcCCHHHHHHHHhC-------CCCcc----
Confidence 5899999999999999999986431100 001 122366899999999999999999999 54100
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCcccccccc--CCCCCCCHHHHHH-HcCCHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNA--RDSSGSTPEDYAR-LRGHYSYIHL 849 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdina--rD~~G~TPLh~A~-~rGh~svv~L 849 (964)
.++..+.+ .||||+||. .|+.+||++|+++ |++++. +|..|.||||+|+ .+||.+++++
T Consensus 156 ----------~~~i~~~~-~TpLh~Aa~-~G~~eiv~~Ll~~------ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~ 217 (376)
T 2aja_A 156 ----------MAMIQAEN-YHAFRLAAE-NGHLHVLNRLCEL------APTEATAMIQAENYYAFRWAAVGRGHHNVINF 217 (376)
T ss_dssp ----------HHHHSHHH-HHHHHHHHH-TTCHHHHHHHHHS------CGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHH
T ss_pred ----------ccccCCCC-CCHHHHHHH-CCCHHHHHHHHHc------CCccchhccCCCCCCHHHHHHHHCCCHHHHHH
Confidence 01223333 999999999 9999999999999 999988 8999999999999 9999999999
Q ss_pred HHHhhhc
Q 002122 850 VQKKINK 856 (964)
Q Consensus 850 L~~k~ak 856 (964)
|.++++.
T Consensus 218 Ll~~ga~ 224 (376)
T 2aja_A 218 LLDCPVM 224 (376)
T ss_dssp HTTSHHH
T ss_pred HHhCCCc
Confidence 9987653
|
| >3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A | Back alignment and structure |
|---|
Probab=99.53 E-value=1.8e-14 Score=141.97 Aligned_cols=94 Identities=20% Similarity=0.115 Sum_probs=87.1
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHh
Q 002122 732 LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 811 (964)
Q Consensus 732 l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lL 811 (964)
..|.||||.|++.|+.++|++||+. + ++|..|..|.||||+|+. .|+.+++++|
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~~--------~-----------------~~~~~d~~g~t~L~~A~~-~~~~~~v~~L 95 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLED--------R-----------------DVDAVDENGRTALLFVAG-LGSDKCVRLL 95 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTTT--------S-----------------CTTCCCTTSCCHHHHHHH-HTCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhc--------C-----------------CCCCcCCCCCCHHHHHHH-cCCHHHHHHH
Confidence 3578999999999999999999973 1 788899999999999999 9999999999
Q ss_pred hcCCCCCccccccccCC-CCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 812 TDDPGMVGIEAWKNARD-SSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 812 L~~p~~vg~gAdinarD-~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
+++ |+++|.+| .+|.||||+|+..|+.+++++|.+++++.
T Consensus 96 l~~------ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 136 (183)
T 3deo_A 96 AEA------GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI 136 (183)
T ss_dssp HHT------TCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCT
T ss_pred HHc------CCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCC
Confidence 999 99999999 89999999999999999999999988764
|
| >3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A | Back alignment and structure |
|---|
Probab=99.49 E-value=3.3e-14 Score=147.31 Aligned_cols=94 Identities=20% Similarity=0.115 Sum_probs=87.1
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHh
Q 002122 732 LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 811 (964)
Q Consensus 732 l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lL 811 (964)
..|.||||+|++.|+.++|++||+. + ++|..|..|.||||+|+. .|+.++|++|
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~~--------~-----------------~~~~~d~~g~t~L~~A~~-~g~~~~v~~L 96 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLED--------R-----------------DVDAVDENGRTALLFVAG-LGSDKCVRLL 96 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTTT--------C-----------------CTTCBCTTSCBHHHHHHH-HTCHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHcC--------C-----------------CCCCcCCCCCCHHHHHHH-CCCHHHHHHH
Confidence 3478999999999999999999973 1 788999999999999999 9999999999
Q ss_pred hcCCCCCccccccccCC-CCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 812 TDDPGMVGIEAWKNARD-SSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 812 L~~p~~vg~gAdinarD-~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
+++ |+++|.+| ..|.||||+|+.+||.+++++|.+++++.
T Consensus 97 l~~------ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 137 (244)
T 3ui2_A 97 AEA------GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI 137 (244)
T ss_dssp HHT------TCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHc------CCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 999 99999999 88999999999999999999999988764
|
| >3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A | Back alignment and structure |
|---|
Probab=99.35 E-value=1.4e-12 Score=145.37 Aligned_cols=94 Identities=24% Similarity=0.186 Sum_probs=87.9
Q ss_pred CCcHHHHHHHc-CCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCC--CCCChHHHHHHhhCCCHHHHHH
Q 002122 734 ELGLLHRAVRK-NSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIG--PAGLTPIHIAAGKDGSEDVLDA 810 (964)
Q Consensus 734 G~TpLH~AVr~-g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d--~~G~TPLHiAA~~~G~~dVV~l 810 (964)
+.|+||.|++. ++.++|++||+. |+ ++|..+ ..|.||||+||. .|+.++|++
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~-------Ga-----------------dvn~~~~~~~g~TpLh~Aa~-~g~~~iv~~ 253 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAH-------GA-----------------DVNWVNGGQDNATPLIQATA-ANSLLACEF 253 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHT-------TC-----------------CTTCCCTTTTCCCHHHHHHH-TTCHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHc-------CC-----------------CCCccccccCCCCHHHHHHH-CCCHHHHHH
Confidence 44899999999 999999999999 77 788887 899999999999 999999999
Q ss_pred hhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 811 LTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 811 LL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
|+++ ||++|.+|..|.||||+|+..||.+++++|.+++++..
T Consensus 254 LL~~------Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~ 295 (368)
T 3jue_A 254 LLQN------GANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLG 295 (368)
T ss_dssp HHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHc------CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCC
Confidence 9999 99999999999999999999999999999999987643
|
| >1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 | Back alignment and structure |
|---|
Probab=99.32 E-value=3.7e-12 Score=135.57 Aligned_cols=100 Identities=16% Similarity=0.075 Sum_probs=86.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhC---CCHHHHHH
Q 002122 734 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKD---GSEDVLDA 810 (964)
Q Consensus 734 G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~---G~~dVV~l 810 (964)
..++||.|++.|+.+.+..|+.. |++. ...+.++..+..|.||||+||. . |+.++|++
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~-------g~~~-----------~~~~~l~~~~~~g~t~Lh~A~~-~~~~~~~~~v~~ 190 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYAD-------GVDL-----------TEKIPLANGHEPDETALHLAVR-SVDRTSLHIVDF 190 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHT-------TCCT-----------TSBCCCSSCSSTTCBHHHHHHH-HCCTTTHHHHHH
T ss_pred hhhhhhhHhhhcccHHHHHHHHh-------hcch-----------hhhccccccccCCCCcchHHHH-hcccchHHHHHH
Confidence 34799999999999999999988 5411 1112255668899999999999 6 89999999
Q ss_pred hhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 811 LTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 811 LL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
|+++ ||++|.+|..|.||||+|+..||.+++++|.+++++..
T Consensus 191 Ll~~------ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~ 232 (278)
T 1dcq_A 191 LVQN------SGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIE 232 (278)
T ss_dssp HHHH------CSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHC------CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999 99999999999999999999999999999999887643
|
| >2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A | Back alignment and structure |
|---|
Probab=99.32 E-value=4e-12 Score=115.82 Aligned_cols=87 Identities=21% Similarity=0.129 Sum_probs=76.4
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
...++||+|+..|+.++++.||+..++.+ . .+..|.||||+||..|+.++|++||++ |+
T Consensus 23 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~----~-----~d~~g~tpLh~A~~~~~~~~v~~Ll~~-------ga----- 81 (110)
T 2zgd_A 23 DLGKKLLEAARAGQDDEVRILMANGADVA----A-----KDKNGSTPLHLAARNGHLEVVKLLLEA-------GA----- 81 (110)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCTT----C-----CCTTCCCHHHHHHHTTCHHHHHHHHHT-------TC-----
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCCC----c-----cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----
Confidence 35789999999999999999998644321 1 245689999999999999999999999 77
Q ss_pred ccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHh
Q 002122 771 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 811 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lL 811 (964)
++|.+|..|.||||+|+. .|+.+++++|
T Consensus 82 ------------~~~~~d~~g~tpl~~A~~-~~~~~~~~~L 109 (110)
T 2zgd_A 82 ------------DVXAQDKFGKTAFDISID-NGNEDLAEIL 109 (110)
T ss_dssp ------------CTTCCCTTSCCHHHHHHH-HTCHHHHHHH
T ss_pred ------------CccccccCCCcHHHHHHH-cCCHHHHHHh
Confidence 889999999999999999 9999999987
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 964 | ||||
| d1ul4a_ | 81 | g.72.1.1 (A:) Squamosa promoter binding protein-li | 5e-45 | |
| d1ul5a_ | 86 | g.72.1.1 (A:) Squamosa promoter binding protein-li | 7e-45 | |
| d1wj0a_ | 58 | g.72.1.1 (A:) Squamosa-promoter binding-like prote | 1e-32 | |
| d1n11a_ | 408 | d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta | 2e-04 | |
| d1n11a_ | 408 | d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta | 0.002 | |
| d1wdya_ | 285 | d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas | 9e-04 | |
| d1sw6a_ | 301 | d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker | 0.002 | |
| d2fo1e1 | 277 | d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele | 0.002 |
| >d1ul4a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 4, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 81 | Back information, alignment and structure |
|---|
class: Small proteins fold: SBT domain superfamily: SBT domain family: SBT domain domain: Squamosa promoter binding protein-like 4, DNA-binding domain species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 154 bits (390), Expect = 5e-45
Identities = 54/79 (68%), Positives = 65/79 (82%)
Query: 149 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKR 208
+CQV+ C AD+ AK YHRRHKVCE+H+KAS + + QRFCQQCSRFH LQEFDE KR
Sbjct: 3 LCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKR 62
Query: 209 SCRRRLAGHNKRRRKTNPD 227
SCRRRLAGHN+RRRK++ +
Sbjct: 63 SCRRRLAGHNERRRKSSGE 81
|
| >d1ul5a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 7, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 86 | Back information, alignment and structure |
|---|
class: Small proteins fold: SBT domain superfamily: SBT domain family: SBT domain domain: Squamosa promoter binding protein-like 7, DNA-binding domain species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 154 bits (390), Expect = 7e-45
Identities = 42/81 (51%), Positives = 56/81 (69%)
Query: 148 AVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGK 207
A CQV DC AD+S K YH+RH+VC + AS ++ +R+CQQC +FH+L +FDEGK
Sbjct: 2 ARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGK 61
Query: 208 RSCRRRLAGHNKRRRKTNPDA 228
RSCRR+L HN RR++ D
Sbjct: 62 RSCRRKLERHNNRRKRKPVDK 82
|
| >d1wj0a_ g.72.1.1 (A:) Squamosa-promoter binding-like protein 12, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 58 | Back information, alignment and structure |
|---|
class: Small proteins fold: SBT domain superfamily: SBT domain family: SBT domain domain: Squamosa-promoter binding-like protein 12, DNA-binding domain species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 118 bits (297), Expect = 1e-32
Identities = 45/56 (80%), Positives = 51/56 (91%)
Query: 149 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFD 204
CQV++CGADLS KDYHRRHKVCE+HSKA+ ALVG +MQRFCQQCSRFHVL+EFD
Sbjct: 3 CCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 58
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.7 bits (99), Expect = 2e-04
Identities = 27/134 (20%), Positives = 52/134 (38%), Gaps = 22/134 (16%)
Query: 738 LHRAVRKNSRPLVDLLLR------------FVPLEVSDRLGSENKALVDGVHKGFLFRPD 785
LH ++ P+ D+L++ + PL V+ G+ H+ +
Sbjct: 268 LHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKT 327
Query: 786 VIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYS 845
G +P+H AA + G D++ L + A N S G+TP A+ G+ S
Sbjct: 328 ---KLGYSPLHQAAQQ-GHTDIVTLL------LKNGASPNEVSSDGTTPLAIAKRLGYIS 377
Query: 846 YIHLVQKKINKRPN 859
+++ ++
Sbjct: 378 VTDVLKVVTDETSF 391
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.2 bits (90), Expect = 0.002
Identities = 27/112 (24%), Positives = 39/112 (34%), Gaps = 31/112 (27%)
Query: 738 LHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHI 797
LH A P+V LL + A P+V TP+H+
Sbjct: 4 LHVASFMGHLPIVKNLL-------------QRGA-----------SPNVSNVKVETPLHM 39
Query: 798 AAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHL 849
AA + G +V L + +A NA+ TP A GH + + L
Sbjct: 40 AA-RAGHTEVAKYLLQN------KAKVNAKAKDDQTPLHCAARIGHTNMVKL 84
|
| >d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: RNase L, 2-5a-dependent ribonuclease species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.9 bits (92), Expect = 9e-04
Identities = 26/126 (20%), Positives = 43/126 (34%), Gaps = 20/126 (15%)
Query: 738 LHRAVRKNSRPLVDLLLRFVPLEVS--DRLG---------SENKALVDGVHKGFLFR--- 783
L A K ++ +LL + +V+ D +G S + + V+ + L
Sbjct: 152 LMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD 211
Query: 784 PDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGH 843
+V G G TP+ +A K ++ L + N DS G T A
Sbjct: 212 VNVRGERGKTPLILAVEK-KHLGLVQRLLEQEH-----IEINDTDSDGKTALLLAVELKL 265
Query: 844 YSYIHL 849
L
Sbjct: 266 KKIAEL 271
|
| >d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Swi6 ankyrin-repeat fragment species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.3 bits (90), Expect = 0.002
Identities = 27/197 (13%), Positives = 51/197 (25%), Gaps = 29/197 (14%)
