Citrus Sinensis ID: 002151
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 959 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LV11 | 956 | ATPase 11, plasma membran | yes | no | 0.986 | 0.989 | 0.789 | 0.0 | |
| Q08435 | 957 | Plasma membrane ATPase 1 | N/A | no | 0.986 | 0.988 | 0.793 | 0.0 | |
| P22180 | 956 | Plasma membrane ATPase 1 | N/A | no | 0.986 | 0.989 | 0.795 | 0.0 | |
| Q9SU58 | 960 | ATPase 4, plasma membrane | no | no | 0.986 | 0.985 | 0.788 | 0.0 | |
| Q08436 | 956 | Plasma membrane ATPase 3 | N/A | no | 0.986 | 0.989 | 0.793 | 0.0 | |
| Q9LY32 | 961 | ATPase 7, plasma membrane | no | no | 0.990 | 0.988 | 0.762 | 0.0 | |
| Q7XPY2 | 951 | Plasma membrane ATPase OS | no | no | 0.983 | 0.991 | 0.760 | 0.0 | |
| P83970 | 951 | Plasma membrane ATPase OS | N/A | no | 0.983 | 0.991 | 0.755 | 0.0 | |
| Q03194 | 952 | Plasma membrane ATPase 4 | N/A | no | 0.985 | 0.992 | 0.751 | 0.0 | |
| Q9M2A0 | 948 | ATPase 8, plasma membrane | no | no | 0.985 | 0.996 | 0.745 | 0.0 |
| >sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1493 bits (3864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 754/955 (78%), Positives = 836/955 (87%), Gaps = 9/955 (0%)
Query: 8 LEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKENKILKFLG 67
LEA+ KE VDLEN+PIEEVFE+L+C+ +GL+++ RL +FGHNKLEEKKE+K LKFLG
Sbjct: 8 LEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKESKFLKFLG 67
Query: 68 FMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNAAAA 127
FMWNPLSWVMEAAA+MAI LA GGGK D+ DFVGI+ LL+INSTISFIEENNAGNAAAA
Sbjct: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 127
Query: 128 LMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
LMARLAPKAKVLRDG+W E+DA++LVPGDIISIKLGDI+PADARLLEGDPLKIDQS+LTG
Sbjct: 128 LMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSSLTG 187
Query: 188 ESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVLTSI 247
ESLPVTK PGDGVYSGSTCKQGE+EAVVIATGVHTFFGKAAHLV++T HVGHFQQVLT+I
Sbjct: 188 ESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHFQQVLTAI 247
Query: 248 GNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+GMIIEI+++Y Q R YR GIDNLLV+LIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 248 GNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTA 367
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK LIE VF GVD D V+L A
Sbjct: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIE-VFTKGVDADTVVLMA 366
Query: 368 ARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRAS 427
A+ASRLENQDAIDAAIV MLADPKEARA + EVHFLPFNPTDKRTALTY D +GKMHR S
Sbjct: 367 AQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGKMHRVS 426
Query: 428 KGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGL 487
KGAPEQILNLA N+A+IE++VH+VIDKFAERGLRSL VA QEVP GTK+S GGPW+F+GL
Sbjct: 427 KGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFMGL 486
Query: 488 LPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKK 547
+PLFDPPRHDSAETIRRAL+LGV+VKMITGDQLAIGKETGRRLGMGTNMYPSSALLG+ K
Sbjct: 487 MPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQHK 546
Query: 548 DTIVG-LPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG 606
D +G LP+DDLIEKADGFAGVFPEHK+EIVKRLQARKHI GMTGDGVNDAPALK ADIG
Sbjct: 547 DESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606
Query: 607 IAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL 666
IAVAD+TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+L
Sbjct: 607 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 666
Query: 667 LTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGSYLAL 726
L IW+FDFPPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVV GSY+A+
Sbjct: 667 LALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFGSYMAM 726
Query: 727 TTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIFVTR 786
TVIFFWA ++TDFF F V +L + K LASA+YLQVS ISQALIFVTR
Sbjct: 727 MTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRK-----LASAIYLQVSIISQALIFVTR 781
Query: 787 SRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYNIIIYML 846
SR WS+ ERPG+LLV AFI+AQLVATLI+ A FA I IGW W +IWLYNI+ Y+
Sbjct: 782 SRSWSYVERPGMLLVVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYIP 841
Query: 847 LDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQSMDAKI- 905
LD IK + YALSGRAW LV +R A T QKDFG+E RE WA QRTLHGLQ+ DAK+
Sbjct: 842 LDIIKFLIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAKMF 901
Query: 906 -DKHAFKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVDHVNPHYTV 959
++ F +++ MAEEA+RRAEI RLRELHTLKG VES +L+GLD++ + YTV
Sbjct: 902 PERTHFNELSQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 956
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 6 |
| >sp|Q08435|PMA1_NICPL Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1491 bits (3859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 758/955 (79%), Positives = 832/955 (87%), Gaps = 9/955 (0%)
Query: 8 LEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKENKILKFLG 67
L+A+ KEAVDLENIPIEEVFENL+CT +GL++ Q RL +FG+NKLEEKK++K+LKFLG
Sbjct: 9 LDAVLKEAVDLENIPIEEVFENLRCTKEGLTATAAQERLAIFGYNKLEEKKDSKLLKFLG 68
Query: 68 FMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNAAAA 127
FMWNPLSWVMEAAA+MAI LA GGGK D+ DFVGI+ LLIINSTISFIEENNAGNAAAA
Sbjct: 69 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENNAGNAAAA 128
Query: 128 LMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
LMARLAPKAKVLRDG+W EEDA+VLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG
Sbjct: 129 LMARLAPKAKVLRDGRWKEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 188
Query: 188 ESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVLTSI 247
ESLPVTK PGDGVYSGSTCKQGEIEA+VIATGVHTFFGKAAHLV+ST VGHFQ+VLT+I
Sbjct: 189 ESLPVTKGPGDGVYSGSTCKQGEIEAIVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248
Query: 248 GNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+GMIIEII++Y Q R YR GIDNLLV+LIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 249 GNFCICSIAVGMIIEIIVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTA 367
L+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK LIE VF GVD DMV+L A
Sbjct: 309 LAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIE-VFAKGVDADMVVLMA 367
Query: 368 ARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRAS 427
ARASR ENQDAIDAAIV MLADPKEARA I E+HFLPFNPTDKRTALTY D GKMHR S
Sbjct: 368 ARASRTENQDAIDAAIVGMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKMHRVS 427
Query: 428 KGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGL 487
KGAPEQILNLA NK+DIE++VH+VIDKFAERGLRSLGVA QEVP G K+S GGPW+FIGL
Sbjct: 428 KGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLGVAYQEVPEGRKESAGGPWQFIGL 487
Query: 488 LPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKK 547
LPLFDPPRHDSAETIRRAL+LGV+VKM+TGDQLAIGKETGRRLGMGTNMYPSSALLG+ K
Sbjct: 488 LPLFDPPRHDSAETIRRALNLGVNVKMVTGDQLAIGKETGRRLGMGTNMYPSSALLGQTK 547
Query: 548 D-TIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG 606
D +I LP+D+LIEKADGFAGVFPEHK+EIVKRLQARKHI GMTGDGVNDAPALK ADIG
Sbjct: 548 DESISALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 607
Query: 607 IAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL 666
IAV D+TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+L
Sbjct: 608 IAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 667
Query: 667 LTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGSYLAL 726
L IW+FDFPPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIF TG+V+G YLA+
Sbjct: 668 LALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGGYLAM 727
Query: 727 TTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIFVTR 786
TVIFFWA ++T+FF + F V +L + K LASA+YLQVS ISQALIFVTR
Sbjct: 728 MTVIFFWAAYKTNFFPHVFGVSTLEKTATDDFRK-----LASAIYLQVSIISQALIFVTR 782
Query: 787 SRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYNIIIYML 846
SR WSF ERPG LLV AF+IAQLVATLI+ A FA I IGW W +IW+YN++ Y+
Sbjct: 783 SRSWSFVERPGFLLVIAFVIAQLVATLIAVYANWSFAAIEGIGWGWAGVIWIYNLVFYIP 842
Query: 847 LDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQSMDAKID 906
LD IK + YALSGRAW LV+ RR A T +KDFG+E RE WA QRTLHGLQ D K+
Sbjct: 843 LDIIKFFIRYALSGRAWDLVFERRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDTKLF 902
Query: 907 KHA--FKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVDHVNPHYTV 959
A F ++N +AEEA+RRAEI RLRELHTLKG VES KL+GLD++ + YTV
Sbjct: 903 SEATNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 957
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P22180|PMA1_SOLLC Plasma membrane ATPase 1 OS=Solanum lycopersicum GN=LHA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1487 bits (3849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 760/955 (79%), Positives = 827/955 (86%), Gaps = 9/955 (0%)
Query: 8 LEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKENKILKFLG 67
L+A+ KE VDLENIPIEEVFENL+CT +GL++ Q RL +FG+NKLEEKKE+K LKFLG
Sbjct: 8 LDAVLKETVDLENIPIEEVFENLRCTREGLTATAAQERLSIFGYNKLEEKKESKFLKFLG 67
Query: 68 FMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNAAAA 127
FMWNPLSWVMEAAA+MAI LA GGGK D+ DFVGI+ LLIINSTISFIEENNAGNAAAA
Sbjct: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENNAGNAAAA 127
Query: 128 LMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
LMARLAPKAKVLRDGKW EEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG
Sbjct: 128 LMARLAPKAKVLRDGKWDEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
Query: 188 ESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVLTSI 247
ESLPVTK PGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV+ST VGHFQ+VLT+I
Sbjct: 188 ESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 247
Query: 248 GNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+GMIIEII++Y Q R YR GIDNLLV+LIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 248 GNFCICSIAVGMIIEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTA 367
L+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK LIE VF G+D D V+L A
Sbjct: 308 LAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKALIE-VFAKGIDADTVVLMA 366
Query: 368 ARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRAS 427
ARASR+ENQDAID AIV MLADPKEARA I E+HFLPFNPTDKRTALTY D GKMHR S
Sbjct: 367 ARASRIENQDAIDTAIVGMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKMHRVS 426
Query: 428 KGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGL 487
KGAPEQILNLA NK+DIE++VH+VIDKFAERGLRSLGVA QEVP G K+S GGPW+FI L
Sbjct: 427 KGAPEQILNLAHNKSDIERRVHTVIDKFAERGLRSLGVAYQEVPEGRKESAGGPWQFIAL 486
Query: 488 LPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKK 547
LPLFDPPRHDSAETIRRAL+LGV+VKMITGDQLAIGKETGRRLGMGTNMYPSSALLG+ K
Sbjct: 487 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQTK 546
Query: 548 D-TIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG 606
D +I LP+D+LIEKADGFAGVFPEHK+EIVKRLQARKHI GMTGDGVNDAPALK ADIG
Sbjct: 547 DESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606
Query: 607 IAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL 666
IAV D+TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+L
Sbjct: 607 IAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 666
Query: 667 LTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGSYLAL 726
L IW+FDFPPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIF TGVV+G YLA+
Sbjct: 667 LALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVLGGYLAM 726
Query: 727 TTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIFVTR 786
TVIFFWA ++T+FF F V +L + K LASA+YLQVSTISQALIFVTR
Sbjct: 727 MTVIFFWAAYKTNFFPRIFGVSTLEKTATDDFRK-----LASAIYLQVSTISQALIFVTR 781
Query: 787 SRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYNIIIYML 846
SR WSF ERPGLLLV AF +AQLVATLI+ A FA I IGW W +IWLYNI+ Y+
Sbjct: 782 SRSWSFVERPGLLLVFAFFVAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVTYIP 841
Query: 847 LDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQSMDAKI- 905
LD IK + YALSG+AW LV +R A T +KDFG+E RE WA QRTLHGLQ D KI
Sbjct: 842 LDLIKFLIRYALSGKAWDLVLEQRIAFTRKKDFGKELRELQWAHAQRTLHGLQVPDPKIF 901
Query: 906 -DKHAFKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVDHVNPHYTV 959
+ F ++N +AEEA+RRAEI RLRELHTLKG VES KL+GLD++ + YTV
Sbjct: 902 SETTNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQSYTV 956
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SU58|PMA4_ARATH ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1484 bits (3843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 753/955 (78%), Positives = 828/955 (86%), Gaps = 9/955 (0%)
Query: 8 LEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKENKILKFLG 67
LEA+ KEAVDLEN+PIEEVFENL+C+ +GL++ RL +FGHNKLEEKKE+K LKFLG
Sbjct: 12 LEAVLKEAVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKESKFLKFLG 71
Query: 68 FMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNAAAA 127
FMWNPLSWVMEAAA+MAI LA GGGK D+ DFVGI+ LL+INSTISFIEENNAGNAAAA
Sbjct: 72 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 131
Query: 128 LMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
LMARLAPKAKVLRDG+W E+DA++LVPGDIISIKLGDI+PADARLLEGDPLKIDQSALTG
Sbjct: 132 LMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTG 191
Query: 188 ESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVLTSI 247
ESLPVTK+ GDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV++T +GHFQQVLT+I
Sbjct: 192 ESLPVTKSSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQIGHFQQVLTAI 251
Query: 248 GNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+GM+IEI+++Y Q R YR GIDNLLV+LIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 252 GNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 311
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTA 367
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK LIE VF GVD D V+L A
Sbjct: 312 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIE-VFMKGVDADTVVLMA 370
Query: 368 ARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRAS 427
ARASRLENQDAIDAAIV MLADPK+ARA I EVHFLPFNPTDKRTALTY D G HR S
Sbjct: 371 ARASRLENQDAIDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVS 430
Query: 428 KGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGL 487
KGAPEQILNLA NK++IE++VH+VIDKFAERGLRSL VA Q+VP G KDS GGPW+F+GL
Sbjct: 431 KGAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGL 490
Query: 488 LPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKK 547
+PLFDPPRHDSAETIRRAL+LGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG+ K
Sbjct: 491 MPLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNK 550
Query: 548 D-TIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG 606
D +IV LPVD+LIEKADGFAGVFPEHK+EIVKRLQARKHI GMTGDGVNDAPALK ADIG
Sbjct: 551 DESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 610
Query: 607 IAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL 666
IAVAD+TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+L
Sbjct: 611 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 670
Query: 667 LTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGSYLAL 726
L IW+FDFPPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVV GSY+A+
Sbjct: 671 LALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFGSYMAM 730
Query: 727 TTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIFVTR 786
TVIFFW ++TDFF F V +L + K LASA+YLQVS ISQALIFVTR
Sbjct: 731 MTVIFFWVSYKTDFFPRTFGVATLEKTAHDDFRK-----LASAIYLQVSIISQALIFVTR 785
Query: 787 SRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYNIIIYML 846
SR WSF ERPG+ L+ AFI+AQLVATLI+ A FA I IGW W +IWLYNII Y+
Sbjct: 786 SRSWSFVERPGIFLMIAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIP 845
Query: 847 LDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQSMDAKI- 905
LD IK + YALSGRAW LV +R A T QKDFG+E RE WA QRTLHGLQ+ D K+
Sbjct: 846 LDFIKFFIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTKMF 905
Query: 906 -DKHAFKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVDHVNPHYTV 959
D+ ++N MAEEA+RRAEI RLRELHTLKG VES +L+GLD++ + YTV
Sbjct: 906 TDRTHVSELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 960
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q08436|PMA3_NICPL Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia GN=PMA3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1479 bits (3828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 758/955 (79%), Positives = 823/955 (86%), Gaps = 9/955 (0%)
Query: 8 LEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKENKILKFLG 67
L+A+ KE VDLENIPIEEVFENL+CT +GL++ Q RL +FG+NKLEEKKE+K KFLG
Sbjct: 8 LDAVLKETVDLENIPIEEVFENLRCTKEGLTATAAQERLSIFGYNKLEEKKESKFSKFLG 67
Query: 68 FMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNAAAA 127
FMWNPLSWVMEAAA+MAI LA GGGK D+ DFVGI+ LLIINSTISFIEENNAGNAAAA
Sbjct: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENNAGNAAAA 127
Query: 128 LMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
LMARLAPKAKVLRDGKW EEDA+VLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG
Sbjct: 128 LMARLAPKAKVLRDGKWKEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
Query: 188 ESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVLTSI 247
ESLPVTK PGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV+ST VGHFQ+VLT+I
Sbjct: 188 ESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 247
Query: 248 GNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+GMIIEII++Y Q R YR GIDNLLV+LIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 248 GNFCICSIAVGMIIEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTA 367
L+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK LIE VF GVD D V+L A
Sbjct: 308 LAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKYLIE-VFARGVDADTVVLMA 366
Query: 368 ARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRAS 427
ARASR ENQDAIDAAIV MLADPKEARA I E+HFLPFNPTDKRTALTY D GKMHR S
Sbjct: 367 ARASRTENQDAIDAAIVGMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKMHRVS 426
Query: 428 KGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGL 487
KGAPEQIL+LA NK+DIE++VH+VIDKFAERGLRSL VA QEVP G K+S GGPW+FI L
Sbjct: 427 KGAPEQILHLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGPWQFIAL 486
Query: 488 LPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKK 547
LPLFDPPRHDSAETIRRAL+LGV+VKMITGDQLAIGKETGRRLGMGTNMYPSSALLG+ K
Sbjct: 487 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQTK 546
Query: 548 D-TIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG 606
D +I LPVD+LIEKADGFAGVFPEHK+EIVKRLQARKHI GMTGDGVNDAPALK ADIG
Sbjct: 547 DESISALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606
Query: 607 IAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL 666
IAV D+TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+L
Sbjct: 607 IAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 666
Query: 667 LTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGSYLAL 726
L IW+FDFPPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIF TGVV+G YLA+
Sbjct: 667 LALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVLGGYLAM 726
Query: 727 TTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIFVTR 786
TVIFFWA ++T+FF F V +L + K LASA+YLQVSTISQALIFVTR
Sbjct: 727 MTVIFFWAAYKTNFFPRVFGVSTLEKTATDDFRK-----LASAIYLQVSTISQALIFVTR 781
Query: 787 SRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYNIIIYML 846
SR WSF ERPGLLLV AF IAQLVATLI+ A FA I IGW W +IWLYNI+ Y+
Sbjct: 782 SRSWSFMERPGLLLVVAFFIAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYIP 841
Query: 847 LDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQSMDAKI- 905
LD + YALSG+AW LV +R A T +KDFG+E RE WA QRTLHGLQ D KI
Sbjct: 842 LDLXXFLIRYALSGKAWDLVIEQRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDPKIF 901
Query: 906 -DKHAFKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVDHVNPHYTV 959
+ F ++N +AEEA+RRAEI RLRELHTLKG VES KL+GLD++ + YTV
Sbjct: 902 SETTNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 956
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9LY32|PMA7_ARATH ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=AHA7 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1476 bits (3822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 731/959 (76%), Positives = 840/959 (87%), Gaps = 9/959 (0%)
Query: 7 ALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKENKILKFL 66
AL+AI+ E++DLEN+P+EEVF++LKCT +GL+S+EVQ RL +FG+NKLEEKKE+KILKFL
Sbjct: 6 ALKAITTESIDLENVPVEEVFQHLKCTKEGLTSNEVQERLTLFGYNKLEEKKESKILKFL 65
Query: 67 GFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNAAA 126
GFMWNPLSWVMEAAALMAI LA GGGK DYHDFVGI+ LL+INSTISF+EENNAGNAAA
Sbjct: 66 GFMWNPLSWVMEAAALMAIGLAHGGGKPADYHDFVGIVVLLLINSTISFVEENNAGNAAA 125
Query: 127 ALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALT 186
ALMA+LAPKAK +RDGKW+E DA+ LVPGDI+SIKLGDIIPADARLLEGDPLKIDQ+ LT
Sbjct: 126 ALMAQLAPKAKAVRDGKWNEIDAAELVPGDIVSIKLGDIIPADARLLEGDPLKIDQATLT 185
Query: 187 GESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVLTS 246
GESLPVTKNPG VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV+STTHVGHFQ+VLT+
Sbjct: 186 GESLPVTKNPGASVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTTHVGHFQKVLTA 245
Query: 247 IGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSH 306
IGNFCICSIA+GM IEI++IYG Q+RGYRVGIDNLLV+LIGGIPIAMPTVLSVTMAIG+H
Sbjct: 246 IGNFCICSIAVGMAIEIVVIYGLQKRGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGAH 305
Query: 307 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILT 366
RL+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK LIE VF G+D+DM +L
Sbjct: 306 RLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIE-VFKRGIDRDMAVLM 364
Query: 367 AARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRA 426
AARA+RLENQDAID AIVSML+DPKEARA I E+HFLPF+P ++RTALTY D GKMHR
Sbjct: 365 AARAARLENQDAIDTAIVSMLSDPKEARAGIKELHFLPFSPANRRTALTYLDGEGKMHRV 424
Query: 427 SKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIG 486
SKGAPE+IL++A NK +I++KVH+ IDKFAERGLRSLG+A QEVP G GGPW+F+
Sbjct: 425 SKGAPEEILDMAHNKLEIKEKVHATIDKFAERGLRSLGLAYQEVPDGDVKGEGGPWDFVA 484
Query: 487 LLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEK 546
LLPLFDPPRHDSA+TI RAL LGVSVKMITGDQLAI KETGRRLGMGTNMYPSS+LL +
Sbjct: 485 LLPLFDPPRHDSAQTIERALHLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLSD- 543
Query: 547 KDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG 606
+ G+ VD+LIE ADGFAGVFPEHK+EIVKRLQ+RKHI GMTGDGVNDAPALK ADIG
Sbjct: 544 -NNTEGVSVDELIENADGFAGVFPEHKYEIVKRLQSRKHICGMTGDGVNDAPALKKADIG 602
Query: 607 IAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL 666
IAV D+TDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV+GF+L
Sbjct: 603 IAVDDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVMGFML 662
Query: 667 LTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGSYLAL 726
L WEFDFPPFMVL+IAILNDGTIMTISKDRVKPSP+PD WKL+EIFATGVV+G+YLA+
Sbjct: 663 LCVFWEFDFPPFMVLVIAILNDGTIMTISKDRVKPSPTPDCWKLKEIFATGVVLGAYLAI 722
Query: 727 TTVIFFWAIFETDFFQNHFHVQSLRNS----GGKKIPKVLNGQLASAVYLQVSTISQALI 782
TV+FFWA +ET+FF N FHV++ KK+ LN Q+ASAVYLQVSTISQALI
Sbjct: 723 MTVVFFWAAYETNFFHNIFHVRNFNQHHFKMKDKKVAAHLNEQMASAVYLQVSTISQALI 782
Query: 783 FVTRSRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYNII 842
FVTRSR WSF ERPG LLV AF+IAQLVA++ISA+A FAGI IGW WT +IW++NI+
Sbjct: 783 FVTRSRSWSFVERPGFLLVIAFLIAQLVASVISAMANWPFAGIRSIGWGWTGVIWIFNIV 842
Query: 843 IYMLLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQSMD 902
YMLLDPIK V YALSG++W + RTALT +K+FG+E R AAWA+E+RT HGL++
Sbjct: 843 TYMLLDPIKFLVRYALSGKSWDRMVEGRTALTGKKNFGQEERMAAWATEKRTQHGLETGQ 902
Query: 903 AKI-DKHAFKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVDHVNP-HYTV 959
+ ++++ ++N MAEEA+RRAEI R+REL TLKGKVES AKL+G D++ N +YT+
Sbjct: 903 KPVYERNSATELNNMAEEAKRRAEIARMRELQTLKGKVESAAKLKGYDLEDPNSNNYTI 961
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1439 bits (3726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 729/959 (76%), Positives = 823/959 (85%), Gaps = 16/959 (1%)
Query: 7 ALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKENKILKFL 66
LE I EAVDLENIPIEEVFE LKCT +GLSS+E R+E+FG NKLEEKKE+KILKFL
Sbjct: 3 GLEEIKNEAVDLENIPIEEVFEQLKCTREGLSSEEGNRRIEMFGPNKLEEKKESKILKFL 62
Query: 67 GFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNAAA 126
GFMWNPLSWVME AA+MAI LA GGGK D+ DFVGI+ LL+INSTISFIEENNAGNAAA
Sbjct: 63 GFMWNPLSWVMEMAAIMAIALANGGGKPPDWEDFVGIIVLLVINSTISFIEENNAGNAAA 122
Query: 127 ALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALT 186
ALMA LAPK KVLRDG+W E++A++LVPGDIISIKLGDI+PADARLLEGDPLKIDQSALT
Sbjct: 123 ALMANLAPKTKVLRDGRWGEQEAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALT 182
Query: 187 GESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVLTS 246
GESLPVTKNPGD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLV+ST VGHFQ VLT+
Sbjct: 183 GESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQTVLTA 242
Query: 247 IGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSH 306
IGNFCICSIA+G++IEII+++ Q R YR GI+NLLV+LIGGIPIAMPTVLSVTMAIGSH
Sbjct: 243 IGNFCICSIAVGIVIEIIVMFPIQHRAYRSGIENLLVLLIGGIPIAMPTVLSVTMAIGSH 302
Query: 307 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILT 366
+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK L+E VF GVDKD V+L
Sbjct: 303 KLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE-VFTKGVDKDHVLLL 361
Query: 367 AARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRA 426
AARASR ENQDAIDAA+V MLADPKEARA I EVHFLPFNP DKRTALTY D +G HRA
Sbjct: 362 AARASRTENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGNWHRA 421
Query: 427 SKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIG 486
SKGAPEQIL L K D+++KVH+VIDK+AERGLRSL VARQEVP +K+S GGPW+F+G
Sbjct: 422 SKGAPEQILTLCNCKEDVKRKVHAVIDKYAERGLRSLAVARQEVPEKSKESAGGPWQFVG 481
Query: 487 LLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEK 546
LLPLFDPPRHDSAETIR+AL LGV+VKMITGDQLAIGKETGRRLGMGTNMYPSSALLG+
Sbjct: 482 LLPLFDPPRHDSAETIRKALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQN 541
Query: 547 KD-TIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADI 605
KD ++ LPVD+LIEKADGFAGVFPEHK+EIVKRLQ +KHIVGMTGDGVNDAPALK ADI
Sbjct: 542 KDASLEALPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADI 601
Query: 606 GIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFL 665
GIAVAD+TDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIRIVLGFL
Sbjct: 602 GIAVADATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGFL 661
Query: 666 LLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGSYLA 725
L+ IW++DF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFATG+V+GSYLA
Sbjct: 662 LIALIWKYDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGSYLA 721
Query: 726 LTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIFVT 785
L TVIFFWA+ +TDFF + F V+S+RNS ++ SA+YLQVS +SQALIFVT
Sbjct: 722 LMTVIFFWAMHKTDFFTDKFGVRSIRNS---------EHEMMSALYLQVSIVSQALIFVT 772
Query: 786 RSRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYNIIIYM 845
RSR WSF ERPGLLLVTAF++AQLVAT ++ A FA I IGW W +IWLY+I+ Y
Sbjct: 773 RSRSWSFIERPGLLLVTAFMLAQLVATFLAVYANWGFARIKGIGWGWAGVIWLYSIVFYF 832
Query: 846 LLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQSMDAKI 905
LD K + + LSGRAW + + A T +KD+GRE REA WA+ QRTLHGLQ +
Sbjct: 833 PLDIFKFFIRFVLSGRAWDNLLENKIAFTTKKDYGREEREAQWATAQRTLHGLQPPEVAS 892
Query: 906 -----DKHAFKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVDHVNPHYTV 959
DK ++++++ +AE+A+RRAEI RLREL+TLKG VES KL+GLD+D + +YTV
Sbjct: 893 NTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIQQNYTV 951
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P83970|PMA1_WHEAT Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1434 bits (3712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 725/959 (75%), Positives = 823/959 (85%), Gaps = 16/959 (1%)
Query: 7 ALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKENKILKFL 66
LE I EAVDLENIPIEEVFE LKCT GL+SDE R+E+FG NKLEEKKE+K+LKFL
Sbjct: 3 GLEEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKESKVLKFL 62
Query: 67 GFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNAAA 126
GFMWNPLSWVME AA+MAI LA GGGK D+ DFVGI+ LL+INSTISFIEENNAGNAAA
Sbjct: 63 GFMWNPLSWVMEMAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEENNAGNAAA 122
Query: 127 ALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALT 186
ALMA LAPK KVLRDG+W E++AS+LVPGDI+SIKLGDI+PADARLLEGDPLKIDQS LT
Sbjct: 123 ALMANLAPKTKVLRDGRWGEQEASILVPGDIVSIKLGDIVPADARLLEGDPLKIDQSGLT 182
Query: 187 GESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVLTS 246
GESLPVTKNPGD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLV+ST VGHFQQVLT+
Sbjct: 183 GESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQQVLTA 242
Query: 247 IGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSH 306
IGNFCI SIA+G++IEII+++ Q R YR GI+NLLV+LIGGIPIAMPTVLSVTMAIGSH
Sbjct: 243 IGNFCIVSIAVGIVIEIIVMFPIQRRKYRAGIENLLVLLIGGIPIAMPTVLSVTMAIGSH 302
Query: 307 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILT 366
+LSQQGAITKRMTAIEE+AGMDVLCSDKTGTLTLNKL+VDK L+E VF GVDK+ V+L
Sbjct: 303 KLSQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLSVDKNLVE-VFAKGVDKEHVLLL 361
Query: 367 AARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRA 426
AARASR+ENQDAIDA +V MLADPKEARA I EVHFLPFNPTDKRTALTY D G HRA
Sbjct: 362 AARASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDAEGNWHRA 421
Query: 427 SKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIG 486
SKGAPEQI+ L K D+++KVHSVI+K+AERGLRSL VARQEVP +KDSPGGPW+FIG
Sbjct: 422 SKGAPEQIITLCNCKEDVKRKVHSVIEKYAERGLRSLAVARQEVPEKSKDSPGGPWQFIG 481
Query: 487 LLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEK 546
LLPLFDPPRHDSAETIR+AL LGV+VKMITGDQLAIGKETGRRLGMGTNMYPSSALLG+
Sbjct: 482 LLPLFDPPRHDSAETIRKALVLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQS 541
Query: 547 KD-TIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADI 605
KD ++ LPVD+LIEKADGFAGVFPEHK+EIVKRLQ +KHIVGMTGDGVNDAPALK ADI
Sbjct: 542 KDGSLESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADI 601
Query: 606 GIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFL 665
GIAV D+TDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIRIVLGF+
Sbjct: 602 GIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGFM 661
Query: 666 LLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGSYLA 725
L+ IW+FDF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVV+G+YLA
Sbjct: 662 LIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVVLGTYLA 721
Query: 726 LTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIFVT 785
L TV+FFW I +TDFF N F V+S+RN+ K++ SA+YLQVS +SQALIFVT
Sbjct: 722 LVTVVFFWLIHKTDFFTNKFGVESIRNTEFKEM---------SALYLQVSIVSQALIFVT 772
Query: 786 RSRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYNIIIYM 845
RSR WSF ERPG LLVTAF++AQLVATLI+ A DFA I IGW W +IWL++I+ Y
Sbjct: 773 RSRSWSFVERPGFLLVTAFLLAQLVATLIAVYANWDFARIKGIGWGWAGVIWLFSIVFYF 832
Query: 846 LLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQSMDAKI 905
LD K + + LSGRAW + +TA T ++++G+ REA WA+ QRTLHGLQ+ +
Sbjct: 833 PLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPAS 892
Query: 906 -----DKHAFKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVDHVNPHYTV 959
DK ++++++ +AE+A+RRAEI RLREL+TLKG VES KL+GLD+D +N +YTV
Sbjct: 893 HTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 951
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Triticum aestivum (taxid: 4565) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1432 bits (3707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 721/959 (75%), Positives = 827/959 (86%), Gaps = 14/959 (1%)
Query: 5 AIALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKENKILK 64
AI+LE I E VDLE IPIEEVFE LKCT +GLS+DE SRL++FG NKLEEK E+KILK
Sbjct: 4 AISLEEIKNETVDLEKIPIEEVFEQLKCTREGLSADEGASRLQIFGPNKLEEKNESKILK 63
Query: 65 FLGFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNA 124
FLGFMWNPLSWVMEAAA+MAI LA G GK D+ DF+GI+ LL+INSTISFIEENNAGNA
Sbjct: 64 FLGFMWNPLSWVMEAAAVMAIALANGDGKPPDWQDFIGIICLLVINSTISFIEENNAGNA 123
Query: 125 AAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSA 184
AAALMA LAPK KVLRDG+WSE++A++LVPGDIIS+KLGDIIPADARLLEGDPLKIDQSA
Sbjct: 124 AAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSA 183
Query: 185 LTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVL 244
LTGESLPVTKNPGD V+SGSTCKQGE+EAVVIATGVHTFFGKAAHLV+ST +VGHFQ+VL
Sbjct: 184 LTGESLPVTKNPGDEVFSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVL 243
Query: 245 TSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIG 304
T+IGNFCICSIAIGM++EII++Y Q R YR GIDNLLV+LIGGIPIAMPTVLSVTMAIG
Sbjct: 244 TAIGNFCICSIAIGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 303
Query: 305 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVI 364
SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+ L+E VF GVDK+ V+
Sbjct: 304 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVE-VFAKGVDKEYVL 362
Query: 365 LTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMH 424
L AARASR+ENQDAIDA +V MLADPKEARA I EVHFLPFNP DKRTALTY D N H
Sbjct: 363 LLAARASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDNNNNWH 422
Query: 425 RASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEF 484
RASKGAPEQIL+L K D+ +KVHS++DK+AERGLRSL VAR+ VP +K+SPGG WEF
Sbjct: 423 RASKGAPEQILDLCNAKEDVRRKVHSMMDKYAERGLRSLAVARRTVPEKSKESPGGRWEF 482
Query: 485 IGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG 544
+GLLPLFDPPRHDSAETIRRAL+LGV+VKMITGDQLAI KETGRRLGMGTNMYPS++LLG
Sbjct: 483 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLG 542
Query: 545 EKKDT-IVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVA 603
+ KD+ I LP+++LIEKADGFAGVFPEHK+EIVK+LQ RKHIVGMTGDGVNDAPALK A
Sbjct: 543 QDKDSAIASLPIEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKA 602
Query: 604 DIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 663
DIGIAVAD+TDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV G
Sbjct: 603 DIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFG 662
Query: 664 FLLLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGSY 723
F+ + IW++DF FMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFATGVV+G Y
Sbjct: 663 FMFIALIWKYDFSAFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGVVLGGY 722
Query: 724 LALTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIF 783
AL TV+FFWA+ +TDFF + F V+SLRNS + ++ SA+YLQVS ISQALIF
Sbjct: 723 QALMTVVFFWAMHDTDFFSDKFGVKSLRNS---------DEEMMSALYLQVSIISQALIF 773
Query: 784 VTRSRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYNIII 843
VTRSR WSF ERPG+LLV AF+IAQLVATLI+ A FA + GW W +IWLY+II
Sbjct: 774 VTRSRSWSFLERPGMLLVIAFMIAQLVATLIAVYANWAFARVKGCGWGWAGVIWLYSIIF 833
Query: 844 YMLLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQSMDA 903
Y+ LD +K A+ Y LSG+AW+ + + +TA T +KD+G+E REA WA QRTLHGLQ +A
Sbjct: 834 YLPLDIMKFAIRYILSGKAWNNLLDNKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEA 893
Query: 904 K---IDKHAFKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVDHVNPHYTV 959
+K+++++++ +AE+A+RRAE+ RLRELHTLKG VES KL+GLD++ + HYTV
Sbjct: 894 TNLFNEKNSYRELSEIAEQAKRRAEMARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=AHA8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1419 bits (3672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 713/957 (74%), Positives = 811/957 (84%), Gaps = 12/957 (1%)
Query: 4 TAIALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKENKIL 63
T + + I KE VDLE IP+EEVFE LKC+ +GLSSDE RLE+FG NKLEEK ENK L
Sbjct: 3 TEFSWDEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFL 62
Query: 64 KFLGFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENNAGN 123
KFLGFMWNPLSWVME+AA+MAI LA GGGK D+ DF+GI+ LLIINSTISFIEENNAGN
Sbjct: 63 KFLGFMWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGN 122
Query: 124 AAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQS 183
AAAALMA LAPK KVLRDGKW E++AS+LVPGD+ISIKLGDI+PADARLLEGDPLKIDQS
Sbjct: 123 AAAALMANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQS 182
Query: 184 ALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQV 243
ALTGESLP TK+PGD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLV+ST +VGHFQ+V
Sbjct: 183 ALTGESLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKV 242
Query: 244 LTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAI 303
LTSIGNFCICSI +GM+IEI+I+Y Q R YR GIDNLLV+LIGGIPIAMPTVLSVTMAI
Sbjct: 243 LTSIGNFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 302
Query: 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMV 363
GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK LIE VF +D D V
Sbjct: 303 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIE-VFPKNMDSDSV 361
Query: 364 ILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKM 423
+L AARASR+ENQDAIDA+IV ML DPKEARA ITEVHFLPFNP DKRTA+TY D++G
Sbjct: 362 VLMAARASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDW 421
Query: 424 HRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWE 483
HR+SKGAPEQI+ L + + ++K H VID FAERGLRSLGVA+Q VP TK+S G PWE
Sbjct: 422 HRSSKGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWE 481
Query: 484 FIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 543
F+GLLPLFDPPRHDSAETIRRAL+LGV+VKMITGDQLAIG ETGRRLGMGTNMYPS++LL
Sbjct: 482 FVGLLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLL 541
Query: 544 GEKKD-TIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKV 602
G KD ++VG+P+D+LIEKADGFAGVFPEHK+EIVK+LQ RKHI GMTGDGVNDAPALK
Sbjct: 542 GNSKDESLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKK 601
Query: 603 ADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 662
ADIGIAVAD+TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL
Sbjct: 602 ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 661
Query: 663 GFLLLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGS 722
GF+L+ IW FDF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVV+G+
Sbjct: 662 GFMLVALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGT 721
Query: 723 YLALTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALI 782
Y+ALTTV+FFW +TDFF F V+S++ + +L +A+YLQVS ISQALI
Sbjct: 722 YMALTTVLFFWLAHDTDFFSKTFGVRSIQGN---------EEELMAALYLQVSIISQALI 772
Query: 783 FVTRSRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYNII 842
FVTRSR WSF ERPG LL+ AF+IAQLVATLI+ A FA I GW W IW+Y+II
Sbjct: 773 FVTRSRSWSFVERPGFLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSII 832
Query: 843 IYMLLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQSMD 902
Y+ LD +K + YAL+G+AW + N++TA T +KD+G+ REA WA QRTLHGL +
Sbjct: 833 TYIPLDILKFIIRYALTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPE 892
Query: 903 AKIDKHAFKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVDHVNPHYTV 959
A + + +++ +AE+A+RRAE+ RLRELHTLKG VES KL+GLD+D + HYTV
Sbjct: 893 AMFNDNK-NELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 959 | ||||||
| 224074203 | 961 | autoinhibited H+ ATPase [Populus trichoc | 0.995 | 0.993 | 0.856 | 0.0 | |
| 224136478 | 965 | autoinhibited H+ ATPase [Populus trichoc | 0.998 | 0.992 | 0.833 | 0.0 | |
| 225453404 | 958 | PREDICTED: ATPase 7, plasma membrane-typ | 0.992 | 0.993 | 0.843 | 0.0 | |
| 359489194 | 968 | PREDICTED: ATPase 7, plasma membrane-typ | 0.998 | 0.989 | 0.841 | 0.0 | |
| 356520780 | 960 | PREDICTED: plasma membrane ATPase 1-like | 0.998 | 0.997 | 0.819 | 0.0 | |
| 356520782 | 966 | PREDICTED: plasma membrane ATPase 1-like | 0.998 | 0.991 | 0.814 | 0.0 | |
| 5669157 | 966 | plasma membrane proton ATPase [Nicotiana | 0.997 | 0.990 | 0.819 | 0.0 | |
| 356504579 | 960 | PREDICTED: plasma membrane ATPase 1-like | 0.998 | 0.997 | 0.818 | 0.0 | |
| 356504581 | 965 | PREDICTED: plasma membrane ATPase 1-like | 0.998 | 0.992 | 0.813 | 0.0 | |
| 7378771 | 966 | H+-ATPase [Medicago truncatula] | 0.998 | 0.991 | 0.807 | 0.0 |
| >gi|224074203|ref|XP_002304299.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222841731|gb|EEE79278.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1639 bits (4244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 827/965 (85%), Positives = 885/965 (91%), Gaps = 10/965 (1%)
Query: 1 MDKTAIALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKEN 60
MD TA ALEAISKE VDLEN+PIEEVFE LKCT +GLS D+VQ RL VFG+NKLEEKKE+
Sbjct: 1 MDNTANALEAISKETVDLENVPIEEVFEKLKCTKEGLSDDDVQKRLGVFGYNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENN 120
KILKFLGFMWNPLSWVMEAAA+MAI LA GGGK DYHDF+GIL LLIINSTISFIEENN
Sbjct: 61 KILKFLGFMWNPLSWVMEAAAIMAIALAHGGGKGTDYHDFIGILTLLIINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPKAKVLRDGKW EE+A+ LVPGDI+SIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGKWREEEAAELVPGDIVSIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHF 240
DQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVE+TTHVGHF
Sbjct: 181 DQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHVGHF 240
Query: 241 QQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVT 300
Q+VLT+IGNFCICSIAIGM+IEII++YG Q R YRVGIDNLLV+LIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAIGMLIEIIVMYGIQGRAYRVGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDK 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK +IEV F VDK
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMIEV-FSKEVDK 359
Query: 361 DMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKN 420
DMV+L AARASRLENQDAIDAAIVSMLADPKEARA ITEVHFLPFNPTDKRTALTY D
Sbjct: 360 DMVVLMAARASRLENQDAIDAAIVSMLADPKEARAGITEVHFLPFNPTDKRTALTYLDSA 419
Query: 421 GKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGG 480
GKMHR SKGAPEQILNLAWNK+DIE++VHS+IDKFAERGLRSLGVARQEVPAG KDSPGG
Sbjct: 420 GKMHRVSKGAPEQILNLAWNKSDIERRVHSIIDKFAERGLRSLGVARQEVPAGNKDSPGG 479
Query: 481 PWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWEF+GLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 480 PWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSS 539
Query: 541 ALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPAL 600
+LLGE KD + LP+D+LIE ADGFAGVFPEHK+EIVKRLQA+KHIVGMTGDGVNDAPAL
Sbjct: 540 SLLGENKDGVGALPIDELIENADGFAGVFPEHKYEIVKRLQAKKHIVGMTGDGVNDAPAL 599
Query: 601 KVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
K+ADIGIAVAD+TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 600 KIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 659
Query: 661 VLGFLLLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVI 720
V+GF+LL W+FDFPPFMVLIIA+LNDGTIMTISKDRVKPSP PD WKL EIFATG+VI
Sbjct: 660 VMGFMLLAVFWKFDFPPFMVLIIAVLNDGTIMTISKDRVKPSPIPDCWKLSEIFATGIVI 719
Query: 721 GSYLALTTVIFFWAIFETDFFQNHFHVQSLRNS---GGKKIPKVLNGQLASAVYLQVSTI 777
GSYLA+ TV+FFW F+TDFF HFHV+S K + K LNGQLASAVYLQVSTI
Sbjct: 720 GSYLAVMTVVFFWMAFKTDFFPKHFHVKSFNQHLDLSDKVLSKELNGQLASAVYLQVSTI 779
Query: 778 SQALIFVTRSRGWSFTERPGLLLVTAFIIAQLVATLISALATS-DFAGIHKIGWRWTSII 836
SQALIFVTRSR WS+ ERPGLLL++AFIIAQLV S LAT+ DFAGI KIGWRWT++I
Sbjct: 780 SQALIFVTRSRSWSYKERPGLLLLSAFIIAQLVNA--SKLATTWDFAGISKIGWRWTAVI 837
Query: 837 WLYNIIIYMLLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLH 896
WLYNI+ Y LLDPIK AV YA SGRAWSLVYN+RTA+T QKDFG+EAR+AAWA+EQRTLH
Sbjct: 838 WLYNIVTYKLLDPIKFAVRYAQSGRAWSLVYNQRTAMTTQKDFGKEARKAAWAAEQRTLH 897
Query: 897 GLQSMDAK--IDKHAFKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVDHVN 954
GLQSM+AK +KH F+DINIMAEEARRRAEI RLRELHTLKGKVES AKLRGLD+D VN
Sbjct: 898 GLQSMEAKSFSEKHTFRDINIMAEEARRRAEIARLRELHTLKGKVESIAKLRGLDID-VN 956
Query: 955 PHYTV 959
PHYTV
Sbjct: 957 PHYTV 961
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224136478|ref|XP_002326870.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222835185|gb|EEE73620.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1616 bits (4185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 805/966 (83%), Positives = 882/966 (91%), Gaps = 8/966 (0%)
Query: 1 MDKTAIALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKEN 60
M + +IAL+AI+KEAVDLENIP+EEVF+NLKCT +GL+++EV+ RL++FG+NKLEEKKE+
Sbjct: 1 MVENSIALDAINKEAVDLENIPLEEVFDNLKCTREGLTANEVRERLDLFGYNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENN 120
K+LKFLGFMWNPLSWVMEAAA+MAI LA GG K DYHDFVGI+ LLIINSTISFIEENN
Sbjct: 61 KLLKFLGFMWNPLSWVMEAAAIMAIGLAHGGNKSADYHDFVGIITLLIINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPKAKVLRDG+WSEE+ASVLVPGDI+SIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWSEEEASVLVPGDIVSIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHF 240
DQSALTGESLPVTK+PGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVE+TTHVGHF
Sbjct: 181 DQSALTGESLPVTKSPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHVGHF 240
Query: 241 QQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVT 300
Q+VLT+IGNFCICSIA GM+IEII+IYG QERGYRVGIDNLLV+LIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAAGMVIEIIVIYGIQERGYRVGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDK 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK +IE VF GVDK
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNMIE-VFAKGVDK 359
Query: 361 DMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKN 420
DMV+L AARASRLENQDAID AIVSMLADPKEARA I EVHFLPFNPTDKRTALTY D
Sbjct: 360 DMVVLMAARASRLENQDAIDCAIVSMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDAA 419
Query: 421 GKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGG 480
GKMHR SKGAPEQIL+LA NK +IE++VHS+IDKFAERGLRSL VARQ VPAGTKDSPGG
Sbjct: 420 GKMHRVSKGAPEQILHLAHNKTEIERRVHSIIDKFAERGLRSLAVARQGVPAGTKDSPGG 479
Query: 481 PWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWEF+GLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAI KETGRRLGMGTNMYPSS
Sbjct: 480 PWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSS 539
Query: 541 ALLGEKKDTIV-GLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPA 599
+LLGE KD V GLP+D+LIEKADGFAGVFPEHK+EIV+RLQARKHI GMTGDGVNDAPA
Sbjct: 540 SLLGEGKDDAVGGLPIDELIEKADGFAGVFPEHKYEIVRRLQARKHICGMTGDGVNDAPA 599
Query: 600 LKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 659
LK ADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 600 LKKADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 659
Query: 660 IVLGFLLLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVV 719
IVLGF+LLT W+FDFPPFMVL+IAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVV
Sbjct: 660 IVLGFMLLTVFWKFDFPPFMVLVIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVV 719
Query: 720 IGSYLALTTVIFFWAIFETDFFQNHFHVQSLR----NSGGKKIPKVLNGQLASAVYLQVS 775
+GSYLAL +V+FFW +ET+FF HF+V+ N +KI L QLASAVYLQVS
Sbjct: 720 LGSYLALMSVVFFWLAYETNFFPEHFNVRDFNQHHFNMTDEKIANQLKEQLASAVYLQVS 779
Query: 776 TISQALIFVTRSRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSI 835
TISQALIFVTRSR WSF ERPGLLLV+AFIIAQL+AT+ISA AT FAGI IGW WT++
Sbjct: 780 TISQALIFVTRSRSWSFRERPGLLLVSAFIIAQLIATVISATATWKFAGIRSIGWGWTAV 839
Query: 836 IWLYNIIIYMLLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTL 895
IW+YNI+ Y LLDPIK AV YALSGRAW+ + ++RTA T +KDFG+EAR AAWA+EQRTL
