Citrus Sinensis ID: 002124

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960----

MLEQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITDSTSPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSSGCPEVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKLESNVQKENIFDGELLSREASEENSGSSLPVQFNWQIPLADNSSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHSQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSSGIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESNMVPNGLEDIADGDLDLIDIDSLLDDDTFMSVAFE

cccccccEEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccHHHHHHcccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEEEcccccccccccEEEEEEccccccccccccccEEEEccccccHHHHHccccccccccccccccccEEEEEcccEECccEEEEEECccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHcccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccccccHHHHHHHcccHHHHHHHHHccccHHHHccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccc

MLEQDLMHIVFVHYLEVQ*****************************************************************************************************************************************ALGLASWE*VLEH****************************************************************DLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCA*********************************************************L*KVDSFSRWM******VDNLH****************************DQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSM*************************KE*EESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGL****************************DGRK**EERLQKALGRVKSM**Y***RAQYRRLLTVV**********************DLDLIDIDSLLDDDTFMSVAF*

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Calmodulin-binding transcription activator 2	Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'.	probable	Q6NPP4

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1N11, chain A
Confidence level:very confident
Coverage over the Query: 409-737
View the alignment between query and template
View the model in PyMOL

Template: 1SW6, chain A
Confidence level:very confident
Coverage over the Query: 389-403,414-433,450-517,556-603,616-699
View the alignment between query and template
View the model in PyMOL

Template: 2DFS, chain A
Confidence level:very confident
Coverage over the Query: 785-927
View the alignment between query and template
View the model in PyMOL

Template: 2DFS, chain A
Confidence level:very confident
Coverage over the Query: 737-754,785-916
View the alignment between query and template
View the model in PyMOL

Template: 1UAD, chain C
Confidence level:probable
Coverage over the Query: 377-466
View the alignment between query and template
View the model in PyMOL