Query: 643 ADVERFGK-IDTKNQAMDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMD 701
++ ++ L D +I S
Sbjct: 131 SNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGM 190
Query: 702 HEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEV 761
A K L IL+ V P + + + +++ L
Sbjct: 191 TGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------- 243
Query: 762 SDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIE 821
L +++ G T ++IAA + G+ ++DAL +
Sbjct: 244 ---LKWIIANMLNAQDS-----------NGDTCLNIAA-RLGNISIVDAL------LDYG 282
Query: 822 AWKNARDSSGSTPEDYA 838
A + SG P D+
Sbjct: 283 ADPFIANKSGLRPVDFG 299
|
| >d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Lin-12 species: Caenorhabditis elegans [TaxId: 6239]
Score = 38.9 bits (89), Expect = 0.002
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Query: 791 GLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 850
G TPI +AA ++G +V+ L + A A D++ T A+ H++ + +
Sbjct: 221 GKTPIMLAA-QEGRIEVVMYL------IQQGASVEAVDATDHTARQLAQANNHHNIVDIF 273
Query: 851 QK 852
+
Sbjct: 274 DR 275
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 964 | |||
| d1ul5a_ | 86 | Squamosa promoter binding protein-like 7, DNA-bind | 100.0 | |
| d1ul4a_ | 81 | Squamosa promoter binding protein-like 4, DNA-bind | 100.0 | |
| d1wj0a_ | 58 | Squamosa-promoter binding-like protein 12, DNA-bin | 99.94 | |
| d1oy3d_ | 255 | Transcription factor inhibitor I-kappa-B-beta, IKB | 99.85 | |
| d1uoha_ | 223 | 26S proteasome non-ATPase regulatory subunit 10, g | 99.81 | |
| d1uoha_ | 223 | 26S proteasome non-ATPase regulatory subunit 10, g | 99.81 | |
| d1dcqa1 | 154 | Pyk2-associated protein beta {Mouse (Mus musculus) | 99.78 | |
| d1bi7b_ | 125 | Cell cycle inhibitor p16ink4A {Human (Homo sapiens | 99.77 | |
| d1ixva_ | 229 | 26S proteasome non-ATPase regulatory subunit 10, g | 99.77 | |
| d1oy3d_ | 255 | Transcription factor inhibitor I-kappa-B-beta, IKB | 99.76 | |
| d1ycsb1 | 130 | 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | 99.76 | |
| d1n11a_ | 408 | Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | 99.75 | |
| d2fo1e1 | 277 | Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | 99.74 | |
| d1bd8a_ | 156 | Cell cycle inhibitor p19ink4D {Human (Homo sapiens | 99.74 | |
| d1myoa_ | 118 | Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116] | 99.74 | |
| d1s70b_ | 291 | Myosin phosphatase targeting subunit 1, MYPT1 {Chi | 99.74 | |
| d1awcb_ | 153 | GA bindinig protein (GABP) beta 1 {Mouse (Mus musc | 99.74 | |
| d1wdya_ | 285 | RNase L, 2-5a-dependent ribonuclease {Human (Homo | 99.73 | |
| d1iknd_ | 221 | I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606 | 99.73 | |
| d1ot8a_ | 209 | Neurogenic locus notch receptor domain {Fruit fly | 99.73 | |
| d1ihba_ | 156 | p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606] | 99.72 | |
| d1ixva_ | 229 | 26S proteasome non-ATPase regulatory subunit 10, g | 99.68 | |
| d1s70b_ | 291 | Myosin phosphatase targeting subunit 1, MYPT1 {Chi | 99.68 | |
| d1k1aa_ | 228 | bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | 99.67 | |
| d1ycsb1 | 130 | 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | 99.67 | |
| d1myoa_ | 118 | Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116] | 99.67 | |
| d1k1aa_ | 228 | bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | 99.63 | |
| d1n11a_ | 408 | Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | 99.63 | |
| d1bd8a_ | 156 | Cell cycle inhibitor p19ink4D {Human (Homo sapiens | 99.61 | |
| d1iknd_ | 221 | I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606 | 99.59 | |
| d2fo1e1 | 277 | Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | 99.59 | |
| d1awcb_ | 153 | GA bindinig protein (GABP) beta 1 {Mouse (Mus musc | 99.59 | |
| d1ihba_ | 156 | p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606] | 99.58 | |
| d2ajaa1 | 346 | Hypothetical protein LPG2416 {Legionella pneumophi | 99.54 | |
| d1sw6a_ | 301 | Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch | 99.51 | |
| d1sw6a_ | 301 | Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch | 99.5 | |
| d1bi7b_ | 125 | Cell cycle inhibitor p16ink4A {Human (Homo sapiens | 99.5 | |
| d1ot8a_ | 209 | Neurogenic locus notch receptor domain {Fruit fly | 99.47 | |
| d2ajaa1 | 346 | Hypothetical protein LPG2416 {Legionella pneumophi | 99.38 | |
| d1dcqa1 | 154 | Pyk2-associated protein beta {Mouse (Mus musculus) | 99.37 | |
| d1wdya_ | 285 | RNase L, 2-5a-dependent ribonuclease {Human (Homo | 99.33 |
| >d1ul5a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 7, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Small proteins fold: SBT domain superfamily: SBT domain family: SBT domain domain: Squamosa promoter binding protein-like 7, DNA-binding domain species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=3.3e-38 Score=279.60 Aligned_cols=83 Identities=51% Similarity=0.950 Sum_probs=81.0
Q ss_pred CceeccCCchhhccChhhhcccccchhhcCcceeeeCCcchhhhhhhccCcccccccCccchHHHHHhhhhhhhccCCCC
Q 002122 148 AVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPD 227 (964)
Q Consensus 148 ~~Cqv~gC~~~l~~~k~y~~R~~vC~~H~ka~~v~~~G~~~RfCQqC~rfh~l~eFd~~krsCr~~L~~hn~rrr~~~~~ 227 (964)
++||||||++||+.+|+||+||||||.|+||++|+|+|+++||||||+|||+|+|||++|||||+||++||.||||++++
T Consensus 2 ~rCqV~gC~~dls~~k~Y~rRhrvCe~H~ka~~V~v~G~~~RfCQqC~rFH~L~eFD~~krSCr~rL~~hn~RRRk~~~~ 81 (86)
T d1ul5a_ 2 ARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKPVD 81 (86)
T ss_dssp CSCEETTEECCCSSCCSSSGGGTCCHHHHHHSEEEETTEEEEECTTTSSEEEGGGBCSSTTSBSSSCCCSSSCCCCCSCS
T ss_pred CeeeeCCCcchhhhCHHhhhhhHHHHHhcCCCeEEECCeechHHHHhccccChhhhccccccHHHHHHHHHHHhccCCcc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC
Q 002122 228 AVA 230 (964)
Q Consensus 228 ~~~ 230 (964)
+.+
T Consensus 82 ~~g 84 (86)
T d1ul5a_ 82 KGG 84 (86)
T ss_dssp SCC
T ss_pred ccc
Confidence 765
|
| >d1ul4a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 4, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Small proteins fold: SBT domain superfamily: SBT domain family: SBT domain domain: Squamosa promoter binding protein-like 4, DNA-binding domain species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=6.9e-38 Score=275.04 Aligned_cols=80 Identities=68% Similarity=1.174 Sum_probs=78.3
Q ss_pred CceeccCCchhhccChhhhcccccchhhcCcceeeeCCcchhhhhhhccCcccccccCccchHHHHHhhhhhhhccCCCC
Q 002122 148 AVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPD 227 (964)
Q Consensus 148 ~~Cqv~gC~~~l~~~k~y~~R~~vC~~H~ka~~v~~~G~~~RfCQqC~rfh~l~eFd~~krsCr~~L~~hn~rrr~~~~~ 227 (964)
.+||||||++||+.+|+||+||+|||.|+||++|+++|+++||||||+|||+|+|||++|||||+||++||.||||+++|
T Consensus 2 ~~CqVdgC~~dls~~k~YhrRhrvCe~H~ka~~V~v~G~~~RfCQqC~rFH~L~eFD~~krSCr~rL~~hn~RRRk~~~~ 81 (81)
T d1ul4a_ 2 RLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGE 81 (81)
T ss_dssp CCCSSTTCCCCCTTCCHHHHHTTCCHHHHTCSCEEETTEEEEECTTTSSEEETTTCCSSCCSCSTTTTCCCCCCCSCCCC
T ss_pred CeeeeCCCcchHHhhHHhhhhhHHHHHHcCCCeEEECCeechHHHHhcccccHHHhccccccHHHHHHHHhHHhccCCCC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999875
|
| >d1wj0a_ g.72.1.1 (A:) Squamosa-promoter binding-like protein 12, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Small proteins fold: SBT domain superfamily: SBT domain family: SBT domain domain: Squamosa-promoter binding-like protein 12, DNA-binding domain species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.94 E-value=3e-29 Score=207.14 Aligned_cols=56 Identities=80% Similarity=1.441 Sum_probs=55.5
Q ss_pred ceeccCCchhhccChhhhcccccchhhcCcceeeeCCcchhhhhhhccCccccccc
Q 002122 149 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFD 204 (964)
Q Consensus 149 ~Cqv~gC~~~l~~~k~y~~R~~vC~~H~ka~~v~~~G~~~RfCQqC~rfh~l~eFd 204 (964)
+||||||++||+.+|+|||||||||.|+||++|+++|++|||||||+|||+|+|||
T Consensus 3 ~CqV~gC~~dl~~~k~YhrRhkvCe~H~ka~~V~v~G~~~RFCQQCsrFH~L~eFD 58 (58)
T d1wj0a_ 3 CCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 58 (58)
T ss_dssp ECSSTTCCCEETSCCSSTTTTTCCHHHHTCSCEEETTEEECCCSSSCSCCBTTSCC
T ss_pred eeEeCCcchhhhhhHHhcchhhHHHHhcCCCeEEECCcccccccccCCcccccccC
Confidence 69999999999999999999999999999999999999999999999999999998
|
| >d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Transcription factor inhibitor I-kappa-B-beta, IKBB species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.85 E-value=3.9e-21 Score=193.83 Aligned_cols=201 Identities=18% Similarity=0.105 Sum_probs=156.8
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhh---hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADV---ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPL 689 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~---~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql 689 (964)
+.+|+++|... .....++.+++.+++...+ +..|.+++|.+| .+.+..+.+|+.++......+
T Consensus 9 G~t~Lh~A~~~--~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d----------- 75 (255)
T d1oy3d_ 9 GDTALHLAVIH--QHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAE----------- 75 (255)
T ss_dssp CCCHHHHHHHT--TCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCC-----------
T ss_pred CCCHHHHHHHc--CCHHHHHHHHHcCCCcccccCcCCCCCCccchHHhhcccccccccccccccccccc-----------
Confidence 37899998866 5667778888887764433 357899999998 588888888888774322222
Q ss_pred cccchHHHHHHHcCchHHHHHHhhhhccCcccCCC-----------------------------C---------Cchhhc
Q 002122 690 RRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE-----------------------------H---------PSLDLA 731 (964)
Q Consensus 690 ~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~-----------------------------~---------~~le~~ 731 (964)
...++||++|+..++.++++.|++.......+... . .....+
T Consensus 76 ~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d 155 (255)
T d1oy3d_ 76 RGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAEN 155 (255)
T ss_dssp TTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCC
T ss_pred cccchhhhhhhccCchHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCccccccc
Confidence 23478999999999999999998754221110000 0 000123
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCC-cCCCCCChHHHHHHhhCCCHHHHHH
Q 002122 732 LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPD-VIGPAGLTPIHIAAGKDGSEDVLDA 810 (964)
Q Consensus 732 l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn-~~d~~G~TPLHiAA~~~G~~dVV~l 810 (964)
..|.||||+||+.++.++|++||+. ++ +++ ..+..|.||||+|+. .|+.++|++
T Consensus 156 ~~g~TpLh~A~~~~~~~~v~~Ll~~-------~~-----------------~~~~~~~~~g~TpL~~A~~-~~~~~~v~~ 210 (255)
T d1oy3d_ 156 YDGHTPLHVAVIHKDAEMVRLLRDA-------GA-----------------DLNKPEPTCGRTPLHLAVE-AQAASVLEL 210 (255)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHH-------TC-----------------CTTCCCTTTCCCHHHHHHH-TTCHHHHHH
T ss_pred ccCcccccccccccccccccchhcc-------cc-----------------ccccccccccccccccccc-ccHHHHHHH
Confidence 4588999999999999999999998 54 333 456789999999999 999999999
Q ss_pred hhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 811 LTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 811 LL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
|+++ ||+++.+|..|.||||+|+.+||.+++++|.++||+.+
T Consensus 211 Ll~~------gadin~~d~~g~t~L~~A~~~~~~~i~~~Ll~~Ga~~~ 252 (255)
T d1oy3d_ 211 LLKA------GADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEP 252 (255)
T ss_dssp HHHT------TCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCC
T ss_pred HHHC------CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC
Confidence 9999 99999999999999999999999999999999999865
|
| >d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=2.1e-19 Score=180.64 Aligned_cols=189 Identities=16% Similarity=0.117 Sum_probs=144.0
Q ss_pred eeecchhhhhHHHHHHHHhhhcCcch-hhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchH
Q 002122 618 FIVAEEDVCSEIRMLESALEFNRTDA-DVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWL 695 (964)
Q Consensus 618 ~LVad~~iCsEI~~LE~~le~~a~~~-~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~l 695 (964)
+|+...+..+.++.+...+.....+. ..+..|.+++|.+| .+....+-+++........ ......++
T Consensus 5 ~~~~~~a~~G~~~~v~~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~-----------~~~~~~~~ 73 (223)
T d1uoha_ 5 LMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND-----------KDDAGWSP 73 (223)
T ss_dssp SHHHHHHHTTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCC-----------CCTTCCCH
T ss_pred HHHHHHHHhCCHHHHHHHHHhCCCcCcCcCCCCCCHHHHHHHhhhhccccccccccccccc-----------cccccccc
Confidence 45666677788888987776554333 33667999999998 4666556666555432111 11223678
Q ss_pred HHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccc
Q 002122 696 IEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDG 775 (964)
Q Consensus 696 L~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~ 775 (964)
++.++..++.++++.|++...+. + ..+..|.||||+|+..|+.+++++|+++ |+
T Consensus 74 ~~~~~~~~~~~i~~~Ll~~~~d~----~-----~~d~~g~tpL~~A~~~~~~e~~~~Ll~~-------g~---------- 127 (223)
T d1uoha_ 74 LHIAASAGRDEIVKALLGKGAQV----N-----AVNQNGCTPLHYAASKNRHEIAVMLLEG-------GA---------- 127 (223)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCT----T-----CCCTTCCCHHHHHHHHTCHHHHHHHHHT-------TC----------
T ss_pred ccccccccccchhHHHhccCcee----E-----eeCCCCCchhhHHHHcCCHHHHHHHHHC-------CC----------
Confidence 99999999999999999854431 1 1355688999999999999999999998 76
Q ss_pred cccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 002122 776 VHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKIN 855 (964)
Q Consensus 776 a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~a 855 (964)
+++.++..|.||||+|+. .++.+++++|++. +++++.+|.+|.||||+|+.+|+.+++++|.++++
T Consensus 128 -------d~~~~~~~~~t~L~~a~~-~~~~~~~~~L~~~------~~~i~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Ga 193 (223)
T d1uoha_ 128 -------NPDAKDHYEATAMHRAAA-KGNLKMIHILLYY------KASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGA 193 (223)
T ss_dssp -------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred -------CCCCcCCCCCccchhhhh-cCCcchhhhhccc------cceeeeccCCCCceeccccccCcHHHHHHHHHCCC
Confidence 778888888888888888 8888888888888 88888888888888888888888888888888876
Q ss_pred cC
Q 002122 856 KR 857 (964)
Q Consensus 856 k~ 857 (964)
+.