Sbjct: 840 IWVYNILTYFLLDPIKFAVRYALSGRAWNNIIDQRTAFTNKKDFGKEARSAAWAAEQRTL 899
Query: 896 HGLQSMDAKI--DKHAFKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVDHV 953
HGLQS + K+ +++ F+DIN+MAEEA+RRAEI R+RELHTLKGKVESFAKLRGLD+D +
Sbjct: 900 HGLQSAETKMFSERNTFRDINLMAEEAKRRAEIARVRELHTLKGKVESFAKLRGLDIDSM 959
Query: 954 NPHYTV 959
N HYTV
Sbjct: 960 NQHYTV 965
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225453404|ref|XP_002274074.1| PREDICTED: ATPase 7, plasma membrane-type isoform 1 [Vitis vinifera] gi|297734605|emb|CBI16656.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1599 bits (4141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 814/965 (84%), Positives = 874/965 (90%), Gaps = 13/965 (1%)
Query: 1 MDKTAIAL-EAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKE 59
MD+ +IAL EAI+KEAVDLENIP+EEVFE+LKCT +GLS + Q RL++FG+NKLEE KE
Sbjct: 1 MDEKSIALDEAINKEAVDLENIPLEEVFEHLKCTREGLSHEAFQQRLDLFGYNKLEEIKE 60
Query: 60 NKILKFLGFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEEN 119
NKILKFLGFMWNPLSWVMEAAA+MAI LA GGGK DYHDFVGI+ LLI+NSTISF+EEN
Sbjct: 61 NKILKFLGFMWNPLSWVMEAAAVMAIALAHGGGKPTDYHDFVGIIILLIVNSTISFVEEN 120
Query: 120 NAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLK 179
NAGNAAAALMARLAPKAKVLRDGKWSEEDA+VLVPGDIISIKLGDIIPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMARLAPKAKVLRDGKWSEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLK 180
Query: 180 IDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGH 239
IDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVE+TTHVGH
Sbjct: 181 IDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVETTTHVGH 240
Query: 240 FQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSV 299
FQ+VLT+IGNFCICSIA GM IEI++IYG QER YRVGIDNLLV+LIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAFGMAIEIVVIYGLQEREYRVGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 300 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVD 359
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK +IE VF GVD
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNMIE-VFAKGVD 359
Query: 360 KDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDK 419
KDMV+L AARASRLENQDAIDAAIVSMLADPKEARA ITE+HFLPFNPTDKRTALTY D
Sbjct: 360 KDMVVLMAARASRLENQDAIDAAIVSMLADPKEARAGITEIHFLPFNPTDKRTALTYIDG 419
Query: 420 NGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPG 479
GKMHR SKGAPEQILNLA NK++IE+KVHS+IDKFAERGLRSLGVARQEVPAG K+S G
Sbjct: 420 AGKMHRVSKGAPEQILNLAHNKSEIERKVHSIIDKFAERGLRSLGVARQEVPAGNKESSG 479
Query: 480 GPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPS 539
PWEF+GLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPS
Sbjct: 480 APWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPS 539
Query: 540 SALLGEKKDTIV-GLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAP 598
S+LLGE KD V LP+DDLIEKADGFAGVFPEHK+EIVKRLQAR HI GMTGDGVNDAP
Sbjct: 540 SSLLGENKDEAVSALPIDDLIEKADGFAGVFPEHKYEIVKRLQARNHICGMTGDGVNDAP 599
Query: 599 ALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 658
ALK ADIGIAVADSTDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI
Sbjct: 600 ALKKADIGIAVADSTDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 659
Query: 659 RIVLGFLLLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGV 718
RIVLGF+LLT WEFDFPPFMVL+IAILNDGTIMTISKDRVKPSP PDSWKL EIF TGV
Sbjct: 660 RIVLGFMLLTCFWEFDFPPFMVLVIAILNDGTIMTISKDRVKPSPLPDSWKLTEIFTTGV 719
Query: 719 VIGSYLALTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTIS 778
V+G+YLAL TV FF+ +ET+FF +HF N + I L QLASAVYLQVSTIS
Sbjct: 720 VLGAYLALMTVFFFYVTYETNFFTHHF------NMTNETIAIELKEQLASAVYLQVSTIS 773
Query: 779 QALIFVTRSRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWL 838
QALIFVTRSR WSFTERPGLLLVTAFIIAQL+AT+ISA AT FAGI KIGW WT+IIW+
Sbjct: 774 QALIFVTRSRNWSFTERPGLLLVTAFIIAQLIATVISATATWKFAGIRKIGWGWTAIIWV 833
Query: 839 YNIIIYMLLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGL 898
YNI+ Y+LLDPIK AV YALSGRAW LV N+RTA T QKDFG+EAREA WA+EQRTLHGL
Sbjct: 834 YNILTYLLLDPIKFAVRYALSGRAWGLVVNQRTAFTNQKDFGKEAREAKWAAEQRTLHGL 893
Query: 899 QSMDAK---IDKHAFKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVD-HVN 954
QS + + F+DIN+MAEEARRRAEI+RLREL TLKG+VESFAKLRGLD+D ++N
Sbjct: 894 QSAEMASMFSQRGTFRDINLMAEEARRRAEISRLRELRTLKGRVESFAKLRGLDIDSNIN 953
Query: 955 PHYTV 959
PHYTV
Sbjct: 954 PHYTV 958
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359489194|ref|XP_003633895.1| PREDICTED: ATPase 7, plasma membrane-type isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1596 bits (4133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 815/969 (84%), Positives = 874/969 (90%), Gaps = 11/969 (1%)
Query: 1 MDKTAIAL-EAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKE 59
MD+ +IAL EAI+KEAVDLENIP+EEVFE+LKCT +GLS + Q RL++FG+NKLEE KE
Sbjct: 1 MDEKSIALDEAINKEAVDLENIPLEEVFEHLKCTREGLSHEAFQQRLDLFGYNKLEEIKE 60
Query: 60 NKILKFLGFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEEN 119
NKILKFLGFMWNPLSWVMEAAA+MAI LA GGGK DYHDFVGI+ LLI+NSTISF+EEN
Sbjct: 61 NKILKFLGFMWNPLSWVMEAAAVMAIALAHGGGKPTDYHDFVGIIILLIVNSTISFVEEN 120
Query: 120 NAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLK 179
NAGNAAAALMARLAPKAKVLRDGKWSEEDA+VLVPGDIISIKLGDIIPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMARLAPKAKVLRDGKWSEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLK 180
Query: 180 IDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGH 239
IDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVE+TTHVGH
Sbjct: 181 IDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVETTTHVGH 240
Query: 240 FQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSV 299
FQ+VLT+IGNFCICSIA GM IEI++IYG QER YRVGIDNLLV+LIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAFGMAIEIVVIYGLQEREYRVGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 300 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVD 359
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK +IE VF GVD
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNMIE-VFAKGVD 359
Query: 360 KDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDK 419
KDMV+L AARASRLENQDAIDAAIVSMLADPKEARA ITE+HFLPFNPTDKRTALTY D
Sbjct: 360 KDMVVLMAARASRLENQDAIDAAIVSMLADPKEARAGITEIHFLPFNPTDKRTALTYIDG 419
Query: 420 NGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPG 479
GKMHR SKGAPEQILNLA NK++IE+KVHS+IDKFAERGLRSLGVARQEVPAG K+S G
Sbjct: 420 AGKMHRVSKGAPEQILNLAHNKSEIERKVHSIIDKFAERGLRSLGVARQEVPAGNKESSG 479
Query: 480 GPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPS 539
PWEF+GLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPS
Sbjct: 480 APWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPS 539
Query: 540 SALLGEKKDTIV-GLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAP 598
S+LLGE KD V LP+DDLIEKADGFAGVFPEHK+EIVKRLQAR HI GMTGDGVNDAP
Sbjct: 540 SSLLGENKDEAVSALPIDDLIEKADGFAGVFPEHKYEIVKRLQARNHICGMTGDGVNDAP 599
Query: 599 ALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 658
ALK ADIGIAVADSTDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI
Sbjct: 600 ALKKADIGIAVADSTDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 659
Query: 659 RIVLGFLLLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGV 718
RIVLGF+LLT WEFDFPPFMVL+IAILNDGTIMTISKDRVKPSP PDSWKL EIF TGV
Sbjct: 660 RIVLGFMLLTCFWEFDFPPFMVLVIAILNDGTIMTISKDRVKPSPLPDSWKLTEIFTTGV 719
Query: 719 VIGSYLALTTVIFFWAIFETDFFQNHFHV----QSLRNSGGKKIPKVLNGQLASAVYLQV 774
V+G+YLAL TV FF+ +ET+FF F V Q N + I L QLASAVYLQV
Sbjct: 720 VLGAYLALMTVFFFYVTYETNFFTKRFDVPDFNQHHFNMTNETIAIELKEQLASAVYLQV 779
Query: 775 STISQALIFVTRSRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTS 834
STISQALIFVTRSR WSFTERPGLLLVTAFIIAQL+AT+ISA AT FAGI KIGW WT+
Sbjct: 780 STISQALIFVTRSRNWSFTERPGLLLVTAFIIAQLIATVISATATWKFAGIRKIGWGWTA 839
Query: 835 IIWLYNIIIYMLLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRT 894
IIW+YNI+ Y+LLDPIK AV YALSGRAW LV N+RTA T QKDFG+EAREA WA+EQRT
Sbjct: 840 IIWVYNILTYLLLDPIKFAVRYALSGRAWGLVVNQRTAFTNQKDFGKEAREAKWAAEQRT 899
Query: 895 LHGLQSMDAK---IDKHAFKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVD 951
LHGLQS + + F+DIN+MAEEARRRAEI+RLREL TLKG+VESFAKLRGLD+D
Sbjct: 900 LHGLQSAEMASMFSQRGTFRDINLMAEEARRRAEISRLRELRTLKGRVESFAKLRGLDID 959
Query: 952 -HVNPHYTV 959
++NPHYTV
Sbjct: 960 SNINPHYTV 968
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520780|ref|XP_003529038.1| PREDICTED: plasma membrane ATPase 1-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1582 bits (4095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 788/961 (81%), Positives = 865/961 (90%), Gaps = 3/961 (0%)
Query: 1 MDKTAIALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKEN 60
M + ++ LEAI KEAVDLENIP+EEVF+NLKCT +GLSS++VQ RL++FG+NKLEEKKE+
Sbjct: 1 MGEGSVELEAIVKEAVDLENIPLEEVFDNLKCTREGLSSEQVQQRLDLFGYNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENN 120
KILKFLGFMWNPLSWVMEAAALMAI +A GGG+ DY DFVGI+ LL+INSTISFIEENN
Sbjct: 61 KILKFLGFMWNPLSWVMEAAALMAIGMAHGGGEGGDYQDFVGIVLLLLINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHF 240
DQSALTGESLPV+K+PGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVE+TTHVGHF
Sbjct: 181 DQSALTGESLPVSKHPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHVGHF 240
Query: 241 QQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVT 300
Q+VLTSIGNFCICSIA+GMI EII+IYG ++ YR G+DNLLV+LIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTSIGNFCICSIAVGMIFEIIVIYGIHKKKYRNGVDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDK 360
MAIGSH+L+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK +IEV F GVD
Sbjct: 301 MAIGSHKLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNIIEV-FAKGVDN 359
Query: 361 DMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKN 420
DMV+L AARASRLENQDAID AIVSMLADPKEARA I EVHFLPFNPTDKRTALTY D
Sbjct: 360 DMVVLMAARASRLENQDAIDCAIVSMLADPKEARAGIKEVHFLPFNPTDKRTALTYLDAA 419
Query: 421 GKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGG 480
GKMHR SKGAPEQILNLA NK++I+++VH++IDKFAERGLRSL VARQEVP GTKDSPGG
Sbjct: 420 GKMHRVSKGAPEQILNLAHNKSEIQQRVHAIIDKFAERGLRSLAVARQEVPEGTKDSPGG 479
Query: 481 PWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWEF+GLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 480 PWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSS 539
Query: 541 ALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPAL 600
+LLGE KD + + VDDLIE ADGFAGVFPEHK+EIVKRLQARKHI GMTGDGVNDAPAL
Sbjct: 540 SLLGENKDGLGAVTVDDLIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 599
Query: 601 KVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
K+ADIGIAVAD+TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA+SITIRI
Sbjct: 600 KIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAISITIRI 659
Query: 661 VLGFLLLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVI 720
VLGF+LL S W+FDFPPFMVL+IAILNDGTIMTISKDRVKPSP PDSWKL EIF TG+V+
Sbjct: 660 VLGFMLLNSFWKFDFPPFMVLVIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFTTGIVL 719
Query: 721 GSYLALTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQA 780
GSYLAL TVIFF+ + ET+FF +HF V+ + I L SAVYLQVSTISQA
Sbjct: 720 GSYLALMTVIFFYIVVETNFFPDHFGVKHFSYNPDADIKDPTKRMLGSAVYLQVSTISQA 779
Query: 781 LIFVTRSRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYN 840
LIFVTRSRGWS+TERPGLLLVTAFIIAQ +AT++SA T AGI IGW WT +IWLYN
Sbjct: 780 LIFVTRSRGWSYTERPGLLLVTAFIIAQAIATVVSATVTWQLAGIKSIGWGWTGVIWLYN 839
Query: 841 IIIYMLLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQS 900
I Y+ LDP+K AV YALSGRAW+ V N+RTA + DFG+EAREAAWA+EQRTLHGLQS
Sbjct: 840 TITYLFLDPLKFAVRYALSGRAWNTVINQRTAFINKNDFGKEAREAAWATEQRTLHGLQS 899
Query: 901 MDAK--IDKHAFKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVDHVNPHYT 958
++K DKH F++IN +AEEARRRAEI RLRELHTLKG+VESFAKLRGLD+D +N HYT
Sbjct: 900 AESKGFTDKHTFREINTLAEEARRRAEIARLRELHTLKGRVESFAKLRGLDIDAMNGHYT 959
Query: 959 V 959
V
Sbjct: 960 V 960
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520782|ref|XP_003529039.1| PREDICTED: plasma membrane ATPase 1-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1580 bits (4091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 788/967 (81%), Positives = 864/967 (89%), Gaps = 9/967 (0%)
Query: 1 MDKTAIALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKEN 60
M + ++ LEAI KEAVDLENIP+EEVF+NLKCT +GLSS++VQ RL++FG+NKLEEKKE+
Sbjct: 1 MGEGSVELEAIVKEAVDLENIPLEEVFDNLKCTREGLSSEQVQQRLDLFGYNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAALMAITLARGGG------KDVDYHDFVGILALLIINSTIS 114
KILKFLGFMWNPLSWVMEAAALMAI +A GG K DY DFVGI+ LL+INSTIS
Sbjct: 61 KILKFLGFMWNPLSWVMEAAALMAIGMAHGGVNLHHSLKRGDYQDFVGIVLLLLINSTIS 120
Query: 115 FIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLE 174
FIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLE
Sbjct: 121 FIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLE 180
Query: 175 GDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST 234
GDPLKIDQSALTGESLPV+K+PGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVE+T
Sbjct: 181 GDPLKIDQSALTGESLPVSKHPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENT 240
Query: 235 THVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMP 294
THVGHFQ+VLTSIGNFCICSIA+GMI EII+IYG ++ YR G+DNLLV+LIGGIPIAMP
Sbjct: 241 THVGHFQKVLTSIGNFCICSIAVGMIFEIIVIYGIHKKKYRNGVDNLLVLLIGGIPIAMP 300
Query: 295 TVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVF 354
TVLSVTMAIGSH+L+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK +IEV F
Sbjct: 301 TVLSVTMAIGSHKLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNIIEV-F 359
Query: 355 GNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTAL 414
GVD DMV+L AARASRLENQDAID AIVSMLADPKEARA I EVHFLPFNPTDKRTAL
Sbjct: 360 AKGVDNDMVVLMAARASRLENQDAIDCAIVSMLADPKEARAGIKEVHFLPFNPTDKRTAL 419
Query: 415 TYTDKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGT 474
TY D GKMHR SKGAPEQILNLA NK++I+++VH++IDKFAERGLRSL VARQEVP GT
Sbjct: 420 TYLDAAGKMHRVSKGAPEQILNLAHNKSEIQQRVHAIIDKFAERGLRSLAVARQEVPEGT 479
Query: 475 KDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGT 534
KDSPGGPWEF+GLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGT
Sbjct: 480 KDSPGGPWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGT 539
Query: 535 NMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGV 594
NMYPSS+LLGE KD + + VDDLIE ADGFAGVFPEHK+EIVKRLQARKHI GMTGDGV
Sbjct: 540 NMYPSSSLLGENKDGLGAVTVDDLIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGV 599
Query: 595 NDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654
NDAPALK+ADIGIAVAD+TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA+
Sbjct: 600 NDAPALKIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAI 659
Query: 655 SITIRIVLGFLLLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIF 714
SITIRIVLGF+LL S W+FDFPPFMVL+IAILNDGTIMTISKDRVKPSP PDSWKL EIF
Sbjct: 660 SITIRIVLGFMLLNSFWKFDFPPFMVLVIAILNDGTIMTISKDRVKPSPLPDSWKLSEIF 719
Query: 715 ATGVVIGSYLALTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQV 774
TG+V+GSYLAL TVIFF+ + ET+FF +HF V+ + I L SAVYLQV
Sbjct: 720 TTGIVLGSYLALMTVIFFYIVVETNFFPDHFGVKHFSYNPDADIKDPTKRMLGSAVYLQV 779
Query: 775 STISQALIFVTRSRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTS 834
STISQALIFVTRSRGWS+TERPGLLLVTAFIIAQ +AT++SA T AGI IGW WT
Sbjct: 780 STISQALIFVTRSRGWSYTERPGLLLVTAFIIAQAIATVVSATVTWQLAGIKSIGWGWTG 839
Query: 835 IIWLYNIIIYMLLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRT 894
+IWLYN I Y+ LDP+K AV YALSGRAW+ V N+RTA + DFG+EAREAAWA+EQRT
Sbjct: 840 VIWLYNTITYLFLDPLKFAVRYALSGRAWNTVINQRTAFINKNDFGKEAREAAWATEQRT 899
Query: 895 LHGLQSMDAK--IDKHAFKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVDH 952
LHGLQS ++K DKH F++IN +AEEARRRAEI RLRELHTLKG+VESFAKLRGLD+D
Sbjct: 900 LHGLQSAESKGFTDKHTFREINTLAEEARRRAEIARLRELHTLKGRVESFAKLRGLDIDA 959
Query: 953 VNPHYTV 959
+N HYTV
Sbjct: 960 MNGHYTV 966
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|5669157|gb|AAD46187.1| plasma membrane proton ATPase [Nicotiana plumbaginifolia] | Back alignment and taxonomy information |
|---|
Score = 1566 bits (4054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 790/964 (81%), Positives = 866/964 (89%), Gaps = 7/964 (0%)
Query: 2 DKTAIALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKENK 61
+ T LEAI+ E VDLENIPI+EVFENLKCT +GL+S EV+ RL VFGHNKLEEKKE+K
Sbjct: 4 ENTTTTLEAINNETVDLENIPIKEVFENLKCTEEGLNSTEVEKRLNVFGHNKLEEKKESK 63
Query: 62 ILKFLGFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENNA 121
ILKFLGFMWNPLSWVME AA+MA+ L G K++DY DFVGI+ALLIINSTISFIEENNA
Sbjct: 64 ILKFLGFMWNPLSWVMEVAAIMALFLPHGKHKEIDYQDFVGIVALLIINSTISFIEENNA 123
Query: 122 GNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKID 181
GNAAAALMARLAPKAKVLRDGKWSEEDA+VLVPGDIISIKLGDIIPADARLL GDPLKID
Sbjct: 124 GNAAAALMARLAPKAKVLRDGKWSEEDAAVLVPGDIISIKLGDIIPADARLLNGDPLKID 183
Query: 182 QSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQ 241
QSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVE+TTHVGHFQ
Sbjct: 184 QSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHVGHFQ 243
Query: 242 QVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTM 301
+VL SIGNFCICSIAIGM+IE+I+I+G Q R R ID+LLV+LIGGIPIAMPTVLSVTM
Sbjct: 244 KVLASIGNFCICSIAIGMVIELIVIFGGQHRPPREAIDSLLVLLIGGIPIAMPTVLSVTM 303
Query: 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKD 361
AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK LIE VF V+KD
Sbjct: 304 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIE-VFAKDVEKD 362
Query: 362 MVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNG 421
V+L AARASRLENQDAID AIVSMLADPKEARA ITE+HFLPFNPTDKRTALTY D G
Sbjct: 363 TVVLMAARASRLENQDAIDTAIVSMLADPKEARAGITEIHFLPFNPTDKRTALTYVDSAG 422
Query: 422 KMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGP 481
KMHR SKGAPEQILNLAWNK+DI+ +VH+VI+KFAERGLRSL VARQEVPAGTKDSPGGP
Sbjct: 423 KMHRVSKGAPEQILNLAWNKSDIQNRVHTVIEKFAERGLRSLAVARQEVPAGTKDSPGGP 482
Query: 482 WEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSA 541
WEF+GLLPLFDPPRHDSAETIRRAL+LGVSVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 483 WEFVGLLPLFDPPRHDSAETIRRALELGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSF 542
Query: 542 LLGEKKDTIVG-LPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPAL 600
LLGE+KD LP+++LIE ADGFAGVFPEHK+EIV+ LQ+RKHI GMTGDGVNDAPAL
Sbjct: 543 LLGEQKDASAAVLPIEELIESADGFAGVFPEHKYEIVRILQSRKHICGMTGDGVNDAPAL 602
Query: 601 KVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
K ADIGIAVADSTDAAR ASDIVLTEPGLSVII AVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 603 KKADIGIAVADSTDAARGASDIVLTEPGLSVIIHAVLTSRAIFQRMKNYTIYAVSITIRI 662
Query: 661 VLGFLLLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVI 720
VLGF+LLT+ W F+FPPFMVL+IAILNDGTIMTISKDRVKPSP PDSWKL EIFATG+VI
Sbjct: 663 VLGFMLLTAFWRFNFPPFMVLVIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGIVI 722
Query: 721 GSYLALTTVIFFWAIFETDFFQNHFHVQSL--RNSGGKKIPKVLNGQLASAVYLQVSTIS 778
GSYLAL T +FF+ +FET FF + F+V+ R K I LN +LASAVYLQVSTIS
Sbjct: 723 GSYLALMTALFFYLMFETSFFAHAFNVEDFNKRIPANKVITDSLNAKLASAVYLQVSTIS 782
Query: 779 QALIFVTRSRGWSFTERPGLLLVTAFIIAQLVATLISALATS-DFAGIHKIGWRWTSIIW 837
QALIFVTRSRGWSF ERPGLLLV AFI+AQ+VAT +SA+ TS FAGI KIGW+WT +IW
Sbjct: 783 QALIFVTRSRGWSFMERPGLLLVAAFIVAQMVATFMSAMVTSVKFAGIEKIGWKWTGVIW 842
Query: 838 LYNIIIYMLLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHG 897
L+NI+ Y LLDPIK AV YALSGRAW L+ N++TA T +KDFG+EAREAAWA+EQRT+HG
Sbjct: 843 LFNIVTYFLLDPIKFAVRYALSGRAWGLLLNQKTAFTNRKDFGKEAREAAWAAEQRTIHG 902
Query: 898 LQSMDAKI--DKHAFKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVDHVNP 955
LQS++ + + + F+DI++MAEEA+RRAEI RLRELHTLKG+VESFAKLRGLDVDHVNP
Sbjct: 903 LQSVETRTFPENYTFRDISLMAEEAKRRAEIARLRELHTLKGRVESFAKLRGLDVDHVNP 962
Query: 956 HYTV 959
HYTV
Sbjct: 963 HYTV 966
|
Source: Nicotiana plumbaginifolia Species: Nicotiana plumbaginifolia Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356504579|ref|XP_003521073.1| PREDICTED: plasma membrane ATPase 1-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1563 bits (4047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 787/961 (81%), Positives = 865/961 (90%), Gaps = 3/961 (0%)
Query: 1 MDKTAIALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKEN 60
M + ++ LEAI KEAVDLENIPIEEVF+NLKCT +GLSS++VQ RL++FG+NKLEEKKE+
Sbjct: 1 MGEGSVELEAIVKEAVDLENIPIEEVFDNLKCTKEGLSSEQVQQRLDLFGYNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENN 120
KILKFLGFMWNPLSWVMEAAA+MAI +A GGG+ DY DF GI+ LL+INSTISFIEENN
Sbjct: 61 KILKFLGFMWNPLSWVMEAAAIMAIGMAHGGGEGGDYQDFAGIVLLLLINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHF 240
DQSALTGESLPV+K+PG+GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVE+TTHVGHF
Sbjct: 181 DQSALTGESLPVSKHPGEGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHVGHF 240
Query: 241 QQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVT 300
Q+VLTSIGNFCICSIA+GMI+EII+IYG ++ YR GIDNLLV+LIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTSIGNFCICSIAVGMILEIIVIYGIHKKKYRNGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDK 360
MAIGSH+L+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK +IEV F GVD
Sbjct: 301 MAIGSHKLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNIIEV-FAKGVDS 359
Query: 361 DMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKN 420
DMV+L AARASRLENQDAID AIVSMLADPKEAR I EVHFLPFNPTDKRTALTY D
Sbjct: 360 DMVVLMAARASRLENQDAIDCAIVSMLADPKEARTGIKEVHFLPFNPTDKRTALTYLDAA 419
Query: 421 GKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGG 480
GKMHR SKGAPEQILNLA NK +I+++VH++IDKFAERGLRSL VARQEVP GTKDSPGG
Sbjct: 420 GKMHRVSKGAPEQILNLAHNKPEIQQRVHAIIDKFAERGLRSLAVARQEVPEGTKDSPGG 479
Query: 481 PWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWEF+GLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 480 PWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSS 539
Query: 541 ALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPAL 600
+LLGE KD + + VDDLIE ADGFAGVFPEHK+EIVKRLQARKHI GMTGDGVNDAPAL
Sbjct: 540 SLLGENKDGLGAVAVDDLIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 599
Query: 601 KVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
K+ADIGIAVAD+TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA+SITIRI
Sbjct: 600 KIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAISITIRI 659
Query: 661 VLGFLLLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVI 720
VLGF+LL S W+FDFPPFMVL+IAILNDGTIMTISKDRVKPSP PDSWKL EIF TG+V+
Sbjct: 660 VLGFMLLNSFWKFDFPPFMVLVIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFTTGIVL 719
Query: 721 GSYLALTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQA 780
GSYLAL TVIFF+ + ET+FF +HF V+ + I L SAVYLQVSTISQA
Sbjct: 720 GSYLALMTVIFFYIVVETNFFPDHFGVKHFHYNPDASIKDPTKRMLGSAVYLQVSTISQA 779
Query: 781 LIFVTRSRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYN 840
LIFVTRSRGWS+TERPGLLLVTAFIIAQ +AT++SA + AGI IGW WT +IWLYN
Sbjct: 780 LIFVTRSRGWSYTERPGLLLVTAFIIAQAIATVVSATLSWRLAGIKSIGWGWTGVIWLYN 839
Query: 841 IIIYMLLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQS 900
II Y+ LDP+K AV YALSGRAW+ V N+RTA T + DFG+EAREAAWA+EQRTLHGLQS
Sbjct: 840 IITYLFLDPLKFAVRYALSGRAWNTVINQRTAFTNKNDFGKEAREAAWATEQRTLHGLQS 899
Query: 901 MDAK--IDKHAFKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVDHVNPHYT 958
++K DKH F++IN +AEEARRRAEI RLRELHTLKG+VESFAKLRGLD+D +N HYT
Sbjct: 900 AESKGFTDKHTFREINTLAEEARRRAEIARLRELHTLKGRVESFAKLRGLDIDAMNGHYT 959
Query: 959 V 959
V
Sbjct: 960 V 960
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356504581|ref|XP_003521074.1| PREDICTED: plasma membrane ATPase 1-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1561 bits (4043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 786/966 (81%), Positives = 863/966 (89%), Gaps = 8/966 (0%)
Query: 1 MDKTAIALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKEN 60
M + ++ LEAI KEAVDLENIPIEEVF+NLKCT +GLSS++VQ RL++FG+NKLEEKKE+
Sbjct: 1 MGEGSVELEAIVKEAVDLENIPIEEVFDNLKCTKEGLSSEQVQQRLDLFGYNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAALMAITLARGG-----GKDVDYHDFVGILALLIINSTISF 115
KILKFLGFMWNPLSWVMEAAA+MAI +A GG DY DF GI+ LL+INSTISF
Sbjct: 61 KILKFLGFMWNPLSWVMEAAAIMAIGMAHGGVNLHNSLSGDYQDFAGIVLLLLINSTISF 120
Query: 116 IEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEG 175
IEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEG
Sbjct: 121 IEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEG 180
Query: 176 DPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTT 235
DPLKIDQSALTGESLPV+K+PG+GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVE+TT
Sbjct: 181 DPLKIDQSALTGESLPVSKHPGEGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTT 240
Query: 236 HVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPT 295
HVGHFQ+VLTSIGNFCICSIA+GMI+EII+IYG ++ YR GIDNLLV+LIGGIPIAMPT
Sbjct: 241 HVGHFQKVLTSIGNFCICSIAVGMILEIIVIYGIHKKKYRNGIDNLLVLLIGGIPIAMPT 300
Query: 296 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFG 355
VLSVTMAIGSH+L+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK +IEV F
Sbjct: 301 VLSVTMAIGSHKLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNIIEV-FA 359
Query: 356 NGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALT 415
GVD DMV+L AARASRLENQDAID AIVSMLADPKEAR I EVHFLPFNPTDKRTALT
Sbjct: 360 KGVDSDMVVLMAARASRLENQDAIDCAIVSMLADPKEARTGIKEVHFLPFNPTDKRTALT 419
Query: 416 YTDKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTK 475
Y D GKMHR SKGAPEQILNLA NK +I+++VH++IDKFAERGLRSL VARQEVP GTK
Sbjct: 420 YLDAAGKMHRVSKGAPEQILNLAHNKPEIQQRVHAIIDKFAERGLRSLAVARQEVPEGTK 479
Query: 476 DSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTN 535
DSPGGPWEF+GLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTN
Sbjct: 480 DSPGGPWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTN 539
Query: 536 MYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVN 595
MYPSS+LLGE KD + + VDDLIE ADGFAGVFPEHK+EIVKRLQARKHI GMTGDGVN
Sbjct: 540 MYPSSSLLGENKDGLGAVAVDDLIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVN 599
Query: 596 DAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 655
DAPALK+ADIGIAVAD+TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA+S
Sbjct: 600 DAPALKIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAIS 659
Query: 656 ITIRIVLGFLLLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFA 715
ITIRIVLGF+LL S W+FDFPPFMVL+IAILNDGTIMTISKDRVKPSP PDSWKL EIF
Sbjct: 660 ITIRIVLGFMLLNSFWKFDFPPFMVLVIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFT 719
Query: 716 TGVVIGSYLALTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVS 775
TG+V+GSYLAL TVIFF+ + ET+FF +HF V+ + I L SAVYLQVS
Sbjct: 720 TGIVLGSYLALMTVIFFYIVVETNFFPDHFGVKHFHYNPDASIKDPTKRMLGSAVYLQVS 779
Query: 776 TISQALIFVTRSRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSI 835
TISQALIFVTRSRGWS+TERPGLLLVTAFIIAQ +AT++SA + AGI IGW WT +
Sbjct: 780 TISQALIFVTRSRGWSYTERPGLLLVTAFIIAQAIATVVSATLSWRLAGIKSIGWGWTGV 839
Query: 836 IWLYNIIIYMLLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTL 895
IWLYNII Y+ LDP+K AV YALSGRAW+ V N+RTA T + DFG+EAREAAWA+EQRTL
Sbjct: 840 IWLYNIITYLFLDPLKFAVRYALSGRAWNTVINQRTAFTNKNDFGKEAREAAWATEQRTL 899
Query: 896 HGLQSMDAK--IDKHAFKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVDHV 953
HGLQS ++K DKH F++IN +AEEARRRAEI RLRELHTLKG+VESFAKLRGLD+D +
Sbjct: 900 HGLQSAESKGFTDKHTFREINTLAEEARRRAEIARLRELHTLKGRVESFAKLRGLDIDAM 959
Query: 954 NPHYTV 959
N HYTV
Sbjct: 960 NGHYTV 965
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|7378771|emb|CAB85495.1| H+-ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1524 bits (3947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 781/967 (80%), Positives = 859/967 (88%), Gaps = 9/967 (0%)
Query: 1 MDKTAIALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKEN 60
M + ++L+A+ KEAVDLENIPI+EVF+NLKCT +GL+ +EVQ RLE+FG+NKLEEKKE+
Sbjct: 1 MVEGTMSLDAVIKEAVDLENIPIDEVFDNLKCTKEGLTCEEVQERLELFGYNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAALMAITLARGG------GKDVDYHDFVGILALLIINSTIS 114
KILKFLGFMWNPLSWVMEAAA+MAI +A GG K DY DFVGI+ LLIINSTIS
Sbjct: 61 KILKFLGFMWNPLSWVMEAAAIMAIAMAHGGRNMDGTKKQGDYQDFVGIIILLIINSTIS 120
Query: 115 FIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLE 174
FIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDI+SIKLGDIIPADARLLE
Sbjct: 121 FIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIVSIKLGDIIPADARLLE 180
Query: 175 GDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST 234
GDPLKIDQSALTGESLPVTK+PG+G+YSGSTCKQGEIEA+VIATGVHTFFGKAAHLVE+T
Sbjct: 181 GDPLKIDQSALTGESLPVTKHPGEGIYSGSTCKQGEIEAIVIATGVHTFFGKAAHLVENT 240
Query: 235 THVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMP 294
THVGHFQ+VLTSIGNFCICSIAIGM+IEII+IYG +GYR GIDNLLV+LIGGIPIAMP
Sbjct: 241 THVGHFQKVLTSIGNFCICSIAIGMVIEIIVIYGVHGKGYRNGIDNLLVLLIGGIPIAMP 300
Query: 295 TVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVF 354
TVLSVTMAIGSH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK +IEV F
Sbjct: 301 TVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKDMIEV-F 359
Query: 355 GNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTAL 414
GVDKD+V+L AARASRLENQDAID AIVSMLADPKEAR I EVHFLPFNPTDKRTAL
Sbjct: 360 AKGVDKDLVVLMAARASRLENQDAIDCAIVSMLADPKEARTGIKEVHFLPFNPTDKRTAL 419
Query: 415 TYTDKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGT 474
TY D G MHR SKGAPEQILNLA NKA+I +KVHS+IDKFAERGLRSLGVARQEVP G+
Sbjct: 420 TYIDAAGNMHRVSKGAPEQILNLARNKAEIAQKVHSMIDKFAERGLRSLGVARQEVPEGS 479
Query: 475 KDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGT 534
KDSPGGPWEF+ LLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGT
Sbjct: 480 KDSPGGPWEFVALLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGT 539
Query: 535 NMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGV 594
NMYPSS+LLG+ KD + + +DDLIE ADGFAGVFPEHK+EIVKRLQARKHI GMTGDGV
Sbjct: 540 NMYPSSSLLGDNKDQLGAVSIDDLIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGV 599
Query: 595 NDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654
NDAPALK+ADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV
Sbjct: 600 NDAPALKIADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 659
Query: 655 SITIRIVLGFLLLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIF 714
SITIRIVLGF+LL S W FD PPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIF
Sbjct: 660 SITIRIVLGFMLLNSFWSFDSPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIF 719
Query: 715 ATGVVIGSYLALTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQV 774
ATGV++G+YLA+ TVIFFW + ET+FF ++F V R + + +LASAVYLQV
Sbjct: 720 ATGVILGTYLAIMTVIFFWIVMETNFFPDNFGVHRFRPDLKAPVTSEMTEKLASAVYLQV 779
Query: 775 STISQALIFVTRSRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTS 834
STISQALIFVTRSRGWS+TERPGLLLV AF IAQLVAT+ISA AT AGI IGW W
Sbjct: 780 STISQALIFVTRSRGWSYTERPGLLLVFAFAIAQLVATVISAQATWKIAGIRGIGWGWAG 839
Query: 835 IIWLYNIIIYMLLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRT 894
+IWL+NI+ Y+ LDP+K V Y SGRAW+LV N+RTA T + DFG+EAREAAWA+EQRT
Sbjct: 840 VIWLFNIVTYVFLDPLKFVVAYQQSGRAWNLVVNQRTAFTNKNDFGKEAREAAWAAEQRT 899
Query: 895 LHGLQSMDAK--IDKHAFKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVDH 952
LHGL+S + K +KH ++IN MA+EA+RRA + RLRELHTLKG+VESFAKLRGLD+D
Sbjct: 900 LHGLRSAEIKGFAEKHNHREINTMADEAKRRAGLARLRELHTLKGRVESFAKLRGLDIDT 959
Query: 953 VNPHYTV 959
+N HYTV
Sbjct: 960 MNGHYTV 966
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 959 | ||||||
| TAIR|locus:2172244 | 956 | HA11 "H(+)-ATPase 11" [Arabido | 0.991 | 0.994 | 0.723 | 0.0 | |
| TAIR|locus:2097895 | 960 | HA4 "H(+)-ATPase 4" [Arabidops | 0.986 | 0.985 | 0.725 | 0.0 | |
| TAIR|locus:2081932 | 961 | HA7 "H(+)-ATPase 7" [Arabidops | 0.990 | 0.988 | 0.700 | 0.0 | |
| TAIR|locus:2044450 | 949 | HA1 "H(+)-ATPase 1" [Arabidops | 0.982 | 0.992 | 0.694 | 0.0 | |
| TAIR|locus:2096549 | 948 | HA8 "H(+)-ATPase 8" [Arabidops | 0.985 | 0.996 | 0.686 | 0.0 | |
| TAIR|locus:2053343 | 949 | HA6 "H(+)-ATPase 6" [Arabidops | 0.984 | 0.994 | 0.683 | 0.0 | |
| TAIR|locus:2165600 | 949 | HA3 "H(+)-ATPase 3" [Arabidops | 0.984 | 0.994 | 0.679 | 0.0 | |
| TAIR|locus:2025727 | 954 | HA9 "H(+)-ATPase 9" [Arabidops | 0.979 | 0.984 | 0.676 | 0.0 | |
| TAIR|locus:2046623 | 949 | HA5 "H(+)-ATPase 5" [Arabidops | 0.982 | 0.992 | 0.673 | 0.0 | |
| TAIR|locus:2020372 | 947 | AHA10 "autoinhibited H(+)-ATPa | 0.983 | 0.995 | 0.632 | 3.39999999879e-315 |
| TAIR|locus:2172244 HA11 "H(+)-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3502 (1237.8 bits), Expect = 0., P = 0.
Identities = 695/961 (72%), Positives = 771/961 (80%)
Query: 2 DKTAIALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHXXXXXXXXXX 61
DK + LEA+ KE VDLEN+PIEEVFE+L+C+ +GL+++ RL +FGH
Sbjct: 3 DKEEV-LEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKESK 61
Query: 62 XXXFLGFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEEXXX 121
FLGFMWNPLSWVMEAAA+MAI LA GGGK D+ DFVGI+ LL+INSTISFIEE
Sbjct: 62 FLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNA 121
Query: 122 XXXXXXXXXXXXXXXKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKID 181
KVLRDG+W E+DA++LVPGDIISIKLGDI+PADARLLEGDPLKID
Sbjct: 122 GNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKID 181
Query: 182 QSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQ 241
QS+LTGESLPVTK PGDGVYSGSTCKQGE+EAVVIATGVHTFFGKAAHLV++T HVGHFQ
Sbjct: 182 QSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHFQ 241
Query: 242 QVLTSIGNFCXXXXXXXXXXXXXXXYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTM 301
QVLT+IGNFC Y Q R YR GIDNLLV+LIGGIPIAMPTVLSVTM
Sbjct: 242 QVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTM 301
Query: 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKD 361
AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK LIEV F GVD D
Sbjct: 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEV-FTKGVDAD 360
Query: 362 MVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNG 421
V+L AA+ASRLENQDAIDAAIV MLADPKEARA + EVHFLPFNPTDKRTALTY D +G
Sbjct: 361 TVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDG 420
Query: 422 KMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGP 481
KMHR SKGAPEQILNLA N+A+IE++VH+VIDKFAERGLRSL VA QEVP GTK+S GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGP 480
Query: 482 WEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSA 541
W+F+GL+PLFDPPRHDSAETIRRAL+LGV+VKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 542 LLGEKKDTIVG-LPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPAL 600
LLG+ KD +G LP+DDLIEKADGFAGVFPEHK+EIVKRLQARKHI GMTGDGVNDAPAL
Sbjct: 541 LLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KVADIGIXXXXXXXXXXXXXXIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
K ADIGI IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFLLLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVI 720
VLGF+LL IW+FDFPPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVV
Sbjct: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVF 720
Query: 721 GSYLALTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQA 780
GSY+A+ TVIFFWA ++TDFF F V +L + K LASA+YLQVS ISQA
Sbjct: 721 GSYMAMMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRK-----LASAIYLQVSIISQA 775
Query: 781 LIFVTRSRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYN 840
LIFVTRSR WS+ ERPG+LLV AFI+AQLVATLI+ A FA I IGW W +IWLYN
Sbjct: 776 LIFVTRSRSWSYVERPGMLLVVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYN 835
Query: 841 IIIYMLLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQS 900
I+ Y+ LD IK + YALSGRAW LV +R A T QKDFG+E RE WA QRTLHGLQ+
Sbjct: 836 IVFYIPLDIIKFLIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQA 895
Query: 901 MDAKI--DKHAFKDINIMXXXXXXXXXITRLRELHTLKGKVESFAKLRGLDVDHVNPHYT 958
DAK+ ++ F +++ M I RLRELHTLKG VES +L+GLD++ + YT
Sbjct: 896 PDAKMFPERTHFNELSQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYT 955
Query: 959 V 959
V
Sbjct: 956 V 956
|
|
| TAIR|locus:2097895 HA4 "H(+)-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3473 (1227.6 bits), Expect = 0., P = 0.
Identities = 693/955 (72%), Positives = 760/955 (79%)
Query: 8 LEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHXXXXXXXXXXXXXFLG 67
LEA+ KEAVDLEN+PIEEVFENL+C+ +GL++ RL +FGH FLG
Sbjct: 12 LEAVLKEAVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKESKFLKFLG 71
Query: 68 FMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEEXXXXXXXXX 127
FMWNPLSWVMEAAA+MAI LA GGGK D+ DFVGI+ LL+INSTISFIEE
Sbjct: 72 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 131
Query: 128 XXXXXXXXXKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
KVLRDG+W E+DA++LVPGDIISIKLGDI+PADARLLEGDPLKIDQSALTG
Sbjct: 132 LMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTG 191
Query: 188 ESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVLTSI 247
ESLPVTK+ GDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV++T +GHFQQVLT+I
Sbjct: 192 ESLPVTKSSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQIGHFQQVLTAI 251
Query: 248 GNFCXXXXXXXXXXXXXXXYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHR 307
GNFC Y Q R YR GIDNLLV+LIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 252 GNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 311
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTA 367
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK LIEV F GVD D V+L A
Sbjct: 312 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEV-FMKGVDADTVVLMA 370
Query: 368 ARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRAS 427
ARASRLENQDAIDAAIV MLADPK+ARA I EVHFLPFNPTDKRTALTY D G HR S
Sbjct: 371 ARASRLENQDAIDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVS 430
Query: 428 KGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGL 487
KGAPEQILNLA NK++IE++VH+VIDKFAERGLRSL VA Q+VP G KDS GGPW+F+GL
Sbjct: 431 KGAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGL 490
Query: 488 LPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKK 547
+PLFDPPRHDSAETIRRAL+LGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG+ K
Sbjct: 491 MPLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNK 550
Query: 548 D-TIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG 606
D +IV LPVD+LIEKADGFAGVFPEHK+EIVKRLQARKHI GMTGDGVNDAPALK ADIG
Sbjct: 551 DESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 610
Query: 607 IXXXXXXXXXXXXXXIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL 666
I IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+L
Sbjct: 611 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 670
Query: 667 LTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGSYLAL 726
L IW+FDFPPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVV GSY+A+
Sbjct: 671 LALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFGSYMAM 730
Query: 727 TTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIFVTR 786
TVIFFW ++TDFF F V +L + K LASA+YLQVS ISQALIFVTR
Sbjct: 731 MTVIFFWVSYKTDFFPRTFGVATLEKTAHDDFRK-----LASAIYLQVSIISQALIFVTR 785
Query: 787 SRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYNIIIYML 846
SR WSF ERPG+ L+ AFI+AQLVATLI+ A FA I IGW W +IWLYNII Y+
Sbjct: 786 SRSWSFVERPGIFLMIAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIP 845
Query: 847 LDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQSMDAKI- 905
LD IK + YALSGRAW LV +R A T QKDFG+E RE WA QRTLHGLQ+ D K+
Sbjct: 846 LDFIKFFIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTKMF 905
Query: 906 -DKHAFKDINIMXXXXXXXXXITRLRELHTLKGKVESFAKLRGLDVDHVNPHYTV 959
D+ ++N M I RLRELHTLKG VES +L+GLD++ + YTV
Sbjct: 906 TDRTHVSELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 960
|
|
| TAIR|locus:2081932 HA7 "H(+)-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3419 (1208.6 bits), Expect = 0., P = 0.
Identities = 672/959 (70%), Positives = 773/959 (80%)
Query: 7 ALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHXXXXXXXXXXXXXFL 66
AL+AI+ E++DLEN+P+EEVF++LKCT +GL+S+EVQ RL +FG+ FL
Sbjct: 6 ALKAITTESIDLENVPVEEVFQHLKCTKEGLTSNEVQERLTLFGYNKLEEKKESKILKFL 65
Query: 67 GFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEEXXXXXXXX 126
GFMWNPLSWVMEAAALMAI LA GGGK DYHDFVGI+ LL+INSTISF+EE
Sbjct: 66 GFMWNPLSWVMEAAALMAIGLAHGGGKPADYHDFVGIVVLLLINSTISFVEENNAGNAAA 125
Query: 127 XXXXXXXXXXKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALT 186
K +RDGKW+E DA+ LVPGDI+SIKLGDIIPADARLLEGDPLKIDQ+ LT
Sbjct: 126 ALMAQLAPKAKAVRDGKWNEIDAAELVPGDIVSIKLGDIIPADARLLEGDPLKIDQATLT 185
Query: 187 GESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVLTS 246
GESLPVTKNPG VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV+STTHVGHFQ+VLT+
Sbjct: 186 GESLPVTKNPGASVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTTHVGHFQKVLTA 245
Query: 247 IGNFCXXXXXXXXXXXXXXXYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSH 306
IGNFC YG Q+RGYRVGIDNLLV+LIGGIPIAMPTVLSVTMAIG+H
Sbjct: 246 IGNFCICSIAVGMAIEIVVIYGLQKRGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGAH 305
Query: 307 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILT 366
RL+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK LIEV F G+D+DM +L
Sbjct: 306 RLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEV-FKRGIDRDMAVLM 364
Query: 367 AARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRA 426
AARA+RLENQDAID AIVSML+DPKEARA I E+HFLPF+P ++RTALTY D GKMHR
Sbjct: 365 AARAARLENQDAIDTAIVSMLSDPKEARAGIKELHFLPFSPANRRTALTYLDGEGKMHRV 424
Query: 427 SKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIG 486
SKGAPE+IL++A NK +I++KVH+ IDKFAERGLRSLG+A QEVP G GGPW+F+
Sbjct: 425 SKGAPEEILDMAHNKLEIKEKVHATIDKFAERGLRSLGLAYQEVPDGDVKGEGGPWDFVA 484
Query: 487 LLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEK 546
LLPLFDPPRHDSA+TI RAL LGVSVKMITGDQLAI KETGRRLGMGTNMYPSS+LL +
Sbjct: 485 LLPLFDPPRHDSAQTIERALHLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLSDN 544
Query: 547 KDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG 606
G+ VD+LIE ADGFAGVFPEHK+EIVKRLQ+RKHI GMTGDGVNDAPALK ADIG
Sbjct: 545 NTE--GVSVDELIENADGFAGVFPEHKYEIVKRLQSRKHICGMTGDGVNDAPALKKADIG 602
Query: 607 IXXXXXXXXXXXXXXIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL 666
I IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV+GF+L
Sbjct: 603 IAVDDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVMGFML 662
Query: 667 LTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGSYLAL 726
L WEFDFPPFMVL+IAILNDGTIMTISKDRVKPSP+PD WKL+EIFATGVV+G+YLA+
Sbjct: 663 LCVFWEFDFPPFMVLVIAILNDGTIMTISKDRVKPSPTPDCWKLKEIFATGVVLGAYLAI 722
Query: 727 TTVIFFWAIFETDFFQNHFHVQSLRNSG----GKKIPKVLNGQLASAVYLQVSTISQALI 782
TV+FFWA +ET+FF N FHV++ KK+ LN Q+ASAVYLQVSTISQALI
Sbjct: 723 MTVVFFWAAYETNFFHNIFHVRNFNQHHFKMKDKKVAAHLNEQMASAVYLQVSTISQALI 782
Query: 783 FVTRSRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYNII 842
FVTRSR WSF ERPG LLV AF+IAQLVA++ISA+A FAGI IGW WT +IW++NI+
Sbjct: 783 FVTRSRSWSFVERPGFLLVIAFLIAQLVASVISAMANWPFAGIRSIGWGWTGVIWIFNIV 842
Query: 843 IYMLLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQSMD 902
YMLLDPIK V YALSG++W + RTALT +K+FG+E R AAWA+E+RT HGL++
Sbjct: 843 TYMLLDPIKFLVRYALSGKSWDRMVEGRTALTGKKNFGQEERMAAWATEKRTQHGLETGQ 902
Query: 903 AKI-DKHAFKDINIMXXXXXXXXXITRLRELHTLKGKVESFAKLRGLDVDHVNPH-YTV 959
+ ++++ ++N M I R+REL TLKGKVES AKL+G D++ N + YT+
Sbjct: 903 KPVYERNSATELNNMAEEAKRRAEIARMRELQTLKGKVESAAKLKGYDLEDPNSNNYTI 961
|
|
| TAIR|locus:2044450 HA1 "H(+)-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3313 (1171.3 bits), Expect = 0., P = 0.
Identities = 664/956 (69%), Positives = 750/956 (78%)
Query: 8 LEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHXXXXXXXXXXXXXFLG 67
LE I E VDLE IPIEEVF+ LKCT +GL++ E + R+ +FG FLG
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 63
Query: 68 FMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEEXXXXXXXXX 127
FMWNPLSWVMEAAALMAI LA G + D+ DFVGI+ LL+INSTISFIEE
Sbjct: 64 FMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 128 XXXXXXXXXKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
KVLRDGKWSE++A++LVPGDI+SIKLGDIIPADARLLEGDPLK+DQSALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 188 ESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVLTSI 247
ESLPVTK+PG V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLV+ST VGHFQ+VLTSI
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSI 243
Query: 248 GNFCXXXXXXXXXXXXXXXYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHR 307
GNFC Y Q R YR GIDNLLV+LIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTA 367
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK L+EV F GV+KD V+L A
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEV-FCKGVEKDQVLLFA 362
Query: 368 ARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRAS 427
A ASR+ENQDAIDAA+V MLADPKEARA I EVHFLPFNP DKRTALTY D +G HR S
Sbjct: 363 AMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVS 422
Query: 428 KGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGL 487
KGAPEQIL+LA + D+ KKV S IDK+AERGLRSL VARQ VP TK+SPGGPWEF+GL
Sbjct: 423 KGAPEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGL 482
Query: 488 LPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKK 547
LPLFDPPRHDSAETIRRAL+LGV+VKMITGDQLAIGKETGRRLGMGTNMYPS+ALLG K
Sbjct: 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDK 542
Query: 548 DT-IVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG 606
D+ I +PV++LIEKADGFAGVFPEHK+EIVK+LQ RKHIVGMTGDGVNDAPALK ADIG
Sbjct: 543 DSNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIG 602
Query: 607 IXXXXXXXXXXXXXXIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL 666
I IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GF+L
Sbjct: 603 IAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFML 662
Query: 667 LTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGSYLAL 726
+ IWEFDF FMVLIIAILNDGTIMTISKDRVKPSP+PDSWKL+EIFATG+V+G Y A+
Sbjct: 663 IALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGGYQAI 722
Query: 727 TTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIFVTR 786
+VIFFWA +TDFF + F V+S+R++ N +L AVYLQVS ISQALIFVTR
Sbjct: 723 MSVIFFWAAHKTDFFSDKFGVRSIRDN---------NDELMGAVYLQVSIISQALIFVTR 773
Query: 787 SRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYNIIIYML 846
SR WSF ERPG LL+ AF+IAQLVATLI+ A FA + IGW W +IW+Y+I+ Y
Sbjct: 774 SRSWSFVERPGALLMIAFVIAQLVATLIAVYADWTFAKVKGIGWGWAGVIWIYSIVTYFP 833
Query: 847 LDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQSM-DAKI 905
D +K A+ Y LSG+AW+ +++ RTA T +KD+G REA WA QRTLHGLQ D I
Sbjct: 834 QDILKFAIRYILSGKAWASLFDNRTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKEDVNI 893
Query: 906 --DKHAFKDINIMXXXXXXXXXITRLRELHTLKGKVESFAKLRGLDVDHVNPHYTV 959
+K ++++++ + I RLRELHTLKG VES AKL+GLD+D HYTV
Sbjct: 894 FPEKGSYRELSEIAEQAKRRAEIARLRELHTLKGHVESVAKLKGLDIDTAGHHYTV 949
|
|
| TAIR|locus:2096549 HA8 "H(+)-ATPase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3295 (1165.0 bits), Expect = 0., P = 0.