T Consensus 194 d~ 195 (223)
T d1uoha_ 194 SI 195 (223)
T ss_dssp CS
T ss_pred CC
Confidence 54
|
| >d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=9.5e-20 Score=183.13 Aligned_cols=185 Identities=15% Similarity=0.124 Sum_probs=145.0
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
+.+|++.|... +.+..++.+++...........+.+..+..+ .+.+..+.+|+.++...... ....
T Consensus 37 G~TpLh~Aa~~--g~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~d~~~~-----------d~~g 103 (223)
T d1uoha_ 37 SRTALHWACSA--GHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAV-----------NQNG 103 (223)
T ss_dssp SCCHHHHHHHH--TCHHHHHHHHHHTCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCC-----------CTTC
T ss_pred CCCHHHHHHHh--hhhcccccccccccccccccccccccccccccccccchhHHHhccCceeEee-----------CCCC
Confidence 47899998865 4455566666666554444445566666666 35666677777766322111 1235
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.+|||+|+..|+.+++++|++.+++.+ ..+..|.||||+|+..++.+++++|+.. |.
T Consensus 104 ~tpL~~A~~~~~~e~~~~Ll~~g~d~~---------~~~~~~~t~L~~a~~~~~~~~~~~L~~~-------~~------- 160 (223)
T d1uoha_ 104 CTPLHYAASKNRHEIAVMLLEGGANPD---------AKDHYEATAMHRAAAKGNLKMIHILLYY-------KA------- 160 (223)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred CchhhHHHHcCCHHHHHHHHHCCCCCC---------CcCCCCCccchhhhhcCCcchhhhhccc-------cc-------
Confidence 789999999999999999999654321 1345688999999999999999999988 65
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
++|..|..|.||||+||. .|+.++|++|++. ||+++.+|.+|+||||+|+ .||.+++++|++
T Consensus 161 ----------~i~~~d~~g~TpL~~Aa~-~g~~~~v~~LL~~------Gad~~~~d~~g~tpl~~A~-~~~~~i~~~Ll~ 222 (223)
T d1uoha_ 161 ----------STNIQDTEGNTPLHLACD-EERVEEAKLLVSQ------GASIYIENKEEKTPLQVAK-GGLGLILKRMVE 222 (223)
T ss_dssp ----------CSCCCCTTCCCHHHHHHH-TTCHHHHHHHHHT------TCCSCCCCTTSCCHHHHCC-TTHHHHHHHHHC
T ss_pred ----------eeeeccCCCCceeccccc-cCcHHHHHHHHHC------CCCCCCCCCCCCCHHHHHH-CCCHHHHhcccC
Confidence 889999999999999999 9999999999999 9999999999999999995 799999998864
|
| >d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Pyk2-associated protein beta species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.78 E-value=1.7e-18 Score=168.23 Aligned_cols=130 Identities=22% Similarity=0.147 Sum_probs=108.8
Q ss_pred HHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHc---CCHHHHHHHhccCCCccccccCccccc
Q 002122 695 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRK---NSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 695 lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~---g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
.|+-|++.+....+..++..+.+..... .....+..|.||||+|++. ++.++|++||++ |+
T Consensus 9 ~L~~Av~~~dl~~l~~~~~~g~d~~~~~---~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~-------ga------ 72 (154)
T d1dcqa1 9 SLCEAVKTRDIFGLLQAYADGVDLTEKI---PLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN-------SG------ 72 (154)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTSBC---CCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH-------CS------
T ss_pred HHHHHHHhCCHHHHHHHHHcCCCcCCCC---CcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHc-------CC------
Confidence 5678888888888877776544322110 0111244588999999984 678999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
++|.+|..|+||||+|+. .|+.++|++|+++ ||+++.+|.+|.||||+|+.+||.+++++|.
T Consensus 73 -----------din~~d~~g~TpLh~A~~-~~~~~~v~~Ll~~------gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~ 134 (154)
T d1dcqa1 73 -----------NLDKQTGKGSTALHYCCL-TDNAECLKLLLRG------KASIEIANESGETPLDIAKRLKHEHCEELLT 134 (154)
T ss_dssp -----------CTTCCCTTCCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------Chhhhhhhhccccccccc-ccccccccccccc------CccccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 899999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcCC
Q 002122 852 KKINKRP 858 (964)
Q Consensus 852 ~k~ak~~ 858 (964)
+.++.+.
T Consensus 135 ~~~~~~~ 141 (154)
T d1dcqa1 135 QALSGRF 141 (154)
T ss_dssp HHHTTCC
T ss_pred HhCCCCC
Confidence 9887654
|
| >d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p16ink4A species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=1.7e-19 Score=167.75 Aligned_cols=119 Identities=24% Similarity=0.244 Sum_probs=105.3
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++||+|+.+|+.++|+.||+.+++.+. .+..|.|+||.|+ .|+.++|++|+++ |+
T Consensus 4 ~~~L~~Aa~~G~~~~v~~Ll~~gad~n~---------~~~~g~t~l~~a~-~g~~~~v~~Ll~~-------ga------- 59 (125)
T d1bi7b_ 4 ADWLATAAARGRVEEVRALLEAGANPNA---------PNSYGRRPIQVMM-MGSARVAELLLLH-------GA------- 59 (125)
T ss_dssp TTHHHHHHHHTCHHHHHHHHTTTCCTTC---------CCSSSCCTTTSSC-TTCHHHHHHHHTT-------TC-------
T ss_pred hhHHHHHHHCCCHHHHHHHHHcCCcccc---------ccccccccccccc-ccccccccccccc-------cc-------
Confidence 4689999999999999999996553221 2456889999775 6999999999999 77
Q ss_pred ccccccccccCCCcCCCCCC-hHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGL-TPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~-TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
++|..+..|. ||||+|+. .|+.++|++|+++ |++++.+|..|+||||+|+++||.+++++|.
T Consensus 60 ----------~~~~~~~~~~~~~L~~A~~-~g~~~~v~~Ll~~------ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Ll 122 (125)
T d1bi7b_ 60 ----------EPNCADPATLTRPVHDAAR-EGFLDTLVVLHRA------GARLDVRDAWGRLPVDLAEELGHRDVARYLR 122 (125)
T ss_dssp ----------CCCCCCTTTCCCHHHHHHH-HTCHHHHHHHHHH------TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHS
T ss_pred ----------ccccccccccccccccccc-ccccccccccccc------ccccccccCCCCCHHHHHHHcCCHHHHHHHH
Confidence 7888888776 69999999 9999999999999 9999999999999999999999999999986
Q ss_pred H
Q 002122 852 K 852 (964)
Q Consensus 852 ~ 852 (964)
.
T Consensus 123 s 123 (125)
T d1bi7b_ 123 A 123 (125)
T ss_dssp S
T ss_pred h
Confidence 4
|
| >d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.77 E-value=1.1e-18 Score=172.86 Aligned_cols=190 Identities=18% Similarity=0.097 Sum_probs=113.8
Q ss_pred cceeecchhhhhHHHHHHHHhhhcCc-chhhhhcCccccHHHHH-HHHHHHhhhhcccccccccCCCCCCCCCcCccccc
Q 002122 616 FPFIVAEEDVCSEIRMLESALEFNRT-DADVERFGKIDTKNQAM-DFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFK 693 (964)
Q Consensus 616 fP~LVad~~iCsEI~~LE~~le~~a~-~~~~~e~g~~~~h~~al-~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k 693 (964)
+|++.|... +.+..++.+++.... ....+..|.+++|.++. +....+.+||+++......+.. .....
T Consensus 2 ~pLh~A~~~--g~~~~v~~Ll~~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~--------~~~~~ 71 (229)
T d1ixva_ 2 YPLHQACME--NEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYP--------DDSGW 71 (229)
T ss_dssp CHHHHHHHH--TCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCC--------CTTSC
T ss_pred HhHHHHHHc--CCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHcCCccccchhhhhhccccccccc--------ccccc
Confidence 566666544 566667666664332 22224578888888883 7777777887765422222111 12235
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccc
Q 002122 694 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 773 (964)
Q Consensus 694 ~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv 773 (964)
+++++++..+..++++.++........ ...+..+.|+|+.++..++.+++++|+.. |.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~-------~~-------- 129 (229)
T d1ixva_ 72 TPFHIACSVGNLEVVKSLYDRPLKPDL-------NKITNQGVTCLHLAVGKKWFEVSQFLIEN-------GA-------- 129 (229)
T ss_dssp CHHHHHHHHTCHHHHHHHHSSSSCCCT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC--------
T ss_pred ccccccccccccccccccccccccccc-------cccccccccccccccccchhhhhhhhhhh-------cc--------
Confidence 677777777777777766654332111 11233355677777777777777666666 33
Q ss_pred cccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 774 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 774 ~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
..+..+..|.||||+|+. .|+.+++++|++.. ..++|.+|.+|.||||+|+.+|+.+++++|..
T Consensus 130 ---------~~~~~~~~g~t~l~~a~~-~~~~~~~~~Ll~~~-----~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~ 193 (229)
T d1ixva_ 130 ---------SVRIKDKFNQIPLHRAAS-VGSLKLIELLCGLG-----KSAVNWQDKQGWTPLFHALAEGHGDAAVLLVE 193 (229)
T ss_dssp ---------CSCCCCTTSCCHHHHHHH-HTCHHHHHHHHTTT-----CCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ---------cccccCCCCCCccchhhh-cccccccccccccc-----cccccccccccCCchhhhcccccHHHHHHHHH
Confidence 445556666677777766 66666666666651 25666666667777777777777777766554
|
| >d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Transcription factor inhibitor I-kappa-B-beta, IKBB species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.76 E-value=2.2e-18 Score=173.45 Aligned_cols=188 Identities=18% Similarity=0.087 Sum_probs=136.2
Q ss_pred hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC
Q 002122 646 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE 724 (964)
Q Consensus 646 ~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~ 724 (964)
+++|.+++|.+| -+....+-+|+.++......+ .+....++|||+|+.+|+.++|++||+.+++.+.
T Consensus 6 ~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~--------~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~---- 73 (255)
T d1oy3d_ 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLD--------LQNDLGQTALHLAAILGEASTVEKLYAAGAGVLV---- 73 (255)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGG--------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC----
T ss_pred CcCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc--------CcCCCCCCccchHHhhcccccccccccccccccc----
Confidence 467999999999 477777788887664322121 1122357899999999999999999996543221
Q ss_pred CCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc-------------cc----------ccccccccc
Q 002122 725 HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK-------------AL----------VDGVHKGFL 781 (964)
Q Consensus 725 ~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~-------------~l----------v~~a~~~y~ 781 (964)
.+..|.||||+|+..++.+++++|++.......+....... .. .......+.
T Consensus 74 -----~d~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (255)
T d1oy3d_ 74 -----AERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWR 148 (255)
T ss_dssp -----CCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGG
T ss_pred -----cccccchhhhhhhccCchHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcC
Confidence 35568999999999999999999997642211000000000 00 000112223
Q ss_pred cCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccC-CCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 782 FRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNAR-DSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 782 fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinar-D~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
.+.|.++..|.||||+|+. .|+.++|++|++. +++.+.. +..|.||||+|++.|+.+++++|.+++++.
T Consensus 149 ~~in~~d~~g~TpLh~A~~-~~~~~~v~~Ll~~------~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadi 218 (255)
T d1oy3d_ 149 LQLEAENYDGHTPLHVAVI-HKDAEMVRLLRDA------GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADP 218 (255)
T ss_dssp GGTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHH------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred cccccccccCccccccccc-ccccccccchhcc------cccccccccccccccccccccccHHHHHHHHHHCCCCC
Confidence 5667899999999999999 9999999999999 8887764 678999999999999999999999987654
|
| >d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 53BP2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=7.5e-19 Score=164.67 Aligned_cols=123 Identities=20% Similarity=0.161 Sum_probs=107.6
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccc
Q 002122 694 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 773 (964)
Q Consensus 694 ~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv 773 (964)
.+|+.|+..|+.++|+.||+.+++.+. .+..|+||||+||..|+.+++++|+++ |+
T Consensus 3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~---------~d~~g~t~Lh~A~~~~~~~~~~~ll~~-------g~-------- 58 (130)
T d1ycsb1 3 ALLLDSSLEGEFDLVQRIIYEVDDPSL---------PNDEGITALHNAVCAGHTEIVKFLVQF-------GV-------- 58 (130)
T ss_dssp HHHHHHHHHTCHHHHHHHTSTTSSCCC---------CCTTSCCHHHHHHHHTCHHHHHHHHHH-------TC--------
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCccc---------ccccccccccccccccccccccccccc-------cc--------
Confidence 489999999999999999996543221 345699999999999999999999999 77
Q ss_pred cccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCC-CCCCHHHHH--HHcCCHHHHHHH
Q 002122 774 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDS-SGSTPEDYA--RLRGHYSYIHLV 850 (964)
Q Consensus 774 ~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~-~G~TPLh~A--~~rGh~svv~LL 850 (964)
++|..|.+|+||||+|+. .|+.++|++|+++ ||+++++|. .|.||+++| ...||.+++++|
T Consensus 59 ---------~~~~~d~~g~tpLh~A~~-~g~~~~v~~Ll~~------ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L 122 (130)
T d1ycsb1 59 ---------NVNAADSDGWTPLHCAAS-CNNVQVCKFLVES------GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122 (130)
T ss_dssp ---------CTTCCCTTCCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHH
T ss_pred ---------ccccccccCcccccccch-hhHHHHHHHHHHc------CCCcccccCCCCCCHHHHHHHHHcChHHHHHHH
Confidence 889999999999999999 9999999999999 999999885 699998776 567999999999
Q ss_pred HHhhhc
Q 002122 851 QKKINK 856 (964)
Q Consensus 851 ~~k~ak 856 (964)
.....+
T Consensus 123 ~~~~~~ 128 (130)
T d1ycsb1 123 YGVQEK 128 (130)
T ss_dssp HHHHHH
T ss_pred HhHHHh
Confidence 876544
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=6.9e-18 Score=179.72 Aligned_cols=64 Identities=27% Similarity=0.349 Sum_probs=61.0
Q ss_pred CCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 002122 783 RPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKK 853 (964)
Q Consensus 783 dpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k 853 (964)
++|.+|..|+||||+|+. .|+.++|++|+++ ||++|++|.+|.||||+|+++||.++|++|...
T Consensus 322 ~in~~d~~G~T~Lh~A~~-~g~~~iv~~Ll~~------GAd~n~~d~~G~t~L~~A~~~~~~~iv~~L~~~ 385 (408)
T d1n11a_ 322 DVNAKTKLGYSPLHQAAQ-QGHTDIVTLLLKN------GASPNEVSSDGTTPLAIAKRLGYISVTDVLKVV 385 (408)
T ss_dssp CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred cccccCCCCCCHHHHHHH-cCCHHHHHHHHHC------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 789999999999999999 9999999999999 999999999999999999999999999988443
|
| >d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Lin-12 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.74 E-value=5.2e-18 Score=171.60 Aligned_cols=198 Identities=12% Similarity=0.083 Sum_probs=148.1
Q ss_pred CCcceeecch----hhhhHHH--HHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCC
Q 002122 614 TFFPFIVAEE----DVCSEIR--MLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDL 686 (964)
Q Consensus 614 ~ffP~LVad~----~iCsEI~--~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l 686 (964)
+.+|+++|.. +++..+- ..+..++.|++....+..|.+++|.++ .+.+.-+.|||+++......+
T Consensus 33 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n~~~-------- 104 (277)
T d2fo1e1 33 NRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYN-------- 104 (277)
T ss_dssp CCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC--------
T ss_pred CccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCccccCCCCCeeecccccccccccccccccccccccccc--------
Confidence 4688888763 4444431 224456677766656678999999999 587888899998875322222
Q ss_pred cCccccchHHHHHHHcCchHHHHHHhhhhccC-cc---cCCCC----------------------------------Cch
Q 002122 687 FPLRRFKWLIEFSMDHEWCAVVKKLLHILLDG-TV---SLGEH----------------------------------PSL 728 (964)
Q Consensus 687 ~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~-~v---d~g~~----------------------------------~~l 728 (964)
...+++|++|+..++..+++.++...... .+ +.... ...
T Consensus 105 ---~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (277)
T d2fo1e1 105 ---KSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKD 181 (277)
T ss_dssp ---TTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTS
T ss_pred ---ccccccccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhccccccccccccccccccccccccccccc
Confidence 23578999999999999998886643110 00 00000 000
Q ss_pred hhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHH
Q 002122 729 DLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVL 808 (964)
Q Consensus 729 e~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV 808 (964)
..+..|.|+||+|+..++.+++++++... +. +.+.+|..|.||||+|+. .|+.++|
T Consensus 182 ~~~~~g~t~L~~~~~~~~~~~~~~~l~~~------~~-----------------~~~~~d~~g~tpL~~A~~-~g~~~iv 237 (277)
T d2fo1e1 182 SEKYKGRTALHYAAQVSNMPIVKYLVGEK------GS-----------------NKDKQDEDGKTPIMLAAQ-EGRIEVV 237 (277)
T ss_dssp SSSCCCCCTHHHHHSSCCHHHHHHHHHHS------CC-----------------CTTCCCTTCCCHHHHHHH-HTCHHHH
T ss_pred ccccCCCCccccccccccccccccccccc------cc-----------------cccccCCCCCCHHHHHHH-cCCHHHH
Confidence 01235789999999999999999877652 33 677889999999999999 9999999
Q ss_pred HHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 809 DALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 809 ~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
++|+++ ||++|++|.+|.||||+|+++||.+++++|.+
T Consensus 238 ~~Ll~~------gadin~~d~~G~T~L~~A~~~~~~~iv~lL~~ 275 (277)
T d2fo1e1 238 MYLIQQ------GASVEAVDATDHTARQLAQANNHHNIVDIFDR 275 (277)
T ss_dssp HHHHHT------TCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHC------cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999 99999999999999999999999999999985
|
| >d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p19ink4D species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=7.3e-18 Score=160.20 Aligned_cols=150 Identities=23% Similarity=0.222 Sum_probs=121.2
Q ss_pred ccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhh
Q 002122 652 DTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDL 730 (964)
Q Consensus 652 ~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~ 730 (964)
.++.+| -+.+..+.++|+.... ... .......+|||+|+. ++.++++.||+...+.+ . .
T Consensus 5 ~L~~Aa~~g~~~~vk~lL~~~~~--~~n--------~~d~~g~t~L~~A~~-~~~~~v~~Ll~~~~~~~----~-----~ 64 (156)
T d1bd8a_ 5 RLSGAAARGDVQEVRRLLHRELV--HPD--------ALNRFGKTALQVMMF-GSTAIALELLKQGASPN----V-----Q 64 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC--CTT--------CCCTTSCCHHHHSCT-TCHHHHHHHHHTTCCTT----C-----C
T ss_pred HHHHHHHcCCHHHHHHHHHhCCC--CCC--------ccCCCCCcccccccc-ccccccccccccccccc----c-----c
Confidence 366777 4788888888875421 011 111234789999975 77899999998644321 1 2
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHH
Q 002122 731 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDA 810 (964)
Q Consensus 731 ~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~l 810 (964)
...|.+||+.|+..++.++++++++. |+ ++|.+|..|.||||+|+. .|+.+++++
T Consensus 65 ~~~~~~~l~~~~~~~~~~~~~~~l~~-------~~-----------------~~n~~~~~~~t~L~~A~~-~~~~~i~~~ 119 (156)
T d1bd8a_ 65 DTSGTSPVHDAARTGFLDTLKVLVEH-------GA-----------------DVNVPDGTGALPIHLAVQ-EGHTAVVSF 119 (156)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CSCCCCTTSCCHHHHHHH-HTCHHHHHH
T ss_pred cccccccccccccccccccccccccc-------cc-----------------ccccccCCCCeeeccccc-ccccccccc
Confidence 34578999999999999999999999 66 789999999999999999 999999998
Q ss_pred hhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 002122 811 LTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKK 853 (964)
Q Consensus 811 LL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k 853 (964)
|+ . +++++.+|.+|+||||+|+.+||.+++++|+++
T Consensus 120 L~-~------~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h 155 (156)
T d1bd8a_ 120 LA-A------ESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HH-T------TSCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred cc-c------cccccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence 87 6 789999999999999999999999999999865
|
| >d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myotrophin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.74 E-value=4.7e-19 Score=163.45 Aligned_cols=106 Identities=16% Similarity=0.069 Sum_probs=94.7
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccc
Q 002122 694 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 773 (964)
Q Consensus 694 ~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv 773 (964)
+||++|+++|+.++|+.||+.+++.+ ..+..|+||||+|+..|+.+++++|+++ |+
T Consensus 4 tpL~~A~~~g~~~~v~~Ll~~g~d~n---------~~~~~g~t~lh~A~~~~~~~~~~~ll~~-------g~-------- 59 (118)
T d1myoa_ 4 KEFMWALKNGDLDEVKDYVAKGEDVN---------RTLEGGRKPLHYAADCGQLEILEFLLLK-------GA-------- 59 (118)
T ss_dssp HHHHHHHHTTCHHHHHHHHTTTCCCC---------CCSSSSCCTTHHHHHHSTTTHHHHHHHS-------SC--------
T ss_pred hHHHHHHHCCCHHHHHHHHHhhhccc---------cccccccccccccccccccccccccccc-------cc--------
Confidence 68999999999999999998654321 1345688999999999999999999999 77
Q ss_pred cccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHH
Q 002122 774 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYAR 839 (964)
Q Consensus 774 ~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~ 839 (964)
++|.+|..|.||||+|+. .|+.++|++|+++ ||+++.+|..|.||||+|.
T Consensus 60 ---------din~~d~~g~tpLh~A~~-~~~~~~v~~Ll~~------Gad~~~~d~~G~t~l~~a~ 109 (118)
T d1myoa_ 60 ---------DINAPDKHHITPLLSAVY-EGHVSCVKLLLSK------GADKTVKGPDGLTALEATD 109 (118)
T ss_dssp ---------TTTCCSSSCSCHHHHHHT-TTCCHHHHHHHTT------CCCSSSSSSSTCCCCCTCS
T ss_pred ---------eeeecccccccchhhhhh-cCchhhhhhhhcc------cccceeeCCCCCCHHHHHh
Confidence 889999999999999999 9999999999999 9999999999999999984
|
| >d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myosin phosphatase targeting subunit 1, MYPT1 species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.74 E-value=3.2e-18 Score=175.50 Aligned_cols=207 Identities=14% Similarity=0.094 Sum_probs=124.8
Q ss_pred cceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHHH-HHHHHHhhhhcccccccccCCCCCCCCCcCccccch
Q 002122 616 FPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQAM-DFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKW 694 (964)
Q Consensus 616 fP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~al-~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~ 694 (964)
.|+|.|... +.++.++.+++.|++....+.+|.+++|.++. +.+..+.+|+.+........ ....+
T Consensus 42 t~l~~A~~~--G~~~~v~~Ll~~Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~-----------~~~~~ 108 (291)
T d1s70b_ 42 AVFLAACSS--GDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPD-----------NEGWI 108 (291)
T ss_dssp HHHHHHHHH--TCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTSCC
T ss_pred hHHHHHHHc--CCHHHHHHHHHCCCCCCccCCCCCcHHHHHHhcCCceeeeeeccccccccccc-----------ccccc
Confidence 566766654 88999999999998766556789999999994 77788889988764221111 12367
Q ss_pred HHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCcc----cccc----C
Q 002122 695 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEV----SDRL----G 766 (964)
Q Consensus 695 lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~----~dGa----~ 766 (964)
+|++|+..++.++++.|++....... .+..+.+++++|+..++.++++.|+....... ..+. .
T Consensus 109 ~L~~a~~~~~~~~~~~l~~~~~~~~~---------~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 179 (291)
T d1s70b_ 109 PLHAAASCGYLDIAEYLISQGAHVGA---------VNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLR 179 (291)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTC---------CCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred cccccccccccchhhcccccCccccc---------ccccCccccccccccccchhccccccccccccccccccccccccc
Confidence 99999999999999999986432111 13345566666666666666665553210000 0000 0
Q ss_pred ccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHH
Q 002122 767 SENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSY 846 (964)
Q Consensus 767 ~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~sv 846 (964)
.....+... .......+..|.||||+|+. .|+.++++.|++. |+++|.+|.+|.||||+|+..||.++
T Consensus 180 ~~~~~~~~~-----~~~~~~~~~~g~t~L~~a~~-~~~~~~~~~Ll~~------g~din~~~~~g~TpL~~A~~~g~~~i 247 (291)
T d1s70b_ 180 DARQWLNSG-----HINDVRHAKSGGTALHVAAA-KGYTEVLKLLIQA------RYDVNIKDYDGWTPLHAAAHWGKEEA 247 (291)
T ss_dssp HHHHHHHHT-----CCCCCCCTTTCCCHHHHHHH-HTCHHHHHHHHTT------TCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred cchhhhccc-----ccccccccCCCCChhhHHHH-cCChhhhcccccc------eecccccccCCCCHHHHHHHcCCHHH
Confidence 000000000 00223344556666666666 6666666666666 66666666666666666666666666
Q ss_pred HHHHHHhhhc
Q 002122 847 IHLVQKKINK 856 (964)
Q Consensus 847 v~LL~~k~ak 856 (964)
|++|.+++++
T Consensus 248 v~lLl~~Gad 257 (291)
T d1s70b_ 248 CRILVENLCD 257 (291)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHHCCCC
Confidence 6666666553
|
| >d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: GA bindinig protein (GABP) beta 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.74 E-value=1.1e-17 Score=156.68 Aligned_cols=62 Identities=16% Similarity=0.139 Sum_probs=59.4
Q ss_pred CCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 783 RPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 783 dpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
+++.+|..|.||||+|+. .|+.++|++|+++ |++++.+|..|.||||+|+.+||.+++++|+
T Consensus 92 ~~~~~~~~g~T~L~~A~~-~g~~~iv~~ll~~------gad~~~~d~~g~Tpl~~A~~~g~~eiv~lL~ 153 (153)
T d1awcb_ 92 DVNAKDMLKMTALHWATE-HNHQEVVELLIKY------GADVHTQSKFCKTAFDISIDNGNEDLAEILQ 153 (153)
T ss_dssp CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHC
T ss_pred ccccccccCchHHHhhhh-cchhheeeecccc------ccCCcccCCCCCCHHHHHHHcCCHHHHHhCc
Confidence 678889999999999999 9999999999999 9999999999999999999999999999884
|
| >d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: RNase L, 2-5a-dependent ribonuclease species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=4.4e-17 Score=165.35 Aligned_cols=232 Identities=14% Similarity=-0.040 Sum_probs=151.6
Q ss_pred hhhhhHHHHHHHHhhhcCcchhh-hhcCccccHHHHH-HHHHHHhhhhcccccccccCCCC-------------------
Q 002122 623 EDVCSEIRMLESALEFNRTDADV-ERFGKIDTKNQAM-DFIHEIGWLFHRSQSKSRLGHLD------------------- 681 (964)
Q Consensus 623 ~~iCsEI~~LE~~le~~a~~~~~-~e~g~~~~h~~al-~fL~EIGWLLqr~~~~~~~~~~d------------------- 681 (964)
+...+.++.++.+++.|++.... +..|.+++|.+|. +....+.+|++............