Identities = 657/957 (68%), Positives = 749/957 (78%)
Query: 4 TAIALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHXXXXXXXXXXXX 63
T + + I KE VDLE IP+EEVFE LKC+ +GLSSDE RLE+FG
Sbjct: 3 TEFSWDEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFL 62
Query: 64 XFLGFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEEXXXXX 123
FLGFMWNPLSWVME+AA+MAI LA GGGK D+ DF+GI+ LLIINSTISFIEE
Sbjct: 63 KFLGFMWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGN 122
Query: 124 XXXXXXXXXXXXXKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQS 183
KVLRDGKW E++AS+LVPGD+ISIKLGDI+PADARLLEGDPLKIDQS
Sbjct: 123 AAAALMANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQS 182
Query: 184 ALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQV 243
ALTGESLP TK+PGD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLV+ST +VGHFQ+V
Sbjct: 183 ALTGESLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKV 242
Query: 244 LTSIGNFCXXXXXXXXXXXXXXXYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAI 303
LTSIGNFC Y Q R YR GIDNLLV+LIGGIPIAMPTVLSVTMAI
Sbjct: 243 LTSIGNFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 302
Query: 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMV 363
GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK LIEV F +D D V
Sbjct: 303 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEV-FPKNMDSDSV 361
Query: 364 ILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKM 423
+L AARASR+ENQDAIDA+IV ML DPKEARA ITEVHFLPFNP DKRTA+TY D++G
Sbjct: 362 VLMAARASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDW 421
Query: 424 HRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWE 483
HR+SKGAPEQI+ L + + ++K H VID FAERGLRSLGVA+Q VP TK+S G PWE
Sbjct: 422 HRSSKGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWE 481
Query: 484 FIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 543
F+GLLPLFDPPRHDSAETIRRAL+LGV+VKMITGDQLAIG ETGRRLGMGTNMYPS++LL
Sbjct: 482 FVGLLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLL 541
Query: 544 GEKKD-TIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKV 602
G KD ++VG+P+D+LIEKADGFAGVFPEHK+EIVK+LQ RKHI GMTGDGVNDAPALK
Sbjct: 542 GNSKDESLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKK 601
Query: 603 ADIGIXXXXXXXXXXXXXXIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 662
ADIGI IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL
Sbjct: 602 ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 661
Query: 663 GFLLLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGS 722
GF+L+ IW FDF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVV+G+
Sbjct: 662 GFMLVALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGT 721
Query: 723 YLALTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALI 782
Y+ALTTV+FFW +TDFF F V+S++ G ++ +L +A+YLQVS ISQALI
Sbjct: 722 YMALTTVLFFWLAHDTDFFSKTFGVRSIQ--GNEE-------ELMAALYLQVSIISQALI 772
Query: 783 FVTRSRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYNII 842
FVTRSR WSF ERPG LL+ AF+IAQLVATLI+ A FA I GW W IW+Y+II
Sbjct: 773 FVTRSRSWSFVERPGFLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSII 832
Query: 843 IYMLLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQSMD 902
Y+ LD +K + YAL+G+AW + N++TA T +KD+G+ REA WA QRTLHGL +
Sbjct: 833 TYIPLDILKFIIRYALTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPE 892
Query: 903 AKIDKHAFKDINIMXXXXXXXXXITRLRELHTLKGKVESFAKLRGLDVDHVNPHYTV 959
A + + +++ + + RLRELHTLKG VES KL+GLD+D + HYTV
Sbjct: 893 AMFNDNK-NELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948
|
|
| TAIR|locus:2053343 HA6 "H(+)-ATPase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3294 (1164.6 bits), Expect = 0., P = 0.
Identities = 653/955 (68%), Positives = 751/955 (78%)
Query: 6 IALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHXXXXXXXXXXXXXF 65
I+ + I KE VDLE IP++EVF+ LKC+ +GLSS+E ++RL++FG F
Sbjct: 5 ISWDEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKF 64
Query: 66 LGFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEEXXXXXXX 125
LGFMWNPLSWVMEAAA+MAI LA GGG+ D+ DFVGI LLIINSTISFIEE
Sbjct: 65 LGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNAA 124
Query: 126 XXXXXXXXXXXKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSAL 185
KVLRDG+W E++A++LVPGD+ISIKLGDI+PADARLLEGDPLKIDQSAL
Sbjct: 125 AALMANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSAL 184
Query: 186 TGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVLT 245
TGESLP TK+ GD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLV+ST +VGHFQ+VLT
Sbjct: 185 TGESLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLT 244
Query: 246 SIGNFCXXXXXXXXXXXXXXXYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGS 305
+IGNFC Y Q R YR GIDNLLV+LIGGIPIAMPTVLSVTMAIGS
Sbjct: 245 AIGNFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 304
Query: 306 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVIL 365
HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK LIEV F VDKD VIL
Sbjct: 305 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEV-FSKDVDKDYVIL 363
Query: 366 TAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHR 425
+ARASR+ENQDAID +IV+ML DPKEARA ITEVHFLPFNP +KRTA+TY D NG+ HR
Sbjct: 364 LSARASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHR 423
Query: 426 ASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFI 485
SKGAPEQI+ L K + +++ H +IDKFAERGLRSLGVARQ VP K+S G PWEF+
Sbjct: 424 CSKGAPEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFV 483
Query: 486 GLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGE 545
GLLPLFDPPRHDSAETIRRALDLGV+VKMITGDQLAIGKETGRRLGMGTNMYPSS+LL
Sbjct: 484 GLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLEN 543
Query: 546 KKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADI 605
K DT G+PVD+LIEKADGFAGVFPEHK+EIV++LQ RKHIVGMTGDGVNDAPALK ADI
Sbjct: 544 KDDTTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADI 603
Query: 606 GIXXXXXXXXXXXXXXIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFL 665
GI IVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+
Sbjct: 604 GIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 663
Query: 666 LLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGSYLA 725
L+ IWEFDF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFATGVV+G+Y+A
Sbjct: 664 LVALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATGVVLGTYMA 723
Query: 726 LTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIFVT 785
L TV+FFW +T FF + F V+SL+ GK + +L + +YLQVS ISQALIFVT
Sbjct: 724 LVTVVFFWLAHDTTFFSDKFGVRSLQ---GK------DEELIAVLYLQVSIISQALIFVT 774
Query: 786 RSRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYNIIIYM 845
RSR WSF ERPGLLL+ AF +AQL+ATLI+ A +FA I GW W +IW+Y+I+ Y+
Sbjct: 775 RSRSWSFVERPGLLLLIAFFVAQLIATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYI 834
Query: 846 LLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQSMDAKI 905
LD +K Y LSG+AW+ + RTA T +KD+GR REA WA QRTLHGL+ ++
Sbjct: 835 PLDILKFITRYTLSGKAWNNMIENRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPESMF 894
Query: 906 DKHA-FKDINIMXXXXXXXXXITRLRELHTLKGKVESFAKLRGLDVDHVNPHYTV 959
+ A + +++ + + RLRE+HTLKG VES KL+GLD+D++N HYTV
Sbjct: 895 EDTATYTELSEIAEQAKKRAEVARLREVHTLKGHVESVVKLKGLDIDNLNQHYTV 949
|
|
| TAIR|locus:2165600 HA3 "H(+)-ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3283 (1160.7 bits), Expect = 0., P = 0.
Identities = 652/959 (67%), Positives = 749/959 (78%)
Query: 5 AIALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHXXXXXXXXXXXXX 64
A LE I E VDLE IPIEEVF+ LKC+ +GLS E ++RL++FG
Sbjct: 2 ASGLEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLK 61
Query: 65 FLGFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEEXXXXXX 124
FLGFMWNPLSWVMEAAA+MAI LA GGGK D+ DFVGI+ LL+INSTISF+EE
Sbjct: 62 FLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNA 121
Query: 125 XXXXXXXXXXXXKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSA 184
KVLRDGKWSE++AS+LVPGDI+SIKLGDIIPADARLLEGDPLK+DQSA
Sbjct: 122 AAALMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSA 181
Query: 185 LTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVL 244
LTGESLP TK PG+ V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLV+ST VGHFQ+VL
Sbjct: 182 LTGESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 241
Query: 245 TSIGNFCXXXXXXXXXXXXXXXYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIG 304
T+IGNFC Y Q R YR GIDNLLV+LIGGIPIAMPTVLSVTMAIG
Sbjct: 242 TAIGNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 301
Query: 305 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVI 364
SH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK LIEV + GV+KD V+
Sbjct: 302 SHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEV-YCKGVEKDEVL 360
Query: 365 LTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMH 424
L AARASR+ENQDAIDAA+V MLADPKEARA I E+HFLPFNP DKRTALT+ D NG H
Sbjct: 361 LFAARASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWH 420
Query: 425 RASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEF 484
R SKGAPEQIL+L +AD+ K+VHS IDK+AERGLRSL V+RQ VP TK+S G PWEF
Sbjct: 421 RVSKGAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEF 480
Query: 485 IGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG 544
+G+LPLFDPPRHDSAETIRRALDLGV+VKMITGDQLAI KETGRRLGMG+NMYPSS+LLG
Sbjct: 481 VGVLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLG 540
Query: 545 EKKDTIVG-LPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVA 603
+ KD + +PV+DLIEKADGFAGVFPEHK+EIVK+LQ RKHI GMTGDGVNDAPALK A
Sbjct: 541 KHKDEAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKA 600
Query: 604 DIGIXXXXXXXXXXXXXXIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 663
DIGI IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV G
Sbjct: 601 DIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFG 660
Query: 664 FLLLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGSY 723
F+L+ IW+FDF PFMVLIIAILNDGTIMTISKDRVKPSP+PDSWKL+EIFATGVV+G Y
Sbjct: 661 FMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGY 720
Query: 724 LALTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIF 783
+A+ TV+FFWA ++TDFF FHV+ LR S ++ SA+YLQVS +SQALIF
Sbjct: 721 MAIMTVVFFWAAYKTDFFPRTFHVRDLRGS---------EHEMMSALYLQVSIVSQALIF 771
Query: 784 VTRSRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYNIII 843
VTRSR WSFTERPG L+ AF +AQL+AT I+ +FA I IGW W +IWLY+I+
Sbjct: 772 VTRSRSWSFTERPGYFLLIAFWVAQLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVF 831
Query: 844 YMLLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQSMD- 902
Y LD +K A+ Y L+G AW + + RTA T ++++G E REA WA QRTLHGLQ+ +
Sbjct: 832 YFPLDIMKFAIRYILAGTAWKNIIDNRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTET 891
Query: 903 AKI--DKHAFKDINIMXXXXXXXXXITRLRELHTLKGKVESFAKLRGLDVDHVNPHYTV 959
A + ++ +++++ + I RLRELHTLKG VES KL+GLD++ HYTV
Sbjct: 892 ANVVPERGGYRELSEIANQAKRRAEIARLRELHTLKGHVESVVKLKGLDIETAG-HYTV 949
|
|
| TAIR|locus:2025727 HA9 "H(+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3252 (1149.8 bits), Expect = 0., P = 0.
Identities = 645/953 (67%), Positives = 736/953 (77%)
Query: 11 ISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHXXXXXXXXXXXXXFLGFMW 70
I E +DLE IPIEEV L+CT +GL+SDE Q+RLE+FG FLGFMW
Sbjct: 12 IKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKENKVLKFLGFMW 71
Query: 71 NPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEEXXXXXXXXXXXX 130
NPLSWVME AA+MAI LA GGG+ D+ DFVGI LLIINSTISFIEE
Sbjct: 72 NPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEENNAGNAAAALMA 131
Query: 131 XXXXXXKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESL 190
KVLRDGKWSE++A++LVPGDIISIKLGDI+PAD RLL+GDPLKIDQSALTGESL
Sbjct: 132 GLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLKIDQSALTGESL 191
Query: 191 PVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVLTSIGNF 250
PVTK+PG VYSGSTCKQGE+EAVVIATGVHTFFGKAAHLV+ST GHFQ+VLT+IGNF
Sbjct: 192 PVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAIGNF 251
Query: 251 CXXXXXXXXXXXXXXXYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQ 310
C Y Q+R YR GIDNLLV+LIGGIPIAMPTVLSVTMAIGSHRLSQ
Sbjct: 252 CICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 311
Query: 311 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARA 370
QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK ++EV F +DKD +++ AARA
Sbjct: 312 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEV-FVKDLDKDQLLVNAARA 370
Query: 371 SRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGA 430
SR+ENQDAIDA IV ML DP+EAR ITEVHF PFNP DKRTA+TY D NG HR SKGA
Sbjct: 371 SRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDANGNWHRVSKGA 430
Query: 431 PEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPL 490
PEQI+ L + D K+ H +IDKFA+RGLRSL V RQ V K+SPG PW+F+GLLPL
Sbjct: 431 PEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGEPWQFLGLLPL 490
Query: 491 FDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKD-T 549
FDPPRHDSAETIRRALDLGV+VKMITGDQLAIGKETGRRLGMGTNMYPSSALLG+ KD +
Sbjct: 491 FDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDES 550
Query: 550 IVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIXX 609
I LPVD+LIEKADGFAGVFPEHK+EIVKRLQ KHI GMTGDGVNDAPALK ADIGI
Sbjct: 551 IASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPALKRADIGIAV 610
Query: 610 XXXXXXXXXXXXIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTS 669
IVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV+GF+LL
Sbjct: 611 ADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVMGFMLLAL 670
Query: 670 IWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGSYLALTTV 729
IW+FDF PFMVLI+AILNDGTIMTISKDRVKPSP PDSWKL+EIFATGVV+G+YLA+ TV
Sbjct: 671 IWKFDFSPFMVLIVAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGTYLAVMTV 730
Query: 730 IFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIFVTRSRG 789
+FFWA TDFF F V+S+ SG P +L +AVYLQVS +SQALIFVTRSR
Sbjct: 731 VFFWAAESTDFFSAKFGVRSI--SGN---PH----ELTAAVYLQVSIVSQALIFVTRSRS 781
Query: 790 WSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYNIIIYMLLDP 849
WS+ ERPG L++AF +AQL+ATLI+ A +FA I IGW W +IWLY+I+ Y+ LD
Sbjct: 782 WSYVERPGFWLISAFFMAQLIATLIAVYANWNFARIRGIGWGWAGVIWLYSIVFYIPLDI 841
Query: 850 IKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQ---SMDAKID 906
+K + Y+LSGRAW V +TA T++KD+G+ REA WA QRTLHGLQ + D D
Sbjct: 842 LKFIIRYSLSGRAWDNVIENKTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSDMFND 901
Query: 907 KHAFKDINIMXXXXXXXXXITRLRELHTLKGKVESFAKLRGLDVDHVNPHYTV 959
K +++++ + + RLRE HTLKG VES K +GLD++ + HYT+
Sbjct: 902 KSTYRELSEIADQAKRRAEVARLRERHTLKGHVESVVKQKGLDIEAIQQHYTL 954
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| TAIR|locus:2046623 HA5 "H(+)-ATPase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3241 (1145.9 bits), Expect = 0., P = 0.
Identities = 644/956 (67%), Positives = 737/956 (77%)
Query: 8 LEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHXXXXXXXXXXXXXFLG 67
L+ I E+VDL IP+EEVFE LKCT GL+++E RL+VFG FLG
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 68 FMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEEXXXXXXXXX 127
FMWNPLSWVME AALMAI LA GGG+ D+ DFVGI+ LL+INSTISFIEE
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 128 XXXXXXXXXKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
KVLRD +WSE++AS+LVPGD+ISIKLGDIIPADARLL+GDPLKIDQS+LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 188 ESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVLTSI 247
ES+PVTKNP D V+SGS CKQGEIEA+VIATGVHTFFGKAAHLV++T +GHFQ+VLTSI
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 248 GNFCXXXXXXXXXXXXXXXYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHR 307
GNFC Y Q R YR GIDNLLV+LIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTA 367
L QQGAITKRMTAIEEMAGMDVLC DKTGTLTLNKLTVDK L+EV F GV K+ V L A
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEV-FAKGVGKEHVFLLA 362
Query: 368 ARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRAS 427
ARASR+ENQDAIDAAIV MLADPKEARA + EVHF PFNP DKRTALTY D +G HRAS
Sbjct: 363 ARASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRAS 422
Query: 428 KGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGL 487
KGAPEQILNL K D+ +KVH VIDKFAERGLRSL VARQEV KD+PGGPW+ +GL
Sbjct: 423 KGAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGL 482
Query: 488 LPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKK 547
LPLFDPPRHDSAETIRRAL+LGV+VKMITGDQLAIGKETGRRLGMGTNMYPSSALLG+ K
Sbjct: 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVK 542
Query: 548 DTIVG-LPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG 606
D+ +G LPVD+LIEKADGFAGVFPEHK+EIV RLQ R HI GMTGDGVNDAPALK ADIG
Sbjct: 543 DSSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIG 602
Query: 607 IXXXXXXXXXXXXXXIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL 666
I IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GF+
Sbjct: 603 IAVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMF 662
Query: 667 LTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGSYLAL 726
+ IW+FDF PFMVLIIAILNDGTIMTISKDR+KPSP PDSWKLR+IF+TGVV+G Y AL
Sbjct: 663 IALIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFSTGVVLGGYQAL 722
Query: 727 TTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIFVTR 786
TV+FFW + ++DFF N+F V+ L P+ Q+ +A+YLQVS ISQALIFVTR
Sbjct: 723 MTVVFFWVMKDSDFFSNYFGVRPLSQR-----PE----QMMAALYLQVSIISQALIFVTR 773
Query: 787 SRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYNIIIYML 846
SR WS+ E PGLLL+ AF+IAQLVAT I+ A FA I GW W +IWLY+ + Y+
Sbjct: 774 SRSWSYAECPGLLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIP 833
Query: 847 LDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQSMDAKI- 905
LD +K + Y LSG+AW + +TA T +KD+G+E REA WA+ QRTLHGLQ +
Sbjct: 834 LDLLKFGIRYVLSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAEKNNI 893
Query: 906 --DKHAFKDINIMXXXXXXXXXITRLRELHTLKGKVESFAKLRGLDVDHVNPHYTV 959
+K+++ +++ + + RLRE++TLKG VES KL+GLD+D + HYTV
Sbjct: 894 FNEKNSYSELSQIAEQAKRRAEVVRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 949
|
|
| TAIR|locus:2020372 AHA10 "autoinhibited H(+)-ATPase isoform 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3023 (1069.2 bits), Expect = 3.4e-315, P = 3.4e-315
Identities = 607/959 (63%), Positives = 714/959 (74%)
Query: 1 MDKTAIALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHXXXXXXXXX 60
+DK + + +++ +DL +P+EEVFE L+ + GL S + + RL++FG
Sbjct: 5 LDKPLLDPDTFNRKGIDLGILPLEEVFEYLRTSPQGLLSGDAEERLKIFGPNRLEEKQEN 64
Query: 61 XXXXFLGFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEEXX 120
FLGFMWNPLSWVMEAAALMAI LA D+ DF GI+ LL+IN+TISF EE
Sbjct: 65 RFVKFLGFMWNPLSWVMEAAALMAIALANSQSLGPDWEDFTGIVCLLLINATISFFEENN 124
Query: 121 XXXXXXXXXXXXXXXXKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
+VLRDG+W E+DAS+LVPGDIISIKLGDIIPADARLLEGDPLKI
Sbjct: 125 AGNAAAALMARLALKTRVLRDGQWQEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 184
Query: 181 DQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHF 240
DQS LTGESLPVTK G+ V+SGSTCKQGEIEAVVIATG TFFGK A LV+ST GHF
Sbjct: 185 DQSVLTGESLPVTKKKGEQVFSGSTCKQGEIEAVVIATGSTTFFGKTARLVDSTDVTGHF 244
Query: 241 QQVLTSIGNFCXXXXXXXXXXXXXXXYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVT 300
QQVLTSIGNFC + Q R YR+GI+NLLV+LIGGIPIAMPTVLSVT
Sbjct: 245 QQVLTSIGNFCICSIAVGMVLEIIIMFPVQHRSYRIGINNLLVLLIGGIPIAMPTVLSVT 304
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDK 360
+AIGSHRLSQQGAITKRMTAIEEMAGMDVLC DKTGTLTLN LTVDK LIEV F + +DK
Sbjct: 305 LAIGSHRLSQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNSLTVDKNLIEV-FVDYMDK 363
Query: 361 DMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKN 420
D ++L A RASRLENQDAIDAAIVSMLADP+EARA I E+HFLPFNP DKRTA+TY D +
Sbjct: 364 DTILLLAGRASRLENQDAIDAAIVSMLADPREARANIREIHFLPFNPVDKRTAITYIDSD 423
Query: 421 GKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGG 480
GK +RA+KGAPEQ+LNL K +I ++V+++ID+FAE+GLRSL VA QE+P + +SPGG
Sbjct: 424 GKWYRATKGAPEQVLNLCQQKNEIAQRVYAIIDRFAEKGLRSLAVAYQEIPEKSNNSPGG 483
Query: 481 PWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PW F GLLPLFDPPRHDS ETI RAL LGV VKMITGDQLAI KETGRRLGMGTNMYPSS
Sbjct: 484 PWRFCGLLPLFDPPRHDSGETILRALSLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSS 543
Query: 541 ALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPAL 600
+LLG D +PVD+LIE ADGFAGVFPEHK+EIVK LQ KH+VGMTGDGVNDAPAL
Sbjct: 544 SLLGHNNDEHEAIPVDELIEMADGFAGVFPEHKYEIVKILQEMKHVVGMTGDGVNDAPAL 603
Query: 601 KVADIGIXXXXXXXXXXXXXXIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
K ADIGI IVLT+PGLSVIISAVLTSRAIFQRM+NYT+YAVSITIRI
Sbjct: 604 KKADIGIAVADATDAARSSADIVLTDPGLSVIISAVLTSRAIFQRMRNYTVYAVSITIRI 663
Query: 661 VLGFLLLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVI 720
VLGF LL IWE+DFPPFMVLIIAILNDGTIMTISKDRV+PSP+P+SWKL +IFATG+VI
Sbjct: 664 VLGFTLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVRPSPTPESWKLNQIFATGIVI 723
Query: 721 GSYLALTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQA 780
G+YLAL TV+F+W I T FF+ HFHV+S+ N+ + Q++SA+YLQVS ISQA
Sbjct: 724 GTYLALVTVLFYWIIVSTTFFEKHFHVKSIANN---------SEQVSSAMYLQVSIISQA 774
Query: 781 LIFVTRSRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYN 840
LIFVTRSRGWSF ERPG LL+ AFI+AQL ATLI+ A FA I IGWRW +IWLY+
Sbjct: 775 LIFVTRSRGWSFFERPGTLLIFAFILAQLAATLIAVYANISFAKITGIGWRWAGVIWLYS 834
Query: 841 IIIYMLLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLHGLQS 900
+I Y+ LD IK YALSG AW+LV +R+TA T +KD+G++ QR+ +
Sbjct: 835 LIFYIPLDVIKFVFHYALSGEAWNLVLDRKTAFTYKKDYGKDDGSPNVTISQRS-RSAEE 893
Query: 901 MDAKIDKHAFKDINIMXXXXXXXXXITRLRELHTLKGKVESFAKLRGLDVDHVNPHYTV 959
+ + ++ + I RL E+H++ +ES KL+ +D + +TV
Sbjct: 894 LRGSRSRASW-----IAEQTRRRAEIARLLEVHSVSRHLESVIKLKQIDQRMIRAAHTV 947
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P19456 | PMA2_ARATH | 3, ., 6, ., 3, ., 6 | 0.7513 | 0.9822 | 0.9936 | no | no |
| Q9LV11 | PMA11_ARATH | 3, ., 6, ., 3, ., 6 | 0.7895 | 0.9864 | 0.9895 | yes | no |
| Q03194 | PMA4_NICPL | 3, ., 6, ., 3, ., 6 | 0.7518 | 0.9854 | 0.9926 | N/A | no |
| Q58623 | Y1226_METJA | 3, ., 6, ., 3, ., - | 0.4063 | 0.8081 | 0.9627 | yes | no |
| Q08435 | PMA1_NICPL | 3, ., 6, ., 3, ., 6 | 0.7937 | 0.9864 | 0.9885 | N/A | no |
| Q08436 | PMA3_NICPL | 3, ., 6, ., 3, ., 6 | 0.7937 | 0.9864 | 0.9895 | N/A | no |
| P83970 | PMA1_WHEAT | 3, ., 6, ., 3, ., 6 | 0.7559 | 0.9833 | 0.9915 | N/A | no |
| Q42556 | PMA9_ARATH | 3, ., 6, ., 3, ., 6 | 0.7366 | 0.9791 | 0.9842 | no | no |
| Q9SH76 | PMA6_ARATH | 3, ., 6, ., 3, ., 6 | 0.7434 | 0.9843 | 0.9947 | no | no |
| Q9SJB3 | PMA5_ARATH | 3, ., 6, ., 3, ., 6 | 0.7290 | 0.9822 | 0.9926 | no | no |
| P22180 | PMA1_SOLLC | 3, ., 6, ., 3, ., 6 | 0.7958 | 0.9864 | 0.9895 | N/A | no |
| Q9LY32 | PMA7_ARATH | 3, ., 6, ., 3, ., 6 | 0.7622 | 0.9906 | 0.9885 | no | no |
| Q9M2A0 | PMA8_ARATH | 3, ., 6, ., 3, ., 6 | 0.7450 | 0.9854 | 0.9968 | no | no |
| Q9SU58 | PMA4_ARATH | 3, ., 6, ., 3, ., 6 | 0.7884 | 0.9864 | 0.9854 | no | no |
| Q7XPY2 | PMA1_ORYSJ | 3, ., 6, ., 3, ., 6 | 0.7601 | 0.9833 | 0.9915 | no | no |
| P20431 | PMA3_ARATH | 3, ., 6, ., 3, ., 6 | 0.7351 | 0.9843 | 0.9947 | no | no |
| P20649 | PMA1_ARATH | 3, ., 6, ., 3, ., 6 | 0.7533 | 0.9833 | 0.9936 | no | no |
| P23980 | PMA2_SOLLC | 3, ., 6, ., 3, ., 6 | 0.7746 | 0.7309 | 0.9957 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| fgenesh4_pg.C_LG_III000605 | autoinhibited H+ ATPase (961 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| grail3.0023015401 | SubName- Full=Putative uncharacterized protein; (216 aa) | • | 0.899 | ||||||||
| fgenesh4_pm.C_LG_II000842 | inorganic pyrophosphatase (EC-3.6.1.1) (215 aa) | • | 0.899 | ||||||||
| fgenesh4_pg.C_LG_VII001101 | SubName- Full=Putative uncharacterized protein; (213 aa) | • | 0.899 | ||||||||
| eugene3.00090843 | inorganic pyrophosphatase (EC-3.6.1.1) (298 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pm.C_LG_XIV0223 | SubName- Full=Putative uncharacterized protein; (216 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_LG_XIII0040 | vacuolar H+-translocating inorganic pyrophosphatase (EC-3.6.1.1) (757 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_1520062 | SubName- Full=Putative uncharacterized protein; (768 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_1330100 | vacuolar H+-translocating inorganic pyrophosphatase (EC-3.6.1.1) (757 aa) | • | 0.899 | ||||||||
| estExt_Genewise1_v1.C_LG_X3050 | vacuolar H+-translocating inorganic pyrophosphatase (636 aa) | • | 0.899 | ||||||||
| estExt_Genewise1_v1.C_LG_I4261 | SubName- Full=Putative uncharacterized protein; (296 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 959 | |||
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-179 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-113 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 5e-93 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 3e-83 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 5e-76 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 2e-72 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-68 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 5e-63 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 4e-62 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 5e-57 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-55 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-53 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 5e-38 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 3e-37 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 3e-35 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 5e-34 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-33 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 4e-32 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 2e-31 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 4e-29 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 6e-29 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 9e-29 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 1e-26 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 4e-21 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 1e-17 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 1e-15 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 4e-13 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 7e-11 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 9e-08 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 2e-07 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 2e-04 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 5e-04 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 1153 bits (2985), Expect = 0.0
Identities = 448/783 (57%), Positives = 559/783 (71%), Gaps = 32/783 (4%)
Query: 36 GLSSDEVQSRLEVFGHNKLEEKKENKILKFLGFMWNPLSWVMEAAALMAITLARGGGKDV 95
GL+S E + RL +G N+L EKK + +LKFLGF WNPLSWVMEAAA++AI L
Sbjct: 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE------- 53
Query: 96 DYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPG 155
++ DFV IL LL++N+TI FIEEN AGNA AL LAPKA+VLRDGKW E AS LVPG
Sbjct: 54 NWVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPG 113
Query: 156 DIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVV 215
D++ +K+GDI+PAD RL EGD +++DQ+ALTGESLPVTK GD YSGST KQGE EAVV
Sbjct: 114 DVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVV 173
Query: 216 IATGVHTFFGKAAHLVEST-THVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGY 274
ATG++TFFGKAA LV+ST T GH Q++L+ IG F I I + ++IE+++++ + +
Sbjct: 174 TATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233
Query: 275 RVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 334
R G+ LV+L+GGIPIAMP VLSVTMA+G+ L+++ AI R+TAIEE+AGMD+LCSDK
Sbjct: 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDK 293
Query: 335 TGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEAR 394
TGTLTLNKL++D+IL F NG DKD V+L AA ASR E+QDAID A++ D KEAR
Sbjct: 294 TGTLTLNKLSIDEILP---FFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEAR 350
Query: 395 AEITEVHFLPFNPTDKRTALTYTDK-NGKMHRASKGAPEQILNLAWNKADIEKKVHSVID 453
+ F+PF+P DKRT T D GK + +KGAP+ IL+L NK +IE+KV +D
Sbjct: 351 DGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVD 410
Query: 454 KFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVK 513
+ A RG R+LGVAR G W F+GLLPLFDPPRHD+ ETI RA LGV VK
Sbjct: 411 ELASRGYRALGVART--------DEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVK 462
Query: 514 MITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHK 573
M+TGD LAI KET RRLG+GTN+Y + LL + + +++E ADGFA VFPEHK
Sbjct: 463 MVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGLGEMVEDADGFAEVFPEHK 522
Query: 574 FEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVII 633
+EIV+ LQ R H+VGMTGDGVNDAPALK AD+GIAVA +TDAARSA+DIVLTEPGLSVI+
Sbjct: 523 YEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIV 582
Query: 634 SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTSIWEFDFPPFMVLIIAILNDGTIMT 693
A+L SR IFQRMK+Y IY ++ TIRIV F LL I F FPP MV+IIAILNDGTIMT
Sbjct: 583 DAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVIIAILNDGTIMT 642
Query: 694 ISKDRVKPSPSPDSWKLREIFATGVVIGSYLALTTVIFFWAIFETDFFQNHFHVQSLRNS 753
I+ D VKPS P W LRE+F V+G YL ++T + +T FF + F +Q
Sbjct: 643 IAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTTFFIDKFGLQL---- 698
Query: 754 GGKKIPKVLNGQLASAVYLQVSTISQALIFVTRSRGWSFTERPGLLLVTAFIIAQLVATL 813
L+G L S +YLQVS A IFVTR+ G+ ++ERPG LL AF+IAQ++AT
Sbjct: 699 --------LHGNLQSFIYLQVSISGHATIFVTRTHGFFWSERPGKLLFGAFVIAQIIATF 750
Query: 814 ISA 816
I+
Sbjct: 751 IAV 753
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 544 bits (1403), Expect = e-179
Identities = 265/919 (28%), Positives = 417/919 (45%), Gaps = 94/919 (10%)
Query: 1 MDKTAIALEAISKEAVDLENIPIEEVFENLKCTSD-GLSSDEVQSRLEVFGHNKL-EEKK 58
+ ++ E ++ E+ L + GLS +EV+ RL+ +G N+L EEKK
Sbjct: 8 FSVNKSSSTPVTSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKK 67
Query: 59 ENKILKFLGFMWNPLSWVMEAAAL--MAITLARGGGKDVDYHDFVGILALLIINSTISFI 116
+ + KFL +P ++ AAL + G D IL +++IN+ + F+
Sbjct: 68 RSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAGVDAIV-----ILLVVVINALLGFV 122
Query: 117 EENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGD 176
+E A A AL +PKAKVLRDGK+ E AS LVPGDI+ ++ GD++PAD RLLE
Sbjct: 123 QEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESS 182
Query: 177 PLKIDQSALTGESLPVTKNPGDG--------------VYSGSTCKQGEIEAVVIATGVHT 222
L++D+SALTGESLPV K ++SG+T G + +V+ATG T
Sbjct: 183 DLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFET 242
Query: 223 FFGKAAHLVESTTHV-GHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNL 281
FGK A L+ + V Q+ L +G F + + ++ +++ G+
Sbjct: 243 EFGKIARLLPTKKEVKTPLQRKLNKLGKF----LLVLALVLGALVFVVGLFRGGNGLLES 298
Query: 282 ----LVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 337
L + + +P +P V+++ +A+G+ R+++ AI + + AIE + +DV+CSDKTGT
Sbjct: 299 FLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGT 358
Query: 338 LTLNKLTVDKILI--------EVVFGNGVDKDMVILTAARAS--RLENQ------DAIDA 381
LT NK+TV KI I + + +L AA + E D +
Sbjct: 359 LTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEG 418
Query: 382 AIVSMLA------DPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQIL 435
A+V D E + +PF+ KR ++ GK KGAPE IL
Sbjct: 419 ALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVIL 478
Query: 436 NLAWNKADIE-------KKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWE----F 484
+ ++E + + + + A GLR L VA +++ KD E F
Sbjct: 479 ERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVF 538
Query: 485 IGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG 544
+GL + DPPR D E I + G+ V MITGD + + G+ + + G
Sbjct: 539 LGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDG 598
Query: 545 EKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVAD 604
+ D + + +L+E+ FA V PE K IV+ LQ H+V MTGDGVNDAPALK AD
Sbjct: 599 AELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAAD 658
Query: 605 IGIAVADS-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 663
+GIA+ TDAA+ A+DIVL + + I+ AV+ R ++ +K + +Y +S + VL
Sbjct: 659 VGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLT 718
Query: 664 FLLLTSIWEFDFP--PFMVLIIAILNDGTI---MTISK---DRVKPSPSPDSWKL--REI 713
L+ + F P P +L I +L D + + D +K P L R+I
Sbjct: 719 LLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKI 778
Query: 714 FATGVVIGSYLALTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQ 773
F ++I L+ I + ++ F N + L + +
Sbjct: 779 FWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDL------------FQALLQTTAFTV 826
Query: 774 VSTISQALIFVTRSRGWSFTER-----PGLLLVTAFIIAQLVATLISALATSDFAGIHKI 828
+ I L RSRG F L L II + + +
Sbjct: 827 LVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPL 886
Query: 829 GWR-WTSIIWLYNIIIYML 846
W I + +++Y++
Sbjct: 887 SLFEWLIAIAVALLLLYIV 905
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 358 bits (922), Expect = e-113
Identities = 184/586 (31%), Positives = 282/586 (48%), Gaps = 78/586 (13%)
Query: 103 ILALLIINSTISFIEENNAGNAAAALMARLAPKAK--VLRDGKWSEEDASVLVPGDIISI 160
IL L+++ + ++ A + +L RL VLR+G W E A LVPGD++ +
Sbjct: 2 ILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNG-WKEIPAKDLVPGDVVLV 60
Query: 161 KLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNP----------GDGVYSGSTCKQGE 210
K G+ +PAD LL G +D+S LTGES PV K GD V++G+ G
Sbjct: 61 KSGETVPADGVLLSGS-CFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGT 119
Query: 211 IEAVVIATGVHTFFGKAAHLVESTTH-VGHFQQVLTSIGNF----CICSIAIGMIIEIII 265
+ VV TG+ T G+ A +V++ Q + NF + +A+ + + +
Sbjct: 120 LIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIFILFLLLLALAVFL-YLF 178
Query: 266 IYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 325
I G + L++L+ +P A+P ++V +A+G RL+++G + + + A+EE+
Sbjct: 179 IRGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEELG 238
Query: 326 GMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLENQDAIDAAIV- 384
+D LCSDKTGTLT NK+T+ V G + + L A + L + D ++ A++
Sbjct: 239 KVDYLCSDKTGTLTKNKMTLQG----VYIDGGKEDNSSSLVACDNNYL-SGDPMEKALLK 293
Query: 385 --SMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWNKA 442
++ + E + PF+ KR ++ +G KGAPE IL N
Sbjct: 294 SAELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCNN-- 351
Query: 443 DIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETI 502
+ A +GLR L A +E+ EF+GL+ DP R D+ ETI
Sbjct: 352 -----YEEKYLELARQGLRVLAFASKELE--------DDLEFLGLITFEDPLRPDAKETI 398
Query: 503 RRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKA 562
G+ V MITGD + K + LG+
Sbjct: 399 EELKAAGIKVVMITGDNVLTAKAIAKELGI------------------------------ 428
Query: 563 DGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDI 622
D FA V PE K +IV+ LQ + HIV MTGDGVNDAPALK AD+GIA+ A++A+DI
Sbjct: 429 DVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAM-----GAKAAADI 483
Query: 623 VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLT 668
VL + LS I+ AV R IF +K+ +A++ + ++ LLL
Sbjct: 484 VLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLI 529
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 314 bits (806), Expect = 5e-93
Identities = 215/749 (28%), Positives = 349/749 (46%), Gaps = 111/749 (14%)
Query: 21 IPIEEVFENLKCT-SDGL-SSDEVQSRLEVFGHNKLE-EKKENKILKFLG-FMWNPLSWV 76
+ +EE L+ +GL SS E R G N+ + E+ E+ KFL F+ NPL +
Sbjct: 7 LSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILL 66
Query: 77 MEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKA 136
+ A+A++++ + + D V I ++I T+ F++E + + AL + P+
Sbjct: 67 LIASAVISVFMG-------NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPEC 119
Query: 137 KVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTK-- 194
++R+GK AS LVPGD++ + +GD +PAD R++E L ID+S LTGE+ PV+K
Sbjct: 120 HLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVT 179
Query: 195 -----NPGDGV-------YSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST-THVGHFQ 241
+ + G+ + G + +V+ TG +T FG ++++ Q
Sbjct: 180 APIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQ 239
Query: 242 QVLTSIGN--FCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIG------GIPIAM 293
+ + +G + IG+I + G+ G D L + I IP +
Sbjct: 240 KSMDLLGKQLSLVSFGVIGVICLV---------GWFQGKDWLEMFTISVSLAVAAIPEGL 290
Query: 294 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILI--- 350
P +++VT+A+G R+S++ AI +++ ++E + ++V+CSDKTGTLT N +TV KI
Sbjct: 291 PIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDG 350
Query: 351 --------------EVVFGNGVDKDMVILTAARA---------SRLENQDAI------DA 381
EV+ V + +R ++ N+ D
Sbjct: 351 LHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDV 410
Query: 382 AIVSMLA-----DPKEARAEITEVHFLPFNPTDK--RTALTYTDKNGKMHRASKGAPEQI 434
A++ +L D +E + EV PF+ K + +M KGA EQ+
Sbjct: 411 ALIELLMKFGLDDLRETYIRVAEV---PFSSERKWMAVKCVHRQDRSEMCFM-KGAYEQV 466
Query: 435 LNLAWN-----------KADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWE 483
L + + A GLR + A G
Sbjct: 467 LKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFA--------SGPEKGQLT 518
Query: 484 FIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 543
F+GL+ + DPPR E + + GV + MITGD RRLGM S ++
Sbjct: 519 FLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMP--SKTSQSVS 576
Query: 544 GEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVA 603
GEK D + + ++ K FA PEHK +IVK LQ R +V MTGDGVNDAPALK+A
Sbjct: 577 GEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLA 636
Query: 604 DIGIAVADS-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 662
DIG+A+ + TD A+ A+D++LT+ + I+SA+ + IF +KN+ + +S ++ L
Sbjct: 637 DIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSV-AAL 695
Query: 663 GFLLLTSIWEFDFP--PFMVLIIAILNDG 689
+ L ++ F P +L I IL DG
Sbjct: 696 SLIALATLMGFPNPLNAMQILWINILMDG 724
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 287 bits (735), Expect = 3e-83
Identities = 218/778 (28%), Positives = 362/778 (46%), Gaps = 67/778 (8%)
Query: 22 PIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKL-EEKKENKILKFLGFMWNPLSWVMEAA 80
E + L GL++ EV RL FG N+ EEKK + + NP +++ A
Sbjct: 19 GKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYIL--A 76
Query: 81 ALMAITLARGGGKDVDYHDFVGILALLIINSTI-SFIEENNAGNAAAALMARLAPKAKVL 139
LM ++ D + I+AL+++ S + FI+E+ A AA AL + A VL
Sbjct: 77 MLMGVSYL------TDDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVL 130
Query: 140 R------DGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPV- 192
R +G E LVPGD+I + GDIIPADAR++ L I+QSALTGESLPV
Sbjct: 131 RVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVE 190
Query: 193 ----TKNPGDG--------VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHF 240
K D + G+ G +AVV+ATG T+FG A F
Sbjct: 191 KFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAF 250
Query: 241 QQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVT 300
+ + S+ I + + M+ +++I G + + L + +G P +P ++S
Sbjct: 251 DKGVKSVSKLLIRFMLV-MVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSN 309
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDK 360
+A G+ +S++ I K ++AI+ MD+LC+DKTGTLT +K+ L + + +G
Sbjct: 310 LAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKI----ELEKHIDSSGETS 365
Query: 361 DMVILTAARASRLEN--QDAIDAAIVSMLAD--PKEARAEITEVHFLPFNPTDKRTALTY 416
+ V+ A S + ++ +D A+++ L + ++ + +V +PF+ +R ++
Sbjct: 366 ERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVV 425
Query: 417 TDKNGKMHRASKGAPEQILNLAWNK---------ADIEKK-VHSVIDKFAERGLRSLGVA 466
++ KGA E++L + +K ++ EK + + + +G+R + VA
Sbjct: 426 ENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVA 485
Query: 467 RQEVPAGTKD-SPGGPWEFI--GLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIG 523
+ + G D + + I G L DPP+ + E I G++VK++TGD +
Sbjct: 486 TKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVT 545
Query: 524 KETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQAR 583
+ +G+ N LLG + + + + K FA + P K I+ L+
Sbjct: 546 ARICQEVGIDAN----DFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKA 601
Query: 584 KHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIF 643
H VG GDG+NDAPAL+ AD+GI+V + D A+ ASDI+L E L V+ V+ R F
Sbjct: 602 GHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASDIILLEKSLMVLEEGVIEGRNTF 661
Query: 644 QRMKNYTIYAVSITIRIVLGFLLLTSIWEFDFP--PFMVLIIAILNDGTIMTISKDRVKP 701
+ Y S V L+ ++ F P +LI +L D + +T+ D++
Sbjct: 662 GNILKYLKMTASSNFGNVFSVLVASAFIPF-LPMLSLHLLIQNLLYDFSQLTLPWDKMDR 720
Query: 702 S--PSPDSWKLREIFATGVVIG---SYLALTTVIFFWAIFETDFFQNHFHVQSLRNSG 754
P W+ + + + IG S + T + W +F N Q+L SG
Sbjct: 721 EFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFSA----NTVEEQALFQSG 774
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 267 bits (684), Expect = 5e-76
Identities = 203/692 (29%), Positives = 333/692 (48%), Gaps = 82/692 (11%)
Query: 10 AISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKENKILKFLGFM 69
++S + +P EE+++ +GL+ EV+S E G N+L +K L + +
Sbjct: 41 SLSARCLKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKP---LPWWVHL 97
Query: 70 W----NPLSWVMEAAALMA-----ITLARGGGKDVDYHDFVGILALLIINST-ISFIEEN 119
W NP + ++ ++ + A G++AL++ ST ++FI+E
Sbjct: 98 WVCYRNPFNILLTILGAISYATEDLFAA-------------GVIALMVAISTLLNFIQEA 144
Query: 120 NAGNAAAALMARLAPKAKVLR------DGKWSEEDASVLVPGDIISIKLGDIIPADARLL 173
+ AA AL A ++ A VLR + W E LVPGDII + GD+IPAD R+L
Sbjct: 145 RSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRIL 204
Query: 174 EGDPLKIDQSALTGESLPVTKNPGDG-------------VYSGSTCKQGEIEAVVIATGV 220
+ L + Q++LTGESLPV K + G+ G +AVVIATG
Sbjct: 205 QARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGA 264
Query: 221 HTFFGKAAHLVESTTH-VGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGID 279
+T+FG+ A V FQQ ++ + I + M +++I G+ + +
Sbjct: 265 NTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLI-RFMLVMAPVVLLINGYTKGDWWEAAL 323
Query: 280 NLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 339
L + +G P +P +++ T+A G+ +LS+Q I KR+ AI+ MD+LC+DKTGTLT
Sbjct: 324 FALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLT 383
Query: 340 LNKLTVDKILIEV---VFGNGVDK--DMVILTAARASRLENQDAIDAAIVSMLADPKEAR 394
DKI++E + G ++ L + + L+N +D A++ D + AR
Sbjct: 384 Q-----DKIVLENHTDISGKTSERVLHSAWLNSHYQTGLKN--LLDTAVLEG-VDEESAR 435
Query: 395 AEIT---EVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWN----------K 441
+ + ++ +PF+ +R ++ + KGA E+ILN+
Sbjct: 436 SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLD 495
Query: 442 ADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWE----FIGLLPLFDPPRHD 497
+ +++ V D +GLR + VA + +PA + E G + DPP+
Sbjct: 496 DIMLRRIKRVTDTLNRQGLRVVAVATKYLPA-REGDYQRADESDLILEGYIAFLDPPKET 554
Query: 498 SAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDD 557
+A ++ GV+VK++TGD + + +G+ L+G +T+ + +
Sbjct: 555 TAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAG----EVLIGSDIETLSDDELAN 610
Query: 558 LIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAAR 617
L E+ FA + P HK IV L+ H+VG GDG+NDAPAL+ ADIGI+V + D AR
Sbjct: 611 LAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAR 670
Query: 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 649
A+DI+L E L V+ V+ R F M Y
Sbjct: 671 EAADIILLEKSLMVLEEGVIEGRRTFANMLKY 702
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 257 bits (658), Expect = 2e-72
Identities = 222/800 (27%), Positives = 370/800 (46%), Gaps = 88/800 (11%)
Query: 22 PIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKL-EEKKENKILKFLGFMWNPLSWV-MEA 79
+EE NL GL+ ++ RL+ +G N++ EK + +++ L NP +V M
Sbjct: 31 SLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVL 90
Query: 80 AALMAIT---LARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKA 136
AA+ T L G++ D + IL +++++ + F +E + AA AL A + A
Sbjct: 91 AAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTA 150
Query: 137 KVLR------DGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESL 190
VLR + E LVPGDI+ + GD+IPAD RL+E L I Q+ LTGE+L
Sbjct: 151 TVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEAL 210
Query: 191 PVTK--------------NPGDGV---------YSGSTCKQGEIEAVVIATGVHTFFGKA 227
PV K D + G+ G AVV+ATG T+FG
Sbjct: 211 PVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSL 270
Query: 228 AHLVESTTHVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIG 287
A + T F + + S+ I + M+ +++I G + + + L + +G
Sbjct: 271 AKSIVGTRAQTAFDRGVNSVSWLLI-RFMLVMVPVVLLINGFTKGDWLEALLFALAVAVG 329
Query: 288 GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK 347
P +P ++S +A G+ ++++ + KR+ AI+ MDVLC+DKTGTLT D+
Sbjct: 330 LTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQ-----DR 384
Query: 348 ILIEV-VFGNGVDKDMVILTAARASRLEN--QDAIDAAIVSMLADPKEARAEIT---EVH 401
I++E + +G + V+ A S ++ ++ +D A+V+ A+ + +V
Sbjct: 385 IILEHHLDVSGRKDERVLQLAWLNSFHQSGMKNLMDQAVVA-FAEGNPEIVKPAGYRKVD 443
Query: 402 FLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVID-------- 453
LPF+ +R ++ D G+ KGA E++L +A + D V + +
Sbjct: 444 ELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRD-GDTVRPLDEARRERLLA 502
Query: 454 ---KFAERGLRSLGVARQEVPAGTKDSP---GGPWEFI--GLLPLFDPPRHDSAETIRRA 505
+ G R L VA +E+P G + + + G L DPP+ +A I
Sbjct: 503 LAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAAL 562
Query: 506 LDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGF 565
+ GV+VK++TGD + + R +G+ P LLG + + + + +E+ F
Sbjct: 563 RENGVAVKVLTGDNPIVTAKICREVGLE----PGEPLLGTEIEAMDDAALAREVEERTVF 618
Query: 566 AGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLT 625
A + P K ++K LQA H VG GDG+NDAPAL+ AD+GI+V D A+ ++DI+L
Sbjct: 619 AKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADIAKESADIILL 678
Query: 626 EPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTSIWEFDFPPFM------ 679
E L V+ V+ R F + Y S V L+ ++ F PF+
Sbjct: 679 EKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASA-----FIPFLPMLAIH 733
Query: 680 VLIIAILNDGTIMTISKDRVKPS--PSPDSWKLREIFATGVVIG---SYLALTTVIFFWA 734
+L+ ++ D + +++ D++ P W + I + IG S +TT W
Sbjct: 734 LLLQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWF 793
Query: 735 IFETDFFQNHFHVQSLRNSG 754
+F N +Q+L SG
Sbjct: 794 VFAA----NSVEMQALFQSG 809
|
Length = 903 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 246 bits (631), Expect = 1e-68
Identities = 184/706 (26%), Positives = 310/706 (43%), Gaps = 78/706 (11%)
Query: 37 LSSDEVQSRLEVFGHNKLEEKKENKILKFLGFMWNPLSWVM----EAAALMAITLARG-- 90
LSS ++ R +V+G N+L EK FL +W LS AA++++ L
Sbjct: 62 LSSSTLERREKVYGKNELPEKPP---KSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEP 118
Query: 91 ----GGKDVDYHDFVGILALLIINSTISFIEENNAGNAAAALM-ARLAPKAKVLRDGKWS 145
+ + + V IL +I+ ++ + + L + A K V+R G+
Sbjct: 119 GEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQ 178
Query: 146 EEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGDGVY--SG 203
+ +V GDI+S+ GD++PAD + G L+ID+S++TGES P+ K P + SG
Sbjct: 179 QISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGPVQDPFLLSG 238
Query: 204 STCKQGEIEAVVIATGVHTFFGKAAHLV-----ESTTHVGHFQQVLTSIGNFCICSIAIG 258
+ +G +V A GV++F GK + +ST ++ IG F + S +
Sbjct: 239 TVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSELAGLIGKFGMGSAVLL 298
Query: 259 MII----EIIIIYGHQERGYRVGIDNLLVILIGGIPI---AMPTV--LSVTMAI--GSHR 307
++ + I R L I + I A+P L+VT+A+ +
Sbjct: 299 FLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKK 358
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTA 367
+ + + + + A E M +CSDKTGTLT N ++V + I N D +
Sbjct: 359 MMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKH 418
Query: 368 ARASRLEN---------------QDAI-----DAAIVSM----LADPKEARAEITEVHFL 403
R +E + A + A++ L D +E RAE V
Sbjct: 419 VRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLDFGLLLLRDYQEVRAEEKVVKIY 478
Query: 404 PFNPTDKRTALTYTDKNGKMHRASKGAPEQIL-----------NLAWNKADIEKKVHSVI 452
PFN K ++ GK KGA E +L D + + VI
Sbjct: 479 PFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCADVI 538
Query: 453 DKFAERGLRSLGVARQEVPAGT---KDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLG 509
+ A LR++ +A ++ KD P IG++ + DP R E ++ G
Sbjct: 539 EPLASDALRTICLAYRDFAPEEFPRKDYPNKGLTLIGVVGIKDPLRPGVREAVQECQRAG 598
Query: 510 VSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVF 569
++V+M+TGD + K R G+ T + A+ G++ ++V +D ++ K A
Sbjct: 599 ITVRMVTGDNIDTAKAIARNCGILT--FGGLAMEGKEFRSLVYEEMDPILPKLRVLARSS 656
Query: 570 PEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADS-TDAARSASDIVLTEPG 628
P K +V L+ +V +TGDG NDAPALK+AD+G ++ S T+ A+ ASDI+L +
Sbjct: 657 PLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDN 716
Query: 629 LSVIISAVLTSRAIFQRMKNY-----TIYAVSITIRIVLGFLLLTS 669
+ I+ AV R ++ ++ + T+ V++ + V + TS
Sbjct: 717 FASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTS 762
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 226 bits (579), Expect = 5e-63
Identities = 153/565 (27%), Positives = 231/565 (40%), Gaps = 89/565 (15%)
Query: 121 AGNAAAALMARLAPKAKVLR-DGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLK 179
A A AL+ A V+R DG+ E + GDI+ ++ G+ IP D ++ G
Sbjct: 198 ARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSS- 256
Query: 180 IDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVE-STTHVG 238
+D+S LTGESLPV K PGD V++G+ G + V G T + LVE + +
Sbjct: 257 VDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKA 316
Query: 239 HFQQVLTSI-GNFCICSIAIGMIIEII-IIYGHQERGYRVGIDNLLVILIGGIPIAMPTV 296
Q++ + F + I + + ++G + + L +L+ P A+
Sbjct: 317 PIQRLADRVASYFVPVVLVIAALTFALWPLFGGG--DWETALYRALAVLVIACPCAL--G 372
Query: 297 LSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVF 354
L+ AI G R +++G + K A+E +A +D + DKTGTLT K V +VV
Sbjct: 373 LATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEV----TDVVA 428
Query: 355 GNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTAL 414
+G + +++ L AA E+ + AIV A+ E E
Sbjct: 429 LDGDEDELLALAAALEQHSEH--PLAKAIVKAAAERGLPDVEDFEEIP------------ 474
Query: 415 TYTDKNGK-------MHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVAR 467
G+ R G L + + I+ G + VA
Sbjct: 475 ------GRGVEAEVDGERVLVGNAR----LLGEEGIDLPLLSERIEALESEGKTVVFVAV 524
Query: 468 QEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETG 527
+ +G++ L D R D+ E I LG+ V M+TGD +
Sbjct: 525 DG-------------KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIA 571
Query: 528 RRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIV 587
+ LG I++ A + PE K EIV+ LQA V
Sbjct: 572 KELG---------------------------IDEV--RAELLPEDKAEIVRELQAEGRKV 602
Query: 588 GMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
M GDG+NDAPAL AD+GIA+ TD A A+D+VL LS + A+ SRA + +K
Sbjct: 603 AMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIK 662
Query: 648 -NYTIYAVSITIRIVLGFLLLTSIW 671
N I I L L + W
Sbjct: 663 QNLFWAFGYNAIAIPLAAGGLLTPW 687
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 220 bits (563), Expect = 4e-62
Identities = 155/592 (26%), Positives = 247/592 (41%), Gaps = 85/592 (14%)
Query: 97 YHDFVGILALLIINSTIS-FIEENNAGNAAAAL--MARLAPK-AKVLR-DGKWSEEDASV 151
V ALL+ + +EE G A+ AL + LAP A+VL+ DG E
Sbjct: 14 AMGLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEE 73
Query: 152 LVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEI 211
L GDI+ ++ G+ IP D ++ G+ +D+SALTGES+PV K GD V++G+ G +
Sbjct: 74 LQVGDIVIVRPGERIPVDGVVISGESE-VDESALTGESMPVEKKEGDEVFAGTINGDGSL 132
Query: 212 EAVVIATGVHTFFGKAAHLV-ESTTHVGHFQQVLTSI-GNFCICSIAIGMIIEII-IIYG 268
V G + + LV E+ + Q++ I + +AI ++ ++ + G
Sbjct: 133 TIRVTKLGEDSTLAQIVELVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALG 192
Query: 269 HQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAI--GSHRLSQQGAITKRMTAIEEMAG 326
YR L +L+ P A+ L+ +AI +++G + K A+E++A
Sbjct: 193 ALGALYRA-----LAVLVVACPCAL--GLATPVAILVAIGVAARRGILIKGGDALEKLAK 245
Query: 327 MDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLENQDAIDAAIVSM 386
+ + DKTGTLT K TV I + + +L A A + + AIV