T Consensus 12 Ai~~~~~e~vk~Ll~~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (285)
T d1wdya_ 12 AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLF 91 (285)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhccccccccccccccchhhHHHhhcCCccccchh
Confidence 44558888999999988765433 3467888988773 54445555555443211110000
Q ss_pred --CCC-CCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCC-CchhhccCCCcHHHHHHHcCCHHHHHHHhccC
Q 002122 682 --PNT-DLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEH-PSLDLALTELGLLHRAVRKNSRPLVDLLLRFV 757 (964)
Q Consensus 682 --~~l-~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~-~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~ 757 (964)
... .........+.|++|+..++..+++.++....+........ ........|.||||+|+++|+.+++++||+..
T Consensus 92 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~ 171 (285)
T d1wdya_ 92 LSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEM 171 (285)
T ss_dssp HHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTS
T ss_pred hhhcccccccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHHHHHHcCCHHHHHHHHhcc
Confidence 000 00111224568999999999999988887554332211111 11112445889999999999999999999752
Q ss_pred C-Ccc---ccccCccccccccccccc----------cccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccc
Q 002122 758 P-LEV---SDRLGSENKALVDGVHKG----------FLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAW 823 (964)
Q Consensus 758 p-~~~---~dGa~~~~~~lv~~a~~~----------y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAd 823 (964)
. +.. ..|..+............ ...++|.++..|.||||+|+. .|+.++|++|++.. |++
T Consensus 172 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a~~-~~~~~~v~~lL~~~-----g~d 245 (285)
T d1wdya_ 172 GADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVE-KKHLGLVQRLLEQE-----HIE 245 (285)
T ss_dssp CCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHH-TTCHHHHHHHHHSS-----SCC
T ss_pred CCCcccccCCCCcccccccccccchHHHHHHHHHHHCCCCCCccCCCCCCccchhhh-cCcHHHHHHHHHcC-----CCC
Confidence 1 100 011100000111111100 013678889999999999999 99999999999742 899
Q ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCCCC
Q 002122 824 KNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPNG 860 (964)
Q Consensus 824 inarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~~~ 860 (964)
+|.+|.+|.||||+|+++||.+++++|.++||+...+
T Consensus 246 in~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~ 282 (285)
T d1wdya_ 246 INDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG 282 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCS
T ss_pred CcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcc
Confidence 9999999999999999999999999999999987643
|
| >d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: I-kappa-B-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=2e-18 Score=172.25 Aligned_cols=175 Identities=13% Similarity=-0.030 Sum_probs=135.5
Q ss_pred hhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhh
Q 002122 637 EFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHIL 715 (964)
Q Consensus 637 e~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l 715 (964)
..++.....+..|++++|.+| -+....+.+|+.++......+ ....++|++|+.++..++++.|+..+
T Consensus 27 ~~~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d-----------~~g~t~l~~~~~~~~~~~~~~l~~~~ 95 (221)
T d1iknd_ 27 GDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRD-----------FRGNTPLHLACEQGCLASVGVLTQSC 95 (221)
T ss_dssp --CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCC-----------TTCCCHHHHHHHHTCHHHHHHHHHST
T ss_pred hCCCCcccCCCCCCccccccccccccccccccccccccccccc-----------cccccccccccccccccccchhhhhc
Confidence 334443333567999999999 477888888888764322221 23467999999999999999999865
Q ss_pred ccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcC-CCCCChH
Q 002122 716 LDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVI-GPAGLTP 794 (964)
Q Consensus 716 ~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~-d~~G~TP 794 (964)
...... .........|.||||.|+..++.+++++|+.. |+ ..+.. +..|.||
T Consensus 96 ~~~~~~---~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~-------~~-----------------~~~~~~~~~G~T~ 148 (221)
T d1iknd_ 96 TTPHLH---SILKATNYNGHTCLHLASIHGYLGIVELLVSL-------GA-----------------DVNAQEPCNGRTA 148 (221)
T ss_dssp TTTSSS---CGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH-------TC-----------------CTTCCCTTTCCCH
T ss_pred cccccc---ccccccccccchhhhHHhhcCChhheeeeccc-------Cc-----------------ccccccccCCCCc
Confidence 432211 11111234578999999999999999999988 55 34443 4679999
Q ss_pred HHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhc
Q 002122 795 IHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINK 856 (964)
Q Consensus 795 LHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak 856 (964)
||+|+. .|+.+++++|+++ |||++++|..|.||||+|+.+++.+++++|.+...+
T Consensus 149 L~~A~~-~g~~~~v~~Ll~~------gad~~~~~~~G~tpl~~A~~~~~~~~~~~l~~~~~~ 203 (221)
T d1iknd_ 149 LHLAVD-LQNPDLVSLLLKC------GADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203 (221)
T ss_dssp HHHHHH-TTCHHHHHHHHTT------TCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred cccccc-cccHHHHHHHHhc------CCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCc
Confidence 999999 9999999999999 999999999999999999999999999999887654
|
| >d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Neurogenic locus notch receptor domain species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.73 E-value=3.4e-17 Score=159.84 Aligned_cols=179 Identities=19% Similarity=0.177 Sum_probs=122.3
Q ss_pred HHHHhhhcCcchh-hhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCC----------------------CCCC-
Q 002122 632 LESALEFNRTDAD-VERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDP----------------------NTDL- 686 (964)
Q Consensus 632 LE~~le~~a~~~~-~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~----------------------~l~l- 686 (964)
+..+++.|++... .+..|.+++|.+| .+.+..+.||+..+......+.... ....
T Consensus 5 v~~Ll~~g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (209)
T d1ot8a_ 5 ISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLN 84 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTCCTT
T ss_pred HHHHHHCCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence 3445555665433 2566777888777 4666666677765532211111100 0000
Q ss_pred cCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccC
Q 002122 687 FPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLG 766 (964)
Q Consensus 687 ~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~ 766 (964)
..........+.+.......+.+.|+....+ . ...+..|.|+||.|+..+...+++.|+.. +.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~----~-----~~~~~~~~t~l~~~~~~~~~~~~~~l~~~-------~~- 147 (209)
T d1ot8a_ 85 ARMHDGTTPLILAARLAIEGMVEDLITADAD----I-----NAADNSGKTALHWAAAVNNTEAVNILLMH-------HA- 147 (209)
T ss_dssp CCCTTCCCHHHHHHHTTCTTHHHHHHHTTCC----T-----TCBCTTSCBHHHHHHHTTCHHHHHHHHHT-------TC-
T ss_pred cccccccccccccccccchhhhhhhhhhccc----c-----cccCCCCCCcchhhcccCcceeeeeeccc-------cc-
Confidence 0000112344444444445555555442211 0 01245578999999999999999999999 55
Q ss_pred ccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHH
Q 002122 767 SENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSY 846 (964)
Q Consensus 767 ~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~sv 846 (964)
++|..|..|.||||+||. .|+.++|++|+++ ||+++.+|..|+||||+|+++||.++
T Consensus 148 ----------------~~~~~d~~g~TpL~~A~~-~g~~~~v~~Ll~~------gad~n~~d~~g~Tpl~~A~~~~~~~i 204 (209)
T d1ot8a_ 148 ----------------NRDAQDDKDETPLFLAAR-EGSYEASKALLDN------FANREITDHMDRLPRDVASERLHHDI 204 (209)
T ss_dssp ----------------CTTCCCTTCCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred ----------------cccccccccccccchhcc-ccHHHHHHHHHHC------CCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 778899999999999999 9999999999999 99999999999999999999999999
Q ss_pred HHHH
Q 002122 847 IHLV 850 (964)
Q Consensus 847 v~LL 850 (964)
|++|
T Consensus 205 v~lL 208 (209)
T d1ot8a_ 205 VRLL 208 (209)
T ss_dssp HHHH
T ss_pred Hhhc
Confidence 9987
|
| >d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: p18ink4C(ink6) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=2.5e-17 Score=154.63 Aligned_cols=153 Identities=19% Similarity=0.202 Sum_probs=123.6
Q ss_pred cccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchh
Q 002122 651 IDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLD 729 (964)
Q Consensus 651 ~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le 729 (964)
.++|.+| -+.+..+-+|++++......+ ....+|||+|+ .++.+++++||+..++.. .
T Consensus 3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d-----------~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~---------~ 61 (156)
T d1ihba_ 3 NELASAAARGDLEQLTSLLQNNVNVNAQN-----------GFGRTALQVMK-LGNPEIARRLLLRGANPD---------L 61 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHTTSCCCTTCCC-----------TTSCCHHHHCC-SSCHHHHHHHHHTTCCTT---------C
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCcCccC-----------Ccccccccccc-cccccccccccccccccc---------c
Confidence 3578888 488888888888774322222 23578999886 688999999998544311 1
Q ss_pred hccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHH
Q 002122 730 LALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLD 809 (964)
Q Consensus 730 ~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~ 809 (964)
.+..+.++|+.++..+..++++.|+++ +. +++..+..|.||||+|+. .++.++++
T Consensus 62 ~~~~~~~~l~~~~~~~~~~~~~~l~~~-------~~-----------------~~~~~~~~~~~~l~~a~~-~~~~~~~~ 116 (156)
T d1ihba_ 62 KDRTGFAVIHDAARAGFLDTLQTLLEF-------QA-----------------DVNIEDNEGNLPLHLAAK-EGHLRVVE 116 (156)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHHHH
T ss_pred ccccCcccccccccccccccccccccc-------cc-----------------cccccccccccccccccc-cccccccc
Confidence 244577999999999999999999888 44 678889999999999999 99999999
Q ss_pred HhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 002122 810 ALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKI 854 (964)
Q Consensus 810 lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ 854 (964)
+|+++. +.+.+.+|..|.||||+|++.||.+++++|+++|
T Consensus 117 ~Ll~~~-----~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~G 156 (156)
T d1ihba_ 117 FLVKHT-----ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156 (156)
T ss_dssp HHHHHS-----CCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred cccccc-----cccccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 999982 3489999999999999999999999999999875
|
| >d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.68 E-value=3.3e-16 Score=154.82 Aligned_cols=159 Identities=18% Similarity=0.100 Sum_probs=126.7
Q ss_pred cccHHHHH-HHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchh
Q 002122 651 IDTKNQAM-DFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLD 729 (964)
Q Consensus 651 ~~~h~~al-~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le 729 (964)
+++|.+|+ +.+..+.+||..... ..+.. .....+|||+|+..|..++|++||+.+++.+.. ..
T Consensus 2 ~pLh~A~~~g~~~~v~~Ll~~~~~--~~~~~--------d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~------~~ 65 (229)
T d1ixva_ 2 YPLHQACMENEFFKVQELLHSKPS--LLLQK--------DQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD------DY 65 (229)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHCGG--GTTCC--------CTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGG------GC
T ss_pred HhHHHHHHcCCHHHHHHHHHcCCC--ccccc--------CCCCCCHHHHHHHcCCccccchhhhhhcccccc------cc
Confidence 57899984 778888888875421 11111 123578999999999999999999966543211 11
Q ss_pred hccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHH
Q 002122 730 LALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLD 809 (964)
Q Consensus 730 ~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~ 809 (964)
.+..|.+++|+|+..+..++++.++.. +. .......+..+.|||+.++. .++.+++.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~---------------~~~~~~~~~~~~~~l~~~~~-~~~~~~~~ 122 (229)
T d1ixva_ 66 PDDSGWTPFHIACSVGNLEVVKSLYDR-------PL---------------KPDLNKITNQGVTCLHLAVG-KKWFEVSQ 122 (229)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHSS-------SS---------------CCCTTCCCTTSCCHHHHHHH-TTCHHHHH
T ss_pred ccccccccccccccccccccccccccc-------cc---------------cccccccccccccccccccc-cchhhhhh
Confidence 244688999999999999999999888 33 11345566789999999999 99999999
Q ss_pred HhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 002122 810 ALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKI 854 (964)
Q Consensus 810 lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ 854 (964)
+|++. +...+.+|..|.||||+|+.+|+.+++++|.+..
T Consensus 123 ~l~~~------~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 161 (229)
T d1ixva_ 123 FLIEN------GASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG 161 (229)
T ss_dssp HHHHT------TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTT
T ss_pred hhhhh------cccccccCCCCCCccchhhhcccccccccccccc
Confidence 99999 8999999999999999999999999999998875
|
| >d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myosin phosphatase targeting subunit 1, MYPT1 species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.68 E-value=2.2e-16 Score=161.65 Aligned_cols=163 Identities=15% Similarity=0.048 Sum_probs=121.9
Q ss_pred ccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCch
Q 002122 650 KIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSL 728 (964)
Q Consensus 650 ~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~l 728 (964)
.++++.+| -+.+..+-+||.++......+ ....+|||+|+.+|+.++|++||+...+...
T Consensus 41 ~t~l~~A~~~G~~~~v~~Ll~~Gadvn~~d-----------~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~-------- 101 (291)
T d1s70b_ 41 GAVFLAACSSGDTEEVLRLLERGADINYAN-----------VDGLTALHQACIDDNVDMVKFLVENGANINQ-------- 101 (291)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHCCCTTCBC-----------TTCCBHHHHHHHTTCHHHHHHHHHTTCCTTC--------
T ss_pred chHHHHHHHcCCHHHHHHHHHCCCCCCccC-----------CCCCcHHHHHHhcCCceeeeeeccccccccc--------
Confidence 35677777 588888888888774322222 1246799999999999999999986543211
Q ss_pred hhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHH
Q 002122 729 DLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVL 808 (964)
Q Consensus 729 e~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV 808 (964)
....+.+|||.|+..++.++++.|+.+ |+ ..+..+..|.||+++|+. .+..+++
T Consensus 102 -~~~~~~~~L~~a~~~~~~~~~~~l~~~-------~~-----------------~~~~~~~~~~~~~~~a~~-~~~~~~~ 155 (291)
T d1s70b_ 102 -PDNEGWIPLHAAASCGYLDIAEYLISQ-------GA-----------------HVGAVNSEGDTPLDIAEE-EAMEELL 155 (291)
T ss_dssp -CCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHCCS-HHHHHHH
T ss_pred -ccccccccccccccccccchhhccccc-------Cc-----------------ccccccccCccccccccc-cccchhc
Confidence 133467999999999999999999988 55 667888999999999998 8888888
Q ss_pred HHhhcCCCCC---------------------ccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 809 DALTDDPGMV---------------------GIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 809 ~lLL~~p~~v---------------------g~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
..|+...... ....+....+..|.||||+|+..|+.++++.|.+++++.
T Consensus 156 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~di 225 (291)
T d1s70b_ 156 QNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDV 225 (291)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCT
T ss_pred cccccccccccccccccccccccccchhhhcccccccccccCCCCChhhHHHHcCChhhhcccccceecc
Confidence 8877531000 001223457889999999999999999999999988754
|
| >d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: bcl-3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=6.5e-17 Score=154.32 Aligned_cols=191 Identities=18% Similarity=0.147 Sum_probs=126.2
Q ss_pred CCcceeecchhhhhHHHHHHHH----hhhcCcchhhhhcCccccHHHHH-HHHHHHhhhhcccccccccCCCCCCCCCcC
Q 002122 614 TFFPFIVAEEDVCSEIRMLESA----LEFNRTDADVERFGKIDTKNQAM-DFIHEIGWLFHRSQSKSRLGHLDPNTDLFP 688 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~----le~~a~~~~~~e~g~~~~h~~al-~fL~EIGWLLqr~~~~~~~~~~d~~l~l~q 688 (964)
+.+|+++|.+. +.+..++.+ .+.++.....+..|.+++|.+|. +....+.+|+.++.......
T Consensus 3 G~TpLh~A~~~--g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~---------- 70 (228)
T d1k1aa_ 3 GDTPLHIAVVQ--GNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALD---------- 70 (228)
T ss_dssp TCCHHHHHHHT--TCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC----------
T ss_pred CccHHHHHHHc--CCHHHHHHHHHHHHHCCCCCCccCCCCCccceehhcccccccccccccccccccccc----------
Confidence 36788888754 333333333 34555544445678888998884 66666667777664322111
Q ss_pred ccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC-----------------------------CCchhhccCCCcHHH
Q 002122 689 LRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE-----------------------------HPSLDLALTELGLLH 739 (964)
Q Consensus 689 l~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~-----------------------------~~~le~~l~G~TpLH 739 (964)
.....++++|...+...+++.+............. .........+.++||
T Consensus 71 -~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~ 149 (228)
T d1k1aa_ 71 -RHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLI 149 (228)
T ss_dssp -TTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHH
T ss_pred -cccccccccccccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHH
Confidence 11234566666666666655554432211100000 000011234678899
Q ss_pred HHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCc
Q 002122 740 RAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVG 819 (964)
Q Consensus 740 ~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg 819 (964)
.|++.+...+++.++.. |. .++.+|..|.||||+|+. .|+.++|++|+++
T Consensus 150 ~a~~~~~~~~~~~~~~~-------~~-----------------~~~~~d~~g~t~L~~A~~-~g~~~~v~~Ll~~----- 199 (228)
T d1k1aa_ 150 HAVENNSLSMVQLLLQH-------GA-----------------NVNAQMYSGSSALHSASG-RGLLPLVRTLVRS----- 199 (228)
T ss_dssp HHHHTTCHHHHHHHHHT-------TC-----------------CTTCBCTTSCBHHHHHHH-HTCHHHHHHHHHT-----
T ss_pred HHHHhhhhhhhhhhhhh-------cc-----------------ccccccccCcchHHHHHH-cCCHHHHHHHHHC-----
Confidence 99988888888888887 55 677888899999999999 8999999999999
Q ss_pred cccccccCCCCCCCHHHHHHHcCCHHHHH
Q 002122 820 IEAWKNARDSSGSTPEDYARLRGHYSYIH 848 (964)
Q Consensus 820 ~gAdinarD~~G~TPLh~A~~rGh~svv~ 848 (964)
||++|++|.+|.||||+|+++||.++++
T Consensus 200 -Gad~n~~d~~G~TpL~~A~~~~~~divk 227 (228)
T d1k1aa_ 200 -GADSSLKNCHNDTPLMVARSRRVIDILR 227 (228)
T ss_dssp -TCCTTCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred -CCCCCCCCCCCCCHHHHHHhCCCccccC
Confidence 9999999999999999999999887764
|
| >d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 53BP2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=3.9e-17 Score=152.85 Aligned_cols=93 Identities=22% Similarity=0.183 Sum_probs=88.4
Q ss_pred CcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcC
Q 002122 735 LGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDD 814 (964)
Q Consensus 735 ~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~ 814 (964)
+++||.||++|+.++|++||+. |+ +||.+|..|+||||+|+. .|+.+++++|+++
T Consensus 2 l~lL~~A~~~G~~~~v~~Ll~~-------g~-----------------d~n~~d~~g~t~Lh~A~~-~~~~~~~~~ll~~ 56 (130)
T d1ycsb1 2 LALLLDSSLEGEFDLVQRIIYE-------VD-----------------DPSLPNDEGITALHNAVC-AGHTEIVKFLVQF 56 (130)
T ss_dssp HHHHHHHHHHTCHHHHHHHTST-------TS-----------------SCCCCCTTSCCHHHHHHH-HTCHHHHHHHHHH
T ss_pred hHHHHHHHHcCCHHHHHHHHHc-------CC-----------------Cccccccccccccccccc-ccccccccccccc
Confidence 3789999999999999999999 87 899999999999999999 9999999999999
Q ss_pred CCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 815 PGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 815 p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
|+++|.+|.+|+||||+|+..||.+++++|.+++++..
T Consensus 57 ------g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~v~ 94 (130)
T d1ycsb1 57 ------GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVF 94 (130)
T ss_dssp ------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred ------ccccccccccCcccccccchhhHHHHHHHHHHcCCCcc
Confidence 99999999999999999999999999999999987653
|
| >d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myotrophin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.67 E-value=3.9e-17 Score=150.41 Aligned_cols=91 Identities=24% Similarity=0.172 Sum_probs=87.2
Q ss_pred cHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCC
Q 002122 736 GLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDP 815 (964)
Q Consensus 736 TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p 815 (964)
|||++|+++|+.++|++||+. |+ ++|.++..|+||||+|+. .|+.+++++|+++
T Consensus 4 tpL~~A~~~g~~~~v~~Ll~~-------g~-----------------d~n~~~~~g~t~lh~A~~-~~~~~~~~~ll~~- 57 (118)
T d1myoa_ 4 KEFMWALKNGDLDEVKDYVAK-------GE-----------------DVNRTLEGGRKPLHYAAD-CGQLEILEFLLLK- 57 (118)
T ss_dssp HHHHHHHHTTCHHHHHHHHTT-------TC-----------------CCCCCSSSSCCTTHHHHH-HSTTTHHHHHHHS-
T ss_pred hHHHHHHHCCCHHHHHHHHHh-------hh-----------------cccccccccccccccccc-ccccccccccccc-
Confidence 899999999999999999998 77 899999999999999999 9999999999999
Q ss_pred CCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 816 GMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 816 ~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
|+++|.+|..|.||||+|+.+|+.+++++|.+++++.
T Consensus 58 -----g~din~~d~~g~tpLh~A~~~~~~~~v~~Ll~~Gad~ 94 (118)
T d1myoa_ 58 -----GADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADK 94 (118)
T ss_dssp -----SCTTTCCSSSCSCHHHHHHTTTCCHHHHHHHTTCCCS
T ss_pred -----cceeeecccccccchhhhhhcCchhhhhhhhcccccc
Confidence 9999999999999999999999999999999988654
|
| >d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: bcl-3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=1.2e-15 Score=145.41 Aligned_cols=154 Identities=18% Similarity=0.107 Sum_probs=113.6
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCcc---ccccCcc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEV---SDRLGSE 768 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~---~dGa~~~ 768 (964)
..||||+||..|+.++|+.|++.+.+.+++.+. .+..|+||||+|+..|+.++|++||++..... .+|....
T Consensus 3 G~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~-----~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~ 77 (228)
T d1k1aa_ 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDI-----YNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAA 77 (228)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCC-----CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCc-----cCCCCCccceehhccccccccccccccccccccccccccccc
Confidence 468999999999999999999876654444322 35569999999999999999999998742211 1111000
Q ss_pred cccccc------------c-------ccccc-------------------------ccCCCcCCCCCChHHHHHHhhCCC
Q 002122 769 NKALVD------------G-------VHKGF-------------------------LFRPDVIGPAGLTPIHIAAGKDGS 804 (964)
Q Consensus 769 ~~~lv~------------~-------a~~~y-------------------------~fdpn~~d~~G~TPLHiAA~~~G~ 804 (964)
..+... . ..... ..........|.||||.|+. .+.
T Consensus 78 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~-~~~ 156 (228)
T d1k1aa_ 78 HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVE-NNS 156 (228)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHH-TTC
T ss_pred ccccccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHH-hhh
Confidence 000000 0 00000 01123355679999999999 999
Q ss_pred HHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 805 EDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 805 ~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
..+++.++++ +.+.+.+|..|.||||+|+.+|+.+++++|.+++++.
T Consensus 157 ~~~~~~~~~~------~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~ 203 (228)
T d1k1aa_ 157 LSMVQLLLQH------GANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADS 203 (228)
T ss_dssp HHHHHHHHHT------TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred hhhhhhhhhh------ccccccccccCcchHHHHHHcCCHHHHHHHHHCCCCC
Confidence 9999999999 8999999999999999999999999999999998764
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=3.3e-15 Score=158.74 Aligned_cols=204 Identities=19% Similarity=0.198 Sum_probs=144.0
Q ss_pred hhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCC----------------------
Q 002122 625 VCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLD---------------------- 681 (964)
Q Consensus 625 iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d---------------------- 681 (964)
.+...+.++.+++.+......+..+.+++|.++ -+.+..+.+|++++......+...
T Consensus 141 ~~~~~~~v~~ll~~~~~~~~~~~~~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~ 220 (408)
T d1n11a_ 141 KYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQY 220 (408)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHcCCCCCcCCCcCchHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcchhhhccchhhhhhhhhhc
Confidence 345566666666666555444445566666665 244455555555543211110000
Q ss_pred CCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCcc
Q 002122 682 PNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEV 761 (964)
Q Consensus 682 ~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~ 761 (964)
............++|++|++.++.++++.++....... ..+..|.||||.|++.++.+++++|++.
T Consensus 221 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~---------~~~~~g~~~l~~a~~~~~~~i~~~Ll~~----- 286 (408)
T d1n11a_ 221 GGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGN---------LGNKSGLTPLHLVAQEGHVPVADVLIKH----- 286 (408)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT---------CCCTTCCCHHHHHHHHTCHHHHHHHHHH-----
T ss_pred cccccccCCCCCCHHHHHHHhCcHhHhhhhhccccccc---------cccCCCCChhhhhhhcCcHHHHHHHHHC-----
Confidence 00001112224578889999999998888877433211 1244578999999999999999999998
Q ss_pred ccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHc
Q 002122 762 SDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLR 841 (964)
Q Consensus 762 ~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~r 841 (964)
|+ +++..+..+.||||+|+. .++.++++.|++. |+++|.+|.+|.||||+|+++
T Consensus 287 --g~-----------------~~~~~~~~~~t~L~~~~~-~~~~~~~~~ll~~------g~~in~~d~~G~T~Lh~A~~~ 340 (408)
T d1n11a_ 287 --GV-----------------MVDATTRMGYTPLHVASH-YGNIKLVKFLLQH------QADVNAKTKLGYSPLHQAAQQ 340 (408)
T ss_dssp --TC-----------------CTTCCCSSCCCHHHHHHH-SSCSHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHT
T ss_pred --CC-----------------ccccccccccccchhhcc-cCcceeeeeeccc------cccccccCCCCCCHHHHHHHc
Confidence 77 788889999999999999 9999999999999 999999999999999999999
Q ss_pred CCHHHHHHHHHhhhcCCC---CCCceeecC
Q 002122 842 GHYSYIHLVQKKINKRPN---GGHVVVDIC 868 (964)
Q Consensus 842 Gh~svv~LL~~k~ak~~~---~~~v~v~ip 868 (964)
|+.+++++|.+++++... .+.+.++++
T Consensus 341 g~~~iv~~Ll~~GAd~n~~d~~G~t~L~~A 370 (408)
T d1n11a_ 341 GHTDIVTLLLKNGASPNEVSSDGTTPLAIA 370 (408)
T ss_dssp TCHHHHHHHHHTTCCSCCCCSSSCCHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 999999999999986432 334444443
|
| >d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p19ink4D species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=1.1e-15 Score=145.00 Aligned_cols=121 Identities=24% Similarity=0.225 Sum_probs=104.9
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
...|+.|+.+|+.++|+.||+.. ..+. ...+..|.||||+|+. ++.++|+.||+. +.
T Consensus 3 g~~L~~Aa~~g~~~~vk~lL~~~---~~~~-----n~~d~~g~t~L~~A~~-~~~~~v~~Ll~~-------~~------- 59 (156)
T d1bd8a_ 3 GDRLSGAAARGDVQEVRRLLHRE---LVHP-----DALNRFGKTALQVMMF-GSTAIALELLKQ-------GA------- 59 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTT---CCCT-----TCCCTTSCCHHHHSCT-TCHHHHHHHHHT-------TC-------
T ss_pred cHHHHHHHHcCCHHHHHHHHHhC---CCCC-----CccCCCCCcccccccc-cccccccccccc-------cc-------
Confidence 35799999999999999999842 1111 1235668999999975 889999999998 55
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
++|..+..|.+|||+|+. .++.+++++++++ ++++|.+|.+|.||||+|+..|+.+++++|.+
T Consensus 60 ----------~~~~~~~~~~~~l~~~~~-~~~~~~~~~~l~~------~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~~ 122 (156)
T d1bd8a_ 60 ----------SPNVQDTSGTSPVHDAAR-TGFLDTLKVLVEH------GADVNVPDGTGALPIHLAVQEGHTAVVSFLAA 122 (156)
T ss_dssp ----------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred ----------cccccccccccccccccc-ccccccccccccc------ccccccccCCCCeeeccccccccccccccccc
Confidence 788889999999999999 9999999999999 99999999999999999999999999999985
Q ss_pred h
Q 002122 853 K 853 (964)
Q Consensus 853 k 853 (964)
.