Sbjct: 246 VKTVVFDKTGTLTTGKPTVVDI---EPLDDASISEEELLALAAALEQSSSHPLARAIV-- 300
Query: 387 LADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQIL--NLAWNKADI 444
A+ + D GK A+ E++ N + + I
Sbjct: 301 ------RYAKKRGLE--LPKQEDVEE------VPGKGVEATVDGGEEVRIGNPRFLELAI 346
Query: 445 EK--KVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETI 502
E ++++ +G + VA E +G++ L D R ++ E I
Sbjct: 347 EPISASPDLLNEGESQGKTVVFVAVDG-------------ELLGVIALRDQLRPEAKEAI 393
Query: 503 RRALDLGV-SVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEK 561
G + M+TGD + + LG +D++
Sbjct: 394 AALKRAGGIKLVMLTGDNRSAAEAVAAELG-----------------------IDEV--- 427
Query: 562 ADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASD 621
A + PE K IVK LQ +V M GDG+NDAPAL AD+GIA+ +D A A+D
Sbjct: 428 ---HAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAAD 484
Query: 622 IVLTEPGLSVIISAVLTSRAIFQRMK-NYTIYAVSITIRIVLGFLLLTSIWE 672
IVL LS + +A+ SR + +K N + I L L +W
Sbjct: 485 IVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLPLWL 536
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 195 bits (498), Expect = 5e-57
Identities = 82/223 (36%), Positives = 130/223 (58%), Gaps = 4/223 (1%)
Query: 103 ILALLIINSTISFIEENNAGNAAAALMARLAPKA-KVLRDGKWSEEDASVLVPGDIISIK 161
IL L++IN+ + +E A A AL L P A V+RDGK E A LV GDI+ +K
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 162 LGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVH 221
GD +PAD R++EG L++D+SALTGESLPV K+ GD V++G+ GE++ +V ATG
Sbjct: 62 PGDRVPADGRIIEGS-LEVDESALTGESLPVEKSRGDTVFAGTVVLSGELKVIVTATGED 120
Query: 222 TFFGKAAHLVESTTHV-GHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDN 280
T GK A LVE Q++L + + I + + I + +I+ + + +
Sbjct: 121 TELGKIARLVEEAKSAKTPLQRLLDKLAKI-LVPIVLALAILVFLIWFFRGGDFLEALLR 179
Query: 281 LLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 323
L +L+ P A+P + + +A+G+ RL+++G + K ++A+E
Sbjct: 180 ALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 208 bits (532), Expect = 1e-55
Identities = 192/772 (24%), Positives = 332/772 (43%), Gaps = 124/772 (16%)
Query: 8 LEAISKE-AVDLENIPIEEVFENLKCT-SDGLSSDEVQSRLEVFGHNKLEEKKEN-KILK 64
L+ + KE +D + ++E+ S GLS+ L G N L + +K
Sbjct: 6 LDELKKEVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVK 65
Query: 65 FLGFMWNPLSWVMEAAALM-----AITLARGGGKDVDYHDFVGIL--ALLIINSTISFIE 117
F ++ S ++ A++ I + D + ++G++ A++II S+ +
Sbjct: 66 FCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQND-NLYLGVVLSAVVIITGCFSYYQ 124
Query: 118 ENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDP 177
E + + + +A V+RDG+ +A +V GD++ +K GD IPAD R++
Sbjct: 125 EAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG 184
Query: 178 LKIDQSALTGESLPVTKNPG----------DGVYSGSTCKQGEIEAVVIATGVHTFFGKA 227
K+D S+LTGES P T++P + + + C +G +V+ TG T G+
Sbjct: 185 CKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRI 244
Query: 228 AHL-----VEST---THVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGID 279
A L T + HF ++T + F S I+ +I+ Y E +
Sbjct: 245 ASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSF---FILSLILGYTWLE-----AVI 296
Query: 280 NLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 339
L+ I++ +P + ++V + + + R++++ + K + A+E + +CSDKTGTLT
Sbjct: 297 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 356
Query: 340 LNKLTV-----DKILIEV-----VFGNGVDKDMVILTA--------ARASRLENQDAI-- 379
N++TV D + E G DK A RA Q+ +
Sbjct: 357 QNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPI 416
Query: 380 -------DAAIVSML-------ADPKEARAEITEVHFLPFNPTDKRTALTYT--DKNGKM 423
DA+ ++L E R +V +PFN T+K + D
Sbjct: 417 LKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPR 476
Query: 424 H-RASKGAPEQILNLAWN----------KADIEKKVHSVIDKFAERGLRSLGVARQEVPA 472
H KGAPE+IL + ++++ + + G R LG +P
Sbjct: 477 HLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPD 536
Query: 473 GTKDSPGG----------PWE---FIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQ 519
+ P G P + F+GL+ + DPPR + + + G+ V M+TGD
Sbjct: 537 --EQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDH 594
Query: 520 -------------LAIGKETGRRLGMGTNMYPSSALLGEKKDTIV-GLPVDDLI-EKADG 564
++ G ET + N+ S + K +V G + D+ E+ D
Sbjct: 595 PITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDE 654
Query: 565 ---------FAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADS-TD 614
FA P+ K IV+ Q + IV +TGDGVND+PALK ADIG+A+ + +D
Sbjct: 655 ILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSD 714
Query: 615 AARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL 666
++ A+D++L + + I++ V R IF +K Y ++ I + FL+
Sbjct: 715 VSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLI 766
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 195 bits (499), Expect = 2e-53
Identities = 152/615 (24%), Positives = 256/615 (41%), Gaps = 90/615 (14%)
Query: 73 LSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNAAAAL--MA 130
+++ AL+A + G + ++ +++ ++E G A+ AL +A
Sbjct: 30 VAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILLGR---WLEMLAKGRASDALSKLA 86
Query: 131 RLAPK--AKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGE 188
+L P + DG+ E +L PGDI+ + G+ IP D ++EG+ ++D+S +TGE
Sbjct: 87 KLQPSTATLLTDDGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGES-EVDESLVTGE 145
Query: 189 SLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVE----STTHVGHFQQVL 244
SLPV K GD V +G+ G + ATG T + LV S + +
Sbjct: 146 SLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKV 205
Query: 245 TSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIG 304
+ +IA+ + +I+ V + L++ + +A PTV+ A+
Sbjct: 206 AGYFVPVVIAIALITFVIWLILGADFVFALEVAVTVLIIACPCALGLATPTVI----AVA 261
Query: 305 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVI 364
+ ++ G + K A+E A +D + DKTGTLT K TV + VFG +++
Sbjct: 262 TGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVH---VFGESDRDELLA 318
Query: 365 LTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMH 424
L AA + E+ + AIVS +++++ +P T G
Sbjct: 319 LAAALEAGSEH--PLAKAIVSYAKAKGITLSQVSDFKAIP----GIGVEGTV---EGHTI 369
Query: 425 RASKGAPEQILNLAW-NKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWE 483
Q+ N + ++ G S+ VA E
Sbjct: 370 --------QLGNEKLLGENGLKTDGEVE----EGGGTTSVLVAVNG-------------E 404
Query: 484 FIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 543
G+L L D + ++ E I+ G+ M+TGD K + LG
Sbjct: 405 LAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELG------------ 452
Query: 544 GEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVA 603
IE + A V P+ K ++K+LQ + +V M GDG+NDAPAL A
Sbjct: 453 ---------------IE--NVRAEVLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQA 495
Query: 604 DIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN-------YTIYAVSI 656
D+GIA+ TD A A+D+VL L+ + +A+ SR +R+K Y + A+ I
Sbjct: 496 DVGIAIGAGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPI 555
Query: 657 TIRIVLGFLLLTSIW 671
++ +L S
Sbjct: 556 AAGVLYPAGILLSPA 570
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 5e-38
Identities = 133/516 (25%), Positives = 204/516 (39%), Gaps = 95/516 (18%)
Query: 320 AIEEMAGMDVLCSD-------------KTGTLTLNKLTVDKILIEV--VFGNGVDKDMVI 364
+EE+A + LC+D K G T L V L+E +
Sbjct: 350 GLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKV---LVEKMGLPATKNGVSSKR 406
Query: 365 LTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMH 424
A + + N K A E + D+++ +
Sbjct: 407 RPALGCNSVWNDKF-----------KKLATLEFSR---------DRKSMSVLCKPSTGNK 446
Query: 425 RASKGAPEQILNLAWN-----------KADIEKKVHSVIDKFAER-GLRSLGVARQEVPA 472
KGAPE +L + ++ + SVI + LR L +A +++P
Sbjct: 447 LFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPD 506
Query: 473 GTK-DSPGGPWE---------FIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAI 522
+ D P FIG++ + DPPR + A+ I + G+ V MITGD
Sbjct: 507 PREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKET 566
Query: 523 GKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADG--------FAGVFPEHKF 574
+ RR+G+ P + + + G D++ F+ V P HK
Sbjct: 567 AEAICRRIGI---FSPDEDVTFK---SFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKS 620
Query: 575 EIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIIS 634
E+V+ LQ + IV MTGDGVNDAPALK ADIGIA+ T+ A+ ASD+VL + + I++
Sbjct: 621 ELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVA 680
Query: 635 AVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTSIWEFD--FPPFMVLIIAILNDGTIM 692
AV RAI+ MK + Y +S I V+ + LT+ P +L + ++ DG
Sbjct: 681 AVEEGRAIYNNMKQFIRYMISSNIGEVVC-IFLTAALGIPEGLIPVQLLWVNLVTDGLPA 739
Query: 693 TI------SKDRV-KPSPSPDS-----WKLREIFATGVVIGSYLALTTVIFF--WAIFET 738
T KD + KP PD W +F +V+G Y+ L TV F W +
Sbjct: 740 TALGFNPPDKDIMWKPPRRPDEPLITGW----LFFRYLVVGVYVGLATVGGFVWWYLLTH 795
Query: 739 DFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQV 774
+ + + Q A + L V
Sbjct: 796 FTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSV 831
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 151 bits (383), Expect = 3e-37
Identities = 163/697 (23%), Positives = 260/697 (37%), Gaps = 170/697 (24%)
Query: 138 VLRDGKWSEEDASVLVPGDIISIKL--GDIIPADARLLEGDPLKIDQSALTGESLPVTK- 194
V+R+GKW + LVPGDI+SI +P D+ LL G + +++S LTGES+PV K
Sbjct: 233 VIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGSCI-VNESMLTGESVPVLKF 291
Query: 195 ---NPGDG---VYSGSTCK------------------QGEIEAVVIATGVHTFFGKAAHL 230
+ GD ++ T K A+V+ TG T G+ L
Sbjct: 292 PIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQ---L 348
Query: 231 VESTTH----VGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILI 286
V S + V F + F IG I II + ++ + +L +I I
Sbjct: 349 VRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKDGRPLGKIILRSLDIITI 408
Query: 287 GGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV- 345
+P A+P LS+ + RL ++G I +DV C DKTGTLT + L +
Sbjct: 409 -VVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLR 467
Query: 346 -----------DKILIEVVFGNGVDKDMVILTAARASRLENQ---DAIDAAI-------- 383
KI+ E + T ++LE + D +D +
Sbjct: 468 GVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTL 527
Query: 384 ---------------VSMLADPKEARAEITEVHFLPFNPTDKRTA-LTYTDKNGKMHRAS 427
V P+ E++ + F+ +R + + T+
Sbjct: 528 EEDDESAEPTSILAVVRTDDPPQ----ELSIIRRFQFSSALQRMSVIVSTNDERSPDAFV 583
Query: 428 KGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGT--------KDSPG 479
KGAPE I +L + + V+ + G R L +A +E+P T +D+
Sbjct: 584 KGAPETIQSLC-SPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVE 642
Query: 480 GPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGM--GTNMY 537
F+G + +P + D+ E I+ + MITGD R G+ +N
Sbjct: 643 SNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTL 702
Query: 538 -----------------------PSSALLGEKKDTIVG-LPVDDLIEKADGFA------G 567
A + +G V+DL+ A
Sbjct: 703 ILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFA 762
Query: 568 VFPEHKFEIVKR----------------------LQARKHIVGMTGDGVNDAPALKVADI 605
V H E++ R LQ + VGM GDG ND ALK AD+
Sbjct: 763 VLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADV 822
Query: 606 GIAVADSTDAARSA---SDIVLTEPGLSVII---SAVLTSRAIFQRMKNYT-IYAVSITI 658
GI+++++ +A+ +A S + +VI A++TS +F+ M Y+ I S++I
Sbjct: 823 GISLSEA-EASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI 881
Query: 659 RIVLGFLLLTSIWEFDFPPFMVLIIAILNDGTIMTIS 695
+ LI + L DG +TI
Sbjct: 882 --------------------LYLIGSNLGDGQFLTID 898
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 144 bits (365), Expect = 3e-35
Identities = 84/271 (30%), Positives = 139/271 (51%), Gaps = 23/271 (8%)
Query: 103 ILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKL 162
IL +L+ N+ + +E NA A AL + AKVLRDG+WS A LVPGDI+ + +
Sbjct: 42 ILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRDGRWSVIKAKDLVPGDIVELAV 101
Query: 163 GDIIPADARLLEGDPLKIDQSALTGESLPVTKN----PGDG---------VYSGSTCKQG 209
GD +PAD R+L L++DQS LTGES+ V K+ P + ++SG+ G
Sbjct: 102 GDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAG 161
Query: 210 EIEAVVIATGVHTFFGK-AAHLVESTTHVGHFQQVLTSIGNFC------ICSIAIGMIIE 262
+ VV+ TG+ T GK + + Q+ L G IC + + I
Sbjct: 162 KARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIG 221
Query: 263 IIIIYGHQERGYRVGIDNLLV---ILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMT 319
+ I + + + IP +P V++ +A+G+ +++++ AI +++
Sbjct: 222 HFNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLP 281
Query: 320 AIEEMAGMDVLCSDKTGTLTLNKLTVDKILI 350
++E + V+CSDKTGTLT N+++V K++
Sbjct: 282 SVETLGCTTVICSDKTGTLTTNQMSVCKVVA 312
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 139 bits (353), Expect = 5e-34
Identities = 135/518 (26%), Positives = 214/518 (41%), Gaps = 82/518 (15%)
Query: 125 AAAL-MARLAPKAKVLR-DGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQ 182
A +L + A++LR DG A+ L GDI+ ++ G+IIP+D ++EG +D+
Sbjct: 94 ADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDE 152
Query: 183 SALTGESLPVTKNPG---DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGH 239
SA+TGES PV + G V G+ ++ + A TF + LVE
Sbjct: 153 SAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAER--- 209
Query: 240 FQQVLTSIGNFCICSIAIGMIIEIIII----YGHQERGYRVGIDNLLVILIGGIPIAMPT 295
Q+ I I + +I + + + G + L+ +L+ IP +
Sbjct: 210 -QKTPNEIALT-ILLSGLTLIFLLAVATLYPFAIYSGGGAASVTVLVALLVCLIPTTIGG 267
Query: 296 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDKILIEVVF 354
+LS G R++Q I A+E +D L DKTGT+TL N+ + I +
Sbjct: 268 LLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPV---- 323
Query: 355 GNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVH----FLPFNPTDK 410
GV ++ + A AS L ++ +IV LA ++ F+PF
Sbjct: 324 -PGVSEEELADAAQLAS-LADETPEGRSIVE-LAKKLGIELREDDLQSHAEFVPFT---A 377
Query: 411 RTALTYTDKNGKMHRASKGAPEQILNLA-WNKADIEKKVHSVIDKFAERGLRSLGVARQE 469
+T ++ D G KGA + I I + + + +D+ + G L V
Sbjct: 378 QTRMSGVDLPGG-REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENG 436
Query: 470 VPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQ----LAIGKE 525
+G++ L D + E +G+ MITGD AI E
Sbjct: 437 -------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE 483
Query: 526 TGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKH 585
G VDD I +A PE K ++++ QA
Sbjct: 484 AG---------------------------VDDFIAEAT------PEDKLALIRQEQAEGR 510
Query: 586 IVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIV 623
+V MTGDG NDAPAL AD+G+A+ T AA+ A+++V
Sbjct: 511 LVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 139 bits (352), Expect = 1e-33
Identities = 108/372 (29%), Positives = 167/372 (44%), Gaps = 68/372 (18%)
Query: 34 SDGLSSDEVQSRLEVFGHNKLEEKKENKILKFLGFMWNPLSWVMEAAALMAITLARGGGK 93
+GL+ DE Q RL+ G N+LE L L V A M + L
Sbjct: 24 PEGLTHDEAQHRLKEVGENRLEADSGIDAKAML------LHQVCNA---MCMVLIIAAAI 74
Query: 94 DVDYHDFVG---ILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDAS 150
HD++ I A++ +N I FI+E A +L +P A V+R+GK D+
Sbjct: 75 SFAMHDWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSH 134
Query: 151 VLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNP------------GD 198
LVPGDI +K GD IPAD RL+E D++ LTGESLPV K+ GD
Sbjct: 135 DLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGD 194
Query: 199 GV---YSGSTCKQGEIEAVVIATGVHTFFGKAA--------------------------- 228
+ +S S +G + + IAT +++ G A
Sbjct: 195 RINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKW 254
Query: 229 HLVESTTHVGHF---------QQVLTSIGNFCICSIAIGMIIEIIIIYGHQ-ERGYRVGI 278
L + G F + L+ + C I +I II++ H+ + V I
Sbjct: 255 ILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFC---IAIIFAIIVMAAHKFDVDKEVAI 311
Query: 279 DNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTL 338
+ + I IP ++ VLS+TMA+G+ +S++ I +++ A+E + ++ +CSDKTGT+
Sbjct: 312 -YAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTI 370
Query: 339 TLNKLTVDKILI 350
T K+ +I I
Sbjct: 371 TQGKMIARQIWI 382
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 133 bits (336), Expect = 4e-32
Identities = 145/577 (25%), Positives = 234/577 (40%), Gaps = 81/577 (14%)
Query: 69 MWNPLSWVMEAAALMAITL----ARGGGKDVDYHDFVGILA------LLIINSTISFIEE 118
NP+ +++ +L+ + A G + F I+ +L N + E
Sbjct: 30 WRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEG 89
Query: 119 NNAGNAAAALMARLAPKAKVLR-DGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDP 177
A + + AK+LR DG + A L GDI+ ++ GD+IP D ++EG
Sbjct: 90 RGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA 149
Query: 178 LKIDQSALTGESLPVTKNPGD---GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST 234
+D+SA+TGES PV K G V G+ + A TF + LVE
Sbjct: 150 -SVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGA 208
Query: 235 THVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQE-RGYRVGIDNLLVILIGGIPIAM 293
++ +I + ++ + ++ ++ G + + L+ +L+ IP +
Sbjct: 209 QRRKTPNEIALTI---LLIALTLVFLLVTATLWPFAAYGGNAISVTVLVALLVCLIPTTI 265
Query: 294 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDKILIEV 352
+LS G R+ I A+E +D L DKTGT+TL N+L + I
Sbjct: 266 GGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPA-- 323
Query: 353 VFGNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRT 412
GVD+ + A AS + D + + +LA R + + F +T
Sbjct: 324 ---QGVDEKTLADAAQLASLAD--DTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQT 378
Query: 413 ALTYTD-KNGKMHRASKGAPEQILN-LAWNKADIEKKVHSVIDKFAERGLRSLGVARQEV 470
++ + NG+M R KGA + I + N I + +D+ A +G L V
Sbjct: 379 RMSGINLDNGRMIR--KGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCEDN- 435
Query: 471 PAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQ----LAIGKET 526
G++ L D + E + +G+ MITGD AI E
Sbjct: 436 ------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEA 483
Query: 527 GRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHI 586
G VDD I +A PE K ++++ QA +
Sbjct: 484 G---------------------------VDDFIAEAT------PEDKIALIRQEQAEGKL 510
Query: 587 VGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIV 623
V MTGDG NDAPAL AD+G+A+ T AA+ A+++V
Sbjct: 511 VAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 547
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 131 bits (330), Expect = 2e-31
Identities = 130/610 (21%), Positives = 247/610 (40%), Gaps = 92/610 (15%)
Query: 71 NPLSWVMEAAALMAITLARGGGKDVDYHD----------FVGILALLIINSTISFIEENN 120
NP+ +V+E L+A+ L + +L L+ N + + E
Sbjct: 32 NPIMFVVEVGMLLALGLTIYPDL-FHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRG 90
Query: 121 AGNAAAALMARLAPKAKVLR-DGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLK 179
A A + KA+ ++ DG + DAS L G I+ + G+ IP D ++++G
Sbjct: 91 KAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LAT 149
Query: 180 IDQSALTGESLPVTKNPG---DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTH 236
+D+SA+TGES PV K G D V G++ +E + + H+F K LVE T
Sbjct: 150 VDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATR 209
Query: 237 VGHFQQV--LTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMP 294
++ T + I + + + + + + + + + I L+ + + IP +
Sbjct: 210 KKTPNEIALFTLLMTLTIIFLVVILTMYPLAKFLN----FNLSIAMLIALAVCLIPTTIG 265
Query: 295 TVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVF 354
+LS G R++Q + K ++E ++VL DKTGT+T +
Sbjct: 266 GLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTIT--------------Y 311
Query: 355 GNGVDKDMVILTAARASRLEN--------QDAIDAAIVSMLADPKEARAEITEVHFLPFN 406
GN + + + ++ RL D + + LA + ++PF
Sbjct: 312 GNRMADAFIPVKSSSFERLVKAAYESSIADDTPEGRSIVKLAYKQHIDLPQEVGEYIPFT 371
Query: 407 PTDKRTALTYTDKNGKMHRASKGAPEQILN-LAWNKADIEKKVHSVIDKFAERGLRSLGV 465
+ + + +T + KGAP ++ + I + +++ +++G L V
Sbjct: 372 AETRMSGVKFTTR-----EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVV 426
Query: 466 ARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKE 525
+G++ L D + E R ++G+ M TGD
Sbjct: 427 LEDNE-------------ILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAAT 473
Query: 526 TGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKH 585
+ G VD + + PE K +++ QA+ H
Sbjct: 474 IAKEAG-----------------------VDRFVAECK------PEDKINVIREEQAKGH 504
Query: 586 IVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQR 645
IV MTGDG NDAPAL A++G+A+ T +A+ A++++ + + ++ VL + +
Sbjct: 505 IVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMT 564
Query: 646 MKNYTIYAVS 655
+ T ++++
Sbjct: 565 RGSLTTFSIA 574
|
Length = 673 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 125 bits (314), Expect = 4e-29
Identities = 104/397 (26%), Positives = 180/397 (45%), Gaps = 53/397 (13%)
Query: 389 DPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRA-SKGAPEQILNL--AWNKADIE 445
+ K A+ + PF+ KR A Y D +G+ + +KGA E+I+ + N D
Sbjct: 517 NEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGV 576
Query: 446 KK----------VHSVIDKFAERGLRSLGVARQEVPAG------------TKDSPGGPWE 483
K + + ++ A GLR L A + + + E
Sbjct: 577 KISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLE 636
Query: 484 FIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLG-MGTNMYPSS-- 540
F+GL+ ++DPPR++SA + + G++V M+TGD K + +G + N
Sbjct: 637 FLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDE 696
Query: 541 -----ALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVN 595
+ G + D + VDDL A P+ K ++++ L RK MTGDGVN
Sbjct: 697 IMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVN 756
Query: 596 DAPALKVADIGIAVA-DSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA- 653
D+P+LK+A++GIA+ + +D A+ ASDIVL++ + I++A+ R +F + + ++
Sbjct: 757 DSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLL 816
Query: 654 ---VSITIRIVLGFLLLTSIWEFDFP--PFMVL-IIAILNDGTIMTISKDRVKPS----P 703
V+ I +++G + FP P +L I I + M + ++ P
Sbjct: 817 AENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRL 876
Query: 704 SPDS------WKL-REIFATGVVIG-SYLALTTVIFF 732
D+ +L ++FA G +G S LA T I +
Sbjct: 877 PHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILY 913
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 123 bits (312), Expect = 6e-29
Identities = 141/533 (26%), Positives = 219/533 (41%), Gaps = 101/533 (18%)
Query: 127 ALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALT 186
ALMA + A LRDG+ E + L PGD+I + G +PAD +LL D+SALT
Sbjct: 236 ALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESALT 294
Query: 187 GESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTH--------VG 238
GES+PV + G+ V +G+T + V++ + + HL+E +
Sbjct: 295 GESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFID 354
Query: 239 HFQQVLTSIGNFCICSIAIGMIIEIIIIYGH--QERGYRVGIDNLLVILIGGIPIAMPTV 296
F ++ T I +A+ +I+ +++ QE YR L ++LI G P A+ V
Sbjct: 355 RFSRIYTPA----IMLVALLVILVPPLLFAAPWQEWIYR----GLTLLLI-GCPCAL--V 403
Query: 297 LSVTMAIGS--HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVF 354
+S AI S +++GA+ K A+E++ + + DKTGTLT K V ++
Sbjct: 404 ISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQV----TDIHP 459
Query: 355 GNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTAL 414
G+ + ++ AA A++ LA A++ L + + AL
Sbjct: 460 ATGISESELLALAA---------AVEQGSTHPLAQAIVREAQVRG---LAIPEAESQRAL 507
Query: 415 TYT----DKNGKMHRASKGAPEQI--LNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQ 468
+ NG+ AP ++ L A+ I++ G + V R
Sbjct: 508 AGSGIEGQVNGERVLIC--APGKLPPLADAFAGQ---------INELESAGKTVVLVLRN 556
Query: 469 EVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGR 528
+ GL+ L D R D+ + I LG+ M+TGD
Sbjct: 557 DDVL-------------GLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAG 603
Query: 529 RLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVG 588
LG+ D AG+ PE K + V L +
Sbjct: 604 ELGI------------------------------DFRAGLLPEDKVKAVTELNQ-HAPLA 632
Query: 589 MTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRA 641
M GDG+NDAPA+K A IGIA+ TD A +D LT L + + SRA
Sbjct: 633 MVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRA 685
|
Length = 741 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 122 bits (310), Expect = 9e-29
Identities = 142/532 (26%), Positives = 222/532 (41%), Gaps = 112/532 (21%)
Query: 125 AAAL-MARLAPKAKVLRDGKWSEE-DASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQ 182
A +L A+ A+ LR+ +EE A+ L GDI+ ++ G+IIPAD ++EG +D+
Sbjct: 94 ADSLRGAKKDTFARKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDE 152
Query: 183 SALTGESLPVTKNPGD---GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGH 239
SA+TGES PV + G V G+ I + A +F + LVE
Sbjct: 153 SAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKR--- 209
Query: 240 FQQVLTSIG-NFCICSIAIGMIIEIIIIYGHQE-RGYRVGIDNLLVILIGGIPIAMPTVL 297
Q+ I + + I ++ + + G + I L+ +L+ IP + +L
Sbjct: 210 -QKTPNEIALTILLAGLTIIFLLVVATLPPFAAYSGGALSITVLVALLVCLIPTTIGGLL 268
Query: 298 SVTMAIG---SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDKILIEVV 353
S AIG R+ Q I A+E +D L DKTGT+TL N+ + + V
Sbjct: 269 S---AIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE--FLPV- 322
Query: 354 FGNGVDKDMVILTAARASRLENQDAIDAAIVSMLADP-----------------KEARAE 396
GV + ++ DAA +S LAD +E +
Sbjct: 323 --PGVTE---------------EELADAAQLSSLADETPEGRSIVVLAKQRFNLRERDLQ 365
Query: 397 ITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILN-LAWNKADIEKKVHSVIDKF 455
F+PF+ +T ++ D +G+ R KGA + I + N ++ + +D+
Sbjct: 366 SLHATFVPFS---AQTRMSGVDLDGREIR--KGAVDAIRRYVESNGGHFPAELDAAVDEV 420
Query: 456 AERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMI 515
A +G L VA +G++ L D + E +G+ MI
Sbjct: 421 ARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMI 467
Query: 516 TGD-QL---AIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571
TGD L AI E G VDD + +A PE
Sbjct: 468 TGDNPLTAAAIAAEAG---------------------------VDDFLAEAT------PE 494
Query: 572 HKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIV 623
K ++++ QA +V MTGDG NDAPAL AD+G+A+ T AA+ A ++V
Sbjct: 495 DKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMV 546
|
Length = 679 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 1e-26
Identities = 75/251 (29%), Positives = 118/251 (47%), Gaps = 11/251 (4%)
Query: 104 LALLIINSTISFIEENNAGNAAAALMA--RLAP-KAKVLRDGKWSEEDASVLVPGDIISI 160
LL++ S +EE +G A AL A LAP A+VLR G E L GD++ +
Sbjct: 22 ALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVV 81
Query: 161 KLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGV 220
K G+ +P D +L G +D+SALTGES+PV K PGD V++G+ G + VV
Sbjct: 82 KPGERVPVDGVVLSGTST-VDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPA 140
Query: 221 HTFFGKAAHLV-ESTTHVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGID 279
+ K +LV E+ + Q+ + + + I I + + + +
Sbjct: 141 DSTIAKIVNLVEEAQSRKAKTQRFIDRFAR--YYTPVVLAIALAIWLVPGLLKRWPFWVY 198
Query: 280 NLLVILIGGIPIAMPTVLSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 337
LV+L+ P A+ V+S A ++ G + K A+E +A + + DKTGT
Sbjct: 199 RALVLLVVASPCAL--VISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGT 256
Query: 338 LTLNKLTVDKI 348
LT + V +
Sbjct: 257 LTTGRPKVVDV 267
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 98.2 bits (245), Expect = 4e-21
Identities = 66/208 (31%), Positives = 98/208 (47%), Gaps = 32/208 (15%)
Query: 483 EFIGLLPLFDPPRHDSAETIRRALDLGVS-VKMITGDQLAIGKETGRRLGMGTNMYPSSA 541
++G + L D PR D+AE I LG+ V M+TGD+ A+ + R LG
Sbjct: 352 TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELG---------- 401
Query: 542 LLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALK 601
+D++ A + PE K EIVK L+ + V M GDG+NDAPAL
Sbjct: 402 -------------IDEV------HAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALA 442
Query: 602 VADIGIAV-ADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK-NYTIYAVSITIR 659
AD+GIA+ A +D A +D+VL LS + A+ +R + +K N I I +
Sbjct: 443 AADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLL 502
Query: 660 IVLGFLLLTSIWEFDFPPFMVLIIAILN 687
I+L + +W ++ ILN
Sbjct: 503 ILLALFGVLPLWLAVLGHEGSTVLVILN 530
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 88.3 bits (219), Expect = 1e-17
Identities = 57/167 (34%), Positives = 77/167 (46%), Gaps = 37/167 (22%)
Query: 485 IGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQL----AIGKETGRRLGMGTNMYPSS 540
LL + DP R DS ++R G + M+TGD AI KE G
Sbjct: 642 AALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAG------------- 688
Query: 541 ALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPAL 600
+D++I AGV P+ K E +KRLQ++ V M GDG+NDAPAL
Sbjct: 689 --------------IDEVI------AGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPAL 728
Query: 601 KVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
AD+GIA+ +D A + I L L + A+ SRA + MK
Sbjct: 729 AQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMK 775
|
Length = 834 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 71.8 bits (177), Expect = 1e-15
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 15 AVDLENIPIEEVFENLKCT-SDGLSSDEVQSRLEVFGHNKLEE-KKENKILKFLGFMWNP 72
+D + +EEV E L+ GLSS+E RLE +G N+L KK + +L+FL NP
Sbjct: 1 ELDWHALSLEEVLERLQTDLEKGLSSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNP 60
Query: 73 LSWVMEAAALMAITL 87
L +++ AAA+++ L
Sbjct: 61 LIYILLAAAVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 64.5 bits (158), Expect = 4e-13
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 20 NIPIEEVFENLKCTS-DGLSSDEVQSRLEVFGHNKL-EEKKENKILKFLGFMWNPLSWVM 77
+ +EEV L GL+ E + RLE +G N+L E+K ++ FL +PL ++
Sbjct: 3 TLSVEEVLARLGTDLEKGLTEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVIIL 62
Query: 78 EAAALMA 84
AA+++
Sbjct: 63 LIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 7e-11
Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 21/244 (8%)
Query: 134 PKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVT 193
P A+V+ D + + PG ++ + GD +P D + +G+ +D++ LTGE +P
Sbjct: 323 PTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEAW-LDEAMLTGEPIPQQ 381
Query: 194 KNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVE----STTHVGHFQQVLTSIGN 249
K GD V++G+ + G + A G HT + +V S +G ++++
Sbjct: 382 KGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAV-- 439
Query: 250 FCICSIAIGMIIEII-IIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVT--MAI--G 304
F + I ++ I +G + I LVI + IA P L + M+I G
Sbjct: 440 FVPVVVVIALVSAAIWYFFGPAPQ-----IVYTLVIATTVLIIACPCALGLATPMSIISG 494
Query: 305 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVI 364
R ++ G + + A++ + +D L DKTGTLT K V + V NGVD+ +
Sbjct: 495 VGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQV----VAVKTFNGVDEAQAL 550
Query: 365 LTAA 368
AA
Sbjct: 551 RLAA 554
|
Length = 834 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 53.0 bits (127), Expect = 9e-08
Identities = 31/122 (25%), Positives = 48/122 (39%), Gaps = 18/122 (14%)
Query: 483 EFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 542
+GL+ L DP + E ++ + G+ + ++TGD R LG+ + +
Sbjct: 84 VVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDALVSADLY 143
Query: 543 LGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKV 602
VG P + E A ++ L + V M GDGVND PA K
Sbjct: 144 ----GLVGVGKPDPKIFELA--------------LEELGVKPEEVLMVGDGVNDIPAAKA 185
Query: 603 AD 604
A
Sbjct: 186 AG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 51.0 bits (122), Expect = 2e-07
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 544 GEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVA 603
G++K ++V L I FAG PE K +I++ L+ R V M G+G ND AL+ A
Sbjct: 53 GDRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREA 112
Query: 604 DIGIAVADSTDA---ARSASDIVLTEPGLSVIISA 635
D+GI +D+VL E + +
Sbjct: 113 DLGICTIQQEGVPERLLLTADVVLKEIAEILDLLK 147
|
Length = 152 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 2e-04
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 377 DAIDAAIV----SMLADPKEARAEITEVHFLPFNPTDKR-TALTYTDKNGKMHRASKGAP 431
D ++A++ + D +E RA V +PFN KR + + + + KGAP
Sbjct: 22 DPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAP 81
Query: 432 EQILNL 437
E+IL
Sbjct: 82 ERILER 87
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 5e-04
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 591 GDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEP 627
GD ND +VA G+AVA++ + + A+D V +
Sbjct: 180 GDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKS 216
|
Length = 230 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 959 | |||
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.93 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.61 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.37 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.22 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.07 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.06 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.98 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.87 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.85 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 98.72 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.65 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.65 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.61 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.58 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.57 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.56 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.54 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.54 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.52 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.47 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.44 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.43 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.42 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.41 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.34 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.3 | |
| PLN02887 | 580 | hydrolase family protein | 98.3 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.28 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.25 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.23 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.22 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.19 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.18 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.06 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.03 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.02 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.98 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.96 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.93 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.93 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.91 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.76 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.74 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.7 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.47 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.41 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.31 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.3 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.27 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.14 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.05 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.0 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.0 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.99 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.97 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 96.95 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.77 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.76 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.72 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.71 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.7 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.63 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.55 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.54 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 96.38 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.37 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.34 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 96.23 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.21 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.17 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.12 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.11 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.07 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.06 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 95.99 | |
| PRK06769 | 173 | hypothetical protein; Validated | 95.82 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 95.81 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.72 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.65 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.59 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 95.42 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.37 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.37 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.33 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.26 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 95.22 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 95.09 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 94.81 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 94.71 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 94.69 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 94.61 | |
| PLN02940 | 382 | riboflavin kinase | 94.6 | |
| PLN02580 | 384 | trehalose-phosphatase | 94.49 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 94.22 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 94.2 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 93.78 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 93.76 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 93.61 | |
| PLN02811 | 220 | hydrolase | 93.52 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 93.26 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 92.9 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 92.84 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 92.72 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 92.58 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 92.42 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 92.23 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 92.21 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 91.75 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 91.71 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 91.36 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 91.06 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 90.59 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 90.48 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 90.0 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 89.44 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 89.31 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 88.39 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 88.14 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 88.11 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 87.83 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 87.8 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 87.22 | |
| PLN03017 | 366 | trehalose-phosphatase | 86.45 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 85.96 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 85.51 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 85.47 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 84.19 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 81.54 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 81.52 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 80.13 |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-199 Score=1634.55 Aligned_cols=941 Identities=78% Similarity=1.187 Sum_probs=917.7
Q ss_pred CchhhhhHHhhhhcccccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHH
Q 002151 1 MDKTAIALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKENKILKFLGFMWNPLSWVMEAA 80 (959)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~fl~~~~~~~~~~l~~a 80 (959)
|.+...+++++++|.+|.+..|++||+++|.|+++|||++|+++|+++||+|++++++++.+++|+.+||||++|+|++|
T Consensus 1 m~e~l~s~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaA 80 (942)
T KOG0205|consen 1 MIEELDSLEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAA 80 (942)
T ss_pred CcccccchhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHH
Confidence 34333458999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCCCcEEEE
Q 002151 81 ALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISI 160 (959)
Q Consensus 81 ails~~~~~~~~~~~~~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l 160 (959)
|++++.+.+++++|+||.||++|++++++|++++|+||++++++..+||+.++++++|+|||+|.++++++||||||+.+
T Consensus 81 AimA~~Lang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsi 160 (942)
T KOG0205|consen 81 AIMAIGLANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSI 160 (942)
T ss_pred HHHHHHHhcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCeeccceEEEecCceEEeccccCCCCceeecCCCCcccccceeeeCeEEEEEEEeccchhhhhhhhhhcccCCCCcH
Q 002151 161 KLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHF 240 (959)
Q Consensus 161 ~~Gd~VPaD~~ll~g~~l~Vdes~LTGES~pv~K~~g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~l 240 (959)
+.||+||||+||++|+.|+||||+|||||.||.|++||.+||||+|++|++.++|++||.+|++||.+++++++.+.+||
T Consensus 161 k~GdIiPaDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHF 240 (942)
T KOG0205|consen 161 KLGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240 (942)
T ss_pred ccCCEecCccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCceecchhH
Q 002151 241 QQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTA 320 (959)
Q Consensus 241 ~~~~~~i~~~~i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~ilvk~~~~ 320 (959)
|+.++.|+++|+|++++++++.+.++|+.+.+.++..+.++++++++.+|.|||++++++|++|++||+++|+++|+++|
T Consensus 241 qkVLt~IGn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtA 320 (942)
T KOG0205|consen 241 QKVLTGIGNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTA 320 (942)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCccEEeeCCCcceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhcccccCChHHHHHHHHhcCchhhhccceEe
Q 002151 321 IEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEV 400 (959)
Q Consensus 321 iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l 400 (959)
+|+|+.+|++|+|||||||.|+++|++..++ .+.++.+++++++.|+++++.+++|++|.|+++++.||++.+.+|+++
T Consensus 321 IEemAGmdVLCSDKTGTLTlNkLSvdknl~e-v~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikev 399 (942)
T KOG0205|consen 321 IEEMAGMDVLCSDKTGTLTLNKLSVDKNLIE-VFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEV 399 (942)
T ss_pred HHHhhCceEEeecCcCceeecceecCcCcce-eeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEE
Confidence 9999999999999999999999999996655 667799999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhccchhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCCCCCCC
Q 002151 401 HFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGG 480 (959)
Q Consensus 401 ~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~ 480 (959)
|+.||||..||.+.+|.+++|++++++|||||+|++.|+.+.++++++++.+++|+++|+|.|++|++..+++.++..+.
T Consensus 400 hF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~ 479 (942)
T KOG0205|consen 400 HFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGG 479 (942)
T ss_pred eeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCcc-ccccCCcchHHHH
Q 002151 481 PWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEK-KDTIVGLPVDDLI 559 (959)
Q Consensus 481 ~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~-~~~~~~~~~~~~i 559 (959)
+|+|+|+..+.||||+|+.++|++....|++|+|+|||+..++++++|++|+++|+||+..+.|.+ .+.+.+.+.++++
T Consensus 480 pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~eli 559 (942)
T KOG0205|consen 480 PWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELI 559 (942)
T ss_pred CcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999888854 6788899999999
Q ss_pred hhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHHH
Q 002151 560 EKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTS 639 (959)
Q Consensus 560 ~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~g 639 (959)
++++.||.++||||+++|+.||++||+|+|+|||+||+||||+||+|||+.++||+|+.+|||||++|++|.|+.++..+
T Consensus 560 e~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltS 639 (942)
T KOG0205|consen 560 EKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (942)
T ss_pred hhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccHHHHHHHHHHhhhhhcccccCCCCCCCCCCchhhHHHHHHHHH
Q 002151 640 RAIFQRMKNYTIYAVSITIRIVLGFLLLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVV 719 (959)
Q Consensus 640 R~~~~~i~~~~~~~l~~ni~~v~~~~~~~~~~~~~~~p~~il~i~~~~d~~~~~l~~d~~~~~~~p~~~~~~~~~~~~~~ 719 (959)
|.+|+||++|.+|+++.++.+++++++..++|.+.|+|++++++.++||++.|++++|+++|+|.|++|++.++|..+++
T Consensus 640 raIfqrmknytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvV 719 (942)
T KOG0205|consen 640 RAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVV 719 (942)
T ss_pred HHHHHHHhhheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcccChhHH
Q 002151 720 IGSYLALTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIFVTRSRGWSFTERPGLL 799 (959)
Q Consensus 720 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~~~~~ 799 (959)
+|.|+++++..+||..+.+.||+..||+....++ ..+..+.+|+++++++|+++|++|+++|+|.++|+++
T Consensus 720 lgtyma~~tvif~w~~~~t~ff~~~f~v~~~~~~---------~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~ 790 (942)
T KOG0205|consen 720 LGTYMAIMTVIFFWAAYTTDFFPRTFGVRSLFGN---------EHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWL 790 (942)
T ss_pred ehhHHHHHHHHHhhhhccccccccccceeeccCC---------HHHHHHhhhhhheehhceeeEEEeccCCccccCcHHH
Confidence 9999999999999999999999999999988777 7788899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhHhhccchhhHHhhhhhhhhhhcccc
Q 002151 800 LVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYNIIIYMLLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDF 879 (959)
Q Consensus 800 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 879 (959)
++.+++.++++++++++|++|.+.+..+++|+|..++|++++..++++++.|+..||..++++|.+.+++|+++++|+++
T Consensus 791 L~~af~~aqliatliavya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~~ 870 (942)
T KOG0205|consen 791 LLIAFFAAQLIATLIAVYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKDY 870 (942)
T ss_pred HHHHHHHHHHHHHHHHHHheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHhHhhhhhccccccccchhhccchhccccHHHHHHHHhhhHHHhhhhhcccchhhHhHhhcCCCccccCCCccC
Q 002151 880 GREAREAAWASEQRTLHGLQSMDAKIDKHAFKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVDHVNPHYTV 959 (959)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 959 (959)
|+++|+.+||.+||++||+|++ + .+|++++|+|++||||++||||+|||||||||++|+||+|++++ |||||
T Consensus 871 ~~~~~~a~~~~~qrt~~~lq~~----~---~~~~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~klk~~d~~~~-~~~t~ 942 (942)
T KOG0205|consen 871 GKEEREAQWALAQRTLHGLQPP----E---GRELSEIAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETI-QHYTV 942 (942)
T ss_pred chhhhhhHHHHhhhhhcccCCC----c---cchhhHHHHHHhhhhhhhhccchhhhhhhhHhhhhhcccchhhh-hhccC
Confidence 9999999999999999999999 3 28999999999999999999999999999999999999999999 99997
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-144 Score=1235.34 Aligned_cols=832 Identities=28% Similarity=0.408 Sum_probs=675.1
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhhCCCCC
Q 002151 17 DLENIPIEEVFENLKCT-SDGLSSDEVQSRLEVFGHNKLEEKK-ENKILKFLGFMWNPLSWVMEAAALMAITLARGGGKD 94 (959)
Q Consensus 17 ~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~fl~~~~~~~~~~l~~aails~~~~~~~~~~ 94 (959)
+.|..+.+|++..|+++ ++|||++|+.+|+++||+|+++... .+.|.++++||.||+..+|+++|++|+++.
T Consensus 3 ~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~------ 76 (972)
T KOG0202|consen 3 EAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA------ 76 (972)
T ss_pred chhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH------
Confidence 45778999999999999 6799999999999999999998654 788899999999999999999999999995
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCCCcEEEEeCCCeeccceEEEe
Q 002151 95 VDYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLE 174 (959)
Q Consensus 95 ~~~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~ 174 (959)
.|.+...|.+++++|++++++||||+++++++|+++.|+.++|+|+|+.+.++++||||||||.++-||+||||.||+|
T Consensus 77 -~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 -DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 7889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEEeccccCCCCceeecCC--------------CCcccccceeeeCeEEEEEEEeccchhhhhhhhhhccc-CCCCc
Q 002151 175 GDPLKIDQSALTGESLPVTKNP--------------GDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST-THVGH 239 (959)
Q Consensus 175 g~~l~Vdes~LTGES~pv~K~~--------------g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~ 239 (959)
..+|.||||.|||||.||.|+. .|++|+||.|..|+++|+|+.||.+|++|++.+.+++. ++++|
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9999999999999999999953 25799999999999999999999999999999999887 66999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--hHhc---c-c---cchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhh
Q 002151 240 FQQVLTSIGNFCICSIAIGMIIEIII--IYGH---Q-E---RGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQ 310 (959)
Q Consensus 240 l~~~~~~i~~~~i~~i~i~~~~~~~~--~~~~---~-~---~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k 310 (959)
+|+.++.++..+--.+.+.++..++. .|+. + + ..+...+..++++.+++||+|||+++++++++|.+||+|
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMak 315 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAK 315 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHh
Confidence 99999999987542222222222222 1111 1 1 344455667789999999999999999999999999999
Q ss_pred CCceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEee-----e-----cCCCC------------------CHH-
Q 002151 311 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEV-----V-----FGNGV------------------DKD- 361 (959)
Q Consensus 311 ~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~-----~-----~~~~~------------------~~~- 361 (959)
++++||++.++|+||.+++||+|||||||+|+|++.++++.+ . .+.++ +.+
T Consensus 316 knaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~ 395 (972)
T KOG0202|consen 316 KNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDL 395 (972)
T ss_pred hhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHH
Confidence 999999999999999999999999999999999999988632 0 00001 111
Q ss_pred --HHHHHHHHhccc------c-----cCChHHHHHHHHhc-----Cch---h-----------hhccceEeEeecCCCCC
Q 002151 362 --MVILTAARASRL------E-----NQDAIDAAIVSMLA-----DPK---E-----------ARAEITEVHFLPFNPTD 409 (959)
Q Consensus 362 --~~l~~aa~~~~~------~-----~~~~i~~ai~~~~~-----~~~---~-----------~~~~~~~l~~~pF~s~~ 409 (959)
.++..++.|+.. . .+.|.|.|+...+. +.. . ....++.+.++||++++
T Consensus 396 l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdr 475 (972)
T KOG0202|consen 396 LQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDR 475 (972)
T ss_pred HHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeeccccc
Confidence 233444444321 1 35688888765431 111 0 12223456899999999
Q ss_pred ceEEEEEEecCCe--EEEEEeCCHHHHHHhhcc------------chhHHHHHHHHHHHHHHccCeEEEEEEeecCC---
Q 002151 410 KRTALTYTDKNGK--MHRASKGAPEQILNLAWN------------KADIEKKVHSVIDKFAERGLRSLGVARQEVPA--- 472 (959)
Q Consensus 410 kr~sv~~~~~~g~--~~~~~KGa~e~il~~c~~------------~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~--- 472 (959)
|+|++.+.+..|+ ...|+|||+|.|+++|+. .+..++.+.+...+|+++|+|+||+|+++.+.
T Consensus 476 K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~ 555 (972)
T KOG0202|consen 476 KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVP 555 (972)
T ss_pred ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccCh
Confidence 9999999866554 688999999999999953 23467888999999999999999999997763
Q ss_pred --------CCCCCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCC--CCCccc
Q 002151 473 --------GTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNM--YPSSAL 542 (959)
Q Consensus 473 --------~~~~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~--~~~~~l 542 (959)
..+...|.+|+|+|++++.||||++++++|+.|+++||+|+|||||+.+||++|||++|+..+. ....++
T Consensus 556 ~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~ 635 (972)
T KOG0202|consen 556 DDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMAL 635 (972)
T ss_pred hhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcccccccc
Confidence 1245678999999999999999999999999999999999999999999999999999997543 356799
Q ss_pred cCccccccCCcchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEec-CchHHHHhhcc
Q 002151 543 LGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVA-DSTDAARSASD 621 (959)
Q Consensus 543 ~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~aAD 621 (959)
+|++.+.++++++++...+..+|+|++|+||.+||++||++|++|||||||+|||||||+|||||||| +|||+||+|||
T Consensus 636 TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsD 715 (972)
T KOG0202|consen 636 TGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASD 715 (972)
T ss_pred chhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccCCccHHHHHHHHHHhhhhh-cccccCCC
Q 002151 622 IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL-LTSIWEFDFPPFMVLIIAILNDGTI-MTISKDRV 699 (959)
Q Consensus 622 ivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~~~~~-~~~~~~~~~~p~~il~i~~~~d~~~-~~l~~d~~ 699 (959)
+||.||||++|+.||++||.+|+|||+|+.|.++.|++.+...++ ..+.++.++.|+|+||+|+++|++| ++++++++
T Consensus 716 MVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~ 795 (972)
T KOG0202|consen 716 MVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPV 795 (972)
T ss_pred cEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCC
Confidence 999999999999999999999999999999999999998766544 4556788999999999999999985 99999876
Q ss_pred C------CCCCCCchh-hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccC----CCCCC-Ccchh-HHHH
Q 002151 700 K------PSPSPDSWK-LREIFATGVVIGSYLALTTVIFFWAIFETDFFQNHFHVQSLRN----SGGKK-IPKVL-NGQL 766 (959)
Q Consensus 700 ~------~~~~p~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~-~~~~~-~~~~ 766 (959)
+ ||+.++... ...++.+++.+|+|+.+.++..|++-+... ......+.... ..++. .++.. ....
T Consensus 796 D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~--~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~ 873 (972)
T KOG0202|consen 796 DPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGA--DGKVTYRQLAHYNSCCRDFYGSRCAVFEDMC 873 (972)
T ss_pred ChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcC--CCCcChhhhcchhhhcccccccchhhhcccc
Confidence 3 444444333 356777888999999999887665544211 11101000000 00000 00000 0012
Q ss_pred HHHHHHHHHHHHHH-HhhhhhccCCCcccCh---hHHHHHHHHHHHHHHHHHHhhcc--ccccccCchhHHHHHHHHHHH
Q 002151 767 ASAVYLQVSTISQA-LIFVTRSRGWSFTERP---GLLLVTAFIIAQLVATLISALAT--SDFAGIHKIGWRWTSIIWLYN 840 (959)
Q Consensus 767 ~~~~~~~~~i~~~~-~i~~~rs~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 840 (959)
.+++.+.+.++... +.+++|+...+.+..| |.|+++++.++.+. .+..+|.+ -..++..+.+|.-|++++.++
T Consensus 874 ~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~-~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s 952 (972)
T KOG0202|consen 874 PLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVL-HFLVLYVPPLQRIFQTEPLSLAEWLLVLAIS 952 (972)
T ss_pred cceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHh-hheEEEechhhhhheecCCcHHHHHHHHHHh
Confidence 23444555555554 5678888877766543 66888887776444 33344433 223456777777778889999
Q ss_pred HHHHHHHHHHHHHhHhhc
Q 002151 841 IIIYMLLDPIKVAVGYAL 858 (959)
Q Consensus 841 ~~~~~~~~~~K~~~r~~~ 858 (959)
+..++++|++|++.|+++
T Consensus 953 ~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 953 SPVIIVDEILKFIARNYF 970 (972)
T ss_pred hhhhhHHHHHHHHHHhcc
Confidence 999999999999999765
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-134 Score=1238.23 Aligned_cols=750 Identities=60% Similarity=0.943 Sum_probs=662.7
Q ss_pred CCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHHHHHHHHH
Q 002151 36 GLSSDEVQSRLEVFGHNKLEEKKENKILKFLGFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISF 115 (959)
Q Consensus 36 GLs~~e~~~r~~~~G~N~i~~~~~~~~~~fl~~~~~~~~~~l~~aails~~~~~~~~~~~~~~~~~~I~~~l~i~~~~~~ 115 (959)
|||++||++|+++||+|++++++++.|..|+++|++|++|+|+++++++++++ +|.++++|++++++++.+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999888888999999999999999999999999983 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCCCcEEEEeCCCeeccceEEEecCceEEeccccCCCCceeecC
Q 002151 116 IEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKN 195 (959)
Q Consensus 116 ~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~l~Vdes~LTGES~pv~K~ 195 (959)
+||+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999997899999999999999999
Q ss_pred CCCcccccceeeeCeEEEEEEEeccchhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccch
Q 002151 196 PGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST-THVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGY 274 (959)
Q Consensus 196 ~g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~~~~~~~ 274 (959)
+||.+|+||.|.+|+++++|++||.+|.+|+|++++++. .+++|+|+.+++++++++..+++.+++.+++.+...+.+|
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 999999999999999999999999999999999999887 4678999999999988655444333333333333245678
Q ss_pred HHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeeec
Q 002151 275 RVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVF 354 (959)
Q Consensus 275 ~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~ 354 (959)
...+..++++++++|||+||++++++++.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++ ..
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~---~~ 310 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEIL---PF 310 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEE---ec
Confidence 888899999999999999999999999999999999999999999999999999999999999999999999976 33
Q ss_pred CCCCCHHHHHHHHHHhcccccCChHHHHHHHHhcCchhhhccceEeEeecCCCCCceEEEEEEecC-CeEEEEEeCCHHH
Q 002151 355 GNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKN-GKMHRASKGAPEQ 433 (959)
Q Consensus 355 ~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~-g~~~~~~KGa~e~ 433 (959)
.++.+.++++.+++.++...++||+|.|+++++.+....+..++.++++||++.+|+|++.+.+.+ |+.+.++||+||.
T Consensus 311 ~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~ 390 (755)
T TIGR01647 311 FNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQV 390 (755)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHH
Confidence 323667788888887765567899999999887655444566888999999999999999887653 7788899999999
Q ss_pred HHHhhccchhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCeEE
Q 002151 434 ILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVK 513 (959)
Q Consensus 434 il~~c~~~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~ 513 (959)
++++|.+..+.++++.+.+++++++|+|++++||++ .|++|+|+|+++|+||||||++++|++||++||+|+
T Consensus 391 il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~ 462 (755)
T TIGR01647 391 ILDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVK 462 (755)
T ss_pred HHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEE
Confidence 999998776777888889999999999999999973 367899999999999999999999999999999999
Q ss_pred EEcCCCcHHHHHHHHHhCCCCCCCC-CccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcC
Q 002151 514 MITGDQLAIGKETGRRLGMGTNMYP-SSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGD 592 (959)
Q Consensus 514 miTGD~~~tA~~ia~~lGi~~~~~~-~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GD 592 (959)
|+||||+.||.++|+++||.++.+. .....|++.+.++++++++.+++.++|||++||||+++|+.||++||+|+||||
T Consensus 463 miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGD 542 (755)
T TIGR01647 463 MVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGD 542 (755)
T ss_pred EECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcC
Confidence 9999999999999999999754322 234455556677888899999999999999999999999999999999999999
Q ss_pred CcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 002151 593 GVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTSIWE 672 (959)
Q Consensus 593 GvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~~~~~~~~~~~ 672 (959)
|+||+||||+||||||||+|+|+||++||+||++|||++|+.++++||++|+||+||+.|.++.|+.+++.+++..++++
T Consensus 543 GvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~ 622 (755)
T TIGR01647 543 GVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN 622 (755)
T ss_pred CcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998887777666677
Q ss_pred CCccHHHHHHHHHHhhhhhcccccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccC
Q 002151 673 FDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGSYLALTTVIFFWAIFETDFFQNHFHVQSLRN 752 (959)
Q Consensus 673 ~~~~p~~il~i~~~~d~~~~~l~~d~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 752 (959)
++++|+|++|+|+++|++.+++++|++.||++|++|++.+++..+++.|+++++.++++||+.+...++...++.. .
T Consensus 623 ~~l~~~~il~~~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 699 (755)
T TIGR01647 623 FYFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQ---L 699 (755)
T ss_pred cchhHHHHHHHHHHHhHhHhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhccccc---c
Confidence 8899999999999999989999999999999999999999999999999999999998887766322111111110 0
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHH-HHhhhhhccCCCcccChhHHHHHHHHHHHHHHHHHHh
Q 002151 753 SGGKKIPKVLNGQLASAVYLQVSTISQ-ALIFVTRSRGWSFTERPGLLLVTAFIIAQLVATLISA 816 (959)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~i~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 816 (959)
. ..+.++++|+. .+++| +++|++|+++.+|.++|++++++++++.+++.++++.
T Consensus 700 ~---------~~~~~t~~f~~-~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~ 754 (755)
T TIGR01647 700 L---------HGNLQSLIYLQ-VSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIAV 754 (755)
T ss_pred c---------HhhhHHHHHHH-HHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHHhh
Confidence 0 22344455544 45555 5789999999999999999999999988888877764
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-133 Score=1245.33 Aligned_cols=808 Identities=27% Similarity=0.431 Sum_probs=673.6
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccc-cHHHHHHHHHHhHHHHHHHHHHHHHHHHhhCCCCC
Q 002151 16 VDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKE-NKILKFLGFMWNPLSWVMEAAALMAITLARGGGKD 94 (959)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~-~~~~~fl~~~~~~~~~~l~~aails~~~~~~~~~~ 94 (959)
...+..+.+++++.|+++.+|||++||++|+++||+|+++.+++ +.|..|+++|++|++++|+++++++++.
T Consensus 47 ~~~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~------- 119 (902)
T PRK10517 47 LKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYAT------- 119 (902)
T ss_pred HHHHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH-------
Confidence 45678899999999999999999999999999999999998775 5778999999999999999999999987
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEC------CeEEEEecCCcCCCcEEEEeCCCeecc
Q 002151 95 VDYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRD------GKWSEEDASVLVPGDIISIKLGDIIPA 168 (959)
Q Consensus 95 ~~~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~Rd------G~~~~i~~~~Lv~GDiI~l~~Gd~VPa 168 (959)
++|.++++|++++++|.+++++||+++++++++|+++.+++++|+|| |++++|+++||||||+|.|++||+|||
T Consensus 120 ~~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPa 199 (902)
T PRK10517 120 EDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPA 199 (902)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEee
Confidence 38999999999999999999999999999999999999999999999 789999999999999999999999999
Q ss_pred ceEEEecCceEEeccccCCCCceeecCCCC-------------cccccceeeeCeEEEEEEEeccchhhhhhhhhhccc-
Q 002151 169 DARLLEGDPLKIDQSALTGESLPVTKNPGD-------------GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST- 234 (959)
Q Consensus 169 D~~ll~g~~l~Vdes~LTGES~pv~K~~g~-------------~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~- 234 (959)
||+|++|+++.||||+|||||.||.|.+|+ ++|+||.|.+|+++++|++||.+|.+|+|++++++.
T Consensus 200 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~ 279 (902)
T PRK10517 200 DLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQD 279 (902)
T ss_pred eEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccC
Confidence 999999998899999999999999999874 799999999999999999999999999999999876
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCce
Q 002151 235 THVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 314 (959)
Q Consensus 235 ~~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~il 314 (959)
.+++|+|+.+++++++++.+..+.+.+.++ .+.....+|...+...+++++++|||+||++++++++.|+++|+|+|++
T Consensus 280 ~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~-i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~il 358 (902)
T PRK10517 280 SEPNAFQQGISRVSWLLIRFMLVMAPVVLL-INGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVI 358 (902)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcE
Confidence 678999999999988754433332222222 2222345677888889999999999999999999999999999999999
Q ss_pred ecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhcccc--cCChHHHHHHHHhcCc--
Q 002151 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLE--NQDAIDAAIVSMLADP-- 390 (959)
Q Consensus 315 vk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~~--~~~~i~~ai~~~~~~~-- 390 (959)
||+++++|+||++|+||||||||||+|+|+|.++. .. .+.+.++++..++.++..+ .+||+|.|++..+...
T Consensus 359 Vk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~---~~-~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~ 434 (902)
T PRK10517 359 VKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHT---DI-SGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESA 434 (902)
T ss_pred EecchhhhhccCCCEEEecCCCccccceEEEEEEe---cC-CCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcch
Confidence 99999999999999999999999999999998853 11 2345566777766654432 4689999998876432
Q ss_pred hhhhccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhccc----------hhHHHHHHHHHHHHHHccC
Q 002151 391 KEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWNK----------ADIEKKVHSVIDKFAERGL 460 (959)
Q Consensus 391 ~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~----------~~~~~~~~~~i~~~a~~Gl 460 (959)
......++.++++||||.+|+|++++.+.++....++||+||.++++|... ++.++++.+..++++++|+
T Consensus 435 ~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~ 514 (902)
T PRK10517 435 RSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGL 514 (902)
T ss_pred hhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCC
Confidence 123456788999999999999999887767777899999999999999641 2345667788899999999
Q ss_pred eEEEEEEeecCCCCC---CCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCC
Q 002151 461 RSLGVARQEVPAGTK---DSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMY 537 (959)
Q Consensus 461 r~l~vA~~~~~~~~~---~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~ 537 (959)
|++++||++++..+. ...|++++|+|+++|+||||||++++|++|+++||+|+|+||||+.||.+||+++||.
T Consensus 515 rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~---- 590 (902)
T PRK10517 515 RVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD---- 590 (902)
T ss_pred EEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----
Confidence 999999998754321 1247799999999999999999999999999999999999999999999999999995
Q ss_pred CCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHH
Q 002151 538 PSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAAR 617 (959)
Q Consensus 538 ~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak 617 (959)
+..+++|.+++.++++++++.+++.+||||++|+||.++|+.||++|++|+|||||+||+||||+||||||||+|||+||
T Consensus 591 ~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAk 670 (902)
T PRK10517 591 AGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAR 670 (902)
T ss_pred ccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHH
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCccHHHHHHHHHHhhhhhccccc
Q 002151 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTSIWE-FDFPPFMVLIIAILNDGTIMTISK 696 (959)
Q Consensus 618 ~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~~~~~~~~~~~-~~~~p~~il~i~~~~d~~~~~l~~ 696 (959)
++||+||+||||++|++++++||++|+||+||+.|.++.|+..++.+++..++++ +|++|+|++|+|+++|++.+++++
T Consensus 671 eaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~ 750 (902)
T PRK10517 671 EAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPF 750 (902)
T ss_pred HhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcC
Confidence 9999999999999999999999999999999999999999999888777666666 599999999999999977899999
Q ss_pred CCCCCC--CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCcchhHHHHHHHHHHHH
Q 002151 697 DRVKPS--PSPDSWKLREIFATGVVIGSYLALTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQV 774 (959)
Q Consensus 697 d~~~~~--~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 774 (959)
|++.+. ++|.+|+...+...+++.|++.++++++.|++++.. ++... . .....+.+. +|..
T Consensus 751 d~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~~---~-------~~~~~~~~~-~F~~ 813 (902)
T PRK10517 751 DNVDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWV------FHANT---P-------ETQTLFQSG-WFVV 813 (902)
T ss_pred CCCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccccc---h-------hhHhHHHHH-HHHH
Confidence 998776 367778888888888899999888888777665421 11100 0 000112223 3666
Q ss_pred HHHHHH-HhhhhhccCCCcc-cChhHHHHHHHHHHHHHHHHHHhhccccccccCchh--HHHHHHHHHHHHHHHHHHHHH
Q 002151 775 STISQA-LIFVTRSRGWSFT-ERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIG--WRWTSIIWLYNIIIYMLLDPI 850 (959)
Q Consensus 775 ~i~~~~-~i~~~rs~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 850 (959)
.+++|. ++|++|+++.+++ +++.+++++..++.+++.+++++...-+++.+.+.+ +..|+++++++.. ++.++.
T Consensus 814 ~~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~ 891 (902)
T PRK10517 814 GLLSQTLIVHMIRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLV 891 (902)
T ss_pred HHHHHHHHHHhhccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHH
Confidence 677776 6899999874444 445555555545555555555521111233344444 3333443434333 557888
Q ss_pred HHHhHhhc
Q 002151 851 KVAVGYAL 858 (959)
Q Consensus 851 K~~~r~~~ 858 (959)
|..+.+.+
T Consensus 892 K~~~~~~~ 899 (902)
T PRK10517 892 KGFYSRRY 899 (902)
T ss_pred HHHHHHhh
Confidence 87655544
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-133 Score=1240.80 Aligned_cols=815 Identities=26% Similarity=0.415 Sum_probs=673.7
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhhC----
Q 002151 16 VDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKK-ENKILKFLGFMWNPLSWVMEAAALMAITLARG---- 90 (959)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~fl~~~~~~~~~~l~~aails~~~~~~---- 90 (959)
...|..+.+|+++.|+++.+|||++||++|+++||+|++++++ +++|+.|+++|++|+.|+|+++++++++++..
T Consensus 25 ~~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~ 104 (903)
T PRK15122 25 AREAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLR 104 (903)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3468889999999999999999999999999999999999766 56788999999999999999999999988531
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEC------CeEEEEecCCcCCCcEEEEeCCC
Q 002151 91 GGKDVDYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRD------GKWSEEDASVLVPGDIISIKLGD 164 (959)
Q Consensus 91 ~~~~~~~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~Rd------G~~~~i~~~~Lv~GDiI~l~~Gd 164 (959)
.+...+|.++++|++++++|++++++||++++++.++|+++.+++++|+|| |++++|+++||||||+|.|++||
T Consensus 105 ~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd 184 (903)
T PRK15122 105 RGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGD 184 (903)
T ss_pred CCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCC
Confidence 122357999999999999999999999999999999999999999999999 48999999999999999999999
Q ss_pred eeccceEEEecCceEEeccccCCCCceeecCC-----------------------CCcccccceeeeCeEEEEEEEeccc
Q 002151 165 IIPADARLLEGDPLKIDQSALTGESLPVTKNP-----------------------GDGVYSGSTCKQGEIEAVVIATGVH 221 (959)
Q Consensus 165 ~VPaD~~ll~g~~l~Vdes~LTGES~pv~K~~-----------------------g~~v~aGt~v~~G~~~~~V~~tG~~ 221 (959)
+|||||+|++|+++.||||+|||||.|+.|.+ +|++|+||.|.+|+++++|++||.+
T Consensus 185 ~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~ 264 (903)
T PRK15122 185 MIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSR 264 (903)
T ss_pred EEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccc
Confidence 99999999999988999999999999999975 3689999999999999999999999
Q ss_pred hhhhhhhhhhcccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHH
Q 002151 222 TFFGKAAHLVESTTHVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTM 301 (959)
Q Consensus 222 T~~gki~~l~~~~~~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l 301 (959)
|++|||++++++.+.++++|+.++++.+++..+..+++.+.++ .......+|...+..++++++++|||+||+++++++
T Consensus 265 T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~-~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~L 343 (903)
T PRK15122 265 TYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLL-INGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNL 343 (903)
T ss_pred cHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhh-hhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 9999999999886667899999999887643322222221111 112234567788888999999999999999999999
Q ss_pred HHHHHHhhhCCceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhccc--ccCChH
Q 002151 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRL--ENQDAI 379 (959)
Q Consensus 302 ~~~~~~l~k~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~--~~~~~i 379 (959)
+.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++ .. ++.+.++++.+++.++.. ..+||+
T Consensus 344 a~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~---~~-~~~~~~~~l~~a~l~s~~~~~~~~p~ 419 (903)
T PRK15122 344 AKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHL---DV-SGRKDERVLQLAWLNSFHQSGMKNLM 419 (903)
T ss_pred HHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEE---cC-CCCChHHHHHHHHHhCCCCCCCCChH
Confidence 999999999999999999999999999999999999999999999865 22 234455666666554332 246899
Q ss_pred HHHHHHHhcCch--hhhccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhcc----------chhHHHH
Q 002151 380 DAAIVSMLADPK--EARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWN----------KADIEKK 447 (959)
Q Consensus 380 ~~ai~~~~~~~~--~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~----------~~~~~~~ 447 (959)
|.|++.++.... .....++.++++||++.+|+|++++++.+|+++.++|||||.++++|.. +++.+++
T Consensus 420 e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~ 499 (903)
T PRK15122 420 DQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRER 499 (903)
T ss_pred HHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHH
Confidence 999998765322 1234578899999999999999998876788889999999999999963 1234566
Q ss_pred HHHHHHHHHHccCeEEEEEEeecCCCC-----CCCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHH
Q 002151 448 VHSVIDKFAERGLRSLGVARQEVPAGT-----KDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAI 522 (959)
Q Consensus 448 ~~~~i~~~a~~Glr~l~vA~~~~~~~~-----~~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~t 522 (959)
+.+.+++++++|+|++++||++++..+ .+..|++|+|+|+++|+||||||++++|++||++||+|+|+||||+.|
T Consensus 500 i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~t 579 (903)
T PRK15122 500 LLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIV 579 (903)
T ss_pred HHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 778889999999999999999876432 123578999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhc
Q 002151 523 GKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKV 602 (959)
Q Consensus 523 A~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~ 602 (959)
|.+||+++||.. ..+++|.+++.++++++.+.+++.+||||++||||+++|+.||++|++|+|||||+||+||||+
T Consensus 580 A~aIA~~lGI~~----~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ 655 (903)
T PRK15122 580 TAKICREVGLEP----GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRD 655 (903)
T ss_pred HHHHHHHcCCCC----CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHh
Confidence 999999999953 4689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEecCchHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCccHHHHH
Q 002151 603 ADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTSIWE-FDFPPFMVL 681 (959)
Q Consensus 603 AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~~~~~~~~~~~-~~~~p~~il 681 (959)
||||||||+|||+||++||+||+||||++|++++++||++|+||+||+.|.++.|+..++.+++..++.+ +|++|+|++
T Consensus 656 ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil 735 (903)
T PRK15122 656 ADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLL 735 (903)
T ss_pred CCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998877666555555 689999999
Q ss_pred HHHHHhhhhhcccccCCCCCC--CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCc
Q 002151 682 IIAILNDGTIMTISKDRVKPS--PSPDSWKLREIFATGVVIGSYLALTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIP 759 (959)
Q Consensus 682 ~i~~~~d~~~~~l~~d~~~~~--~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 759 (959)
|+|+++|++.+++++|++.+. ++|.+|+.+.+-..++.+|+..+++++..|++.+.. +. .+. .
T Consensus 736 ~~nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~--~~~-----~------ 800 (903)
T PRK15122 736 LQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFV--FA--ANS-----V------ 800 (903)
T ss_pred HHHHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--hc--cCc-----H------
Confidence 999999987899999987654 366666665544455567887777777666553311 00 010 0
Q ss_pred chhHHHHHHHHHHHHHHHHHH-HhhhhhccCCCcccC-hhHHHHHHHHHHHHHHHHHHh--hccccccccCchhHHHHHH
Q 002151 760 KVLNGQLASAVYLQVSTISQA-LIFVTRSRGWSFTER-PGLLLVTAFIIAQLVATLISA--LATSDFAGIHKIGWRWTSI 835 (959)
Q Consensus 760 ~~~~~~~~~~~~~~~~i~~~~-~i~~~rs~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 835 (959)
.....+ .+.+|...+++|. ++|++|+++.+++.+ +.++.+++.++.+++.+++++ ... ++.+.+.++..|++
T Consensus 801 -~~~~~~-~t~~f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~f~~~~l~~~~~~~ 876 (903)
T PRK15122 801 -EMQALF-QSGWFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPLGA--MVGLEPLPWSYFPW 876 (903)
T ss_pred -hhhhhh-HHHHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHHHH--HhCCCCCCHHHHHH
Confidence 000112 2344666677775 789999987554444 434444444455566666654 222 23455666666667
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhc
Q 002151 836 IWLYNIIIYMLLDPIKVAVGYAL 858 (959)
Q Consensus 836 ~~~~~~~~~~~~~~~K~~~r~~~ 858 (959)
++.++++++++.++.|.+.++.+
T Consensus 877 ~~~~~~~~~~~~e~~k~~~~r~~ 899 (903)
T PRK15122 877 LAATLLGYCLVAQGMKRFYIRRF 899 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhc
Confidence 77788888888889886655444
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-132 Score=1249.53 Aligned_cols=828 Identities=26% Similarity=0.361 Sum_probs=664.8
Q ss_pred cccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhhCC
Q 002151 14 EAVDLENIPIEEVFENLKCT-SDGLSSDEVQSRLEVFGHNKLEEKK-ENKILKFLGFMWNPLSWVMEAAALMAITLARGG 91 (959)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~fl~~~~~~~~~~l~~aails~~~~~~~ 91 (959)
|.-+||..+.+|+++.|+++ .+|||++||++|+++||+|++++++ ++.|..|++||++|+.++|+++++++++++
T Consensus 3 ~~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~--- 79 (1053)
T TIGR01523 3 EFNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH--- 79 (1053)
T ss_pred CCCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh---
Confidence 55689999999999999998 5899999999999999999998765 678889999999999999999999999983
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCCCcEEEEeCCCeeccceE
Q 002151 92 GKDVDYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADAR 171 (959)
Q Consensus 92 ~~~~~~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ 171 (959)
+|.++++|++++++|++++++||+++++++++|+++.+++++|+|||++++|+++||||||||.|++||+||||||
T Consensus 80 ----~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~r 155 (1053)
T TIGR01523 80 ----DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLR 155 (1053)
T ss_pred ----hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCceEEeccccCCCCceeecCCC---------------CcccccceeeeCeEEEEEEEeccchhhhhhhhhhcccC-
Q 002151 172 LLEGDPLKIDQSALTGESLPVTKNPG---------------DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTT- 235 (959)
Q Consensus 172 ll~g~~l~Vdes~LTGES~pv~K~~g---------------~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~- 235 (959)
|+++++|.||||+|||||.||.|.+. |++|+||.|.+|+++++|++||.+|++|||++++++..
T Consensus 156 Li~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~ 235 (1053)
T TIGR01523 156 LIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGG 235 (1053)
T ss_pred EEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhh
Confidence 99999999999999999999999642 57899999999999999999999999999999886431
Q ss_pred -----------------------------------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHH
Q 002151 236 -----------------------------------HVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDN 280 (959)
Q Consensus 236 -----------------------------------~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 280 (959)
.++|+|+.++++++++.+..++.+++.+++.+ . ..+...+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~--~-~~~~~~~~~ 312 (1053)
T TIGR01523 236 LFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK--F-DVDKEVAIY 312 (1053)
T ss_pred ccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh--h-hhhHHHHHH
Confidence 13899999999998754332222222221111 1 112355667
Q ss_pred HHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEee--ec---C
Q 002151 281 LLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEV--VF---G 355 (959)
Q Consensus 281 ~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~--~~---~ 355 (959)
.++++++++|++||+++++++++|++||+++|++||+++++|+||++++||+|||||||+|+|+|.++++.+ .+ +
T Consensus 313 av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~ 392 (1053)
T TIGR01523 313 AICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDN 392 (1053)
T ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecC
Confidence 789999999999999999999999999999999999999999999999999999999999999999987531 00 0
Q ss_pred --CCC---------------------------------------C---------HHHHHHHHHHhccc------------
Q 002151 356 --NGV---------------------------------------D---------KDMVILTAARASRL------------ 373 (959)
Q Consensus 356 --~~~---------------------------------------~---------~~~~l~~aa~~~~~------------ 373 (959)
.++ + ...++..++.|+..
T Consensus 393 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~ 472 (1053)
T TIGR01523 393 SDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK 472 (1053)
T ss_pred CCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee
Confidence 000 0 01245555555421
Q ss_pred ccCChHHHHHHHHhcCch----------hh-------------------hccceEeEeecCCCCCceEEEEEEecCC-eE
Q 002151 374 ENQDAIDAAIVSMLADPK----------EA-------------------RAEITEVHFLPFNPTDKRTALTYTDKNG-KM 423 (959)
Q Consensus 374 ~~~~~i~~ai~~~~~~~~----------~~-------------------~~~~~~l~~~pF~s~~kr~sv~~~~~~g-~~ 423 (959)
..+||+|.|++.++...+ +. +..+++++++||||++|||++++++.++ ++
T Consensus 473 ~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~ 552 (1053)
T TIGR01523 473 AHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETY 552 (1053)
T ss_pred eCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEE
Confidence 125999999987753111 11 2346789999999999999999986544 47
Q ss_pred EEEEeCCHHHHHHhhccc------------hhHHHHHHHHHHHHHHccCeEEEEEEeecCCCC------------CCCCC
Q 002151 424 HRASKGAPEQILNLAWNK------------ADIEKKVHSVIDKFAERGLRSLGVARQEVPAGT------------KDSPG 479 (959)
Q Consensus 424 ~~~~KGa~e~il~~c~~~------------~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~------------~~~~e 479 (959)
++++|||||.|+++|... ++.++++.+.+++|+++|+|||++||+.++..+ ++..|
T Consensus 553 ~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e 632 (1053)
T TIGR01523 553 NIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAE 632 (1053)
T ss_pred EEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhc
Confidence 889999999999999631 234677888899999999999999999886431 23457
Q ss_pred CCceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCC--------CCCccccCccccccC
Q 002151 480 GPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNM--------YPSSALLGEKKDTIV 551 (959)
Q Consensus 480 ~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~--------~~~~~l~g~~~~~~~ 551 (959)
++|+|+|+++++||||+|++++|++||++||+|+|+||||+.||.+||++|||..+. ....+++|.+++.++
T Consensus 633 ~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~ 712 (1053)
T TIGR01523 633 SDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALS 712 (1053)
T ss_pred cCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcC
Confidence 899999999999999999999999999999999999999999999999999996431 124689999999999
Q ss_pred CcchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEec-CchHHHHhhccccccCCCch
Q 002151 552 GLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVA-DSTDAARSASDIVLTEPGLS 630 (959)
Q Consensus 552 ~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~aADivL~~~~~~ 630 (959)
++++++.+++..||||++|+||.++|+.||++|++|+|||||+||+||||+|||||||| +|+|+|+++||++|++|||+
T Consensus 713 ~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~ 792 (1053)
T TIGR01523 713 DEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFA 792 (1053)
T ss_pred HHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------cCCccHHHHHHHHHHhhhh-hcccccCCCC---
Q 002151 631 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTSIW------EFDFPPFMVLIIAILNDGT-IMTISKDRVK--- 700 (959)
Q Consensus 631 ~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~~~~~~~~~~------~~~~~p~~il~i~~~~d~~-~~~l~~d~~~--- 700 (959)
+|+.++++||++|+||+|++.|.+++|+..++.++++.++. ++|++|+|++|+|+++|++ ++++++|++.
T Consensus 793 ~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~ 872 (1053)
T TIGR01523 793 SILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDL 872 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhH
Confidence 99999999999999999999999999999888776665542 3678899999999999976 5899988753
Q ss_pred ---CCCCCCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCcchhHHHHHHHHHHHHHH
Q 002151 701 ---PSPSPDS-WKLREIFATGVVIGSYLALTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVST 776 (959)
Q Consensus 701 ---~~~~p~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 776 (959)
||+.|+. ...++++..++++|+++++++++.|++.+.. +..+..+..+ .+. +...+. .....++++|...+
T Consensus 873 m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~-~~~~~~~~~~-~~~--~~~~~~-~~~~a~t~~f~~l~ 947 (1053)
T TIGR01523 873 MDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYG-FGSGNLGHDC-DAH--YHAGCN-DVFKARSAAFATMT 947 (1053)
T ss_pred HhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCccccccc-ccc--cccccc-chhhhHHHHHHHHH
Confidence 3333333 2234566678889999999888777654321 1000000000 000 000000 12234556666677
Q ss_pred HHHH-HhhhhhccCCCccc------------------ChhHHHHHHHHHHHHHH---HHHHhhccccccccCchhHHHHH
Q 002151 777 ISQA-LIFVTRSRGWSFTE------------------RPGLLLVTAFIIAQLVA---TLISALATSDFAGIHKIGWRWTS 834 (959)
Q Consensus 777 ~~~~-~i~~~rs~~~~~~~------------------~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 834 (959)
++|+ +.|.+|+++.+.+. ..|.|++++++++.++. .++|+.. ..++...+.+|.| +
T Consensus 948 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~-~~~f~~~~l~~~w-~ 1025 (1053)
T TIGR01523 948 FCALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVIN-DDVFKHKPIGAEW-G 1025 (1053)
T ss_pred HHHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhhh-hhhhccCCcchHH-H
Confidence 7786 68999997544321 13455665555443332 2233221 1244556666755 4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhc
Q 002151 835 IIWLYNIIIYMLLDPIKVAVGYAL 858 (959)
Q Consensus 835 ~~~~~~~~~~~~~~~~K~~~r~~~ 858 (959)
+++++++++++..+++|+++|++.
T Consensus 1026 ~~~~~~~~~~~~~e~~K~~~r~~~ 1049 (1053)
T TIGR01523 1026 LAAAATIAFFFGAEIWKCGKRRLF 1049 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 567888888899999999877654
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-133 Score=1245.85 Aligned_cols=774 Identities=32% Similarity=0.512 Sum_probs=652.1
Q ss_pred hcccccccCCHH--HHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Q 002151 13 KEAVDLENIPIE--EVFENLKCT-SDGLSSDEVQSRLEVFGHNKLEEKK-ENKILKFLGFMWNPLSWVMEAAALMAITLA 88 (959)
Q Consensus 13 ~~~~~~~~~~~~--~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~fl~~~~~~~~~~l~~aails~~~~ 88 (959)
.....||..+.+ ++...+.++ .+|||++|+.+|+++||+|++++++ .+.|..|+.+|++|+.++|+++++++++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~ 97 (917)
T COG0474 18 VTSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG 97 (917)
T ss_pred CCcccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 344568888888 999999887 6799999999999999999999655 688899999999999999999999999984
Q ss_pred hCCCCCCch----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCCCcEEEEeCCC
Q 002151 89 RGGGKDVDY----HDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGD 164 (959)
Q Consensus 89 ~~~~~~~~~----~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l~~Gd 164 (959)
.| .++..|++++++|++++++||+++++++++|+++.+++++|+|||++++|+++||||||||.+++||
T Consensus 98 -------~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd 170 (917)
T COG0474 98 -------DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGD 170 (917)
T ss_pred -------cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCC
Confidence 55 5667889999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccceEEEecCceEEeccccCCCCceeecCC--------------CCcccccceeeeCeEEEEEEEeccchhhhhhhhh
Q 002151 165 IIPADARLLEGDPLKIDQSALTGESLPVTKNP--------------GDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHL 230 (959)
Q Consensus 165 ~VPaD~~ll~g~~l~Vdes~LTGES~pv~K~~--------------g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l 230 (959)
+||||++|+++++++||||+|||||.|+.|.+ .|++|+||.+++|++.++|++||.+|++|+++.+
T Consensus 171 ~vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~ 250 (917)
T COG0474 171 VVPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARL 250 (917)
T ss_pred ccccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHh
Confidence 99999999999999999999999999999963 4789999999999999999999999999999999
Q ss_pred hccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhh
Q 002151 231 VEST-THVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLS 309 (959)
Q Consensus 231 ~~~~-~~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~ 309 (959)
+... ...+|+|+.+++++++++...++..++.++..+.....+|...+..+++++++++|++||+.+++++++|+++|+
T Consensus 251 ~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~ma 330 (917)
T COG0474 251 LPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMA 330 (917)
T ss_pred hccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH
Confidence 9988 789999999999998865443333333333332222333788899999999999999999999999999999999
Q ss_pred hCCceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeeecCCCCC---------HHHHHHHHHHhccc--c----
Q 002151 310 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVD---------KDMVILTAARASRL--E---- 374 (959)
Q Consensus 310 k~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~---------~~~~l~~aa~~~~~--~---- 374 (959)
++++++|+++++|+||++|+||||||||||+|+|+|.+++... -.++.+ ...++..++.|+.. .
T Consensus 331 k~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~ 409 (917)
T COG0474 331 KDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYING-GGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGW 409 (917)
T ss_pred hccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCC-CcccccccccccchHHHHHHHHHHhcCcccccccCc
Confidence 9999999999999999999999999999999999999988541 011122 11245556666632 2
Q ss_pred --cCChHHHHHHHHhcC------chhhhccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhcc------
Q 002151 375 --NQDAIDAAIVSMLAD------PKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWN------ 440 (959)
Q Consensus 375 --~~~~i~~ai~~~~~~------~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~------ 440 (959)
.+||.|.|++..+.+ ....+..+++++++||||+||||++++++.+|+++.++|||||.|+++|+.
T Consensus 410 ~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~ 489 (917)
T COG0474 410 YQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEP 489 (917)
T ss_pred eecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccc
Confidence 469999999988753 333455667899999999999999999977777999999999999999974
Q ss_pred -chhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCC----CCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEE
Q 002151 441 -KADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTK----DSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMI 515 (959)
Q Consensus 441 -~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~----~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~mi 515 (959)
.++.++.+.+..++|+++||||+++|||.++..+. +..|++|+|+|+++|+||||+|++++|+.|++|||+||||
T Consensus 490 ~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~Mi 569 (917)
T COG0474 490 LTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMI 569 (917)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEE
Confidence 34567889999999999999999999998765443 5789999999999999999999999999999999999999
Q ss_pred cCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcC
Q 002151 516 TGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVN 595 (959)
Q Consensus 516 TGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvN 595 (959)
||||+.||++||++||+..+...+.+++|.+++.+.++++.+.+++.+||||++|+||.++|+.||++||+|+|||||+|
T Consensus 570 TGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvN 649 (917)
T COG0474 570 TGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVN 649 (917)
T ss_pred CCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCch
Confidence 99999999999999999765433458999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhhhcCCeeEEec-CchHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cc-
Q 002151 596 DAPALKVADIGIAVA-DSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTSI-WE- 672 (959)
Q Consensus 596 DapALk~AdVGIamg-~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~~~~~~~~~-~~- 672 (959)
||||||+|||||||| +|+|+||+||||++++|+|++|+.+|++||++|+|++|++.|.++.|+..++.++++.++ ++
T Consensus 650 DapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~ 729 (917)
T COG0474 650 DAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFF 729 (917)
T ss_pred hHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999998 899999999999999999999999999999999999999999999999987777666554 33
Q ss_pred CCccHHHHHHHHHHhhhh-hcccccCC-----C-CCCCCCCc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 002151 673 FDFPPFMVLIIAILNDGT-IMTISKDR-----V-KPSPSPDS--WKLREIFATGVVIGSYLALTTVIFFWAIFETDFFQN 743 (959)
Q Consensus 673 ~~~~p~~il~i~~~~d~~-~~~l~~d~-----~-~~~~~p~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 743 (959)
.||.|+|++|+|+++|++ +++++.++ + +||++|++ |+.+.++.+.+..|...++++++.|.+.+... ...
T Consensus 730 ~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~-~~~ 808 (917)
T COG0474 730 LPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGF-IAN 808 (917)
T ss_pred ccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccc
Confidence 589999999999999997 47777653 2 34456766 66565555577778888888877776665311 000
Q ss_pred ccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcccC---hhHHHHHHHHHH
Q 002151 744 HFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIFVTRSRGWSFTER---PGLLLVTAFIIA 807 (959)
Q Consensus 744 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~---~~~~l~~~~~~~ 807 (959)
..+... ......++.|+.+++..+++.+.+|+.+.+|++. +++.+++++++.
T Consensus 809 ~~~~~~------------~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 863 (917)
T COG0474 809 TLGLDL------------FQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVI 863 (917)
T ss_pred ccchhh------------HHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHH
Confidence 001000 0233445555555555556789999987666544 344444444433
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-132 Score=1229.30 Aligned_cols=806 Identities=26% Similarity=0.399 Sum_probs=668.3
Q ss_pred ccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhhCCCCCC
Q 002151 17 DLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKK-ENKILKFLGFMWNPLSWVMEAAALMAITLARGGGKDV 95 (959)
Q Consensus 17 ~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~fl~~~~~~~~~~l~~aails~~~~~~~~~~~ 95 (959)
..|..+.+++++.|+++.+|||++|+++|+++||+|++++++ .+.|+.|+++|++|++|+|+++++++++. +
T Consensus 14 ~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~-------~ 86 (867)
T TIGR01524 14 KESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLT-------D 86 (867)
T ss_pred HHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHH-------h
Confidence 457889999999999999999999999999999999998876 45778999999999999999999999987 3
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEE------CCeEEEEecCCcCCCcEEEEeCCCeeccc
Q 002151 96 DYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLR------DGKWSEEDASVLVPGDIISIKLGDIIPAD 169 (959)
Q Consensus 96 ~~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~R------dG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD 169 (959)
+|.++++|++++++|+++++++|++++++.++|+++.+++++|+| ||++++|+++||||||+|.+++||+||||
T Consensus 87 ~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaD 166 (867)
T TIGR01524 87 DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPAD 166 (867)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEccc
Confidence 899999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred eEEEecCceEEeccccCCCCceeecCCCC-------------cccccceeeeCeEEEEEEEeccchhhhhhhhhhcccCC
Q 002151 170 ARLLEGDPLKIDQSALTGESLPVTKNPGD-------------GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTH 236 (959)
Q Consensus 170 ~~ll~g~~l~Vdes~LTGES~pv~K~~g~-------------~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~ 236 (959)
|+|++|+++.||||+|||||.|+.|.+|+ ++|+||.|.+|+++++|++||.+|.+|||++++++.++
T Consensus 167 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~ 246 (867)
T TIGR01524 167 ARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRG 246 (867)
T ss_pred EEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCCC
Confidence 99999998899999999999999999874 69999999999999999999999999999999988767
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCceec
Q 002151 237 VGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 316 (959)
Q Consensus 237 ~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~ilvk 316 (959)
++|+|+.++++++++..+..+.+++.++ .+.....+|...+..++++++++|||+||++++++++.|+++|+|+|+++|
T Consensus 247 ~t~lq~~~~~i~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk 325 (867)
T TIGR01524 247 QTAFDKGVKSVSKLLIRFMLVMVPVVLM-INGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVK 325 (867)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhee-hHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEc
Confidence 7899999999998765433332222222 222234567778888999999999999999999999999999999999999
Q ss_pred chhHHhhccCccEEeeCCCcceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhcccc--cCChHHHHHHHHhcCc--hh
Q 002151 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLE--NQDAIDAAIVSMLADP--KE 392 (959)
Q Consensus 317 ~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~~--~~~~i~~ai~~~~~~~--~~ 392 (959)
+++++|+||++|+||||||||||+|+|+|.++. .. ++.+.+.++..++.++..+ ..||+|.|++.++.+. ..
T Consensus 326 ~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~---~~-~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~ 401 (867)
T TIGR01524 326 ELSAIQNFGAMDILCTDKTGTLTQDKIELEKHI---DS-SGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQ 401 (867)
T ss_pred cchhhhhccCccEEEecCCCccccCeEEEEEEe---cC-CCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhh
Confidence 999999999999999999999999999999864 11 2445566676666554432 3589999999876532 22
Q ss_pred hhccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhccc----------hhHHHHHHHHHHHHHHccCeE
Q 002151 393 ARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWNK----------ADIEKKVHSVIDKFAERGLRS 462 (959)
Q Consensus 393 ~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~----------~~~~~~~~~~i~~~a~~Glr~ 462 (959)
.+..++.++++||||.+|+|++++++.++..+.++||+||.++++|... ++.++++.+.+++++++|+|+
T Consensus 402 ~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 481 (867)
T TIGR01524 402 TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRV 481 (867)
T ss_pred HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 3456788899999999999999887666667889999999999999641 234567888889999999999
Q ss_pred EEEEEeecCCCCC---CCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCC
Q 002151 463 LGVARQEVPAGTK---DSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPS 539 (959)
Q Consensus 463 l~vA~~~~~~~~~---~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~ 539 (959)
+++||++++.++. +..|++|+|+|+++|+||||||++++|++|+++||+|+|+||||+.||.+||+++||.. .
T Consensus 482 lavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~ 557 (867)
T TIGR01524 482 IAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----N 557 (867)
T ss_pred EEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----C
Confidence 9999998765431 12478899999999999999999999999999999999999999999999999999963 3
Q ss_pred ccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhh
Q 002151 540 SALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSA 619 (959)
Q Consensus 540 ~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~a 619 (959)
.+++|.+++.++++++.+.+++.+||||++||||+++|+.||++|++|+|||||+||+||||+||||||||+|+|+||++
T Consensus 558 ~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~a 637 (867)
T TIGR01524 558 DFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEA 637 (867)
T ss_pred CeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHh
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCccHHHHHHHHHHhhhhhcccccCC
Q 002151 620 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTSIWE-FDFPPFMVLIIAILNDGTIMTISKDR 698 (959)
Q Consensus 620 ADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~~~~~~~~~~~-~~~~p~~il~i~~~~d~~~~~l~~d~ 698 (959)
||+||++|||++|+.++++||++|+||+||+.|.++.|+..++.+++..++++ +|++|+|++|+|+++|++.+++++|+
T Consensus 638 ADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~~~~ 717 (867)
T TIGR01524 638 SDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWDK 717 (867)
T ss_pred CCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999999999999998887776665555 79999999999999997789999998
Q ss_pred CCCC--CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCcchhHHHHHHHHHHHHHH
Q 002151 699 VKPS--PSPDSWKLREIFATGVVIGSYLALTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVST 776 (959)
Q Consensus 699 ~~~~--~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 776 (959)
+.+. ++|.+|+.+.+...++..|++.+++++..|++.+.. ++.. .. .......+.+|...+
T Consensus 718 ~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~---~~--------~~~~~~~t~~f~~~~ 780 (867)
T TIGR01524 718 MDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFV------FSAN---TV--------EEQALFQSGWFVVGL 780 (867)
T ss_pred CChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH------hccc---ch--------hhhhHHHHHHHHHHH
Confidence 8665 255567777777778888998888877766654321 0000 00 011122334466667
Q ss_pred HHHH-HhhhhhccCCCcccCh-hHHHHHHHHHHHHHHHHHHhh--cc-ccccccCchhHHHHHHHHHHHHHHHHHHHHHH
Q 002151 777 ISQA-LIFVTRSRGWSFTERP-GLLLVTAFIIAQLVATLISAL--AT-SDFAGIHKIGWRWTSIIWLYNIIIYMLLDPIK 851 (959)
Q Consensus 777 ~~~~-~i~~~rs~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 851 (959)
++|. ++|++|+++.+++.++ .+.++++.++.+++.+++++. +. +++.++++ .|..|++++.++++ ++.++.|
T Consensus 781 ~~~~~~~~~~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~-~~~~~~~~~~~~~~--~~~e~~k 857 (867)
T TIGR01524 781 LSQTLVVHMIRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPL-SYFPWLIAILVGYM--ATMQLVK 857 (867)
T ss_pred HHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCc-cHHHHHHHHHHHHH--HHHHHHH
Confidence 7775 7899999874444444 333344444445555555542 22 33333322 33223333334333 5678888
Q ss_pred HHhHhhc
Q 002151 852 VAVGYAL 858 (959)
Q Consensus 852 ~~~r~~~ 858 (959)
.+..+.+
T Consensus 858 ~~~~~~~ 864 (867)
T TIGR01524 858 TFYIRRF 864 (867)
T ss_pred HHHHHhc
Confidence 7755544
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-126 Score=1199.75 Aligned_cols=844 Identities=22% Similarity=0.333 Sum_probs=672.4
Q ss_pred hcccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhhC
Q 002151 13 KEAVDLENIPIEEVFENLKCT-SDGLSSDEVQSRLEVFGHNKLEEKK-ENKILKFLGFMWNPLSWVMEAAALMAITLARG 90 (959)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~fl~~~~~~~~~~l~~aails~~~~~~ 90 (959)
+...+||..+.+++++.|+++ .+|||++||++|+++||+|++++++ .+.|+.|+++|++|++++|+++++++++....
T Consensus 12 ~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~ 91 (997)
T TIGR01106 12 EVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGI 91 (997)
T ss_pred hccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 345789999999999999998 5699999999999999999998755 56788999999999999999999998876321
Q ss_pred C------CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCCCcEEEEeCCC
Q 002151 91 G------GKDVDYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGD 164 (959)
Q Consensus 91 ~------~~~~~~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l~~Gd 164 (959)
. ....+|.++++|+++++++++++++||+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||
T Consensus 92 ~~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd 171 (997)
T TIGR01106 92 QASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGD 171 (997)
T ss_pred hhccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCC
Confidence 1 1224788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccceEEEecCceEEeccccCCCCceeecCCCC----------cccccceeeeCeEEEEEEEeccchhhhhhhhhhccc
Q 002151 165 IIPADARLLEGDPLKIDQSALTGESLPVTKNPGD----------GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST 234 (959)
Q Consensus 165 ~VPaD~~ll~g~~l~Vdes~LTGES~pv~K~~g~----------~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~ 234 (959)
+|||||++++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|++.++|++||.+|.+|++++++++.
T Consensus 172 ~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 251 (997)
T TIGR01106 172 RIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGL 251 (997)
T ss_pred EEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhc
Confidence 9999999999988899999999999999998864 699999999999999999999999999999998776
Q ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCc
Q 002151 235 -THVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGA 313 (959)
Q Consensus 235 -~~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~i 313 (959)
.+++|+|+.++++.+.+...+++..++ +++.+...+.+|...+..++++++++|||+||++++++++.++++|+++|+
T Consensus 252 ~~~~~pl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~i 330 (997)
T TIGR01106 252 ENGKTPIAIEIEHFIHIITGVAVFLGVS-FFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNC 330 (997)
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCc
Confidence 567999999999988754433222222 222222335567778888889999999999999999999999999999999
Q ss_pred eecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeee-cC-C--------CCCH-----HHHHHHHHHhccc-----
Q 002151 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVV-FG-N--------GVDK-----DMVILTAARASRL----- 373 (959)
Q Consensus 314 lvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~-~~-~--------~~~~-----~~~l~~aa~~~~~----- 373 (959)
++|+++++|+||++++||||||||||+|+|+|.++++.+. +. + ..+. +.++..++.|+..