T Consensus 123 ~ 123 (156)
T d1bd8a_ 123 E 123 (156)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: I-kappa-B-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=2e-15 Score=150.27 Aligned_cols=146 Identities=16% Similarity=0.043 Sum_probs=115.4
Q ss_pred cccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccc
Q 002122 690 RRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSEN 769 (964)
Q Consensus 690 ~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~ 769 (964)
...++|||+|+..++.+++++|++.+++... .+..|.||||.|+..++.++++.|+... ..
T Consensus 37 ~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~---------~d~~g~t~l~~~~~~~~~~~~~~l~~~~-------~~--- 97 (221)
T d1iknd_ 37 NLQQTPLHLAVITNQPEIAEALLGAGCDPEL---------RDFRGNTPLHLACEQGCLASVGVLTQSC-------TT--- 97 (221)
T ss_dssp TTCCCHHHHHHHTTCHHHHHCCCSCCCCSCC---------CCTTCCCHHHHHHHHTCHHHHHHHHHST-------TT---
T ss_pred CCCCccccccccccccccccccccccccccc---------cccccccccccccccccccccchhhhhc-------cc---
Confidence 3468999999999999999999986543221 3566889999999999999999999872 20
Q ss_pred cccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCC-CCCCCHHHHHHHcCCHHHHH
Q 002122 770 KALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARD-SSGSTPEDYARLRGHYSYIH 848 (964)
Q Consensus 770 ~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD-~~G~TPLh~A~~rGh~svv~ 848 (964)
.......+.....|.||||.|+. .++.+++.+|+.. +++++..+ .+|.||||+|+.+|+.++++
T Consensus 98 --------~~~~~~~~~~~~~~~t~l~~a~~-~~~~~~~~~l~~~------~~~~~~~~~~~G~T~L~~A~~~g~~~~v~ 162 (221)
T d1iknd_ 98 --------PHLHSILKATNYNGHTCLHLASI-HGYLGIVELLVSL------GADVNAQEPCNGRTALHLAVDLQNPDLVS 162 (221)
T ss_dssp --------TSSSCGGGCCCTTCCCHHHHHHH-TTCHHHHHHHHHH------TCCTTCCCTTTCCCHHHHHHHTTCHHHHH
T ss_pred --------ccccccccccccccchhhhHHhh-cCChhheeeeccc------CcccccccccCCCCccccccccccHHHHH
Confidence 01111334455679999999999 9999999999998 88888876 57999999999999999999
Q ss_pred HHHHhhhcCC---CCCCceeecCC
Q 002122 849 LVQKKINKRP---NGGHVVVDICG 869 (964)
Q Consensus 849 LL~~k~ak~~---~~~~v~v~ip~ 869 (964)
+|.+++++.. ..+...++++.
T Consensus 163 ~Ll~~gad~~~~~~~G~tpl~~A~ 186 (221)
T d1iknd_ 163 LLLKCGADVNRVTYQGYSPYQLTW 186 (221)
T ss_dssp HHHTTTCCSCCCCTTCCCGGGGCT
T ss_pred HHHhcCCcccccCCCCCCHHHHHH
Confidence 9999887643 24455556543
|
| >d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Lin-12 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.59 E-value=1.7e-15 Score=152.89 Aligned_cols=159 Identities=16% Similarity=0.137 Sum_probs=111.2
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCcc---ccccCc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEV---SDRLGS 767 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~---~dGa~~ 767 (964)
..++|||+|+..|+.++|+.||......-...|.... ..+..|.||||+|++.|+.++|++||++..+.. .+|..+
T Consensus 32 ~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn-~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~ 110 (277)
T d2fo1e1 32 HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVN-AMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSA 110 (277)
T ss_dssp SCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCH
T ss_pred CCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCcc-ccCCCCCeeecccccccccccccccccccccccccccccccc
Confidence 4679999999999999999998653221111122111 135679999999999999999999999732211 111100
Q ss_pred ccc--------------------ccccc---------------------------------cccccccCCCcCCCCCChH
Q 002122 768 ENK--------------------ALVDG---------------------------------VHKGFLFRPDVIGPAGLTP 794 (964)
Q Consensus 768 ~~~--------------------~lv~~---------------------------------a~~~y~fdpn~~d~~G~TP 794 (964)
... ..+.. ....+....+..+..|.||
T Consensus 111 l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~ 190 (277)
T d2fo1e1 111 LHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTA 190 (277)
T ss_dssp HHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCT
T ss_pred ccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhcccccccccccccccccccccccccccccccccCCCCc
Confidence 000 00000 0000012245567789999
Q ss_pred HHHHHhhCCCHHHHHHhh-cCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 795 IHIAAGKDGSEDVLDALT-DDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 795 LHiAA~~~G~~dVV~lLL-~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
||+|+. .++.+++++++ .. +.+.+.+|..|.||||+|+..|+.+++++|.+++++.
T Consensus 191 L~~~~~-~~~~~~~~~~l~~~------~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadi 247 (277)
T d2fo1e1 191 LHYAAQ-VSNMPIVKYLVGEK------GSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASV 247 (277)
T ss_dssp HHHHHS-SCCHHHHHHHHHHS------CCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred cccccc-cccccccccccccc------cccccccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCC
Confidence 999999 99999998755 45 7889999999999999999999999999999988764
|
| >d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: GA bindinig protein (GABP) beta 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.59 E-value=8.9e-15 Score=136.50 Aligned_cols=124 Identities=21% Similarity=0.134 Sum_probs=108.2
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++|+.|+..|+.++|+.||+.+++.. .+..|.||||+|+..++.++++.++... .
T Consensus 3 ~t~L~~Aa~~g~~~~v~~LL~~ga~~~----------~~~~g~t~L~~a~~~~~~~~~~~~~~~~-------~------- 58 (153)
T d1awcb_ 3 GKKLLEAARAGQDDEVRILMANGAPFT----------TDWLGTSPLHLAAQYGHFSTTEVLLRAG-------V------- 58 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC----------CCTTCCCHHHHHHHHTCHHHHHHHHTTT-------C-------
T ss_pred CHHHHHHHHCCCHHHHHHHHHcCCCcc----------cccCCCcccccccccccccccccccccc-------c-------
Confidence 579999999999999999999754311 2556899999999999999999999882 2
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
..+..+..+.|++|.++. ..+.+++++|..+ +++.+.+|.+|.||||+|+..|+.+++++|.+
T Consensus 59 ----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~------~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~ 121 (153)
T d1awcb_ 59 ----------SRDARTKVDRTPLHMAAS-EGHANIVEVLLKH------GADVNAKDMLKMTALHWATEHNHQEVVELLIK 121 (153)
T ss_dssp ----------CTTCCCTTCCCHHHHHHH-HTCHHHHHHHHTT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ----------cccccccccccccccccc-cccceeeeccccc------CCccccccccCchHHHhhhhcchhheeeeccc
Confidence 334556678899999999 9999999999999 99999999999999999999999999999999
Q ss_pred hhhcC
Q 002122 853 KINKR 857 (964)
Q Consensus 853 k~ak~ 857 (964)
++++.
T Consensus 122 ~gad~ 126 (153)
T d1awcb_ 122 YGADV 126 (153)
T ss_dssp TTCCT
T ss_pred cccCC
Confidence 98754
|
| >d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: p18ink4C(ink6) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=3.4e-15 Score=139.79 Aligned_cols=121 Identities=21% Similarity=0.157 Sum_probs=108.7
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccc
Q 002122 694 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 773 (964)
Q Consensus 694 ~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv 773 (964)
++||+|+.+|+.++|+.||+.+++.+ ..+..|+||||+|+ .++.+++++||+. |+
T Consensus 3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n---------~~d~~g~TpL~~A~-~~~~ei~~~Ll~~-------~a-------- 57 (156)
T d1ihba_ 3 NELASAAARGDLEQLTSLLQNNVNVN---------AQNGFGRTALQVMK-LGNPEIARRLLLR-------GA-------- 57 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHTTSCCCTT---------CCCTTSCCHHHHCC-SSCHHHHHHHHHT-------TC--------
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCcC---------ccCCcccccccccc-ccccccccccccc-------cc--------
Confidence 68999999999999999999654321 13566999999886 7899999999999 77
Q ss_pred cccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 002122 774 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKK 853 (964)
Q Consensus 774 ~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k 853 (964)
+++..+..|.||||.|+. .+..+++..|++. +.+++..|..|.||+|+|+..++.+++++|.++
T Consensus 58 ---------~~~~~~~~~~~~l~~~~~-~~~~~~~~~l~~~------~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~ 121 (156)
T d1ihba_ 58 ---------NPDLKDRTGFAVIHDAAR-AGFLDTLQTLLEF------QADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKH 121 (156)
T ss_dssp ---------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred ---------ccccccccCccccccccc-ccccccccccccc------ccccccccccccccccccccccccccccccccc
Confidence 789999999999999999 9999999999999 899999999999999999999999999999887
Q ss_pred hh
Q 002122 854 IN 855 (964)
Q Consensus 854 ~a 855 (964)
++
T Consensus 122 ~~ 123 (156)
T d1ihba_ 122 TA 123 (156)
T ss_dssp SC
T ss_pred cc
Confidence 65
|
| >d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Pseudo ankyrin repeat-like family: Pseudo ankyrin repeat domain: Hypothetical protein LPG2416 species: Legionella pneumophila [TaxId: 446]
Probab=99.54 E-value=1.7e-16 Score=171.10 Aligned_cols=128 Identities=13% Similarity=0.036 Sum_probs=101.1
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++|++|+++|+.++++++.. +...+++.+. .+..|+||||+||+.|+.++|++|++. |+
T Consensus 90 ~~t~L~~Aa~~g~~~~~~~~~~-L~~~~~~in~-----~~~~g~taL~~Aa~~G~~~~v~~Ll~~-------g~------ 150 (346)
T d2ajaa1 90 SEVICFVAAITGCSSALDTLCL-LLTSDEIVKV-----IQAENYQAFRLAAENGHLHVLNRLCEL-------AP------ 150 (346)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTT-C--CCSSCC-------CHHHHHHHHHHHHTTCHHHHHHHHHS-------CT------
T ss_pred CCcHHHHHHHhCCHHHHHHHHH-HHhCCCcccc-----cCCCCCCHHHHHHHCCCHHHHHHHHHc-------CC------
Confidence 4789999999999988876422 1112222221 244588999999999999999999999 66
Q ss_pred cccccccccccCCCcCC--CCCChHHHHHHhhCCCHHHHHHhhcCCCCCcccccc---ccCCCCCCCHHHHHHHcCCHHH
Q 002122 772 LVDGVHKGFLFRPDVIG--PAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWK---NARDSSGSTPEDYARLRGHYSY 846 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d--~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdi---narD~~G~TPLh~A~~rGh~sv 846 (964)
+++..+ .+|.||||+||. .|+.+||++|++. +++. +..+.+|.||+++|+.+||.++
T Consensus 151 -----------~~~~~~~~~~g~t~L~~Aa~-~g~~~iv~~Ll~~------~~~~~~~~~~~~~~~t~l~~A~~~g~~~i 212 (346)
T d2ajaa1 151 -----------TEIMAMIQAENYHAFRLAAE-NGHLHVLNRLCEL------APTEATAMIQAENYYAFRWAAVGRGHHNV 212 (346)
T ss_dssp -----------TTHHHHHSHHHHHHHHHHHH-TTCHHHHHHHHHS------CGGGHHHHHHHHHHHHHHHHHSTTCCHHH
T ss_pred -----------CccccccccCCCChhHHHHH-HhhHHHHHHHHHc------CCcccccccccCCCcchhhHHhhcCHHHH
Confidence 666654 469999999999 9999999999998 7654 4456778899999999999999
Q ss_pred HHHHHHhhhc
Q 002122 847 IHLVQKKINK 856 (964)
Q Consensus 847 v~LL~~k~ak 856 (964)
+++|.+++++
T Consensus 213 v~~Ll~~ga~ 222 (346)
T d2ajaa1 213 INFLLDCPVM 222 (346)
T ss_dssp HHHHTTSHHH
T ss_pred HHHHHhCCCC
Confidence 9999987754
|
| >d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Swi6 ankyrin-repeat fragment species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.51 E-value=2e-14 Score=150.97 Aligned_cols=161 Identities=14% Similarity=0.073 Sum_probs=107.3
Q ss_pred hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCch---HHHHHHhhhhccCccc
Q 002122 646 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWC---AVVKKLLHILLDGTVS 721 (964)
Q Consensus 646 ~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~---aVVk~LL~~l~d~~vd 721 (964)
++.|.+++|.+| .+.+..+..|++++......+ ...++|||+||..+++ ..+..|++.+.+. +
T Consensus 104 D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d-----------~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~~-~- 170 (301)
T d1sw6a_ 104 DEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGD-----------NMGESCLVKAVKSVNNYDSGTFEALLDYLYPC-L- 170 (301)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCC-----------TTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGG-G-
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcCC-----------cccccHHHHhhhcccchhhhhHHHHHHHHhhh-h-
Confidence 467899999999 688888899998885433332 2357899999987753 2233344433221 1
Q ss_pred CCCCCchhhccCCCcHHHHHHHcCCH------------HHHHHHhccCCCccccccCccccccccc---------cc---
Q 002122 722 LGEHPSLDLALTELGLLHRAVRKNSR------------PLVDLLLRFVPLEVSDRLGSENKALVDG---------VH--- 777 (964)
Q Consensus 722 ~g~~~~le~~l~G~TpLH~AVr~g~~------------e~VelLL~~~p~~~~dGa~~~~~~lv~~---------a~--- 777 (964)
...+..|.||||.|+..+.. .++.+|+... ........... ..