T Consensus 331 lvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~ 410 (997)
T TIGR01106 331 LVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAG 410 (997)
T ss_pred EecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccc
Confidence 9999999999999999999999999999999999875321 10 0 0111 2355556666421
Q ss_pred ----------ccCChHHHHHHHHhc----CchhhhccceEeEeecCCCCCceEEEEEEec---CCeEEEEEeCCHHHHHH
Q 002151 374 ----------ENQDAIDAAIVSMLA----DPKEARAEITEVHFLPFNPTDKRTALTYTDK---NGKMHRASKGAPEQILN 436 (959)
Q Consensus 374 ----------~~~~~i~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~---~g~~~~~~KGa~e~il~ 436 (959)
..+||+|.|+++++. +..+.+..++.++.+||||+||||++++... ++++++++|||||.|++
T Consensus 411 ~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~ 490 (997)
T TIGR01106 411 QENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILE 490 (997)
T ss_pred cCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHH
Confidence 125899999988753 2334566788999999999999999887532 24678999999999999
Q ss_pred hhcc----------chhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCC--------C---CCCCCceEEEEeecCCCCC
Q 002151 437 LAWN----------KADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTK--------D---SPGGPWEFIGLLPLFDPPR 495 (959)
Q Consensus 437 ~c~~----------~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~--------~---~~e~~l~~lGli~l~D~lr 495 (959)
+|+. +++.++.+.+.+++|+++|+||+++||+.+++++. + ..|++|+|+|+++++||||
T Consensus 491 ~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr 570 (997)
T TIGR01106 491 RCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPR 570 (997)
T ss_pred HhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCCh
Confidence 9963 13456778888999999999999999998864321 1 1278999999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCC----------------------CCccccCccccccCCc
Q 002151 496 HDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMY----------------------PSSALLGEKKDTIVGL 553 (959)
Q Consensus 496 ~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----------------------~~~~l~g~~~~~~~~~ 553 (959)
+|++++|++|+++||+|+|+|||+..+|.++|+++|+..+.. ...+++|.+++.++++
T Consensus 571 ~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~ 650 (997)
T TIGR01106 571 AAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSE 650 (997)
T ss_pred HHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHH
Confidence 999999999999999999999999999999999999964321 1258899999999999
Q ss_pred chHHHHhhcC--ceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEec-CchHHHHhhccccccCCCch
Q 002151 554 PVDDLIEKAD--GFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVA-DSTDAARSASDIVLTEPGLS 630 (959)
Q Consensus 554 ~~~~~i~~~~--vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~aADivL~~~~~~ 630 (959)
++++.+++.. ||||++|+||+++|+.||+.|++|+|+|||+||+||||+|||||||| +|+|+||++||+||+||||+
T Consensus 651 el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~ 730 (997)
T TIGR01106 651 QLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFA 730 (997)
T ss_pred HHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHH
Confidence 9999998875 99999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCCccHHHHHHHHHHhhhh-hcccccCCCC------CC
Q 002151 631 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTSI-WEFDFPPFMVLIIAILNDGT-IMTISKDRVK------PS 702 (959)
Q Consensus 631 ~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~~~~~~~~~-~~~~~~p~~il~i~~~~d~~-~~~l~~d~~~------~~ 702 (959)
+|++++++||++|+|++|++.|.++.|+..++.++++.++ .+.|++|+|++|+|+++|++ ++++++|++. ||
T Consensus 731 ~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P 810 (997)
T TIGR01106 731 SIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQP 810 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCC
Confidence 9999999999999999999999999999988877666554 34588999999999999986 5999987764 33
Q ss_pred CCCCc-hhh-HHHHHH-HHHHHHHHHHHHHHHHHHHHhh-hcccc-cccccc------ccCCCCCCCcc--hh----HHH
Q 002151 703 PSPDS-WKL-REIFAT-GVVIGSYLALTTVIFFWAIFET-DFFQN-HFHVQS------LRNSGGKKIPK--VL----NGQ 765 (959)
Q Consensus 703 ~~p~~-~~~-~~~~~~-~~~~g~~~~~~~~~~~~~~~~~-~~~~~-~~g~~~------~~~~~~~~~~~--~~----~~~ 765 (959)
+.|.. ..+ ...+.. .+..|+++++..+++|++.+.. +|... .+++.. ..+..+..... .. ...
T Consensus 811 ~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (997)
T TIGR01106 811 RNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEF 890 (997)
T ss_pred cCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhh
Confidence 33221 112 233333 4466989998888777654421 11110 111100 00000000000 00 001
Q ss_pred HHHHHHHHHHHHHHH-HhhhhhccCCCcc--cChhHHHHHHHHHHHHHHHHHHhhcc-ccccccCchhHHHHHHHHHHHH
Q 002151 766 LASAVYLQVSTISQA-LIFVTRSRGWSFT--ERPGLLLVTAFIIAQLVATLISALAT-SDFAGIHKIGWRWTSIIWLYNI 841 (959)
Q Consensus 766 ~~~~~~~~~~i~~~~-~i~~~rs~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 841 (959)
..++++|...+++|+ +.+++|+++.+++ .+++.++++++++..++..++++.+. -.++...+..|.+|+.++++++
T Consensus 891 ~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~ 970 (997)
T TIGR01106 891 TCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSL 970 (997)
T ss_pred hhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHH
Confidence 345667777788886 6899999765543 24555565555544444333322211 2344556777777888888888
Q ss_pred HHHHHHHHHHHHhHhh
Q 002151 842 IIYMLLDPIKVAVGYA 857 (959)
Q Consensus 842 ~~~~~~~~~K~~~r~~ 857 (959)
+.++..++.|++.|++
T Consensus 971 ~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 971 LIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 8888899999887753
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-126 Score=1185.34 Aligned_cols=799 Identities=27% Similarity=0.398 Sum_probs=664.1
Q ss_pred cccccCCHHHHHHHcCCC-CCCCC-HHHHHHHHhhcCCCccCccc-ccHHHHHHHHH-HhHHHHHHHHHHHHHHHHhhCC
Q 002151 16 VDLENIPIEEVFENLKCT-SDGLS-SDEVQSRLEVFGHNKLEEKK-ENKILKFLGFM-WNPLSWVMEAAALMAITLARGG 91 (959)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GLs-~~e~~~r~~~~G~N~i~~~~-~~~~~~fl~~~-~~~~~~~l~~aails~~~~~~~ 91 (959)
.+||.++.+++++.|+++ .+||| ++|+++|+++||+|+++.++ ++.|..|+++| ++|++++|+++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--- 78 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--- 78 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc---
Confidence 478999999999999998 56999 99999999999999999765 67788999999 9999999999999999883
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCCCcEEEEeCCCeeccceE
Q 002151 92 GKDVDYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADAR 171 (959)
Q Consensus 92 ~~~~~~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ 171 (959)
+|.++++|++++++++.++++||+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+
T Consensus 79 ----~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ 154 (884)
T TIGR01522 79 ----NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLR 154 (884)
T ss_pred ----chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCceEEeccccCCCCceeecCCCC--------------cccccceeeeCeEEEEEEEeccchhhhhhhhhhccc-CC
Q 002151 172 LLEGDPLKIDQSALTGESLPVTKNPGD--------------GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST-TH 236 (959)
Q Consensus 172 ll~g~~l~Vdes~LTGES~pv~K~~g~--------------~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~ 236 (959)
|++|+++.||||+|||||.|+.|.+|+ ++|+||.|.+|+++++|++||.+|.+|+|++++++. .+
T Consensus 155 ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~ 234 (884)
T TIGR01522 155 IVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKP 234 (884)
T ss_pred EEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCC
Confidence 999987899999999999999999864 799999999999999999999999999999999876 56
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCceec
Q 002151 237 VGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 316 (959)
Q Consensus 237 ~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~ilvk 316 (959)
++|+|+.++++++++....++.+++.+++.| ..+.++...+...+++++++|||+||++++++++.|++||+|+|+++|
T Consensus 235 kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk 313 (884)
T TIGR01522 235 KTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVR 313 (884)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 7999999999998754332222222222222 234567788888999999999999999999999999999999999999
Q ss_pred chhHHhhccCccEEeeCCCcceeeCceEEEEEEEeeecC---CC-------------------CC--HHHHHHHHHHhcc
Q 002151 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFG---NG-------------------VD--KDMVILTAARASR 372 (959)
Q Consensus 317 ~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~---~~-------------------~~--~~~~l~~aa~~~~ 372 (959)
+++++|+||++|+||||||||||+|+|+|.+++..+... +. .+ ...++..++.|+.
T Consensus 314 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 393 (884)
T TIGR01522 314 KLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNN 393 (884)
T ss_pred chHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCC
Confidence 999999999999999999999999999999986421100 00 00 1234555555543
Q ss_pred cc--------cCChHHHHHHHHhcCc--hhhhccceEeEeecCCCCCceEEEEEEec-CCeEEEEEeCCHHHHHHhhccc
Q 002151 373 LE--------NQDAIDAAIVSMLADP--KEARAEITEVHFLPFNPTDKRTALTYTDK-NGKMHRASKGAPEQILNLAWNK 441 (959)
Q Consensus 373 ~~--------~~~~i~~ai~~~~~~~--~~~~~~~~~l~~~pF~s~~kr~sv~~~~~-~g~~~~~~KGa~e~il~~c~~~ 441 (959)
.. .+||+|.|++.++... ...+..++.++++||+|.+|||+++++.. +++.+.++|||||.|+.+|...
T Consensus 394 ~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~ 473 (884)
T TIGR01522 394 AKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYY 473 (884)
T ss_pred CeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhh
Confidence 21 2579999999876432 22344678899999999999999988753 5678899999999999999631
Q ss_pred -----------hhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCC
Q 002151 442 -----------ADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGV 510 (959)
Q Consensus 442 -----------~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI 510 (959)
++.++++.+.+++++++|+|++++||+++ +.+|+|+|+++++||||||++++|++|+++||
T Consensus 474 ~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi 545 (884)
T TIGR01522 474 QKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGV 545 (884)
T ss_pred hhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCC
Confidence 23456778888999999999999999974 46799999999999999999999999999999
Q ss_pred eEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEE
Q 002151 511 SVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMT 590 (959)
Q Consensus 511 ~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~ 590 (959)
+++|+|||+..||.++|+++||..+ ...+++|++++.++++++++.+++..||||++|+||.++|+.||++|++|+||
T Consensus 546 ~v~miTGD~~~tA~~ia~~~Gi~~~--~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mv 623 (884)
T TIGR01522 546 RIIMITGDSQETAVSIARRLGMPSK--TSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMT 623 (884)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCC--CCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEE
Confidence 9999999999999999999999753 34678999999999999999999999999999999999999999999999999
Q ss_pred cCCcCChhhhhcCCeeEEec-CchHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 002151 591 GDGVNDAPALKVADIGIAVA-DSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLT- 668 (959)
Q Consensus 591 GDGvNDapALk~AdVGIamg-~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~~~~~~~- 668 (959)
|||+||+||||+|||||||| +|+|+|+++||++|++|||+.|++++++||++|+||+|++.|.++.|+..++.+++..
T Consensus 624 GDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~ 703 (884)
T TIGR01522 624 GDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATL 703 (884)
T ss_pred CCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 99999999999999999999 8999999999999999999999999999999999999999999999998776655443
Q ss_pred HhccCCccHHHHHHHHHHhhhhh-cccccCCCC------CCCCCCchhh-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 002151 669 SIWEFDFPPFMVLIIAILNDGTI-MTISKDRVK------PSPSPDSWKL-REIFATGVVIGSYLALTTVIFFWAIFETDF 740 (959)
Q Consensus 669 ~~~~~~~~p~~il~i~~~~d~~~-~~l~~d~~~------~~~~p~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 740 (959)
+..+.|++|+|++|+|+++|+++ +++++|++. ||++++...+ +.++..+++.|+++++++++.|++.+..
T Consensus 704 ~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-- 781 (884)
T TIGR01522 704 MGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD-- 781 (884)
T ss_pred HcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC--
Confidence 33567999999999999999885 899987753 3333333333 3566677788999888877666543310
Q ss_pred cccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHH-HhhhhhccCCCccc---ChhHHHHHHHHHHH---HHHHH
Q 002151 741 FQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQA-LIFVTRSRGWSFTE---RPGLLLVTAFIIAQ---LVATL 813 (959)
Q Consensus 741 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~i~~~rs~~~~~~~---~~~~~l~~~~~~~~---~~~~~ 813 (959)
+ . .....++++|...+++|. +.|++|+++.++++ ..|.|+++++.+.. ++..+
T Consensus 782 -----~------~---------~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 841 (884)
T TIGR01522 782 -----G------V---------ITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIY 841 (884)
T ss_pred -----C------c---------chhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHHHH
Confidence 0 0 112334556666677775 78999997666543 23445544444332 22233
Q ss_pred HHhhccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 002151 814 ISALATSDFAGIHKIGWRWTSIIWLYNIIIYMLLDPIKVAVGY 856 (959)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~ 856 (959)
+++.. .++...+.+|..|+.+++++++.++..+++|++.|.
T Consensus 842 ~p~~~--~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 882 (884)
T TIGR01522 842 FPPLQ--SVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERS 882 (884)
T ss_pred HHHHH--HHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33222 244566777888888888999999999999988764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-124 Score=1173.84 Aligned_cols=817 Identities=22% Similarity=0.316 Sum_probs=650.0
Q ss_pred CHHHHHHHcCCC-CCCCC--HHHHHHHHhhcCCCccCcccc-cHHHHHHHHHHhHHHHHHHHHHHHHHHHhhC------C
Q 002151 22 PIEEVFENLKCT-SDGLS--SDEVQSRLEVFGHNKLEEKKE-NKILKFLGFMWNPLSWVMEAAALMAITLARG------G 91 (959)
Q Consensus 22 ~~~~~~~~l~~~-~~GLs--~~e~~~r~~~~G~N~i~~~~~-~~~~~fl~~~~~~~~~~l~~aails~~~~~~------~ 91 (959)
+.++++++|+++ ++||| ++||++|+++||+|+++++++ +.|..|+++|++|++++|+++++++++++.. .
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 789999999998 56999 999999999999999998775 6677899999999999999999999987521 2
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCeEEEEECCeEEEEecCCcCCCcEEEEeCCCeeccce
Q 002151 92 GKDVDYHDFVGILALLIINSTISFIEENNAGNAAAALMAR-LAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADA 170 (959)
Q Consensus 92 ~~~~~~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~-~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~ 170 (959)
+...+|.++++|+++++++.++++++|++++++.++|++. .+++++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 2234799999999999999999999999999999999864 477999999999999999999999999999999999999
Q ss_pred EEEecCceEEeccccCCCCceeecCCCCc--ccccceeeeCeEEEEEEEeccchhhhhhhhhhcccCCCCcHHHHHHHHH
Q 002151 171 RLLEGDPLKIDQSALTGESLPVTKNPGDG--VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVLTSIG 248 (959)
Q Consensus 171 ~ll~g~~l~Vdes~LTGES~pv~K~~g~~--v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~l~~~~~~i~ 248 (959)
+|++|+.+.||||+|||||.|+.|.+|+. +|+||.|.+|+++++|++||.+|.+||++++++++++++|+|+.++++.
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999778999999999999999998775 9999999999999999999999999999999988767789999999988
Q ss_pred HHHHHHHHHHH---HHHHHHhHhcc---c---------cchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCc
Q 002151 249 NFCICSIAIGM---IIEIIIIYGHQ---E---------RGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGA 313 (959)
Q Consensus 249 ~~~i~~i~i~~---~~~~~~~~~~~---~---------~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~i 313 (959)
+++...+.+.+ ++.+++.+... . .++...+..++++++++|||+||++++++++.++++|+|+|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 76533222111 11111111110 1 245667788899999999999999999999999999999999
Q ss_pred eecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEee-ecC-CC----CC--HHHHHHHHHHh-ccc-----------
Q 002151 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEV-VFG-NG----VD--KDMVILTAARA-SRL----------- 373 (959)
Q Consensus 314 lvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~-~~~-~~----~~--~~~~l~~aa~~-~~~----------- 373 (959)
++|+++++|+||++|+||||||||||+|+|+|.+++..+ .+. ++ .+ ...++..++.+ +..
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 999999999999999999999999999999999987532 111 00 11 11223333332 221
Q ss_pred ccCChHHHHHHHHhc----CchhhhccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhccc--------
Q 002151 374 ENQDAIDAAIVSMLA----DPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWNK-------- 441 (959)
Q Consensus 374 ~~~~~i~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~-------- 441 (959)
..+||+|.|+++++. +..+.+..++.++.+||+|.+|||+++++..+++++.++|||||.++++|...
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 125799999988764 22333455777889999999999999998767778899999999999999641
Q ss_pred --hhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCC---CCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEc
Q 002151 442 --ADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTK---DSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMIT 516 (959)
Q Consensus 442 --~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~---~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miT 516 (959)
.+.++++.+.+++++++|+|++++||++++.++. +..|++|+|+|+++++||||+|++++|++||++||+|+|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 0235677888999999999999999998864332 23478999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCC
Q 002151 517 GDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVND 596 (959)
Q Consensus 517 GD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvND 596 (959)
|||+.||.+||++|||.++ +..+++|++++.+.++++++.+++.+||||++|+||+++|+.||++|++|+|||||+||
T Consensus 603 GD~~~tA~~iA~~~GI~~~--~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvND 680 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTF--GGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTND 680 (941)
T ss_pred CCChHHHHHHHHHcCCCCC--CceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCch
Confidence 9999999999999999753 34689999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCeeEEec-CchHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCC
Q 002151 597 APALKVADIGIAVA-DSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTS-IWEFD 674 (959)
Q Consensus 597 apALk~AdVGIamg-~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~~~~~~~~-~~~~~ 674 (959)
+||||+|||||||| +|+|+|+++||++|++|+|++|++++++||++|+||+|++.|.+++|+..++..++..+ ..+.|
T Consensus 681 apALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~p 760 (941)
T TIGR01517 681 APALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSP 760 (941)
T ss_pred HHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999 99999999999999999999999999999999999999999999999987666555443 35679
Q ss_pred ccHHHHHHHHHHhhhh-hcccccCCCCC------CCCCCchh-hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Q 002151 675 FPPFMVLIIAILNDGT-IMTISKDRVKP------SPSPDSWK-LREIFATGVVIGSYLALTTVIFFWAIFETDFFQNHFH 746 (959)
Q Consensus 675 ~~p~~il~i~~~~d~~-~~~l~~d~~~~------~~~p~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g 746 (959)
++|+|++|+|+++|++ ++++++|++.+ |++++... .+.++..++..|+++++++++.|++... ++ +
T Consensus 761 l~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~----~ 834 (941)
T TIGR01517 761 LTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IF----D 834 (941)
T ss_pred HHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hh----c
Confidence 9999999999999976 58998887633 22222222 2456666778899988888877665431 11 1
Q ss_pred cccccCCCCCCCcchhHHHHHHHHHHHHHHHHHH-HhhhhhccCC-Cccc--ChhHHHHHHHHHHHHHHHHHHhhccccc
Q 002151 747 VQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQA-LIFVTRSRGW-SFTE--RPGLLLVTAFIIAQLVATLISALATSDF 822 (959)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~i~~~rs~~~-~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 822 (959)
.... +... .. .....++++|...+++|. +.+++|+.+. +++. ..++|+++++.+..++..++..+.+ .+
T Consensus 835 ~~~~-~~~~----~~-~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~~~-~~ 907 (941)
T TIGR01517 835 VSGP-DEIT----SH-QQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFGG-SF 907 (941)
T ss_pred ccCc-cccc----cc-ccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 1000 0000 00 012233445555555664 7899998653 2221 1233444433333222222222221 23
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002151 823 AGIHKIGWRWTSIIWLYNIIIYMLLDPIKVA 853 (959)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 853 (959)
++..+..|..|+.+++++++.+++.+++|++
T Consensus 908 f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 908 FSTVSLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred hcccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4556777877888888888888888888876
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-122 Score=1054.36 Aligned_cols=811 Identities=23% Similarity=0.319 Sum_probs=625.1
Q ss_pred CHHHHHHHcCCC-CCCCCH--HHHHHHHhhcCCCccCcccccHH-HHHHHHHHhHHHHHHHHHHHHHHHHhhC-CCCCCc
Q 002151 22 PIEEVFENLKCT-SDGLSS--DEVQSRLEVFGHNKLEEKKENKI-LKFLGFMWNPLSWVMEAAALMAITLARG-GGKDVD 96 (959)
Q Consensus 22 ~~~~~~~~l~~~-~~GLs~--~e~~~r~~~~G~N~i~~~~~~~~-~~fl~~~~~~~~~~l~~aails~~~~~~-~~~~~~ 96 (959)
..+.+++.|+++ .+||+. +|.++|++.||.|.+++++++.+ ...++.+.+.-.++|.+||++|+.++.. .+.+..
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~G 181 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDG 181 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcc
Confidence 478999999999 569986 88999999999999999886554 4556777777778999999999998864 344568
Q ss_pred hhhHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCCCcEEEEeCCCeeccceEE
Q 002151 97 YHDFVGILALL----IINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARL 172 (959)
Q Consensus 97 ~~~~~~I~~~l----~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~l 172 (959)
|++++.|++.+ +++++-+|-||++-++..+ .....+..|+|||+.++|+..|||||||+.|+.||.|||||++
T Consensus 182 W~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~---~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvl 258 (1034)
T KOG0204|consen 182 WIEGVAILLSVILVVLVTAVNDYRQELQFRKLQK---EKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVL 258 (1034)
T ss_pred cccchhheeeEEEEEEEeecchhHHhhhhhhhhh---hhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEE
Confidence 99998886543 4566667777776655432 2335688999999999999999999999999999999999999
Q ss_pred EecCceEEeccccCCCCceeecCC--CCcccccceeeeCeEEEEEEEeccchhhhhhhhhhccc-CCCCcHHHHHHHHHH
Q 002151 173 LEGDPLKIDQSALTGESLPVTKNP--GDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST-THVGHFQQVLTSIGN 249 (959)
Q Consensus 173 l~g~~l~Vdes~LTGES~pv~K~~--g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~ 249 (959)
++|++|.+|||+|||||.++.|.+ +.+++|||.+.+|.++++|+++|.+|+-|++..++... ++++|+|-.+++++.
T Consensus 259 i~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~ 338 (1034)
T KOG0204|consen 259 IQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLAT 338 (1034)
T ss_pred EeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHH
Confidence 999999999999999999999987 56899999999999999999999999999999988877 588999988877654
Q ss_pred HH---HHHHHHHHHHHHHHhHhcc-----cc---ch----HHH----HHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhh
Q 002151 250 FC---ICSIAIGMIIEIIIIYGHQ-----ER---GY----RVG----IDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQ 310 (959)
Q Consensus 250 ~~---i~~i~i~~~~~~~~~~~~~-----~~---~~----~~~----~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k 310 (959)
.+ -+.++...++.++..|... .. .+ ... +...+.++++++|+|||+++++++|+++++|.+
T Consensus 339 ~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmk 418 (1034)
T KOG0204|consen 339 QIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMK 418 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhc
Confidence 31 1111222222222222211 01 11 111 222334678899999999999999999999999
Q ss_pred CCceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeeecCC-------CCCHHH--HH-HHHHHhcc--------
Q 002151 311 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGN-------GVDKDM--VI-LTAARASR-------- 372 (959)
Q Consensus 311 ~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~-------~~~~~~--~l-~~aa~~~~-------- 372 (959)
++++||+++|||+||+.++||+|||||||+|+|+|.+.+++....+ ..++.. ++ ...+.++.
T Consensus 419 D~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~ 498 (1034)
T KOG0204|consen 419 DNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEK 498 (1034)
T ss_pred chhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCC
Confidence 9999999999999999999999999999999999999887542222 122211 11 11111110
Q ss_pred -----cccCChHHHHHHHHh----cCchhhhccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhcc---
Q 002151 373 -----LENQDAIDAAIVSML----ADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWN--- 440 (959)
Q Consensus 373 -----~~~~~~i~~ai~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~--- 440 (959)
...++|.|.|+++.. .+.++.|...+.++++||||.+|+|+++++.++|..+.++|||.|.++..|..
T Consensus 499 ~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~ 578 (1034)
T KOG0204|consen 499 GGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYID 578 (1034)
T ss_pred CCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheEC
Confidence 012579999998864 35566778888999999999999999999977776349999999999999975
Q ss_pred --------chhHHHHHHHHHHHHHHccCeEEEEEEeecCCC-------C-CCCCCCCceEEEEeecCCCCCcchHHHHHH
Q 002151 441 --------KADIEKKVHSVIDKFAERGLRSLGVARQEVPAG-------T-KDSPGGPWEFIGLLPLFDPPRHDSAETIRR 504 (959)
Q Consensus 441 --------~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~-------~-~~~~e~~l~~lGli~l~D~lr~~v~eaI~~ 504 (959)
+++.++.+...++.|+.+|+|++++||+++.+. + .+..+.+++++|+++++||.|||++++|+.
T Consensus 579 ~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~ 658 (1034)
T KOG0204|consen 579 SNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQL 658 (1034)
T ss_pred CCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHH
Confidence 234556889999999999999999999985332 1 245678999999999999999999999999
Q ss_pred HHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHHhhCC
Q 002151 505 ALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARK 584 (959)
Q Consensus 505 l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g 584 (959)
|++|||.|.|+||||..||++||.+|||.++...-.++.|.++.++++++.++++.+.+|+||.+|.||+-+|+.|+++|
T Consensus 659 Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g 738 (1034)
T KOG0204|consen 659 CQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQG 738 (1034)
T ss_pred HHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcC
Confidence 99999999999999999999999999998876666899999999999999999999999999999999999999999999
Q ss_pred CEEEEEcCCcCChhhhhcCCeeEEec-CchHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 002151 585 HIVGMTGDGVNDAPALKVADIGIAVA-DSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL- 662 (959)
Q Consensus 585 ~~V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~- 662 (959)
|+||.||||.||+||||+||||.||| .|||+|||+|||||+||||++|+++++|||..|.||+||++|+++.|+..+.
T Consensus 739 ~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv 818 (1034)
T KOG0204|consen 739 EVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIV 818 (1034)
T ss_pred cEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehh
Confidence 99999999999999999999999999 9999999999999999999999999999999999999999999999986544
Q ss_pred HHHHHHHhccCCccHHHHHHHHHHhhhh-hcccccCCCCCC---C----CCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002151 663 GFLLLTSIWEFDFPPFMVLIIAILNDGT-IMTISKDRVKPS---P----SPDSWKLREIFATGVVIGSYLALTTVIFFWA 734 (959)
Q Consensus 663 ~~~~~~~~~~~~~~p~~il~i~~~~d~~-~~~l~~d~~~~~---~----~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 734 (959)
.|......-..|++.+|+||+|+++|.+ +++++.|++.+. | |..+...+-++...+.+.+|+.++.+.+.+.
T Consensus 819 ~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~ 898 (1034)
T KOG0204|consen 819 NFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFA 898 (1034)
T ss_pred hhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4443334445799999999999999988 699999876432 2 3344455667777888999988887765554
Q ss_pred HHhhhccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH-HHhhhhhccC-CCc----ccChhHHHHHHHHHHH
Q 002151 735 IFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQ-ALIFVTRSRG-WSF----TERPGLLLVTAFIIAQ 808 (959)
Q Consensus 735 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~i~~~rs~~-~~~----~~~~~~~l~~~~~~~~ 808 (959)
... .|+......+ ......+.+|=++ ++.| ++-|+.|.-. ... ++++ ++++++...
T Consensus 899 G~~------if~~~~~~~~--------~~~~~nTiIFNtF-V~~qvFNEinaRki~~~NvFkgi~~N~---~F~~ii~~T 960 (1034)
T KOG0204|consen 899 GKS------IFGLNGPLHS--------PPSVHNTIIFNTF-VFCQVFNEINARKIDERNVFKGIFRNR---LFCVIITIT 960 (1034)
T ss_pred chh------hhccCCCCCC--------chhhheeeehhHH-HHHHHHHHHhhcchhHHhHHHHHhcCc---eEEEEeeee
Confidence 331 1222111111 0122223333333 4444 4678888732 221 2233 222222222
Q ss_pred HHHHHHHhhccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002151 809 LVATLISALATSDFAGIHKIGWRWTSIIWLYNIIIYMLLDPIKVA 853 (959)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 853 (959)
+++..+.+...-.++...+++|..|++++++.++.++.--+.|.+
T Consensus 961 ~v~QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 961 VVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred eehhhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 222222222111234566777777777666666666555555544
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-116 Score=1101.09 Aligned_cols=785 Identities=27% Similarity=0.384 Sum_probs=619.8
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhhCC---CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEC
Q 002151 65 FLGFMWNPLSWVMEAAALMAITLARGG---GKDVDYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRD 141 (959)
Q Consensus 65 fl~~~~~~~~~~l~~aails~~~~~~~---~~~~~~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~Rd 141 (959)
+++||++|++++|+++++++++++... ....+|.++++|++++++|+.++++||+++++++++|+++.+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 468999999999999999999986321 22358999999999999999999999999999999999999999999999
Q ss_pred CeEEEEecCCcCCCcEEEEeCCCeeccceEEEecCceEEeccccCCCCceeecCCC-------------Ccccccceeee
Q 002151 142 GKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPG-------------DGVYSGSTCKQ 208 (959)
Q Consensus 142 G~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~l~Vdes~LTGES~pv~K~~g-------------~~v~aGt~v~~ 208 (959)
|++++|+++||||||+|.|++||+|||||+|++|+.+.||||+|||||.|+.|.++ |++|+||.|.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999998889999999999999999875 78999999999
Q ss_pred CeEEEEEEEeccchhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhc-----cccch----HHHH
Q 002151 209 GEIEAVVIATGVHTFFGKAAHLVEST-THVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGH-----QERGY----RVGI 278 (959)
Q Consensus 209 G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~~-----~~~~~----~~~~ 278 (959)
|+++++|++||.+|++|||+++++.. .+++|+|+.+++++.++...+.+.+++.+++.+.. ...+| ...+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 99999999999999999999988776 67899999999998775443322222222211110 01122 2234
Q ss_pred HHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeee-----
Q 002151 279 DNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVV----- 353 (959)
Q Consensus 279 ~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~----- 353 (959)
...+++++++|||+||+++++++++++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+.
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 456788999999999999999999999999999999999999999999999999999999999999999864210
Q ss_pred -----cCCCCC-------------------HHHHHHHHHHhcccc------------cCChHHHHHHHHhcCch------
Q 002151 354 -----FGNGVD-------------------KDMVILTAARASRLE------------NQDAIDAAIVSMLADPK------ 391 (959)
Q Consensus 354 -----~~~~~~-------------------~~~~l~~aa~~~~~~------------~~~~i~~ai~~~~~~~~------ 391 (959)
.+.+++ .+.++..++.|+... .+||.|.|++..+.+.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 000010 123344555555321 25899999987643211
Q ss_pred --------------hhhccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhcc-----------chhHHH
Q 002151 392 --------------EARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWN-----------KADIEK 446 (959)
Q Consensus 392 --------------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~-----------~~~~~~ 446 (959)
..+..++.++.+||||++|||+++++. ++++..++|||||.|+++|+. +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 123457789999999999999999875 466889999999999999963 124567
Q ss_pred HHHHHHHHHHH-ccCeEEEEEEeecCCCC----------CCCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEE
Q 002151 447 KVHSVIDKFAE-RGLRSLGVARQEVPAGT----------KDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMI 515 (959)
Q Consensus 447 ~~~~~i~~~a~-~Glr~l~vA~~~~~~~~----------~~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~mi 515 (959)
++.+.+++|++ +|+||+++|||.++.+. .+..|++|+|+|+++++||||+|++++|++||++||+++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78889999999 99999999999986421 13458899999999999999999999999999999999999
Q ss_pred cCCCcHHHHHHHHHhCCCCCCC--CCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCC
Q 002151 516 TGDQLAIGKETGRRLGMGTNMY--PSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDG 593 (959)
Q Consensus 516 TGD~~~tA~~ia~~lGi~~~~~--~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDG 593 (959)
|||+..||.++|+++|+..+.. ....++|.+++.+++++..+.+.+..||||++|+||.++|+.+|+.|++|+|+|||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG 639 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDG 639 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCC
Confidence 9999999999999999975321 12467888888888888888888889999999999999999999999999999999
Q ss_pred cCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcc
Q 002151 594 VNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTS-IWE 672 (959)
Q Consensus 594 vNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~~~~~~~~-~~~ 672 (959)
+||+||||+||||||||+|+++||++||+++.+|||++|++++++||++|+|+++++.|.+++|+..++..+++.+ .++
T Consensus 640 ~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~ 719 (917)
T TIGR01116 640 VNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIP 719 (917)
T ss_pred cchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998877766544 345
Q ss_pred CCccHHHHHHHHHHhhhh-hcccccCCCC------CCCCCCchh-hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 002151 673 FDFPPFMVLIIAILNDGT-IMTISKDRVK------PSPSPDSWK-LREIFATGVVIGSYLALTTVIFFWAIFETDFFQNH 744 (959)
Q Consensus 673 ~~~~p~~il~i~~~~d~~-~~~l~~d~~~------~~~~p~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 744 (959)
.+|+|+|++|+|+++|++ +++++.+++. ||+.++... .++.+..+++.|+++++++++.|++.+....+...
T Consensus 720 ~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 799 (917)
T TIGR01116 720 EGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGC 799 (917)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccc
Confidence 799999999999999966 5888887653 333333322 34567778889999998877666554321111000
Q ss_pred cc--cccccCCCCCCCcch---hHHHHHHHHHHHHHHHHHH-HhhhhhccCCCccc---ChhHHHHHHHHHHHH---HHH
Q 002151 745 FH--VQSLRNSGGKKIPKV---LNGQLASAVYLQVSTISQA-LIFVTRSRGWSFTE---RPGLLLVTAFIIAQL---VAT 812 (959)
Q Consensus 745 ~g--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~-~i~~~rs~~~~~~~---~~~~~l~~~~~~~~~---~~~ 812 (959)
.+ .....+ ++.... .......+++|...+++|+ +.|++|+++.+++. ..|.|+++++++..+ +.+
T Consensus 800 ~~~~~~~~~~---~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~ 876 (917)
T TIGR01116 800 DEDSFTTCPD---FEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLIL 876 (917)
T ss_pred cccccccccc---cccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHHHHH
Confidence 00 000000 000000 0112334666677777786 78999997665443 234455444444332 222
Q ss_pred HHHhhccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 002151 813 LISALATSDFAGIHKIGWRWTSIIWLYNIIIYMLLDPIKVAVG 855 (959)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r 855 (959)
++++.. .+++..+..|..|+++++++++.++..+++|+++|
T Consensus 877 ~v~~~~--~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 877 YVPFLS--RIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HhHHHH--HHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 333322 34556778888888889999999999999998754
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-118 Score=1019.45 Aligned_cols=853 Identities=24% Similarity=0.375 Sum_probs=692.5
Q ss_pred hhhhHHhhhhcc-cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHH
Q 002151 4 TAIALEAISKEA-VDLENIPIEEVFENLKCT-SDGLSSDEVQSRLEVFGHNKLEEKK-ENKILKFLGFMWNPLSWVMEAA 80 (959)
Q Consensus 4 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~fl~~~~~~~~~~l~~a 80 (959)
+.-+|++.++|. ++.|++|.+|++++++++ .+|||.++|.+++++-|||.+++++ .+.|.+|++|+++.+.++++++
T Consensus 24 ~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~ 103 (1019)
T KOG0203|consen 24 KKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIG 103 (1019)
T ss_pred hhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHH
Confidence 344678888877 899999999999999999 7899999999999999999998766 5678899999999999999999
Q ss_pred HHHHHHHhhCCC-----CCCch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCC
Q 002151 81 ALMAITLARGGG-----KDVDY-HDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVP 154 (959)
Q Consensus 81 ails~~~~~~~~-----~~~~~-~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~ 154 (959)
++++++.+.... .+.+. +-++++..++++..+..|+||.+..+.+++.+++.|..+.|+|||+...+.++||||
T Consensus 104 a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVv 183 (1019)
T KOG0203|consen 104 AILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVV 183 (1019)
T ss_pred HHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhccc
Confidence 999988653211 11122 122333445566788899999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCCeeccceEEEecCceEEeccccCCCCceeecCC----------CCcccccceeeeCeEEEEEEEeccchhh
Q 002151 155 GDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNP----------GDGVYSGSTCKQGEIEAVVIATGVHTFF 224 (959)
Q Consensus 155 GDiI~l~~Gd~VPaD~~ll~g~~l~Vdes~LTGES~pv~K~~----------g~~v~aGt~v~~G~~~~~V~~tG~~T~~ 224 (959)
||+|.++-||+||||.|++++.++++|+|+|||||.|..+.+ .|+.|.+|.+.+|.++++|++||.+|.+
T Consensus 184 GD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~ 263 (1019)
T KOG0203|consen 184 GDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVM 263 (1019)
T ss_pred ccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEE
Confidence 999999999999999999999999999999999999999976 3678999999999999999999999999
Q ss_pred hhhhhhhcc-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHH
Q 002151 225 GKAAHLVES-TTHVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAI 303 (959)
Q Consensus 225 gki~~l~~~-~~~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~ 303 (959)
|+|+.+... ...++|+++.++++..+... +++.+.+.++..-...++.|..++..++.++++.+|++||..+++.+..
T Consensus 264 G~ia~l~~~~~~~~t~~~~ei~~fi~~it~-vAi~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~Ltl 342 (1019)
T KOG0203|consen 264 GRIASLASGLEDGKTPIAKEIEHFIHIITG-VAIFLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLTL 342 (1019)
T ss_pred eehhhhhccCCCCCCcchhhhhchHHHHHH-HHHHHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHHH
Confidence 999998766 47789999999888776432 2222222222222223677888877888899999999999999999999
Q ss_pred HHHHhhhCCceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeeecCC---------------CCCHHHHHHHHH
Q 002151 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGN---------------GVDKDMVILTAA 368 (959)
Q Consensus 304 ~~~~l~k~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~---------------~~~~~~~l~~aa 368 (959)
-++||+++++++|++.++|+||+.++||+|||||||+|+|+|.+++.+..+.. +..-..+..++.
T Consensus 343 takrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~ 422 (1019)
T KOG0203|consen 343 TAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIAT 422 (1019)
T ss_pred HHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999886421110 111123455666
Q ss_pred Hhccc---------------ccCChHHHHHHHHh----cCchhhhccceEeEeecCCCCCceEEEEEEecC---CeEEEE
Q 002151 369 RASRL---------------ENQDAIDAAIVSML----ADPKEARAEITEVHFLPFNPTDKRTALTYTDKN---GKMHRA 426 (959)
Q Consensus 369 ~~~~~---------------~~~~~i~~ai~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~---g~~~~~ 426 (959)
.|++. ..+|+.+.|++++. ++..+.|...+.+.++||||.+|+.-.+....| .+..+.
T Consensus 423 lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~ 502 (1019)
T KOG0203|consen 423 LCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLV 502 (1019)
T ss_pred HhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceee
Confidence 66532 23578899998764 344677888889999999999999877766433 577889
Q ss_pred EeCCHHHHHHhhcc----------chhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCC-----------CCCCCCceEE
Q 002151 427 SKGAPEQILNLAWN----------KADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTK-----------DSPGGPWEFI 485 (959)
Q Consensus 427 ~KGa~e~il~~c~~----------~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~-----------~~~e~~l~~l 485 (959)
.|||||.++++|+. ++...+.+++...++...|-||++++++.++++.. .-.-.+|.|+
T Consensus 503 mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~Fl 582 (1019)
T KOG0203|consen 503 MKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFL 582 (1019)
T ss_pred ecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhcccc
Confidence 99999999999974 24567788888999999999999999998875431 2345679999
Q ss_pred EEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCC----------------------CCcccc
Q 002151 486 GLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMY----------------------PSSALL 543 (959)
Q Consensus 486 Gli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----------------------~~~~l~ 543 (959)
|++++.||||..+|+++.+||.|||+|+|+||||+.||++||++.||..+.. ...++.
T Consensus 583 Gl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~Vih 662 (1019)
T KOG0203|consen 583 GLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIH 662 (1019)
T ss_pred chhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEe
Confidence 9999999999999999999999999999999999999999999999754211 123678
Q ss_pred CccccccCCcchHHHHhhcC--ceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEec-CchHHHHhhc
Q 002151 544 GEKKDTIVGLPVDDLIEKAD--GFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVA-DSTDAARSAS 620 (959)
Q Consensus 544 g~~~~~~~~~~~~~~i~~~~--vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~aA 620 (959)
|.++.++..+++++++++.. ||||.||+||+.||+..|++|.+|+.||||+||+||||+|||||||| .|+|++|+||
T Consensus 663 G~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAA 742 (1019)
T KOG0203|consen 663 GSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAA 742 (1019)
T ss_pred cccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhc
Confidence 99999999999999998876 99999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCCccHHHHHHHHHHhhhhh-cccccCC
Q 002151 621 DIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTS-IWEFDFPPFMVLIIAILNDGTI-MTISKDR 698 (959)
Q Consensus 621 DivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~~~~~~~~-~~~~~~~p~~il~i~~~~d~~~-~~l~~d~ 698 (959)
|+||+||||++|+..|++||-+|+|+||.+.|.+++|++++..++++++ ..+.++.++.+|+|.+.+|..| ++++++.
T Consensus 743 DmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~ 822 (1019)
T KOG0203|consen 743 DMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEK 822 (1019)
T ss_pred ceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccC
Confidence 9999999999999999999999999999999999999999888766543 3567888999999999999874 8999875
Q ss_pred C------CCCCCCCchh--hHHHHHH-HHHHHHHHHHHHHHHHH-HHHhhhccccc-cc---------cccccCC--CCC
Q 002151 699 V------KPSPSPDSWK--LREIFAT-GVVIGSYLALTTVIFFW-AIFETDFFQNH-FH---------VQSLRNS--GGK 756 (959)
Q Consensus 699 ~------~~~~~p~~~~--~~~~~~~-~~~~g~~~~~~~~~~~~-~~~~~~~~~~~-~g---------~~~~~~~--~~~ 756 (959)
. ++||.|..-+ ..+++.+ +..+|+++++..|+.|+ ++..++|+|.. .| ++.+.++ +.|
T Consensus 823 aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeW 902 (1019)
T KOG0203|consen 823 AESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEW 902 (1019)
T ss_pred chhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccc
Confidence 4 4555554322 2354444 56889999999987655 45556666543 11 1222211 122
Q ss_pred CC--cchhHHHHHHHHHHHHHHHHHH-HhhhhhccCCCccc--ChhHHHHHHHHHHHHHHHHHHhhcc-ccccccCchhH
Q 002151 757 KI--PKVLNGQLASAVYLQVSTISQA-LIFVTRSRGWSFTE--RPGLLLVTAFIIAQLVATLISALAT-SDFAGIHKIGW 830 (959)
Q Consensus 757 ~~--~~~~~~~~~~~~~~~~~i~~~~-~i~~~rs~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 830 (959)
+. +...+++.+ +.||...++.|+ ..+.+.||+-+.+. ..|+.+.+++++-.+++.++.+.+. ...+.+.|..|
T Consensus 903 tyeqRk~le~tc~-taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~ 981 (1019)
T KOG0203|consen 903 TYEQRKYLEYTCY-TAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKF 981 (1019)
T ss_pred cHHHHHHHHHhhh-hheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCc
Confidence 21 222223333 445555566775 67788888877664 4677888887777777766654433 22345778889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhc
Q 002151 831 RWTSIIWLYNIIIYMLLDPIKVAVGYAL 858 (959)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~K~~~r~~~ 858 (959)
.||+..+.++++.++.++++|+++|.+-
T Consensus 982 ~~wl~a~P~~ilIfvydE~Rk~~IR~~P 1009 (1019)
T KOG0203|consen 982 QWWLVAFPFGILIFVYDEVRKLFIRRYP 1009 (1019)
T ss_pred EEEEecccceeeeeeHHHHHhHhhhhCC
Confidence 9999999999999999999999999765
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-113 Score=1082.10 Aligned_cols=690 Identities=22% Similarity=0.277 Sum_probs=563.0
Q ss_pred CCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHHHHHHH
Q 002151 34 SDGLSSDEVQSRLEVFGHNKLEEKKENKILKFLGFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTI 113 (959)
Q Consensus 34 ~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~fl~~~~~~~~~~l~~aails~~~~~~~~~~~~~~~~~~I~~~l~i~~~~ 113 (959)
.+|||++|+++|+++||+|+++.++++.+..|++++++|+++++++++++++.. .+|.+++.|+++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~-------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLLD-------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999998888888999999999988887775554432 3688899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCCCcEEEEe--CCCeeccceEEEecCceEEeccccCCCCce
Q 002151 114 SFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIK--LGDIIPADARLLEGDPLKIDQSALTGESLP 191 (959)
Q Consensus 114 ~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l~--~Gd~VPaD~~ll~g~~l~Vdes~LTGES~p 191 (959)
++++++++.++++++.. .+++++|+|||+|++|+++||||||+|.|+ +||+|||||+|++|+ +.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEecccccCCccc
Confidence 99999999888887643 467899999999999999999999999999 999999999999997 58999999999999
Q ss_pred eecCCC------------------Ccccccceeee-------CeEEEEEEEeccchhhhhhhhhhccc-CCCCcHHHHHH
Q 002151 192 VTKNPG------------------DGVYSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVEST-THVGHFQQVLT 245 (959)
Q Consensus 192 v~K~~g------------------~~v~aGt~v~~-------G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~ 245 (959)
+.|.+. +++|+||.|.+ |.+.++|++||.+|..|++.+++... +..+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999762 25999999995 78999999999999999999887665 56678888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCceecchhHHhhcc
Q 002151 246 SIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 325 (959)
Q Consensus 246 ~i~~~~i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~ilvk~~~~iE~Lg 325 (959)
++..+++...+++.++ +++.....+.++...+..++.+++++||++||++++++++.|+.||+|+|++||++.++|++|
T Consensus 368 ~~~~~l~~~a~i~~i~-~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIY-TIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 7766543322222221 122222234577888889999999999999999999999999999999999999999999999
Q ss_pred CccEEeeCCCcceeeCceEEEEEEEeeecCC--C-------CCHHHHHHHHHHhccc------ccCChHHHHHHHHhcCc
Q 002151 326 GMDVLCSDKTGTLTLNKLTVDKILIEVVFGN--G-------VDKDMVILTAARASRL------ENQDAIDAAIVSMLADP 390 (959)
Q Consensus 326 ~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~--~-------~~~~~~l~~aa~~~~~------~~~~~i~~ai~~~~~~~ 390 (959)
++|++|||||||||+|+|+|.+++....... . .....+....+.|+.. ..+||+|.|+++..+..
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999999764211000 0 1112233334444432 23799999999875421
Q ss_pred hhh-------------------hccceEeEeecCCCCCceEEEEEEecC-CeEEEEEeCCHHHHHHhhccchhHHHHHHH
Q 002151 391 KEA-------------------RAEITEVHFLPFNPTDKRTALTYTDKN-GKMHRASKGAPEQILNLAWNKADIEKKVHS 450 (959)
Q Consensus 391 ~~~-------------------~~~~~~l~~~pF~s~~kr~sv~~~~~~-g~~~~~~KGa~e~il~~c~~~~~~~~~~~~ 450 (959)
.+. ...+++++.+||+|++|||+++++..+ ++.+.++|||||.|+++|... ..++++.+
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~-~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE-TVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc-CCChhHHH
Confidence 100 145778899999999999999998643 567899999999999999853 45678888
Q ss_pred HHHHHHHccCeEEEEEEeecCCC--------CCCCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHH
Q 002151 451 VIDKFAERGLRSLGVARQEVPAG--------TKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAI 522 (959)
Q Consensus 451 ~i~~~a~~Glr~l~vA~~~~~~~--------~~~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~t 522 (959)
.+++|+++|+||||+|||++++. +++..|++|+|+|+++|+||+|||++++|++|+++||+|+|+||||+.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998642 2345689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCC---------------------------------------------------CccccCccccc--
Q 002151 523 GKETGRRLGMGTNMYP---------------------------------------------------SSALLGEKKDT-- 549 (959)
Q Consensus 523 A~~ia~~lGi~~~~~~---------------------------------------------------~~~l~g~~~~~-- 549 (959)
|.+||++|||..+... ..+++|++++.
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 9999999999643210 01334443322
Q ss_pred -cCCcchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCC
Q 002151 550 -IVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPG 628 (959)
Q Consensus 550 -~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~ 628 (959)
+.++++.++++++.||||++|+||.++|+.||+.|++|+|||||+||+||||+||||||||++ |++ .|||+++.+|+
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCc
Confidence 233467778888999999999999999999999999999999999999999999999999864 555 79999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccHHHHHHHHHHhhhh-hcccccCCCCC---CCC
Q 002151 629 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTSIWEFDFPPFMVLIIAILNDGT-IMTISKDRVKP---SPS 704 (959)
Q Consensus 629 ~~~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~~~~~~~~~~~~~~~p~~il~i~~~~d~~-~~~l~~d~~~~---~~~ 704 (959)
|++|+++|++||+++.|+++.+.|.+..++...+.+++. ...+.+++++|++|++++.+.+ .++++.+++.+ +++
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~ 922 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSIL-YLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKER 922 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCC
Confidence 999999999999999999999999999998776655433 3466899999999999999987 47888776533 234
Q ss_pred CCchhh-HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002151 705 PDSWKL-REIFATGVVIGSYLALTTVIFFWAIFE 737 (959)
Q Consensus 705 p~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~ 737 (959)
|..-.+ ...+...+..+++..+..++.|++...
T Consensus 923 P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~ 956 (1054)
T TIGR01657 923 PPSNLFSVYILTSVLIQFVLHILSQVYLVFELHA 956 (1054)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 433223 345555667777777777766666554
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-101 Score=977.45 Aligned_cols=788 Identities=17% Similarity=0.206 Sum_probs=587.3
Q ss_pred cCCCccCcccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002151 49 FGHNKLEEKKENKI----LKFLGFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNA 124 (959)
Q Consensus 49 ~G~N~i~~~~~~~~----~~fl~~~~~~~~~~l~~aails~~~~~~~~~~~~~~~~~~I~~~l~i~~~~~~~~e~~a~~~ 124 (959)
|..|.+...|++.| +.|++||.+|.+++|+++++++++....... .+....+++++++++++.+++|+++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~--~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTY--RGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCC--ccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999998876 6889999999999999999999885432211 23334555666668899999999999988
Q ss_pred HHHHHhccCCeEEEEEC-CeEEEEecCCcCCCcEEEEeCCCeeccceEEEecCc----eEEeccccCCCCceeecCCC--
Q 002151 125 AAALMARLAPKAKVLRD-GKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKNPG-- 197 (959)
Q Consensus 125 ~~~L~~~~~~~~~V~Rd-G~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~----l~Vdes~LTGES~pv~K~~g-- 197 (959)
.++. ..++++|+|| |++++++++||+|||+|.|++||+||||++|++++. ++||||+|||||.|+.|.+.
T Consensus 79 d~~~---n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKEV---NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHHH---hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 7654 4578999997 899999999999999999999999999999998543 79999999999999998631
Q ss_pred ----------------------------------------------Ccccccceeee-CeEEEEEEEeccchhhhhhhhh
Q 002151 198 ----------------------------------------------DGVYSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 230 (959)
Q Consensus 198 ----------------------------------------------~~v~aGt~v~~-G~~~~~V~~tG~~T~~gki~~l 230 (959)
|.+|+||.+++ |.+.|+|++||.+|++++...
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~- 234 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNAT- 234 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCC-
Confidence 46899999999 999999999999998876432
Q ss_pred hcccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccc----cch---------------HHHHHHHHHHHHhhcCC
Q 002151 231 VESTTHVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQE----RGY---------------RVGIDNLLVILIGGIPI 291 (959)
Q Consensus 231 ~~~~~~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~~~~----~~~---------------~~~~~~~l~llv~~iP~ 291 (959)
....+.+++++.++++..++++..++.+++..++...... ..| ...+..+++++..++|+
T Consensus 235 -~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 235 -QAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred -CCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 2235779999999999877554333333332222111111 011 12456778899999999
Q ss_pred cchHHHHHHHHHHH------HHhhhC----CceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeee-cCCCC--
Q 002151 292 AMPTVLSVTMAIGS------HRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVV-FGNGV-- 358 (959)
Q Consensus 292 aLp~~~~v~l~~~~------~~l~k~----~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~-~~~~~-- 358 (959)
+||+++++++++++ .+|.++ ++++|+.+++|+||++++||+|||||||+|+|+++++.+.+. ++.+.