T Consensus 171 ------~~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (301)
T d1sw6a_ 171 ------ILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQ-------NRPIQSGTNEKESKPNDKNGERKDS 237 (301)
T ss_dssp ------GEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGG-------GCCEEEC----------------CH
T ss_pred ------hhcccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcC-------CcchhcccccccchhHHHHhcchHH
Confidence 11245688999998876542 2344454441 11000000000 00
Q ss_pred --------cccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHH
Q 002122 778 --------KGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYAR 839 (964)
Q Consensus 778 --------~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~ 839 (964)
..+.-.+|.+|..|+||||+||. .|+.++|++|+++ ||+++.+|..|.||||||+
T Consensus 238 ~~~~~~~~~~~~~~in~~D~~G~TpLh~A~~-~g~~~iv~~Ll~~------GAd~~~~n~~G~Tpl~~A~ 300 (301)
T d1sw6a_ 238 ILENLDLKWIIANMLNAQDSNGDTCLNIAAR-LGNISIVDALLDY------GADPFIANKSGLRPVDFGA 300 (301)
T ss_dssp HHHHCSHHHHHHHTTTCCCTTSCCHHHHHHH-HCCHHHHHHHHHT------TCCTTCCCTTSCCGGGGTC
T ss_pred HHHHHhhHHHHhcCccCCCCCCCCHHHHHHH-cCCHHHHHHHHHC------CCCCCCCCCCCCCHHHHcC
Confidence 00011278999999999999999 9999999999999 9999999999999999995
|
| >d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Swi6 ankyrin-repeat fragment species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.50 E-value=3.4e-14 Score=149.07 Aligned_cols=132 Identities=17% Similarity=0.051 Sum_probs=93.1
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCH-------HHHHHHhccCCCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSR-------PLVDLLLRFVPLEVSD 763 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~-------e~VelLL~~~p~~~~d 763 (964)
..++|||+|+..|+.++|++||+.+++... .+..|.||||+||..++. +++++|..
T Consensus 106 ~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~---------~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~-------- 168 (301)
T d1sw6a_ 106 HGNTPLHWLTSIANLELVKHLVKHGSNRLY---------GDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP-------- 168 (301)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTB---------CCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG--------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCc---------CCcccccHHHHhhhcccchhhhhHHHHHHHHhh--------
Confidence 367899999999999999999996553221 355699999999986642 34444332
Q ss_pred ccCccccccccccccccccCCCcCCCCCChHHHHHHhhC---CCHH--------HHHHhhcCCCCC--------------
Q 002122 764 RLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKD---GSED--------VLDALTDDPGMV-------------- 818 (964)
Q Consensus 764 Ga~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~---G~~d--------VV~lLL~~p~~v-------------- 818 (964)
..+..|..|+||||.|+... +... ++..|.......
T Consensus 169 -------------------~~~~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 229 (301)
T d1sw6a_ 169 -------------------CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPND 229 (301)
T ss_dssp -------------------GGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------
T ss_pred -------------------hhhhcccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHH
Confidence 23556788999999888622 2222 233333321100
Q ss_pred -----------------ccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 819 -----------------GIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 819 -----------------g~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
.++..+|++|.+|+||||+|+++||.+++++|.+++++..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~ 286 (301)
T d1sw6a_ 230 KNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPF 286 (301)
T ss_dssp ------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTT
T ss_pred HHhcchHHHHHHHhhHHHHhcCccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 0112278999999999999999999999999999998643
|
| >d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p16ink4A species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=2.1e-14 Score=132.97 Aligned_cols=91 Identities=21% Similarity=0.193 Sum_probs=84.1
Q ss_pred CcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcC
Q 002122 735 LGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDD 814 (964)
Q Consensus 735 ~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~ 814 (964)
.++||.||++|+.++|++||++ |+ +||.++..|.||||+| . .|+.++|++|+++
T Consensus 4 ~~~L~~Aa~~G~~~~v~~Ll~~-------ga-----------------d~n~~~~~g~t~l~~a-~-~g~~~~v~~Ll~~ 57 (125)
T d1bi7b_ 4 ADWLATAAARGRVEEVRALLEA-------GA-----------------NPNAPNSYGRRPIQVM-M-MGSARVAELLLLH 57 (125)
T ss_dssp TTHHHHHHHHTCHHHHHHHHTT-------TC-----------------CTTCCCSSSCCTTTSS-C-TTCHHHHHHHHTT
T ss_pred hhHHHHHHHCCCHHHHHHHHHc-------CC-----------------cccccccccccccccc-c-ccccccccccccc
Confidence 4899999999999999999999 87 8999999999999966 4 6999999999999
Q ss_pred CCCCccccccccCCCCCC-CHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 815 PGMVGIEAWKNARDSSGS-TPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 815 p~~vg~gAdinarD~~G~-TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
|+++|.+|..|. ||||+|+.+|+.+++++|.+++++.
T Consensus 58 ------ga~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~ga~~ 95 (125)
T d1bi7b_ 58 ------GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARL 95 (125)
T ss_dssp ------TCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCS
T ss_pred ------cccccccccccccccccccccccccccccccccccccc
Confidence 999999998876 6999999999999999999998654
|
| >d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Neurogenic locus notch receptor domain species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.47 E-value=2.6e-13 Score=131.85 Aligned_cols=150 Identities=19% Similarity=0.183 Sum_probs=108.8
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..+|||+||..|+.++|+.||+..++.+. .+..+.++++.++..++.......+.................
T Consensus 23 G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (209)
T d1ot8a_ 23 GETSLHLAARFARADAAKRLLDAGADANS---------QDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTP 93 (209)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTC---------CCTTSCCHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTCCCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhhcccccc---------cccccccccccccccccccccccccccccccccccccccccc
Confidence 47899999999999999999996543221 234466888888888888776666554211100000000000
Q ss_pred ccccc----------ccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHc
Q 002122 772 LVDGV----------HKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLR 841 (964)
Q Consensus 772 lv~~a----------~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~r 841 (964)
..... -..+..+++.++..|.||||.|+. .|..++++.|++. +++++.+|..|.||||+|+..
T Consensus 94 ~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~-~~~~~~~~~l~~~------~~~~~~~d~~g~TpL~~A~~~ 166 (209)
T d1ot8a_ 94 LILAARLAIEGMVEDLITADADINAADNSGKTALHWAAA-VNNTEAVNILLMH------HANRDAQDDKDETPLFLAARE 166 (209)
T ss_dssp HHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHT
T ss_pred ccccccccchhhhhhhhhhcccccccCCCCCCcchhhcc-cCcceeeeeeccc------cccccccccccccccchhccc
Confidence 00000 001123567889999999999999 9999999999999 899999999999999999999
Q ss_pred CCHHHHHHHHHhhhcC
Q 002122 842 GHYSYIHLVQKKINKR 857 (964)
Q Consensus 842 Gh~svv~LL~~k~ak~ 857 (964)
||.+++++|.+++++.
T Consensus 167 g~~~~v~~Ll~~gad~ 182 (209)
T d1ot8a_ 167 GSYEASKALLDNFANR 182 (209)
T ss_dssp TCHHHHHHHHHTTCCT
T ss_pred cHHHHHHHHHHCCCCC
Confidence 9999999999988764
|
| >d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Pseudo ankyrin repeat-like family: Pseudo ankyrin repeat domain: Hypothetical protein LPG2416 species: Legionella pneumophila [TaxId: 446]
Probab=99.38 E-value=3e-14 Score=153.46 Aligned_cols=94 Identities=16% Similarity=0.104 Sum_probs=81.1
Q ss_pred ccCCCcHHHHHHHcCCHHHHHH---HhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHH
Q 002122 731 ALTELGLLHRAVRKNSRPLVDL---LLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDV 807 (964)
Q Consensus 731 ~l~G~TpLH~AVr~g~~e~Vel---LL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dV 807 (964)
+..|.||||+|+++|+.+++++ |+.+ |+ ++|.+|..|.||||+||. .|+.+|
T Consensus 87 ~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~-------~~-----------------~in~~~~~g~taL~~Aa~-~G~~~~ 141 (346)
T d2ajaa1 87 GIKSEVICFVAAITGCSSALDTLCLLLTS-------DE-----------------IVKVIQAENYQAFRLAAE-NGHLHV 141 (346)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--C-------CS-----------------SCC--CHHHHHHHHHHHH-TTCHHH
T ss_pred cCCCCcHHHHHHHhCCHHHHHHHHHHHhC-------CC-----------------cccccCCCCCCHHHHHHH-CCCHHH
Confidence 4467899999999999988776 5666 76 889999999999999999 999999
Q ss_pred HHHhhcCCCCCccccccccCC--CCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 002122 808 LDALTDDPGMVGIEAWKNARD--SSGSTPEDYARLRGHYSYIHLVQKKIN 855 (964)
Q Consensus 808 V~lLL~~p~~vg~gAdinarD--~~G~TPLh~A~~rGh~svv~LL~~k~a 855 (964)
|++|+++ |++++..| .+|.||||+|+.+||.+++++|.++++
T Consensus 142 v~~Ll~~------g~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~ 185 (346)
T d2ajaa1 142 LNRLCEL------APTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAP 185 (346)
T ss_dssp HHHHHHS------CTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCG
T ss_pred HHHHHHc------CCCccccccccCCCChhHHHHHHhhHHHHHHHHHcCC
Confidence 9999999 99999876 469999999999999999999998654
|
| >d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Pyk2-associated protein beta species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.37 E-value=5.7e-13 Score=128.83 Aligned_cols=89 Identities=18% Similarity=0.137 Sum_probs=78.1
Q ss_pred cchHHHHHHH---cCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcc
Q 002122 692 FKWLIEFSMD---HEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSE 768 (964)
Q Consensus 692 ~k~lL~fAve---~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~ 768 (964)
.+++||+|+. .++.++|++||+.+++.+ ..+..|+||||+||+.|+.++|++||++ |+
T Consensus 45 g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin---------~~d~~g~TpLh~A~~~~~~~~v~~Ll~~-------ga--- 105 (154)
T d1dcqa1 45 DETALHLAVRSVDRTSLHIVDFLVQNSGNLD---------KQTGKGSTALHYCCLTDNAECLKLLLRG-------KA--- 105 (154)
T ss_dssp TCBHHHHHHHHCCTTTHHHHHHHHHHCSCTT---------CCCTTCCCHHHHHHHTTCHHHHHHHHHT-------TC---
T ss_pred CCchHHHHHHhcCCCCHHHHHHHHHcCCChh---------hhhhhhcccccccccccccccccccccc-------Cc---
Confidence 5789999996 478899999999754321 1355699999999999999999999999 88
Q ss_pred ccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcC
Q 002122 769 NKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDD 814 (964)
Q Consensus 769 ~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~ 814 (964)
++|.+|..|.||||+|+. .|+.+|+++|++.
T Consensus 106 --------------d~~~~d~~g~tpL~~A~~-~~~~~i~~~L~~~ 136 (154)
T d1dcqa1 106 --------------SIEIANESGETPLDIAKR-LKHEHCEELLTQA 136 (154)
T ss_dssp --------------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHH
T ss_pred --------------cccccCCCCCCHHHHHHH-cCCHHHHHHHHHh
Confidence 889999999999999999 9999999999986
|
| >d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: RNase L, 2-5a-dependent ribonuclease species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=1.4e-12 Score=131.83 Aligned_cols=133 Identities=18% Similarity=0.076 Sum_probs=97.4
Q ss_pred cCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHH----HHHcCchHHHHHHhhhhccCcccC
Q 002122 648 FGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEF----SMDHEWCAVVKKLLHILLDGTVSL 722 (964)
Q Consensus 648 ~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~f----Ave~g~~aVVk~LL~~l~d~~vd~ 722 (964)
.|.+++|.++ .+.+.-+.+|+.+... .....+ ...++++.. +...+...+++.|++.+++.+
T Consensus 147 ~g~t~L~~A~~~~~~~~~~~Ll~~~~~--~i~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n--- 213 (285)
T d1wdya_ 147 GGATALMDAAEKGHVEVLKILLDEMGA--DVNACD--------NMGRNALIHALLSSDDSDVEAITHLLLDHGADVN--- 213 (285)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHTSCC--CTTCCC--------TTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSS---
T ss_pred cCchHHHHHHHcCCHHHHHHHHhccCC--Cccccc--------CCCCcccccccccccchHHHHHHHHHHHCCCCCC---
Confidence 4677888887 4777778888765321 011110 011223322 344456678899988654321
Q ss_pred CCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhC
Q 002122 723 GEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKD 802 (964)
Q Consensus 723 g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~ 802 (964)
..+..|.||||+|++.|+.++|++||... |+ ++|.+|.+|+||||+|+. .
T Consensus 214 ------~~~~~g~t~L~~a~~~~~~~~v~~lL~~~------g~-----------------din~~d~~G~TpL~~A~~-~ 263 (285)
T d1wdya_ 214 ------VRGERGKTPLILAVEKKHLGLVQRLLEQE------HI-----------------EINDTDSDGKTALLLAVE-L 263 (285)
T ss_dssp ------CCCTTSCCHHHHHHHTTCHHHHHHHHHSS------SC-----------------CTTCCCTTSCCHHHHHHH-T
T ss_pred ------ccCCCCCCccchhhhcCcHHHHHHHHHcC------CC-----------------CCcCCCCCCCCHHHHHHH-c
Confidence 13456889999999999999999999752 55 899999999999999999 9
Q ss_pred CCHHHHHHhhcCCCCCccccccccCCC
Q 002122 803 GSEDVLDALTDDPGMVGIEAWKNARDS 829 (964)
Q Consensus 803 G~~dVV~lLL~~p~~vg~gAdinarD~ 829 (964)
|+.++|++|+++ ||++|++|.
T Consensus 264 ~~~eiv~~Ll~~------GAd~n~~d~ 284 (285)
T d1wdya_ 264 KLKKIAELLCKR------GASTDCGDL 284 (285)
T ss_dssp TCHHHHHHHHHH------SSCSCCSSC
T ss_pred CCHHHHHHHHHC------CCCCCcccC
Confidence 999999999999 999999984
|