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999999 788874 599999999999999999999999999999999999986431 11000
Q ss_pred -----------------------------C----------------HHHHHHHHHHhccc--------------ccCChH
Q 002151 359 -----------------------------D----------------KDMVILTAARASRL--------------ENQDAI 379 (959)
Q Consensus 359 -----------------------------~----------------~~~~l~~aa~~~~~--------------~~~~~i 379 (959)
+ ..+++..++.|+.. ..++|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 01233444445421 135899
Q ss_pred HHHHHHHhcCch------------------hhhccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhcc-
Q 002151 380 DAAIVSMLADPK------------------EARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWN- 440 (959)
Q Consensus 380 ~~ai~~~~~~~~------------------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~- 440 (959)
|.|++..+...+ .....++.++.+||+|+||||++++++++|+.++++|||||.|+++|..
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 999998753221 0124688899999999999999999988888899999999999999975
Q ss_pred chhHHHHHHHHHHHHHHccCeEEEEEEeecCCCC-------------------------CCCCCCCceEEEEeecCCCCC
Q 002151 441 KADIEKKVHSVIDKFAERGLRSLGVARQEVPAGT-------------------------KDSPGGPWEFIGLLPLFDPPR 495 (959)
Q Consensus 441 ~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~-------------------------~~~~e~~l~~lGli~l~D~lr 495 (959)
.++.++.+.+++++|+.+|+|||++|||.+++++ .+..|++|+|+|+++++||||
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 3455678889999999999999999999987542 134689999999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCC------------------------------------
Q 002151 496 HDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPS------------------------------------ 539 (959)
Q Consensus 496 ~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~------------------------------------ 539 (959)
+|++++|+.|++|||+|||+|||+.+||.+||++|||..+....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 99999999999999999999999999999999999997543210
Q ss_pred ---ccccCccccccCCc----chHHHHhhcC--ceeecChhhHHHHHHHHhhC-CCEEEEEcCCcCChhhhhcCCeeEEe
Q 002151 540 ---SALLGEKKDTIVGL----PVDDLIEKAD--GFAGVFPEHKFEIVKRLQAR-KHIVGMTGDGVNDAPALKVADIGIAV 609 (959)
Q Consensus 540 ---~~l~g~~~~~~~~~----~~~~~i~~~~--vfar~~Pe~K~~iV~~Lq~~-g~~V~m~GDGvNDapALk~AdVGIam 609 (959)
.+++|+.++.+.+. .+.+++.+++ ||||++|+||+++|+.+|+. |++|+|||||+||+||||+|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 14455544433222 2334555565 99999999999999999998 99999999999999999999999998
Q ss_pred -c-CchHHHHhhccccccCCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC----CccHHHHHH
Q 002151 610 -A-DSTDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTSIWEF----DFPPFMVLI 682 (959)
Q Consensus 610 -g-~gtd~Ak~aADivL~~~~~~~I~~ai-~~gR~~~~~i~~~~~~~l~~ni~~v~~~~~~~~~~~~----~~~p~~il~ 682 (959)
| +|. .|+.+||++|.+ |+.|.+++ .+||++|+|+++++.|.++.|+..++..+++.++.++ ++.+++++|
T Consensus 794 ~g~eg~-qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 870 (1057)
T TIGR01652 794 SGKEGM-QAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVL 870 (1057)
T ss_pred cChHHH-HHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 3 333 467799999964 99999998 7899999999999999999999988887777665433 577889999
Q ss_pred HHHHhhhhh-ccccc-CCCCCC----CCCC--------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc
Q 002151 683 IAILNDGTI-MTISK-DRVKPS----PSPD--------SWKLREIFATGVVIGSYLALTTVIFFWAIFETDFFQNHFHVQ 748 (959)
Q Consensus 683 i~~~~d~~~-~~l~~-d~~~~~----~~p~--------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 748 (959)
+|++++.++ ++++. |...++ +.|. .....+.|..+++.|++++++.+++.++.+...... ..|-
T Consensus 871 ~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~g~- 948 (1057)
T TIGR01652 871 YNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFV-SSGS- 948 (1057)
T ss_pred HHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-cCCc-
Confidence 999988764 77764 333211 1221 122235667788899999988876655544211100 0110
Q ss_pred cccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcccChhHHHHHHHHHHH-HHHHHHHhhc-cccccccC
Q 002151 749 SLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIFVTRSRGWSFTERPGLLLVTAFIIAQ-LVATLISALA-TSDFAGIH 826 (959)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~-~~~~~~~~ 826 (959)
......+.+++|..+.++.++. +...+++|+|+.....|+.+.+++.. .+...+.... .++.....
T Consensus 949 -----------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~wt~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1057)
T TIGR01652 949 -----------LDDFSSVGVIVFTALVVIVNLK-IALEINRWNWISLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRV 1016 (1057)
T ss_pred -----------ccchhhHHHHHHHHHHHHHHHH-HHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHH
Confidence 0013455566666665555543 34567788877666666554443321 1111111000 01111111
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhHhhccc
Q 002151 827 KIGWRWTSIIWLYNIIIYMLLDPIKVAVGYALSG 860 (959)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~ 860 (959)
...+.+|+.+++..++.++|+.++|++.|.+.|.
T Consensus 1017 ~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~ 1050 (1057)
T TIGR01652 1017 MGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPP 1050 (1057)
T ss_pred HccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 2235566677778888888999999999988874
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-98 Score=888.43 Aligned_cols=544 Identities=24% Similarity=0.363 Sum_probs=450.6
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhhCCC--CCCc--hhhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhccCC-eEE
Q 002151 67 GFMWNPLSWVMEAAALMAITLARGGG--KDVD--YHDFVGILALLIINSTISFIE----ENNAGNAAAALMARLAP-KAK 137 (959)
Q Consensus 67 ~~~~~~~~~~l~~aails~~~~~~~~--~~~~--~~~~~~I~~~l~i~~~~~~~~----e~~a~~~~~~L~~~~~~-~~~ 137 (959)
.+++||+.|+++++++++++++.... .... +.+.+.|+++++++.+++.++ |+|+++++++|+++.++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 47899999999999999998753210 0011 234566777777777777766 78999999999998886 776
Q ss_pred -EEECCeEEEEecCCcCCCcEEEEeCCCeeccceEEEecCceEEeccccCCCCceeecCCC---CcccccceeeeCeEEE
Q 002151 138 -VLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPG---DGVYSGSTCKQGEIEA 213 (959)
Q Consensus 138 -V~RdG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~l~Vdes~LTGES~pv~K~~g---~~v~aGt~v~~G~~~~ 213 (959)
|.|||++++|++++|+|||+|.+++||+|||||++++|+. +||||+|||||.|+.|++| +.||+||.|.+|++++
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 7899999999999999999999999999999999999987 9999999999999999999 8899999999999999
Q ss_pred EEEEeccchhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCc
Q 002151 214 VVIATGVHTFFGKAAHLVEST-THVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIA 292 (959)
Q Consensus 214 ~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~a 292 (959)
+|++||.+|++||+.++++++ .+++|+|.....+...+.. +++ +++.++..+. ...++...+...+++++++|||+
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i-i~l-~~~~~~~~~~-~~~~~~~~~~~~val~V~~IP~a 263 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI-IFL-VVILTMYPLA-KFLNFNLSIAMLIALAVCLIPTT 263 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH-HHH-HHHHHHHHHH-hhccHHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999987 5788998766554332211 111 1111111111 01133445566778888999999
Q ss_pred chHHHHHHHHHHHHHhhhCCceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhcc
Q 002151 293 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASR 372 (959)
Q Consensus 293 Lp~~~~v~l~~~~~~l~k~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~ 372 (959)
||..++++++.|++||+|+|+++|+++++|+||++|++|||||||||+|++.+.++. .. ++.+.++++..++.++.
T Consensus 264 L~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~---~~-~~~~~~~ll~~a~~~~~ 339 (673)
T PRK14010 264 IGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFI---PV-KSSSFERLVKAAYESSI 339 (673)
T ss_pred HHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEE---eC-CCccHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999887776643 22 24555667766666654
Q ss_pred cccCChHHHHHHHHhcCchhhhccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhccch-hHHHHHHHH
Q 002151 373 LENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWNKA-DIEKKVHSV 451 (959)
Q Consensus 373 ~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~-~~~~~~~~~ 451 (959)
.+.||++.|++.++..... .......+++||++++|+|++.+ +|+ .+.||+++.++++|.... ..+..+.+.
T Consensus 340 -~s~~P~~~AIv~~a~~~~~-~~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~ 412 (673)
T PRK14010 340 -ADDTPEGRSIVKLAYKQHI-DLPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDAL 412 (673)
T ss_pred -CCCChHHHHHHHHHHHcCC-CchhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHH
Confidence 3458999999987643211 00112235689999999999864 243 456999999999997421 223346667
Q ss_pred HHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhC
Q 002151 452 IDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLG 531 (959)
Q Consensus 452 i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lG 531 (959)
+++++++|+|+++++. +++++|+++++||||||++++|++||++||+++|+||||+.||.+||+++|
T Consensus 413 ~~~~a~~G~~~l~v~~-------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elG 479 (673)
T PRK14010 413 VKGVSKKGGTPLVVLE-------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG 479 (673)
T ss_pred HHHHHhCCCeEEEEEE-------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 7889999999999874 248999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecC
Q 002151 532 MGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVAD 611 (959)
Q Consensus 532 i~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~ 611 (959)
|. ++|||++||||.++|+.+|++|++|+|||||+||+|||++||||||||+
T Consensus 480 I~-----------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgs 530 (673)
T PRK14010 480 VD-----------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNS 530 (673)
T ss_pred Cc-----------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCC
Confidence 94 3799999999999999999999999999999999999999999999999
Q ss_pred chHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002151 612 STDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLL 667 (959)
Q Consensus 612 gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~~~~~~ 667 (959)
|||+||++||+||+||||++|++++++||++|.|+++++.|.++.|++.++..+..
T Consensus 531 GTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a 586 (673)
T PRK14010 531 GTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPA 586 (673)
T ss_pred CCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987765543
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-96 Score=919.83 Aligned_cols=783 Identities=15% Similarity=0.154 Sum_probs=577.0
Q ss_pred hhcCCCccCcccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 002151 47 EVFGHNKLEEKKENKI----LKFLGFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENNAG 122 (959)
Q Consensus 47 ~~~G~N~i~~~~~~~~----~~fl~~~~~~~~~~l~~aails~~~~~~~~~~~~~~~~~~I~~~l~i~~~~~~~~e~~a~ 122 (959)
.+|..|.+...|++.| +.+++||..+.++++++.+++.++...... ..+...+.+++++++.++.+.+++++++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~--~~~t~~~PL~~vl~v~~ike~~Ed~~r~ 162 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF--GRGASILPLAFVLLVTAVKDAYEDWRRH 162 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC--CcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999998875 577899999999999999999987643221 1344567777888888999999999998
Q ss_pred HHHHHHHhccCCeEEEEECCeEEEEecCCcCCCcEEEEeCCCeeccceEEEecCc----eEEeccccCCCCceeecCCC-
Q 002151 123 NAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKNPG- 197 (959)
Q Consensus 123 ~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~----l~Vdes~LTGES~pv~K~~g- 197 (959)
++.++.. +.+++|+|+|++++++|++|+|||+|.|++||+||||++|++++. ++||||+|||||.|+.|.++
T Consensus 163 k~d~~~N---~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 163 RSDRIEN---NRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred HhHHhhc---CcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccc
Confidence 8877653 568999999999999999999999999999999999999998332 58999999999999999742
Q ss_pred --------------------------------------------CcccccceeeeC-eEEEEEEEeccchhhhhhhhhhc
Q 002151 198 --------------------------------------------DGVYSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVE 232 (959)
Q Consensus 198 --------------------------------------------~~v~aGt~v~~G-~~~~~V~~tG~~T~~gki~~l~~ 232 (959)
+.+++||.+++. .++|+|++||.+|+... +...
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~--N~~~ 317 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAML--NNSG 317 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhh--cCCC
Confidence 235667777765 59999999999998421 1111
Q ss_pred ccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH--hHhccc-c------------------------ch----HHHHHHH
Q 002151 233 STTHVGHFQQVLTSIGNFCICSIAIGMIIEIII--IYGHQE-R------------------------GY----RVGIDNL 281 (959)
Q Consensus 233 ~~~~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~--~~~~~~-~------------------------~~----~~~~~~~ 281 (959)
...+.+++++.++++..+++++.++.+++..+. .|.... . .+ ...+...
T Consensus 318 ~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 397 (1178)
T PLN03190 318 APSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMS 397 (1178)
T ss_pred CCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 125779999999998876544333333322222 121100 0 00 1112233
Q ss_pred HHHHHhhcCCcchHHHHHHHHHHHHHhhhCC----------ceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEe
Q 002151 282 LVILIGGIPIAMPTVLSVTMAIGSHRLSQQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIE 351 (959)
Q Consensus 282 l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~----------ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~ 351 (959)
++++..+||++|++.++++...++..+.++. +.+|+.+.+|+||+|++||+|||||||+|+|+++++.+.
T Consensus 398 lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~ 477 (1178)
T PLN03190 398 VIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477 (1178)
T ss_pred HHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEEC
Confidence 5667789999999999999988788887755 789999999999999999999999999999999999874
Q ss_pred e-ecCCC---------------------------C------------C-H-----HHHHHHHHHhccc------------
Q 002151 352 V-VFGNG---------------------------V------------D-K-----DMVILTAARASRL------------ 373 (959)
Q Consensus 352 ~-~~~~~---------------------------~------------~-~-----~~~l~~aa~~~~~------------ 373 (959)
+ .|+++ . + + .+++...+.|+..
T Consensus 478 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~ 557 (1178)
T PLN03190 478 GVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPT 557 (1178)
T ss_pred CEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcc
Confidence 2 11100 0 0 0 1234444555422
Q ss_pred ------ccCChHHHHHHHHhcCch----------------hhhccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCH
Q 002151 374 ------ENQDAIDAAIVSMLADPK----------------EARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAP 431 (959)
Q Consensus 374 ------~~~~~i~~ai~~~~~~~~----------------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~ 431 (959)
...+|.|.|++..+.+.+ ..+..|++++.+||+|+|||||+++++++|+.++++||||
T Consensus 558 ~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~ 637 (1178)
T PLN03190 558 VKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGAD 637 (1178)
T ss_pred ccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCc
Confidence 123799999998764322 2356789999999999999999999988888999999999
Q ss_pred HHHHHhhccc--hhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCC-------------------------CCCCCCceE
Q 002151 432 EQILNLAWNK--ADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTK-------------------------DSPGGPWEF 484 (959)
Q Consensus 432 e~il~~c~~~--~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~-------------------------~~~e~~l~~ 484 (959)
|.|+++|... .+.++++.+++++|+++|+|||++|||.+++++. +..|++|++
T Consensus 638 e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~ 717 (1178)
T PLN03190 638 TSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTI 717 (1178)
T ss_pred HHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEE
Confidence 9999999753 3467788899999999999999999999875321 346899999
Q ss_pred EEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCC-------------------------
Q 002151 485 IGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPS------------------------- 539 (959)
Q Consensus 485 lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~------------------------- 539 (959)
+|+++++||||+|++++|++|+++||+|||+|||+.+||++||++|||.++....
T Consensus 718 lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~ 797 (1178)
T PLN03190 718 LGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKL 797 (1178)
T ss_pred EEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhc
Confidence 9999999999999999999999999999999999999999999999997543211
Q ss_pred ----------------------ccccCccccccCC----cchHHHHhhcC--ceeecChhhHHHHHHHHhhC-CCEEEEE
Q 002151 540 ----------------------SALLGEKKDTIVG----LPVDDLIEKAD--GFAGVFPEHKFEIVKRLQAR-KHIVGMT 590 (959)
Q Consensus 540 ----------------------~~l~g~~~~~~~~----~~~~~~i~~~~--vfar~~Pe~K~~iV~~Lq~~-g~~V~m~ 590 (959)
.+++|..++.+.+ +.+.+++.+++ ||||++|+||+++|+.+|+. +++|+||
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaI 877 (1178)
T PLN03190 798 TTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAI 877 (1178)
T ss_pred cccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 1223332222222 23445555666 79999999999999999997 5899999
Q ss_pred cCCcCChhhhhcCCeeEEe-c-CchHHHHhhccccccCCCchHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002151 591 GDGVNDAPALKVADIGIAV-A-DSTDAARSASDIVLTEPGLSVIISAVL-TSRAIFQRMKNYTIYAVSITIRIVLGFLLL 667 (959)
Q Consensus 591 GDGvNDapALk~AdVGIam-g-~gtd~Ak~aADivL~~~~~~~I~~ai~-~gR~~~~~i~~~~~~~l~~ni~~v~~~~~~ 667 (959)
|||+||+||||+|||||++ | +|.+|++ |||+++ +.|+.+.+++. +||+.|+|+.+.+.|.+++|+..+++.+++
T Consensus 878 GDGaNDv~mIq~AdVGIGIsG~EG~qA~~-aSDfaI--~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f 954 (1178)
T PLN03190 878 GDGANDVSMIQMADVGVGISGQEGRQAVM-ASDFAM--GQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWY 954 (1178)
T ss_pred CCCcchHHHHHhcCeeeeecCchhHHHHH-hhccch--hhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999997 4 6666665 999999 56888988874 799999999999999999999999999888
Q ss_pred HHhccCC----ccHHHHHHHHHHhh-hhhcccc-cCCCCCC----CCCC--------chhhHHHHHHHHHHHHHHHHHHH
Q 002151 668 TSIWEFD----FPPFMVLIIAILND-GTIMTIS-KDRVKPS----PSPD--------SWKLREIFATGVVIGSYLALTTV 729 (959)
Q Consensus 668 ~~~~~~~----~~p~~il~i~~~~d-~~~~~l~-~d~~~~~----~~p~--------~~~~~~~~~~~~~~g~~~~~~~~ 729 (959)
.++.+|. +.++.+.++|++.. ++++.++ +|+..|. +.|+ .....+.|+.|++.|++.+++.|
T Consensus 955 ~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iif 1034 (1178)
T PLN03190 955 VLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVF 1034 (1178)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHH
Confidence 8776663 45667777776554 4456664 5655332 1222 22223567888999999999888
Q ss_pred HHHHHHHhhhccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcccChhHHHHHHHHHHH-
Q 002151 730 IFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIFVTRSRGWSFTERPGLLLVTAFIIAQ- 808 (959)
Q Consensus 730 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~~~~~l~~~~~~~~- 808 (959)
++.++.+.... .+ ......++++.+.++.++ -+...+++|+|+.+..+|+.+.+.+..
T Consensus 1035 f~~~~~~~~~~----~~----------------~~~~~~~~~~~~v~~vnl-~i~~~~~~wt~~~~~~i~~Si~~~~i~~ 1093 (1178)
T PLN03190 1035 FVPLFAYWAST----ID----------------GSSIGDLWTLAVVILVNL-HLAMDIIRWNWITHAAIWGSIVATFICV 1093 (1178)
T ss_pred HHHHHHhcCCC----cC----------------ceeEhHhhhhHHHHHHHH-HHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 66555442211 00 011123334444444443 244567788887776666654443322
Q ss_pred HHHHHHHhhcc-ccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhHhhccch
Q 002151 809 LVATLISALAT-SDFAGIHKIGWRWTSIIWLYNIIIYMLLDPIKVAVGYALSGR 861 (959)
Q Consensus 809 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~ 861 (959)
++...++.... +.+.. ....+.+|+.+++..++.++|+.++|++.|.++|..
T Consensus 1094 ~~~~~~~~~~~~~~~~~-~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~ 1146 (1178)
T PLN03190 1094 IVIDAIPTLPGYWAIFH-IAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCD 1146 (1178)
T ss_pred HHHHhcccchhHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 22222211111 11111 122355677778888888899999999999998853
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-94 Score=855.77 Aligned_cols=536 Identities=24% Similarity=0.337 Sum_probs=449.0
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhhCC----CC---CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-eEEE
Q 002151 67 GFMWNPLSWVMEAAALMAITLARGG----GK---DVDYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAP-KAKV 138 (959)
Q Consensus 67 ~~~~~~~~~~l~~aails~~~~~~~----~~---~~~~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~-~~~V 138 (959)
.||+||+.++++++++++++++... +. ...|...+.+++.+++..+++.++|+|+++..++|+++.++ +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 5889999999999999999886321 11 11233334444555666777889999999999999998775 7999
Q ss_pred EECCe-EEEEecCCcCCCcEEEEeCCCeeccceEEEecCceEEeccccCCCCceeecCCCCc---ccccceeeeCeEEEE
Q 002151 139 LRDGK-WSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGDG---VYSGSTCKQGEIEAV 214 (959)
Q Consensus 139 ~RdG~-~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~l~Vdes~LTGES~pv~K~~g~~---v~aGt~v~~G~~~~~ 214 (959)
+|||+ +++|++++|+|||+|.+++||+|||||++++|.. .||||+|||||.|+.|++|+. ||+||.|.+|+++++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99988 9999999999999999999999999999999985 999999999999999999988 999999999999999
Q ss_pred EEEeccchhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcc
Q 002151 215 VIATGVHTFFGKAAHLVEST-THVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAM 293 (959)
Q Consensus 215 V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aL 293 (959)
|+++|.+|++|||.++++++ .+++|+|..++.+..++...+++.++..+++.++ .+.. ..+..++++++++|||++
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~-~g~~--~~l~~~iallV~aiP~al 264 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY-SGGA--LSITVLVALLVCLIPTTI 264 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCch--HHHHHHHHHHHHcccchh
Confidence 99999999999999999987 6679999877776554332222222221222121 1222 357778899999999999
Q ss_pred hHHHHHHHHHHHHHhhhCCceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhccc
Q 002151 294 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRL 373 (959)
Q Consensus 294 p~~~~v~l~~~~~~l~k~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~ 373 (959)
+..++.+...|+.||+|+|+++|+++++|+||++|++|||||||||+|+|++.+++ .. ++.+.++++..++.++..
T Consensus 265 g~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~---~~-~~~~~~~ll~~a~~~s~~ 340 (679)
T PRK01122 265 GGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFL---PV-PGVTEEELADAAQLSSLA 340 (679)
T ss_pred hhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEE---eC-CCCCHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999998865 22 356677777777777655
Q ss_pred ccCChHHHHHHHHhcCc---hhhhccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhccc-hhHHHHHH
Q 002151 374 ENQDAIDAAIVSMLADP---KEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWNK-ADIEKKVH 449 (959)
Q Consensus 374 ~~~~~i~~ai~~~~~~~---~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~~ 449 (959)
. .||.+.|++..+... ......++..+++||++.++++++.+ +| ..+.||++|.+++.|... ...++++.
T Consensus 341 s-~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~ 414 (679)
T PRK01122 341 D-ETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELD 414 (679)
T ss_pred C-CCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHH
Confidence 4 469999998876431 11111245677899999988887653 34 468899999999999642 23456778
Q ss_pred HHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHH
Q 002151 450 SVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRR 529 (959)
Q Consensus 450 ~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~ 529 (959)
+.+++++++|+|++++|++ ++++|+++++||+|||++++|++||++||+++|+||||+.||.+||++
T Consensus 415 ~~~~~~a~~G~~~l~va~~-------------~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e 481 (679)
T PRK01122 415 AAVDEVARKGGTPLVVAED-------------NRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE 481 (679)
T ss_pred HHHHHHHhCCCcEEEEEEC-------------CeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH
Confidence 8889999999999999974 389999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEe
Q 002151 530 LGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAV 609 (959)
Q Consensus 530 lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIam 609 (959)
+||. ++|||++||||+++|+.+|++|++|+|||||+||+|||++|||||||
T Consensus 482 lGId-----------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM 532 (679)
T PRK01122 482 AGVD-----------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 532 (679)
T ss_pred cCCc-----------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe
Confidence 9994 37999999999999999999999999999999999999999999999
Q ss_pred cCchHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002151 610 ADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 658 (959)
Q Consensus 610 g~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~~ni 658 (959)
|+|||+||++||+||+||||+.|++++++||++.-.--....|++..-+
T Consensus 533 gsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 533 NSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 9999999999999999999999999999999998554455777765444
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-89 Score=814.17 Aligned_cols=542 Identities=24% Similarity=0.341 Sum_probs=451.5
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhhC----C--CCCCchhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-eE
Q 002151 67 GFMWNPLSWVMEAAALMAITLARG----G--GKDVDYHDF---VGILALLIINSTISFIEENNAGNAAAALMARLAP-KA 136 (959)
Q Consensus 67 ~~~~~~~~~~l~~aails~~~~~~----~--~~~~~~~~~---~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~-~~ 136 (959)
.||.||+.++++++++++++++.. + +....|++. +.+++.+++..+++.++|++++++.++|+++.++ .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 578999999999999999987531 1 111246654 3334445677788889999999999999998877 48
Q ss_pred EEEE-CCeEEEEecCCcCCCcEEEEeCCCeeccceEEEecCceEEeccccCCCCceeecCCCCc---ccccceeeeCeEE
Q 002151 137 KVLR-DGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGDG---VYSGSTCKQGEIE 212 (959)
Q Consensus 137 ~V~R-dG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~l~Vdes~LTGES~pv~K~~g~~---v~aGt~v~~G~~~ 212 (959)
+|+| ||++++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.||.|++|+. ||+||.|.+|+++
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA-SVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEccE-EEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8885 9999999999999999999999999999999999975 999999999999999999975 9999999999999
Q ss_pred EEEEEeccchhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCC
Q 002151 213 AVVIATGVHTFFGKAAHLVEST-THVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPI 291 (959)
Q Consensus 213 ~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~ 291 (959)
++|+++|.+|++|||.++++++ .+++|+|..++.+..++...+.+.++..+ .+..+. .....+..++++++++|||
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~--~~~~~~-~~~~~~~~lvallV~aiP~ 263 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLW--PFAAYG-GNAISVTVLVALLVCLIPT 263 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhc-ChhHHHHHHHHHHHHhCch
Confidence 9999999999999999999887 66799998877776554322222111111 111111 1123466678899999999
Q ss_pred cchHHHHHHHHHHHHHhhhCCceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhc
Q 002151 292 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARAS 371 (959)
Q Consensus 292 aLp~~~~v~l~~~~~~l~k~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~ 371 (959)
+++...+.....|+.||+|+|+++|+++++|+||++|++|||||||||+|+|++.+++ .. ++.+.++++..++.++
T Consensus 264 aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~---~~-~~~~~~~ll~~aa~~~ 339 (675)
T TIGR01497 264 TIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFI---PA-QGVDEKTLADAAQLAS 339 (675)
T ss_pred hhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEE---ec-CCCcHHHHHHHHHHhc
Confidence 8887777777789999999999999999999999999999999999999999999865 22 3566777887777776
Q ss_pred ccccCChHHHHHHHHhcCchh--hhccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhccc-hhHHHHH
Q 002151 372 RLENQDAIDAAIVSMLADPKE--ARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWNK-ADIEKKV 448 (959)
Q Consensus 372 ~~~~~~~i~~ai~~~~~~~~~--~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~ 448 (959)
.. +.||.+.|++..+.+... ....++..++.||++.++++++.+. +| ..+.||++|.+++.|... ...++++
T Consensus 340 ~~-s~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~ 414 (675)
T TIGR01497 340 LA-DDTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDL 414 (675)
T ss_pred CC-CCCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHH
Confidence 54 456999999887543211 1112345678999999877765432 45 468899999999988532 2234567
Q ss_pred HHHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHH
Q 002151 449 HSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGR 528 (959)
Q Consensus 449 ~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~ 528 (959)
++.+++++++|+|++++|++. +++|+++++||+|||++++|++||++||+++|+|||+..+|.++|+
T Consensus 415 ~~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~ 481 (675)
T TIGR01497 415 DQAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAA 481 (675)
T ss_pred HHHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 788899999999999999853 8999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE
Q 002151 529 RLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIA 608 (959)
Q Consensus 529 ~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIa 608 (959)
++||. +++||++||||.++|+.+|++|+.|+|+|||+||+|||++||||||
T Consensus 482 ~lGI~-----------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiA 532 (675)
T TIGR01497 482 EAGVD-----------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVA 532 (675)
T ss_pred HcCCC-----------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 99994 3799999999999999999999999999999999999999999999
Q ss_pred ecCchHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002151 609 VADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 663 (959)
Q Consensus 609 mg~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~~ 663 (959)
|++|+++|+++||++++||||+.|++++++||+++-+......|+++..++-.+.
T Consensus 533 m~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~ 587 (675)
T TIGR01497 533 MNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFA 587 (675)
T ss_pred eCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHH
Confidence 9999999999999999999999999999999999999999999999877765443
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-89 Score=790.11 Aligned_cols=655 Identities=24% Similarity=0.344 Sum_probs=501.4
Q ss_pred HHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhhCCCCCCchhhHHHHHH
Q 002151 26 VFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKENKILKFLGFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILA 105 (959)
Q Consensus 26 ~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~fl~~~~~~~~~~l~~aails~~~~~~~~~~~~~~~~~~I~~ 105 (959)
..+......+||+.+++.+|+..||+|.+..+.++.+..++++..||+ +++.+..+..|... .+|+.+..|++
T Consensus 150 ~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~Pf-YlFQ~fSv~lW~~d------~Y~~YA~cI~i 222 (1140)
T KOG0208|consen 150 WYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPF-YLFQAFSVALWLAD------SYYYYAFCIVI 222 (1140)
T ss_pred hhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchH-HHHHhHHhhhhhcc------cchhhhhHHHH
Confidence 344444457899999999999999999999999999999999999999 56665555544432 23444555666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCCCcEEEEeC-CCeeccceEEEecCceEEeccc
Q 002151 106 LLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKL-GDIIPADARLLEGDPLKIDQSA 184 (959)
Q Consensus 106 ~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l~~-Gd~VPaD~~ll~g~~l~Vdes~ 184 (959)
+.+.+...+.+|+++..+.++.+.+ ....++|+|||.|++|+++|||||||+.+.+ |-..|||++|++|++ -||||+
T Consensus 223 isv~Si~~sv~e~r~qs~rlr~mv~-~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNEsm 300 (1140)
T KOG0208|consen 223 ISVYSIVLSVYETRKQSIRLRSMVK-FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNESM 300 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-Eeeccc
Confidence 6677788889999988887776543 3468999999999999999999999999998 999999999999998 599999
Q ss_pred cCCCCceeecCCC-------------------Ccccccceeee------CeEEEEEEEeccchhhhhhhhhhcccCCCCc
Q 002151 185 LTGESLPVTKNPG-------------------DGVYSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVESTTHVGH 239 (959)
Q Consensus 185 LTGES~pv~K~~g-------------------~~v~aGt~v~~------G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~ 239 (959)
|||||.|+.|.+- +.+|+||.+.+ |.+.++|++||.+|..|++.+.+-.. ++.+
T Consensus 301 LTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyP-kP~~ 379 (1140)
T KOG0208|consen 301 LTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYP-KPVN 379 (1140)
T ss_pred ccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCC-CCcc
Confidence 9999999999873 35899999986 66999999999999999977655543 2333
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCceecc
Q 002151 240 FQQVLTSI--GNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKR 317 (959)
Q Consensus 240 l~~~~~~i--~~~~i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~ilvk~ 317 (959)
++-.-+.+ ..++.+ +++..++...+.+...+.+....+...+.++...+|+|||.++++...++..||.|+||+|.+
T Consensus 380 fkfyrds~~fi~~l~~-ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCis 458 (1140)
T KOG0208|consen 380 FKFYRDSFKFILFLVI-IALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCIS 458 (1140)
T ss_pred cHHHHHHHHHHHHHHH-HHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcC
Confidence 33333332 222211 222222222233344567788889999999999999999999999999999999999999999
Q ss_pred hhHHhhccCccEEeeCCCcceeeCceEEEEEEEeeec---C-------------------C-CCCH-HHHHHHHHHhccc
Q 002151 318 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVF---G-------------------N-GVDK-DMVILTAARASRL 373 (959)
Q Consensus 318 ~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~---~-------------------~-~~~~-~~~l~~aa~~~~~ 373 (959)
++.+...|++|++|||||||||++.+.+..+...... + + ...+ ..+....+.|+..
T Consensus 459 P~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL 538 (1140)
T KOG0208|consen 459 PQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSL 538 (1140)
T ss_pred ccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhcee
Confidence 9999999999999999999999999999876531000 0 0 0001 1223333444432
Q ss_pred c------cCChHHHHHHHHhc------------------------Cchh-----h----hccceEeEeecCCCCCceEEE
Q 002151 374 E------NQDAIDAAIVSMLA------------------------DPKE-----A----RAEITEVHFLPFNPTDKRTAL 414 (959)
Q Consensus 374 ~------~~~~i~~ai~~~~~------------------------~~~~-----~----~~~~~~l~~~pF~s~~kr~sv 414 (959)
. .+||+|..+.+..+ +|.+ . ...+.+++.+||+|.-+||||
T Consensus 539 ~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSV 618 (1140)
T KOG0208|consen 539 TLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSV 618 (1140)
T ss_pred EEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEE
Confidence 1 35676654433211 0100 0 114778899999999999999
Q ss_pred EEEec-CCeEEEEEeCCHHHHHHhhccchhHHHHHHHHHHHHHHccCeEEEEEEeecCCC--------CCCCCCCCceEE
Q 002151 415 TYTDK-NGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAG--------TKDSPGGPWEFI 485 (959)
Q Consensus 415 ~~~~~-~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~--------~~~~~e~~l~~l 485 (959)
++.++ +.+...|+|||||.|.++|.. +.+++.+++.++.|+.+|+|++|+|+|.++.. .++..|++|+|+
T Consensus 619 Iv~~~~e~~~~~ftKGaPE~I~~ic~p-~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~Fl 697 (1140)
T KOG0208|consen 619 IVSTGGEDKMMVFTKGAPESIAEICKP-ETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFL 697 (1140)
T ss_pred EEecCCCCceEeeccCCHHHHHHhcCc-ccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceee
Confidence 99864 467889999999999999975 46788899999999999999999999999865 367889999999
Q ss_pred EEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCC------------------------cc
Q 002151 486 GLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPS------------------------SA 541 (959)
Q Consensus 486 Gli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~------------------------~~ 541 (959)
|++.|++++|++++.+|++|++|+||++|+||||..||..+||+|||....... ..
T Consensus 698 GLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~ 777 (1140)
T KOG0208|consen 698 GLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQ 777 (1140)
T ss_pred EEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccc
Confidence 999999999999999999999999999999999999999999999996532100 00
Q ss_pred c-----------------------------cCccccc---cCCcchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEE
Q 002151 542 L-----------------------------LGEKKDT---IVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGM 589 (959)
Q Consensus 542 l-----------------------------~g~~~~~---~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m 589 (959)
. .|+...- ...+.+++++.+.+|||||+|+||.++|+.||+.|+.|+|
T Consensus 778 ~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vgf 857 (1140)
T KOG0208|consen 778 FLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGF 857 (1140)
T ss_pred cCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEe
Confidence 0 0000000 0112355667788999999999999999999999999999
Q ss_pred EcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002151 590 TGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTS 669 (959)
Q Consensus 590 ~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~~~~~~~~ 669 (959)
||||+|||.|||+|||||+++++. |.-||.+.-.-++.+.+++.|++||..+-.--..+.|...+.+......+++ .
T Consensus 858 CGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~L-Y 934 (1140)
T KOG0208|consen 858 CGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVFL-Y 934 (1140)
T ss_pred cCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhee-e
Confidence 999999999999999999998543 4448888888889999999999999988776666666655554433222211 1
Q ss_pred hccCCccHHHHHHHHHHhhhh-hcccc
Q 002151 670 IWEFDFPPFMVLIIAILNDGT-IMTIS 695 (959)
Q Consensus 670 ~~~~~~~p~~il~i~~~~d~~-~~~l~ 695 (959)
.-+..+..+|.+.+.++-..+ +..++
T Consensus 935 ~~~~nl~D~Qfl~iDLlii~pia~~m~ 961 (1140)
T KOG0208|consen 935 LINSNLGDLQFLFIDLLIITPIAVMMS 961 (1140)
T ss_pred eecccccchhhhhhHHHHHHHHHHHHc
Confidence 124567888888888766544 34444
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-87 Score=791.70 Aligned_cols=503 Identities=28% Similarity=0.416 Sum_probs=432.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEE-CCeEEEEecCCcCCCcEEEEeCCCeeccceEEEecC
Q 002151 98 HDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLR-DGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGD 176 (959)
Q Consensus 98 ~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~R-dG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~ 176 (959)
.+.+.++++++++..++.+...++.+++++|+++.|.++++++ ||++++||.++|+|||+|.++|||+||+||++++|+
T Consensus 175 ~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~ 254 (713)
T COG2217 175 EEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGS 254 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCc
Confidence 5566777777788778888888899999999999999997776 566999999999999999999999999999999999
Q ss_pred ceEEeccccCCCCceeecCCCCcccccceeeeCeEEEEEEEeccchhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHH
Q 002151 177 PLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST-THVGHFQQVLTSIGNFCICSI 255 (959)
Q Consensus 177 ~l~Vdes~LTGES~pv~K~~g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~i~~i 255 (959)
+ .||||+|||||.||.|.+||.||+||.+.+|..+..|+++|.+|.+++|.++++++ .+++|.|+.++++..++...+
T Consensus 255 s-~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~v 333 (713)
T COG2217 255 S-SVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVV 333 (713)
T ss_pred E-EeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHH
Confidence 8 89999999999999999999999999999999999999999999999999999998 788999999999998876644
Q ss_pred HHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCceecchhHHhhccCccEEeeCCC
Q 002151 256 AIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKT 335 (959)
Q Consensus 256 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~ilvk~~~~iE~Lg~v~~i~~DKT 335 (959)
.+..++.+++++.....+|..++..++++++++|||||.++.|++...|..+.+++|+++|+.+++|+++++|+++||||
T Consensus 334 l~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKT 413 (713)
T COG2217 334 LVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKT 413 (713)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCC
Confidence 44444434433333335788899999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhcccccCChHHHHHHHHhcCchhhhccceEeEeecCCCCCceEEEE
Q 002151 336 GTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALT 415 (959)
Q Consensus 336 GTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~ 415 (959)
||||+|+|+|.++. ... + ++++++.+++..+..+ +||+..|+++++.+.. ....+..+.+| . +-...
T Consensus 414 GTLT~G~p~v~~v~---~~~-~-~e~~~L~laAalE~~S-~HPiA~AIv~~a~~~~--~~~~~~~~~i~---G-~Gv~~- 480 (713)
T COG2217 414 GTLTEGKPEVTDVV---ALD-G-DEDELLALAAALEQHS-EHPLAKAIVKAAAERG--LPDVEDFEEIP---G-RGVEA- 480 (713)
T ss_pred CCCcCCceEEEEEe---cCC-C-CHHHHHHHHHHHHhcC-CChHHHHHHHHHHhcC--CCCccceeeec---c-CcEEE-
Confidence 99999999999976 333 3 7888998888877654 4699999998754322 11111122332 1 11111
Q ss_pred EEecCCeEEEEEeCCHHHHHHhhccchhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeecCCCCC
Q 002151 416 YTDKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPR 495 (959)
Q Consensus 416 ~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l~D~lr 495 (959)
..+|+ .+.-|++..+.+.-. +... ..+..+.+.++|..++.++.+. +++|+++++|++|
T Consensus 481 --~v~g~--~v~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~R 539 (713)
T COG2217 481 --EVDGE--RVLVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADELR 539 (713)
T ss_pred --EECCE--EEEEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCCC
Confidence 12564 345599987765321 1111 4566778889999999999876 8999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHH
Q 002151 496 HDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFE 575 (959)
Q Consensus 496 ~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~ 575 (959)
||++++|++||+.||++.|+||||+.+|.+||+++||. +++|.+.||||.+
T Consensus 540 ~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId-----------------------------~v~AellPedK~~ 590 (713)
T COG2217 540 PDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID-----------------------------EVRAELLPEDKAE 590 (713)
T ss_pred hhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH-----------------------------hheccCCcHHHHH
Confidence 99999999999999999999999999999999999994 4799999999999
Q ss_pred HHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002151 576 IVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 655 (959)
Q Consensus 576 iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~ 655 (959)
+|+.||++|++|+|+|||+||+|||++||||||||+|||+|+++||++|++|+++.++.+++.+|+++++||+|+.|++.
T Consensus 591 ~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~ 670 (713)
T COG2217 591 IVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFG 670 (713)
T ss_pred HHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 002151 656 ITIRIVLGF 664 (959)
Q Consensus 656 ~ni~~v~~~ 664 (959)
+|...+...
T Consensus 671 yn~~~iplA 679 (713)
T COG2217 671 YNAIAIPLA 679 (713)
T ss_pred HHHHHHHHH
Confidence 998665443
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-81 Score=765.10 Aligned_cols=499 Identities=26% Similarity=0.367 Sum_probs=434.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCCCcEEEEeCCCeeccceEEEec
Q 002151 96 DYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEG 175 (959)
Q Consensus 96 ~~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g 175 (959)
.|.+.+.++++++++..++.++++|+++.+++|+++.|++++|+|||++++|++++|+|||+|.+++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 57788888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEeccccCCCCceeecCCCCcccccceeeeCeEEEEEEEeccchhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHH
Q 002151 176 DPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST-THVGHFQQVLTSIGNFCICS 254 (959)
Q Consensus 176 ~~l~Vdes~LTGES~pv~K~~g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~i~~ 254 (959)
+. .||||+|||||.|+.|++||.||+||.+.+|.++++|+++|.+|.+|||.++++++ .+++|+|+.++++++++...
T Consensus 285 ~~-~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 FA-SFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred cE-EeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 86 89999999999999999999999999999999999999999999999999999987 67899999999999987654
Q ss_pred HHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCceecchhHHhhccCccEEeeCC
Q 002151 255 IAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 334 (959)
Q Consensus 255 i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~ilvk~~~~iE~Lg~v~~i~~DK 334 (959)
+.+..++.+++++.....+|..++...+++++++|||+|.++.+++...+..+++|+|+++|+.+++|+|+++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 44444443333334445677788889999999999999999999999999999999999999999999999999999999
Q ss_pred CcceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhcccccCChHHHHHHHHhcCchhhhccceEeEeecCCCCCceEEE
Q 002151 335 TGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTAL 414 (959)
Q Consensus 335 TGTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv 414 (959)
|||||+|+|+|.++. .+ ++.++++++.+++..+. .+.||++.|+++++.+. +. .+||.++.+.+.-
T Consensus 444 TGTLT~g~~~v~~~~---~~-~~~~~~~~l~~aa~~e~-~s~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g 509 (741)
T PRK11033 444 TGTLTEGKPQVTDIH---PA-TGISESELLALAAAVEQ-GSTHPLAQAIVREAQVR-----GL----AIPEAESQRALAG 509 (741)
T ss_pred CCCCcCCceEEEEEE---ec-CCCCHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhc-----CC----CCCCCcceEEEee
Confidence 999999999999865 22 25667777777765543 35689999999875421 11 2467666665532
Q ss_pred E-EE-ecCCeEEEEEeCCHHHHHHhhccchhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeecCC
Q 002151 415 T-YT-DKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFD 492 (959)
Q Consensus 415 ~-~~-~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l~D 492 (959)
. ++ ..+|+.+. .|+++.+.+ ..+.+.+.++++.++|+|+++++++. +++|+++++|
T Consensus 510 ~Gv~~~~~g~~~~--ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d 567 (741)
T PRK11033 510 SGIEGQVNGERVL--ICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQD 567 (741)
T ss_pred EEEEEEECCEEEE--Eecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEec
Confidence 1 22 23565443 589988754 11234455678899999999999864 8999999999
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++|||++++|++|+++|++++|+|||+..+|.++|+++||. .++++.|+|
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~------------------------------~~~~~~p~~ 617 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID------------------------------FRAGLLPED 617 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC------------------------------eecCCCHHH
Confidence 99999999999999999999999999999999999999993 357889999
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 652 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~ 652 (959)
|.++|+.||+. +.|+|+|||+||+|||++|||||+||+|+|+++++||+++++++++.++.++++||++++||++|+.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 002151 653 AVSITIRIVL 662 (959)
Q Consensus 653 ~l~~ni~~v~ 662 (959)
++.+|+..+.
T Consensus 697 a~~~n~~~i~ 706 (741)
T PRK11033 697 ALGLKAIFLV 706 (741)
T ss_pred HHHHHHHHHH
Confidence 9999975443
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-84 Score=785.23 Aligned_cols=796 Identities=17% Similarity=0.198 Sum_probs=585.0
Q ss_pred HHhhcCCCccCcccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 002151 45 RLEVFGHNKLEEKKENKI----LKFLGFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENN 120 (959)
Q Consensus 45 r~~~~G~N~i~~~~~~~~----~~fl~~~~~~~~~~l~~aails~~~~~~~~~~~~~~~~~~I~~~l~i~~~~~~~~e~~ 120 (959)
+...|-.|++...|++.+ +.+++||.++-+.+|++.++++++... +...|...+.+++++.++++.+.+++++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~---~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLS---PFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCccc---ccCccceeeceeeeehHHHHHHHHhhhh
Confidence 555999999999998765 678999999999999999999988732 2245677788888899999999999999
Q ss_pred HHHHHHHHHhccCCeEEEEECCe-EEEEecCCcCCCcEEEEeCCCeeccceEEEecCc----eEEeccccCCCCceeecC
Q 002151 121 AGNAAAALMARLAPKAKVLRDGK-WSEEDASVLVPGDIISIKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKN 195 (959)
Q Consensus 121 a~~~~~~L~~~~~~~~~V~RdG~-~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~----l~Vdes~LTGES~pv~K~ 195 (959)
+.+.....+ ..++.|.|++. +++..|++|++||+|.+..++.+|||.+|++++. |+|++++|+||++.+.|+
T Consensus 105 R~~~D~~iN---~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKEVN---NRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHHhh---cceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 998776554 56889998644 8999999999999999999999999999997552 799999999999998885
Q ss_pred C-----------------------------------------------CCcccccceeeeCe-EEEEEEEeccchhhhhh
Q 002151 196 P-----------------------------------------------GDGVYSGSTCKQGE-IEAVVIATGVHTFFGKA 227 (959)
Q Consensus 196 ~-----------------------------------------------g~~v~aGt~v~~G~-~~~~V~~tG~~T~~gki 227 (959)
. .+.++.|+.+++.. +.++|+.||.+|++++-
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 3 12477889998865 88999999999988653
Q ss_pred hhhhcccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH--hHhc------------ccc----chHHHHHHHHHHHHhhc
Q 002151 228 AHLVESTTHVGHFQQVLTSIGNFCICSIAIGMIIEIII--IYGH------------QER----GYRVGIDNLLVILIGGI 289 (959)
Q Consensus 228 ~~l~~~~~~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~--~~~~------------~~~----~~~~~~~~~l~llv~~i 289 (959)
... ...+++.+++.++.+...+++.+...+++..+. .|.. ... .....+..+++++...+
T Consensus 262 ~~~--~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 SGK--PPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred cCC--CccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 322 336778889988887665444333333222221 1111 000 01122455677888999
Q ss_pred CCcchHHHHHHHHHHHHHhh----------hCCceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeee-cCCCC
Q 002151 290 PIAMPTVLSVTMAIGSHRLS----------QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVV-FGNGV 358 (959)
Q Consensus 290 P~aLp~~~~v~l~~~~~~l~----------k~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~-~~~~~ 358 (959)
|++|++.+.+....++..+. ...+.+|+.+..|+||++++|++|||||||+|.|++.+|.+++. |+...
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 99999999999988874432 34788999999999999999999999999999999999987541 11111
Q ss_pred C------------------------------------------HHHHHHHHHHhcc-------------cccCChHHHHH
Q 002151 359 D------------------------------------------KDMVILTAARASR-------------LENQDAIDAAI 383 (959)
Q Consensus 359 ~------------------------------------------~~~~l~~aa~~~~-------------~~~~~~i~~ai 383 (959)
+ ........+.|.. ++.++|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 0 0112233333321 12246888888
Q ss_pred HHHhcCchh----------------hhccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhc-cchhHHH
Q 002151 384 VSMLADPKE----------------ARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAW-NKADIEK 446 (959)
Q Consensus 384 ~~~~~~~~~----------------~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~-~~~~~~~ 446 (959)
+..+++.+- ....|+.++.+||+|.||||||++++++|+..++||||+.+|.+++. +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 877543211 13578999999999999999999999999999999999999999998 5567788
Q ss_pred HHHHHHHHHHHccCeEEEEEEeecCCCC-------------------------CCCCCCCceEEEEeecCCCCCcchHHH
Q 002151 447 KVHSVIDKFAERGLRSLGVARQEVPAGT-------------------------KDSPGGPWEFIGLLPLFDPPRHDSAET 501 (959)
Q Consensus 447 ~~~~~i~~~a~~Glr~l~vA~~~~~~~~-------------------------~~~~e~~l~~lGli~l~D~lr~~v~ea 501 (959)
+..+++++|+.+|+|+|++|||++++++ .+.+|++|+++|.+++||++++||||+
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 8899999999999999999999998764 246799999999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCcc----------------------------------------
Q 002151 502 IRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSA---------------------------------------- 541 (959)
Q Consensus 502 I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~---------------------------------------- 541 (959)
|+.|++||||+||+|||+.+||.+||.+|++..+......
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 9999999999999999999999999999999765322111
Q ss_pred -----ccCccccccCCc----chHHHHh--hcCceeecChhhHHHHHHHHhh-CCCEEEEEcCCcCChhhhhcCCeeEEe
Q 002151 542 -----LLGEKKDTIVGL----PVDDLIE--KADGFAGVFPEHKFEIVKRLQA-RKHIVGMTGDGVNDAPALKVADIGIAV 609 (959)
Q Consensus 542 -----l~g~~~~~~~~~----~~~~~i~--~~~vfar~~Pe~K~~iV~~Lq~-~g~~V~m~GDGvNDapALk~AdVGIam 609 (959)
+.|+.+....+. .+-++.. +..+|||++|.||+.+|+..++ .+.+++++|||+||++|+++|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 111111111111 1111222 2348999999999999999974 488999999999999999999999999
Q ss_pred c--CchHHHHhhccccccCCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc----cHHHHHH
Q 002151 610 A--DSTDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTSIWEFDF----PPFMVLI 682 (959)
Q Consensus 610 g--~gtd~Ak~aADivL~~~~~~~I~~ai-~~gR~~~~~i~~~~~~~l~~ni~~v~~~~~~~~~~~~~~----~p~~il~ 682 (959)
+ +|.+|++ +||+.+.+ |+.+-+++ .+||+.|.|+.+++.|.+++|+...++.+++.++.+|.. .++.+.+
T Consensus 820 sG~EGmQAvm-sSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~l 896 (1151)
T KOG0206|consen 820 SGQEGMQAVM-SSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSL 896 (1151)
T ss_pred ccchhhhhhh-cccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEE
Confidence 5 6777766 99999966 55555554 579999999999999999999999999999988877644 4455556
Q ss_pred HHHHh-hhhhccccc-CCCCCC----CCC--------CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc
Q 002151 683 IAILN-DGTIMTISK-DRVKPS----PSP--------DSWKLREIFATGVVIGSYLALTTVIFFWAIFETDFFQNHFHVQ 748 (959)
Q Consensus 683 i~~~~-d~~~~~l~~-d~~~~~----~~p--------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 748 (959)
+|++. .++++.++. |+..+. +.| +.....+.|+.+++.|++.++++|++++..+... .....|..
T Consensus 897 yNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~-~~~~~G~~ 975 (1151)
T KOG0206|consen 897 YNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQ-AVTSNGLT 975 (1151)
T ss_pred EeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhheee-eeccCCCc
Confidence 66443 445577763 433221 111 1222346778888999999999998777665321 11111111
Q ss_pred cccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcccChhHHHHHHHHHHHHHHHH--HHhhcc----ccc
Q 002151 749 SLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIFVTRSRGWSFTERPGLLLVTAFIIAQLVATL--ISALAT----SDF 822 (959)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~----~~~ 822 (959)
.+ .+.+..++|..+++..++. ....+++|.|+++..+|+.+++.+....... .+...+ .++
T Consensus 976 ---~d---------~~~~G~~~~T~~Vivv~~~-iaL~~~ywT~i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~ 1042 (1151)
T KOG0206|consen 976 ---AD---------YWTLGTTVFTIIVIVVNLK-IALETSYWTWINHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGV 1042 (1151)
T ss_pred ---CC---------hhhccceEEEEEEEEEEee-eeeeehheeHHHHHHHHHHHHHHHHHHHHHhccccccCCCccHHHH
Confidence 01 2333344443333322222 4456678999888888887776654322211 111111 222
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHHHHhHhhccchhhHH
Q 002151 823 AGIHKIGWRWTSIIWLYNIIIYMLLDPIKVAVGYALSGRAWSL 865 (959)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~ 865 (959)
.........+|+++++..+..++|+-++|.+.+..+|...+..
T Consensus 1043 ~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i 1085 (1151)
T KOG0206|consen 1043 AEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDII 1085 (1151)
T ss_pred HHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHH
Confidence 3333445567888889999999999999999999999754433
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-81 Score=729.88 Aligned_cols=542 Identities=24% Similarity=0.337 Sum_probs=449.2
Q ss_pred CCchhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCe-EEEEecCCcCCCcEEEEeCCCeeccceE
Q 002151 94 DVDYHDFV-GILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGK-WSEEDASVLVPGDIISIKLGDIIPADAR 171 (959)
Q Consensus 94 ~~~~~~~~-~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~-~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ 171 (959)
+..|+|.. +++.++.+...++.....++..++..|++..|.++.++.+|+ .++||.+.|++||+|.++||++||+||+
T Consensus 337 ~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~ 416 (951)
T KOG0207|consen 337 PPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGV 416 (951)
T ss_pred cchhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccE
Confidence 44555543 444455666666666677788888999999999999999996 8999999999999999999999999999
Q ss_pred EEecCceEEeccccCCCCceeecCCCCcccccceeeeCeEEEEEEEeccchhhhhhhhhhccc-CCCCcHHHHHHHHHHH
Q 002151 172 LLEGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST-THVGHFQQVLTSIGNF 250 (959)
Q Consensus 172 ll~g~~l~Vdes~LTGES~pv~K~~g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~ 250 (959)
+++|++ +||||.+|||++||.|++|+.|.+||++.+|.....++++|.+|.+++|.+|++++ ..++|+|+.+|+++.+
T Consensus 417 Vv~Gss-~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~y 495 (951)
T KOG0207|consen 417 VVDGSS-EVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGY 495 (951)
T ss_pred EEeCce-eechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhc
Confidence 999998 89999999999999999999999999999999999999999999999999999998 7889999999999988
Q ss_pred HHHHHHHHHHHHHHHhHhccc----------cchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCceecchhH
Q 002151 251 CICSIAIGMIIEIIIIYGHQE----------RGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTA 320 (959)
Q Consensus 251 ~i~~i~i~~~~~~~~~~~~~~----------~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~ilvk~~~~ 320 (959)
+...+++..++.++++..... ..+..++...+++++++|||+|.++.|++...|....+++|+++|..++
T Consensus 496 FvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~ 575 (951)
T KOG0207|consen 496 FVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEA 575 (951)
T ss_pred CCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHH
Confidence 654443333332222221111 3455667788899999999999999999999999999999999999999
Q ss_pred HhhccCccEEeeCCCcceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhcccccCChHHHHHHHHhcCchhhhccceEe
Q 002151 321 IEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEV 400 (959)
Q Consensus 321 iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l 400 (959)
+|.+.++++++||||||||+|+++|.++. ...+..+..+++.+++..+. ...||+..|++.++.............
T Consensus 576 LE~~hkv~tVvFDKTGTLT~G~~~V~~~~---~~~~~~~~~e~l~~v~a~Es-~SeHPig~AIv~yak~~~~~~~~~~~~ 651 (951)
T KOG0207|consen 576 LEKAHKVKTVVFDKTGTLTEGKPTVVDFK---SLSNPISLKEALALVAAMES-GSEHPIGKAIVDYAKEKLVEPNPEGVL 651 (951)
T ss_pred HHHHhcCCEEEEcCCCceecceEEEEEEE---ecCCcccHHHHHHHHHHHhc-CCcCchHHHHHHHHHhcccccCccccc
Confidence 99999999999999999999999999977 45544666777666655544 345799999999976543111111122
Q ss_pred EeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhccchhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCCCCCCC
Q 002151 401 HFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGG 480 (959)
Q Consensus 401 ~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~ 480 (959)
++-.|....+...+. .+|+. +.-|.-+.+...-. ...+.+...+++....|..+.++++..
T Consensus 652 ~~~~~pg~g~~~~~~---~~~~~--i~iGN~~~~~r~~~---~~~~~i~~~~~~~e~~g~tvv~v~vn~----------- 712 (951)
T KOG0207|consen 652 SFEYFPGEGIYVTVT---VDGNE--VLIGNKEWMSRNGC---SIPDDILDALTESERKGQTVVYVAVNG----------- 712 (951)
T ss_pred eeecccCCCcccceE---EeeeE--EeechHHHHHhcCC---CCchhHHHhhhhHhhcCceEEEEEECC-----------
Confidence 222232222221111 23443 56688888765322 234457777888889999999999987
Q ss_pred CceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHh
Q 002151 481 PWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIE 560 (959)
Q Consensus 481 ~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~ 560 (959)
+++|++.++|++|||+..+|+.||+.||++.|+||||..+|.++|+++|+.
T Consensus 713 --~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~--------------------------- 763 (951)
T KOG0207|consen 713 --QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID--------------------------- 763 (951)
T ss_pred --EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc---------------------------
Confidence 999999999999999999999999999999999999999999999999974
Q ss_pred hcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHHHH
Q 002151 561 KADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSR 640 (959)
Q Consensus 561 ~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~gR 640 (959)
+|+|.+.|+||.++|+.+|++|+.|+|+|||+||+|||.+|||||+||.|+|+|.|+|||||+.+|+..++.++..+|
T Consensus 764 --~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSr 841 (951)
T KOG0207|consen 764 --NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSR 841 (951)
T ss_pred --eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccHHHHHHHHHHhhhh
Q 002151 641 AIFQRMKNYTIYAVSITIRIVLGFLLLTSIWEFDFPPFMVLIIAILNDGT 690 (959)
Q Consensus 641 ~~~~~i~~~~~~~l~~ni~~v~~~~~~~~~~~~~~~p~~il~i~~~~d~~ 690 (959)
++++|+|.|+.|++.+|+..+....+.++.|++.++|++--....++...
T Consensus 842 kt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSvs 891 (951)
T KOG0207|consen 842 KTVKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSVS 891 (951)
T ss_pred HHHhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhHH
Confidence 99999999999999999987777777777777778888765555555443
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-78 Score=719.77 Aligned_cols=474 Identities=35% Similarity=0.542 Sum_probs=414.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCeEEEEECCeEEEEecCCcCCCcEEEEeCCCeeccceEEEecCceEEe
Q 002151 104 LALLIINSTISFIEENNAGNAAAALMA--RLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKID 181 (959)
Q Consensus 104 ~~~l~i~~~~~~~~e~~a~~~~~~L~~--~~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~l~Vd 181 (959)
+++++++.+++.+++++++++.++|++ ..+++++|+||| +++|++++|+|||+|.+++||+|||||+|++|++ .||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~-~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC-FVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE-EEE
Confidence 345677888999999999999999998 778899999999 9999999999999999999999999999999975 899
Q ss_pred ccccCCCCceeecCCCCcccccceeeeCeEEEEEEEeccchhhhhhhhhhccc-CCCCcHHHHHHHHH-HHHHHHHHHHH
Q 002151 182 QSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST-THVGHFQQVLTSIG-NFCICSIAIGM 259 (959)
Q Consensus 182 es~LTGES~pv~K~~g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~-~~~i~~i~i~~ 259 (959)
||+|||||.|+.|.+||.+++||.+.+|+.++.|+++|.+|..+++..++.+. ..++++++..+++. .+++..+++..
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877 44788899999998 45443332222
Q ss_pred HHHHHHhHhcccc--chHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCceecchhHHhhccCccEEeeCCCcc
Q 002151 260 IIEIIIIYGHQER--GYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 337 (959)
Q Consensus 260 ~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~ilvk~~~~iE~Lg~v~~i~~DKTGT 337 (959)
++.+++++..... +|...+..++++++++|||+||+++++++..+..+|+++|+++|+++++|+||+++++|||||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 2222222111112 36778899999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhcccccCChHHHHHHHHhcCchhhhccceEeEeecCCCCCceEEEEEE
Q 002151 338 LTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYT 417 (959)
Q Consensus 338 LT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~ 417 (959)
||+|+|+|.++... + + .....||++.|+++++.. +.++..||++.+++|++++.
T Consensus 241 LT~~~~~v~~~~~~---~-~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~ 294 (499)
T TIGR01494 241 LTKNEMSFKKVSVL---G-G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVR 294 (499)
T ss_pred cccCceEEEEEEec---C-C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEe
Confidence 99999999987621 1 1 123568999999887642 12356799999999998887
Q ss_pred ecCCeEEEEEeCCHHHHHHhhccchhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeecCCCCCcc
Q 002151 418 DKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHD 497 (959)
Q Consensus 418 ~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l~D~lr~~ 497 (959)
..++ .++||+++.+.+.|.. +.+.+++++++|+|++++|++. +++|++.++|++|+|
T Consensus 295 ~~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~ 351 (499)
T TIGR01494 295 GPDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDD 351 (499)
T ss_pred cCCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchh
Confidence 5333 4789999999998852 2334556888999999999876 799999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHH
Q 002151 498 SAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIV 577 (959)
Q Consensus 498 v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV 577 (959)
++++|+.|+++|++++|+|||++.+|..+|+++|| +|+++|+||.++|
T Consensus 352 ~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi--------------------------------~~~~~p~~K~~~v 399 (499)
T TIGR01494 352 AKETISELREAGIRVIMLTGDNVLTAKAIAKELGI--------------------------------FARVTPEEKAALV 399 (499)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc--------------------------------eeccCHHHHHHHH
Confidence 99999999999999999999999999999999986 5899999999999
Q ss_pred HHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002151 578 KRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 657 (959)
Q Consensus 578 ~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~~n 657 (959)
+.+|+.|+.|+|+|||+||+|||++|||||||+ |+++||++|+++++..++.++.+||++++++++++.|++++|
T Consensus 400 ~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n 474 (499)
T TIGR01494 400 EALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYN 474 (499)
T ss_pred HHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 799999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 002151 658 IRIVLGFL 665 (959)
Q Consensus 658 i~~v~~~~ 665 (959)
+..++..+
T Consensus 475 ~~~~~~a~ 482 (499)
T TIGR01494 475 LILIPLAA 482 (499)
T ss_pred HHHHHHHH
Confidence 87655443
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-77 Score=709.23 Aligned_cols=498 Identities=29% Similarity=0.416 Sum_probs=424.3
Q ss_pred HHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCCC
Q 002151 76 VMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPG 155 (959)
Q Consensus 76 ~l~~aails~~~~~~~~~~~~~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~G 155 (959)
++.++++++++.+ +|+++++|+++++++..+++++++|+.+.+++|++..+++++|+|||+++++++++|+||
T Consensus 4 l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 4 LMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCC
Confidence 4556677777663 799999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeCCCeeccceEEEecCceEEeccccCCCCceeecCCCCcccccceeeeCeEEEEEEEeccchhhhhhhhhhccc-
Q 002151 156 DIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST- 234 (959)
Q Consensus 156 DiI~l~~Gd~VPaD~~ll~g~~l~Vdes~LTGES~pv~K~~g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~- 234 (959)
|+|.+++||+|||||++++|+. .||||+|||||.|+.|++||.+|+||.+.+|+++++|++||.+|.+|++.+++++.
T Consensus 77 Div~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~ 155 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQ 155 (536)
T ss_pred CEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHh
Confidence 9999999999999999999987 89999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCce
Q 002151 235 THVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 314 (959)
Q Consensus 235 ~~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~il 314 (959)
.+++++|+.++++++++...++++.++.+++.+.. . .+..++..++++++++|||+||+++++++..+..+++|+|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gil 233 (536)
T TIGR01512 156 SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLL-K-RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGIL 233 (536)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c-ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeE
Confidence 67889999999998876554444343333333322 2 223367778899999999999999999999999999999999
Q ss_pred ecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhcccccCChHHHHHHHHhcCchhhh
Q 002151 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEAR 394 (959)
Q Consensus 315 vk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~ 394 (959)
+|+++++|++|+++++|||||||||+|+|+|.++. . .+++.+++..+ ..+.||++.|+++++.+.+
T Consensus 234 ik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~---~-------~~~l~~a~~~e-~~~~hp~~~Ai~~~~~~~~--- 299 (536)
T TIGR01512 234 IKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVV---P-------AEVLRLAAAAE-QASSHPLARAIVDYARKRE--- 299 (536)
T ss_pred EcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEee---H-------HHHHHHHHHHh-ccCCCcHHHHHHHHHHhcC---
Confidence 99999999999999999999999999999999864 1 25666665443 3456899999998764321
Q ss_pred ccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhccchhHHHHHHHHHHHHHHccCeEEEEEEeecCCCC
Q 002151 395 AEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGT 474 (959)
Q Consensus 395 ~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~ 474 (959)
.....+.+|. +..... .+|+.+ ..|+++.+.+.. .+.+..+|.+++.++++.
T Consensus 300 -~~~~~~~~~g----~gi~~~---~~g~~~--~ig~~~~~~~~~-------------~~~~~~~~~~~~~v~~~~----- 351 (536)
T TIGR01512 300 -NVESVEEVPG----EGVRAV---VDGGEV--RIGNPRSLEAAV-------------GARPESAGKTIVHVARDG----- 351 (536)
T ss_pred -CCcceEEecC----CeEEEE---ECCeEE--EEcCHHHHhhcC-------------CcchhhCCCeEEEEEECC-----
Confidence 1222222221 111111 245433 458887653321 014567888888887643
Q ss_pred CCCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCC-eEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCc
Q 002151 475 KDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGV-SVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGL 553 (959)
Q Consensus 475 ~~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI-~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~ 553 (959)
+++|.+.++|++|||++++|++|+++|+ ++.|+|||+..+|..+++++|+.
T Consensus 352 --------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~-------------------- 403 (536)
T TIGR01512 352 --------TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID-------------------- 403 (536)
T ss_pred --------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh--------------------
Confidence 8999999999999999999999999999 99999999999999999999994
Q ss_pred chHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEec-CchHHHHhhccccccCCCchHH
Q 002151 554 PVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVA-DSTDAARSASDIVLTEPGLSVI 632 (959)
Q Consensus 554 ~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~aADivL~~~~~~~I 632 (959)
++|+++.|++|.++++.++++++.|+|+|||.||+||+++||+||++| +|++.++++||+++++++++.+
T Consensus 404 ---------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l 474 (536)
T TIGR01512 404 ---------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRL 474 (536)
T ss_pred ---------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence 358899999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002151 633 ISAVLTSRAIFQRMKNYTIYAVSITIRIVL 662 (959)
Q Consensus 633 ~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~ 662 (959)
.+++.+||++++|+++++.|++.+|+..+.
T Consensus 475 ~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~ 504 (536)
T TIGR01512 475 PQAIRLARRTRRIVKQNVVIALGIILLLIL 504 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999976443
|
. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-76 Score=706.93 Aligned_cols=517 Identities=26% Similarity=0.384 Sum_probs=432.5
Q ss_pred HHHHHHHHHHHHhhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECC-eEEEEecCCcCC
Q 002151 76 VMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDG-KWSEEDASVLVP 154 (959)
Q Consensus 76 ~l~~aails~~~~~~~~~~~~~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG-~~~~i~~~~Lv~ 154 (959)
++.++++++++.+ .|.+++.|+++++++..+++++++++++.+++|.+..+++++|+||| ++++|++++|+|
T Consensus 4 l~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~ 76 (556)
T TIGR01525 4 LMALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQV 76 (556)
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCC
Confidence 3445556666653 78899999999999999999999999999999999999999999996 999999999999
Q ss_pred CcEEEEeCCCeeccceEEEecCceEEeccccCCCCceeecCCCCcccccceeeeCeEEEEEEEeccchhhhhhhhhhccc
Q 002151 155 GDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST 234 (959)
Q Consensus 155 GDiI~l~~Gd~VPaD~~ll~g~~l~Vdes~LTGES~pv~K~~g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~ 234 (959)
||+|.+++||+|||||+|++|+. .||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|.+|++.+++++.
T Consensus 77 GDiv~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~ 155 (556)
T TIGR01525 77 GDIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEA 155 (556)
T ss_pred CCEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHH
Confidence 99999999999999999999986 89999999999999999999999999999999999999999999999999999876
Q ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCc
Q 002151 235 -THVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGA 313 (959)
Q Consensus 235 -~~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~i 313 (959)
.+++++|+.++++.+++...++++.++.+++.+ ..... ..+..++++++++|||+||++++++++.+.++|+++|+
T Consensus 156 ~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~-~~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gi 232 (556)
T TIGR01525 156 QSSKAPIQRLADRIASYYVPAVLAIALLTFVVWL-ALGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGI 232 (556)
T ss_pred hhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCc
Confidence 678999999999988765544333333333322 22222 67788899999999999999999999999999999999
Q ss_pred eecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeeecCCCCC--HHHHHHHHHHhcccccCChHHHHHHHHhcCch
Q 002151 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVD--KDMVILTAARASRLENQDAIDAAIVSMLADPK 391 (959)
Q Consensus 314 lvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~--~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~ 391 (959)
++|+++++|+||++|++|||||||||+|+|+|.++. ... +.+ +++++.+++.++. ...||++.|+++++....
T Consensus 233 lvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~---~~~-~~~~~~~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~~~ 307 (556)
T TIGR01525 233 LIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVE---PLD-DASISEEELLALAAALEQ-SSSHPLARAIVRYAKKRG 307 (556)
T ss_pred eecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEE---ecC-CCCccHHHHHHHHHHHhc-cCCChHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999875 222 233 5667776665554 356799999998864321
Q ss_pred hhhccce-EeEeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhccchhHHHHHHHHHHHHHHccCeEEEEEEeec
Q 002151 392 EARAEIT-EVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEV 470 (959)
Q Consensus 392 ~~~~~~~-~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~ 470 (959)
..... + ..+++| .+..... .+|. ..+..|+++.+ + +.. .+. ......+++++++|+|+++++++.
T Consensus 308 ~~~~~-~~~~~~~~----~~gi~~~---~~g~-~~~~lg~~~~~-~-~~~-~~~-~~~~~~~~~~~~~g~~~~~v~~~~- 373 (556)
T TIGR01525 308 LELPK-QEDVEEVP----GKGVEAT---VDGQ-EEVRIGNPRLL-E-LAA-EPI-SASPDLLNEGESQGKTVVFVAVDG- 373 (556)
T ss_pred CCccc-ccCeeEec----CCeEEEE---ECCe-eEEEEecHHHH-h-hcC-CCc-hhhHHHHHHHhhCCcEEEEEEECC-
Confidence 10000 1 111111 1122222 1342 23456888866 2 111 111 223455667889999999999754
Q ss_pred CCCCCCCCCCCceEEEEeecCCCCCcchHHHHHHHHhCC-CeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccc
Q 002151 471 PAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLG-VSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDT 549 (959)
Q Consensus 471 ~~~~~~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aG-I~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~ 549 (959)
+++|.+.++|++|||++++|++|+++| +++.|+|||+..++.++++++|+.
T Consensus 374 ------------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~---------------- 425 (556)
T TIGR01525 374 ------------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID---------------- 425 (556)
T ss_pred ------------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC----------------
Confidence 899999999999999999999999999 999999999999999999999994
Q ss_pred cCCcchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCc
Q 002151 550 IVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGL 629 (959)
Q Consensus 550 ~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~ 629 (959)
++|+++.|++|.++++.+|+.|+.|+|+|||.||+||+++|||||++|++++.++++||+++.++++
T Consensus 426 -------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~ 492 (556)
T TIGR01525 426 -------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDL 492 (556)
T ss_pred -------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCH
Confidence 3689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002151 630 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 663 (959)
Q Consensus 630 ~~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~~ 663 (959)
+.++.++++||++++||++++.|++.+|+..+..
T Consensus 493 ~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~ 526 (556)
T TIGR01525 493 SSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPL 526 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999876543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-76 Score=705.14 Aligned_cols=506 Identities=28% Similarity=0.409 Sum_probs=420.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEC-CeEEEEecCCcCCCcEEEEeCCCeeccceEEEe
Q 002151 96 DYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRD-GKWSEEDASVLVPGDIISIKLGDIIPADARLLE 174 (959)
Q Consensus 96 ~~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~Rd-G~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~ 174 (959)
+|.....++++++++..++.+.++++++++++|++..|.+++++|+ |++++|++++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 3444455566667777888888889999999999999999999985 677999999999999999999999999999999
Q ss_pred cCceEEeccccCCCCceeecCCCCcccccceeeeCeEEEEEEEeccchhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHH
Q 002151 175 GDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST-THVGHFQQVLTSIGNFCIC 253 (959)
Q Consensus 175 g~~l~Vdes~LTGES~pv~K~~g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~i~ 253 (959)
|++ .||||+|||||.|+.|++||.||+||.+.+|+++++|+++|.+|.+||+.++++++ .+++++|+.+++++++++.
T Consensus 133 g~~-~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 GES-EVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred Cce-EEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 997 89999999999999999999999999999999999999999999999999999887 6789999999999988654
Q ss_pred HHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCceecchhHHhhccCccEEeeC
Q 002151 254 SIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 333 (959)
Q Consensus 254 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~ilvk~~~~iE~Lg~v~~i~~D 333 (959)
.+++..++. ++.| ..++..++++++++|||+|++++++++..+..+++++|+++|+++++|+|+++|++|||
T Consensus 212 ~v~~~a~~~-~~~~-------~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALIT-FVIW-------LFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHHH-HHHH-------HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 433332222 2222 24678899999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhcccccCChHHHHHHHHhcCchhhhccceEeEeecCCCCCceEE
Q 002151 334 KTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTA 413 (959)
Q Consensus 334 KTGTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~s 413 (959)
||||||+|+|+|.++. .+. +.++++++.+++..+.. +.||++.|+++++.............+.+| .+...
T Consensus 284 KTGTLT~g~~~v~~i~---~~~-~~~~~~~l~~aa~~e~~-s~HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi~ 354 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVH---VFG-DRDRTELLALAAALEAG-SEHPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGVE 354 (562)
T ss_pred CCCCCcCCCEEEEEEe---cCC-CCCHHHHHHHHHHHhcc-CCChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceEE
Confidence 9999999999999875 222 45677788877766554 457999999987643211111111122222 12222
Q ss_pred EEEEecCCeEEEEEeCCHHHHHHhhccchhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeecCCC
Q 002151 414 LTYTDKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDP 493 (959)
Q Consensus 414 v~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l~D~ 493 (959)
.. .+|+ .+..|+++.+.+... . ++++.++|.+++.++.+. +++|++.++|+
T Consensus 355 ~~---~~g~--~~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~ 405 (562)
T TIGR01511 355 GT---VEGT--KIQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQ 405 (562)
T ss_pred EE---ECCE--EEEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEeccc
Confidence 22 2443 355799987644211 1 112457899999988764 89999999999
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhH
Q 002151 494 PRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHK 573 (959)
Q Consensus 494 lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K 573 (959)
+|||++++|++|++.|++++|+|||+..++..+++++|+. +|+++.|++|
T Consensus 406 l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 406 LRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------------------------VRAEVLPDDK 455 (562)
T ss_pred ccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------------------------------EEccCChHHH
Confidence 9999999999999999999999999999999999999982 4788899999
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 002151 574 FEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 653 (959)
Q Consensus 574 ~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~ 653 (959)
.++++.+|++++.|+|+|||.||+||+++|||||+||.|++.++++||+++++++++.++.++++||+++++|++|+.|+
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCccHH
Q 002151 654 VSITIRIVLGFLLLTSIWEFDFPPF 678 (959)
Q Consensus 654 l~~ni~~v~~~~~~~~~~~~~~~p~ 678 (959)
+.+|+..+...+...+.+++.++|+
T Consensus 536 ~~~n~~~i~la~~~~~~~g~~~~p~ 560 (562)
T TIGR01511 536 FGYNVIAIPIAAGVLYPIGILLSPA 560 (562)
T ss_pred HHHHHHHHHHHHhhhhccccccCCC
Confidence 9999876655444444455455553
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-75 Score=725.53 Aligned_cols=528 Identities=24% Similarity=0.326 Sum_probs=435.2
Q ss_pred hhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCCCcEEEEeCCCeeccceEEEec
Q 002151 97 YHD-FVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEG 175 (959)
Q Consensus 97 ~~~-~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g 175 (959)
|++ .+.+++++.++..++.+.+.++.+++++|+++.|++++|+|||++++|+.++|+|||+|.+++||+|||||+|++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 544 5677777788888888888889999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEeccccCCCCceeecCCCCcccccceeeeCeEEEEEEEeccchhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHH
Q 002151 176 DPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST-THVGHFQQVLTSIGNFCICS 254 (959)
Q Consensus 176 ~~l~Vdes~LTGES~pv~K~~g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~i~~ 254 (959)
+. .||||+|||||.|+.|++||.||+||.+.+|.++++|+++|.+|.+|||.++++++ .+++++|+..+++.++++..
T Consensus 365 ~~-~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~ 443 (834)
T PRK10671 365 EA-WLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPV 443 (834)
T ss_pred eE-EEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 86 89999999999999999999999999999999999999999999999999999887 66889999999998876544
Q ss_pred HHHHHHHHHHHhHhcccc--chHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCceecchhHHhhccCccEEee
Q 002151 255 IAIGMIIEIIIIYGHQER--GYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 332 (959)
Q Consensus 255 i~i~~~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~ilvk~~~~iE~Lg~v~~i~~ 332 (959)
+++..++.+++ |...+. .+...+..++++++++|||||++++++++..+..+++|+|+++|+++++|+|+++|++||
T Consensus 444 v~~~a~~~~~~-~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~f 522 (834)
T PRK10671 444 VVVIALVSAAI-WYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVF 522 (834)
T ss_pred HHHHHHHHHHH-HHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEE
Confidence 33333322222 222222 244567778999999999999999999999999999999999999999999999999999
Q ss_pred CCCcceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhcccccCChHHHHHHHHhcCchhhhccceEeEeecCCCCCceE
Q 002151 333 DKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRT 412 (959)
Q Consensus 333 DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~ 412 (959)
|||||||+|+|+|.++. .+ ++.++++++.+++..+.. ..||++.|+++.+.+. ... +..+|.....+
T Consensus 523 DKTGTLT~g~~~v~~~~---~~-~~~~~~~~l~~a~~~e~~-s~hp~a~Ai~~~~~~~-----~~~--~~~~~~~~~g~- 589 (834)
T PRK10671 523 DKTGTLTEGKPQVVAVK---TF-NGVDEAQALRLAAALEQG-SSHPLARAILDKAGDM-----TLP--QVNGFRTLRGL- 589 (834)
T ss_pred cCCCccccCceEEEEEE---cc-CCCCHHHHHHHHHHHhCC-CCCHHHHHHHHHHhhC-----CCC--CcccceEecce-
Confidence 99999999999998865 22 246677777777666543 4579999998875321 110 01122222211
Q ss_pred EEEEEecCCeEEEEEeCCHHHHHHhhccchhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeecCC
Q 002151 413 ALTYTDKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFD 492 (959)
Q Consensus 413 sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l~D 492 (959)
.+... .+|+. +.+|+++.+.+.... .+.+.+.+++++++|.++++++++. +++|++.+.|
T Consensus 590 Gv~~~-~~g~~--~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d 649 (834)
T PRK10671 590 GVSGE-AEGHA--LLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRD 649 (834)
T ss_pred EEEEE-ECCEE--EEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccC
Confidence 11111 24543 456999977543211 2345566778889999999999865 7999999999
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++|||++++|++|++.|+++.|+|||+..+|..+++++||. ++|+++.|++
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~-----------------------------~~~~~~~p~~ 700 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID-----------------------------EVIAGVLPDG 700 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC-----------------------------EEEeCCCHHH
Confidence 99999999999999999999999999999999999999994 3689999999
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 652 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~ 652 (959)
|.++++.+|++|+.|+|+|||+||+|||++||+||+||+|+|.++++||+++++++++.|..++++||+++++|++|+.|
T Consensus 701 K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~ 780 (834)
T PRK10671 701 KAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLG 780 (834)
T ss_pred HHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh-ccCCccHHHHHHHHHHhh
Q 002151 653 AVSITIRIVLGFLLLTSI-WEFDFPPFMVLIIAILND 688 (959)
Q Consensus 653 ~l~~ni~~v~~~~~~~~~-~~~~~~p~~il~i~~~~d 688 (959)
++.+|+..+...++.+.. +++.++|+.-.....+.+
T Consensus 781 a~~yn~~~i~~a~g~~~p~~g~~l~p~~a~~~m~~ss 817 (834)
T PRK10671 781 AFIYNSLGIPIAAGILWPFTGTLLNPVVAGAAMALSS 817 (834)
T ss_pred HHHHHHHHHHHHHhchhhhhhcccCHHHHHHHhcccc
Confidence 999998665543322211 233567765444333333
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-76 Score=654.97 Aligned_cols=766 Identities=20% Similarity=0.261 Sum_probs=521.6
Q ss_pred HHHhhcCCCccCcccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHhhCCCCCC-chhhHHHHHHHHHHHHHHHHHHH
Q 002151 44 SRLEVFGHNKLEEKKENKI----LKFLGFMWNPLSWVMEAAALMAITLARGGGKDV-DYHDFVGILALLIINSTISFIEE 118 (959)
Q Consensus 44 ~r~~~~G~N~i~~~~~~~~----~~fl~~~~~~~~~~l~~aails~~~~~~~~~~~-~~~~~~~I~~~l~i~~~~~~~~e 118 (959)
.+.++|-||.+...|++.+ ..++.||...++.+++..++..+......|... +|...+.++.+.++--.++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4667888999988887653 356677777788887777777776554433322 34444444444455555555555
Q ss_pred HHHHHHHHHHHhccCCeE-EEEECCeEEEEecCCcCCCcEEEEeCCCeeccceEEEecC----ceEEeccccCCCCceee
Q 002151 119 NNAGNAAAALMARLAPKA-KVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGD----PLKIDQSALTGESLPVT 193 (959)
Q Consensus 119 ~~a~~~~~~L~~~~~~~~-~V~RdG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~----~l~Vdes~LTGES~pv~ 193 (959)
+++.+. ++ ..+. +.-|||...+ |++++++||+|.+..+++||||.+++..+ .+.+-+-.|+||+.-+.
T Consensus 154 ~~rd~~---~N---se~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 154 RRRDRE---LN---SEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHhhhh---hh---hhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 554442 22 2333 3447776555 99999999999999999999999999533 25899999999998776
Q ss_pred cCC-----------------------------------------------CCcccccceeeeCeEEEEEEEeccchhhhh
Q 002151 194 KNP-----------------------------------------------GDGVYSGSTCKQGEIEAVVIATGVHTFFGK 226 (959)
Q Consensus 194 K~~-----------------------------------------------g~~v~aGt~v~~G~~~~~V~~tG~~T~~gk 226 (959)
|-| .|.++++|.+.+|.++|+|++||.+|..
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs-- 304 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS-- 304 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH--
Confidence 643 2578999999999999999999999963
Q ss_pred hhhhhccc---CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHH
Q 002151 227 AAHLVEST---THVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAI 303 (959)
Q Consensus 227 i~~l~~~~---~~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~ 303 (959)
.++.+ .+.+.++..+|.+.+.+.+.+.+..+ .++....++..|...+..++.++...||++|-+-+.++...
T Consensus 305 ---vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~--vmv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ 379 (1051)
T KOG0210|consen 305 ---VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSI--VMVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIV 379 (1051)
T ss_pred ---HhccCCcccccceeeeecccHHHHHHHHHHHHHH--HHHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhh
Confidence 33433 55677888888888876554333222 22333445678888899999999999999999999999999
Q ss_pred HHHHhhhC----CceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeeecCCCCCHH------------------
Q 002151 304 GSHRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKD------------------ 361 (959)
Q Consensus 304 ~~~~l~k~----~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~------------------ 361 (959)
-++....+ |..+|+.+.-|+||+++++.+|||||||+|+|.++++++..+.......+
T Consensus 380 ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~ 459 (1051)
T KOG0210|consen 380 YSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGK 459 (1051)
T ss_pred HhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCccccc
Confidence 88888765 67899999999999999999999999999999999988652110000000
Q ss_pred ---------------HHHHHHHHhcccc------------cCChHHHHHHHHh-----------------cCchhhhccc
Q 002151 362 ---------------MVILTAARASRLE------------NQDAIDAAIVSML-----------------ADPKEARAEI 397 (959)
Q Consensus 362 ---------------~~l~~aa~~~~~~------------~~~~i~~ai~~~~-----------------~~~~~~~~~~ 397 (959)
+..+..+.|.+.. ..+|.+.|+++.. .++......|
T Consensus 460 ~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~y 539 (1051)
T KOG0210|consen 460 GALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNY 539 (1051)
T ss_pred ccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeE
Confidence 1122223333211 1134444443321 1112223478
Q ss_pred eEeEeecCCCCCceEEEEEEec-CCeEEEEEeCCHHHHHHhhccchhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCC-
Q 002151 398 TEVHFLPFNPTDKRTALTYTDK-NGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTK- 475 (959)
Q Consensus 398 ~~l~~~pF~s~~kr~sv~~~~~-~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~- 475 (959)
++++.+||+|+.|||.++++++ .|+...+.|||+-+|-.....+ +.+++...+|+++|+|+|.+|.|.++++++
T Consensus 540 qIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N----dWleEE~gNMAREGLRtLVvakK~Ls~~eye 615 (1051)
T KOG0210|consen 540 QILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN----DWLEEECGNMAREGLRTLVVAKKVLSEEEYE 615 (1051)
T ss_pred EEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc----hhhhhhhhhhhhhcceEEEEEecccCHHHHH
Confidence 9999999999999999999975 7899999999999988776544 355666788999999999999999886541
Q ss_pred -------------------------CCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHh
Q 002151 476 -------------------------DSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRL 530 (959)
Q Consensus 476 -------------------------~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~l 530 (959)
...|.||+++|+.+.||++++|++.+++.||+|||++||+|||+.+||..||+..
T Consensus 616 ~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs 695 (1051)
T KOG0210|consen 616 AFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSS 695 (1051)
T ss_pred HHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhc
Confidence 1468899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCc--------------------------cccCcccccc---CCcchHHHHhh--cCceeecChhhHHHHHHH
Q 002151 531 GMGTNMYPSS--------------------------ALLGEKKDTI---VGLPVDDLIEK--ADGFAGVFPEHKFEIVKR 579 (959)
Q Consensus 531 Gi~~~~~~~~--------------------------~l~g~~~~~~---~~~~~~~~i~~--~~vfar~~Pe~K~~iV~~ 579 (959)
++......-. ++.|+.++-. -+.++.++..+ +.|+||++|+||+++++.
T Consensus 696 ~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~l 775 (1051)
T KOG0210|consen 696 RLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRL 775 (1051)
T ss_pred cceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHH
Confidence 9865332111 2222221100 01123333333 348999999999999999
Q ss_pred HhhC-CCEEEEEcCCcCChhhhhcCCeeEEe-c-CchHHHHhhccccccCCCchHHHHHHH-HHHHHHHHHHHHHHHHHH
Q 002151 580 LQAR-KHIVGMTGDGVNDAPALKVADIGIAV-A-DSTDAARSASDIVLTEPGLSVIISAVL-TSRAIFQRMKNYTIYAVS 655 (959)
Q Consensus 580 Lq~~-g~~V~m~GDGvNDapALk~AdVGIam-g-~gtd~Ak~aADivL~~~~~~~I~~ai~-~gR~~~~~i~~~~~~~l~ 655 (959)
+|++ |..|+++|||-||+.|+++||+||++ | +|.+++- |||+.+++ |+.+-+++. +||..|+|-.+..+|.+-
T Consensus 776 lq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASL-AADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViH 852 (1051)
T KOG0210|consen 776 LQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASL-AADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIH 852 (1051)
T ss_pred HHHhhCceEEEEcCCCccchheeecccceeeecccccccch-hccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHh
Confidence 9976 89999999999999999999999998 6 6666555 99999965 999998875 499999999998888775
Q ss_pred HHHHHHHHHHHHHHhccC-C---ccHH-HHHHHHHHhhhhhcccccCCCCCCC----CCC--------chhhHHHHHHHH
Q 002151 656 ITIRIVLGFLLLTSIWEF-D---FPPF-MVLIIAILNDGTIMTISKDRVKPSP----SPD--------SWKLREIFATGV 718 (959)
Q Consensus 656 ~ni~~v~~~~~~~~~~~~-~---~~p~-~il~i~~~~d~~~~~l~~d~~~~~~----~p~--------~~~~~~~~~~~~ 718 (959)
..+.+..+...+...+-| + +.-+ ++.+..+.+-++.+++-.|+.-.+. -|+ +....+-|..|+
T Consensus 853 RGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwv 932 (1051)
T KOG0210|consen 853 RGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWV 932 (1051)
T ss_pred hhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhh
Confidence 555444333333222111 1 1112 2222223333334677666642221 121 112234566677
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcccChhH
Q 002151 719 VIGSYLALTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIFVTRSRGWSFTERPGL 798 (959)
Q Consensus 719 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~~~~ 798 (959)
++.+|++.+....+++.+.+.|+ + ..++.|+..++..+++.....++|.|.
T Consensus 933 LISiYQG~vim~g~~~l~~~ef~----~--------------------ivaisFtaLi~tELiMVaLtv~tw~~~----- 983 (1051)
T KOG0210|consen 933 LISIYQGSVIMYGALLLFDTEFI----H--------------------IVAISFTALILTELIMVALTVRTWHWL----- 983 (1051)
T ss_pred hHHHHcccHHHHHHHHHhhhhhe----E--------------------eeeeeeHHHHHHHHHHHhhhhhhhhHH-----
Confidence 88888887776655555543321 1 123333444555554444445566443
Q ss_pred HHHHHHHHHHHH-HHHHHhhccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhHhhccch
Q 002151 799 LLVTAFIIAQLV-ATLISALATSDFAGIHKIGWRWTSIIWLYNIIIYMLLDPIKVAVGYALSGR 861 (959)
Q Consensus 799 ~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~ 861 (959)
++++-.+++.+ ...+++...+ |-.-.-.+|.+++-+.++.++..+|..+.|+++|+.-|+.
T Consensus 984 -m~vae~lsL~~Yivsl~~l~~y-fd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpS 1045 (1051)
T KOG0210|consen 984 -MVVAELLSLALYIVSLAFLHEY-FDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPS 1045 (1051)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc
Confidence 22222222111 1111211110 1111223455555556677788889999999999887753
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-72 Score=637.05 Aligned_cols=571 Identities=23% Similarity=0.289 Sum_probs=420.0
Q ss_pred CCHHHHHHHcCCCCCCCCH-HHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhhCCCCCCchhh
Q 002151 21 IPIEEVFENLKCTSDGLSS-DEVQSRLEVFGHNKLEEKKENKILKFLGFMWNPLSWVMEAAALMAITLARGGGKDVDYHD 99 (959)
Q Consensus 21 ~~~~~~~~~l~~~~~GLs~-~e~~~r~~~~G~N~i~~~~~~~~~~fl~~~~~~~~~~l~~aails~~~~~~~~~~~~~~~ 99 (959)
.|.++.+..++.+ +|+.. +|++.-.++||.|+.+...+.+-..|.+.-..|| +++.+..+..|.+. ..|+.
T Consensus 148 fp~~~~~g~~~k~-~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPf-FVFQVFcvgLWCLD------eyWYy 219 (1160)
T KOG0209|consen 148 FPTDEPFGYFQKS-TGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPF-FVFQVFCVGLWCLD------EYWYY 219 (1160)
T ss_pred cCcCCcchhhhhc-cCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCce-eeHhHHhHHHHHhH------HHHHH
Confidence 3556666655533 46653 4444455569999999988888888888888888 45555555556663 35666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCCCcEEEEeC---CCeeccceEEEecC
Q 002151 100 FVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKL---GDIIPADARLLEGD 176 (959)
Q Consensus 100 ~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l~~---Gd~VPaD~~ll~g~ 176 (959)
.+.-+++++..-..-.+|+.+.-...+. |..-+....|.|+++|+.+.++||.|||+|.|.. ...||||.+|+.|+
T Consensus 220 SlFtLfMli~fE~tlV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gs 298 (1160)
T KOG0209|consen 220 SLFTLFMLIAFEATLVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGS 298 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecc
Confidence 6665555554333333444443332222 2334557899999999999999999999999987 56799999999999
Q ss_pred ceEEeccccCCCCceeecCC-------------C----Ccccccceeee-------------CeEEEEEEEeccchhhhh
Q 002151 177 PLKIDQSALTGESLPVTKNP-------------G----DGVYSGSTCKQ-------------GEIEAVVIATGVHTFFGK 226 (959)
Q Consensus 177 ~l~Vdes~LTGES~pv~K~~-------------g----~~v~aGt~v~~-------------G~~~~~V~~tG~~T~~gk 226 (959)
+ .|||++|||||.|..|.+ + ..+|.||.+++ |-+.+.|++||.+|..|+
T Consensus 299 c-iVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGk 377 (1160)
T KOG0209|consen 299 C-IVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGK 377 (1160)
T ss_pred e-eechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCc
Confidence 8 699999999999999976 1 26899999985 669999999999999999
Q ss_pred hhhhhcc-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccc----cchHHHHHHHHHHHHhhcCCcchHHHHHHH
Q 002151 227 AAHLVES-TTHVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQE----RGYRVGIDNLLVILIGGIPIAMPTVLSVTM 301 (959)
Q Consensus 227 i~~l~~~-~~~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~~~~----~~~~~~~~~~l~llv~~iP~aLp~~~~v~l 301 (959)
+.+.+-- +++.+.-.+..- .++.++.+++++.....|.-.. ++-...+..+..++...+|..||+-++++.
T Consensus 378 LvRtilf~aervTaNn~Etf----~FILFLlVFAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAV 453 (1160)
T KOG0209|consen 378 LVRTILFSAERVTANNRETF----IFILFLLVFAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAV 453 (1160)
T ss_pred eeeeEEecceeeeeccHHHH----HHHHHHHHHHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHH
Confidence 8765543 344332222111 1111112222221111111111 122233445556778889999999999999
Q ss_pred HHHHHHhhhCCceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeeecCCC--------CCHHHHHHHH--HHhc
Q 002151 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNG--------VDKDMVILTA--ARAS 371 (959)
Q Consensus 302 ~~~~~~l~k~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~--------~~~~~~l~~a--a~~~ 371 (959)
-.+...|+|.+++|..+-.+.-.|++|+.|||||||||+..|.|..+-- ...++ ...+.+..+| ...-
T Consensus 454 NsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag--~~~~~~~~~~~s~~p~~t~~vlAscHsLv 531 (1160)
T KOG0209|consen 454 NSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAG--LSADEGALTPASKAPNETVLVLASCHSLV 531 (1160)
T ss_pred HHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEeccc--ccCCcccccchhhCCchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988541 11111 1122233222 2222
Q ss_pred ccc---cCChHHHHHHHHhcCchhh----------hccceEeEeecCCCCCceEEEEEEec----CCeEEEEEeCCHHHH
Q 002151 372 RLE---NQDAIDAAIVSMLADPKEA----------RAEITEVHFLPFNPTDKRTALTYTDK----NGKMHRASKGAPEQI 434 (959)
Q Consensus 372 ~~~---~~~~i~~ai~~~~~~~~~~----------~~~~~~l~~~pF~s~~kr~sv~~~~~----~g~~~~~~KGa~e~i 434 (959)
..+ -+||.++|.++.++..-+. ....++.+.+.|.|.-|||+++.... +-+++..+|||||.|
T Consensus 532 ~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi 611 (1160)
T KOG0209|consen 532 LLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVI 611 (1160)
T ss_pred HhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHH
Confidence 223 3799999999887532221 12466778899999999999887532 236788899999999
Q ss_pred HHhhccchhHHHHHHHHHHHHHHccCeEEEEEEeecCC--------CCCCCCCCCceEEEEeecCCCCCcchHHHHHHHH
Q 002151 435 LNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPA--------GTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRAL 506 (959)
Q Consensus 435 l~~c~~~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~--------~~~~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~ 506 (959)
.++.. ++++.+++...+|+++|.||||++||+++. -.+++.|++|+|.|++.|.-|+|+|++++|+.|+
T Consensus 612 ~~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~ 688 (1160)
T KOG0209|consen 612 QEMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELN 688 (1160)
T ss_pred HHHHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHh
Confidence 98874 567788888899999999999999999873 2367889999999999999999999999999999
Q ss_pred hCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCC---------------------------------------ccccCccc
Q 002151 507 DLGVSVKMITGDQLAIGKETGRRLGMGTNMYPS---------------------------------------SALLGEKK 547 (959)
Q Consensus 507 ~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~---------------------------------------~~l~g~~~ 547 (959)
+.+.+++||||||+.||.++|+++||..+..+. ..++|+.+
T Consensus 689 ~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l 768 (1160)
T KOG0209|consen 689 NSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSAL 768 (1160)
T ss_pred ccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHH
Confidence 999999999999999999999999996542110 01122222
Q ss_pred cccCC-cchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEec
Q 002151 548 DTIVG-LPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVA 610 (959)
Q Consensus 548 ~~~~~-~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg 610 (959)
+.+.. ..+.+++.++.||||+.|.||..++..|++.|+.++|||||.||+.|||+||||||+-
T Consensus 769 ~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL 832 (1160)
T KOG0209|consen 769 DHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALL 832 (1160)
T ss_pred HHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehh
Confidence 22211 1345567778899999999999999999999999999999999999999999999985
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-63 Score=540.79 Aligned_cols=521 Identities=26% Similarity=0.374 Sum_probs=398.2
Q ss_pred HHHhHHHHHHHHHHHHHHHHh----hCCCCCCchhhHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhcc-CCeEEE
Q 002151 68 FMWNPLSWVMEAAALMAITLA----RGGGKDVDYHDFVGILALL----IINSTISFIEENNAGNAAAALMARL-APKAKV 138 (959)
Q Consensus 68 ~~~~~~~~~l~~aails~~~~----~~~~~~~~~~~~~~I~~~l----~i~~~~~~~~e~~a~~~~~~L~~~~-~~~~~V 138 (959)
+.+||..++.++.++++.++. ..++...+......|.+++ ++..+-+.+.|-|.+...++|++.. ..++++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 456887776666666665332 1111111222222222222 3333344455555444445555432 235677
Q ss_pred EEC-CeEEEEecCCcCCCcEEEEeCCCeeccceEEEecCceEEeccccCCCCceeecCCC---CcccccceeeeCeEEEE
Q 002151 139 LRD-GKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPG---DGVYSGSTCKQGEIEAV 214 (959)
Q Consensus 139 ~Rd-G~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~l~Vdes~LTGES~pv~K~~g---~~v~aGt~v~~G~~~~~ 214 (959)
+++ |.++.+++.+|+.||+|+++.||.||+||-++||.+ +||||++||||-||-|.+| +.|-.||.+.+..++..
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ir 187 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIR 187 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEE
Confidence 775 899999999999999999999999999999999998 8999999999999999998 67999999999999999
Q ss_pred EEEeccchhhhhhhhhhccc-CCCCcHHHHHHHHHHHH-HHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCc
Q 002151 215 VIATGVHTFFGKAAHLVEST-THVGHFQQVLTSIGNFC-ICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIA 292 (959)
Q Consensus 215 V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~-i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~a 292 (959)
+++.-.+|++.|+..+++.+ .+++|-+-.++.+..-+ ++++++...+..+..|.. + -...+..+++++++.+|-.
T Consensus 188 ita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~~Tl~p~a~y~~-g--~~~~i~~LiALlV~LIPTT 264 (681)
T COG2216 188 ITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAVATLYPFAIYSG-G--GAASVTVLVALLVCLIPTT 264 (681)
T ss_pred EEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHHHhhhhHHHHcC-C--CCcCHHHHHHHHHHHhccc
Confidence 99999999999999999987 66777655544332111 111110000111111111 1 1123556788999999988
Q ss_pred chHHHHHHHHHHHHHhhhCCceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhcc
Q 002151 293 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASR 372 (959)
Q Consensus 293 Lp~~~~v~l~~~~~~l~k~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~ 372 (959)
..--++-.=-.|+.|+.+.|++.++..++|..|.+|++..|||||+|-|.-.-.++. + .++.+.+++...|..++-
T Consensus 265 IGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~---p-~~gv~~~~la~aa~lsSl 340 (681)
T COG2216 265 IGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFI---P-VPGVSEEELADAAQLASL 340 (681)
T ss_pred HHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhhee---c-CCCCCHHHHHHHHHHhhh
Confidence 777776666678999999999999999999999999999999999999976666654 2 347888887766665543
Q ss_pred cccCChHHHHHHHHhcCch-hhhc-cce-EeEeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhccch-hHHHHH
Q 002151 373 LENQDAIDAAIVSMLADPK-EARA-EIT-EVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWNKA-DIEKKV 448 (959)
Q Consensus 373 ~~~~~~i~~ai~~~~~~~~-~~~~-~~~-~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~-~~~~~~ 448 (959)
. .+.|-.++++..+.+.. +.+. ... ...++||+.+.+++.+-. ++| ..+-|||.+.+.+...... ..++.+
T Consensus 341 ~-DeTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l 415 (681)
T COG2216 341 A-DETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDL 415 (681)
T ss_pred c-cCCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHH
Confidence 3 34466666666543221 1111 111 357899998876655443 233 4567999999998876433 367888
Q ss_pred HHHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHH
Q 002151 449 HSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGR 528 (959)
Q Consensus 449 ~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~ 528 (959)
.+..++-++.|-..|+++... +++|.+.+.|-+|||.+|-+++||++|||++|+||||+.||..||+
T Consensus 416 ~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~ 482 (681)
T COG2216 416 DAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA 482 (681)
T ss_pred HHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHH
Confidence 899999999999999999866 8999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE
Q 002151 529 RLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIA 608 (959)
Q Consensus 529 ~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIa 608 (959)
+.|++ +..|.++||+|.++|+.-|.+|+.|+|||||.||||||.+||||+|
T Consensus 483 EAGVD-----------------------------dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~A 533 (681)
T COG2216 483 EAGVD-----------------------------DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVA 533 (681)
T ss_pred HhCch-----------------------------hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhh
Confidence 99985 3579999999999999999999999999999999999999999999
Q ss_pred ecCchHHHHhhccccccCCCchHHHHHHHHHHHHH
Q 002151 609 VADSTDAARSASDIVLTEPGLSVIISAVLTSRAIF 643 (959)
Q Consensus 609 mg~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~ 643 (959)
|.+||++||||+.+|=+|.|...+.+.++.|++..
T Consensus 534 MNsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 534 MNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred hccccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 99999999999999999999999999999999765
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=314.63 Aligned_cols=220 Identities=36% Similarity=0.538 Sum_probs=191.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCe-EEEEECCeEEEEecCCcCCCcEEEEeCCCeeccceEEEe-cCceEE
Q 002151 103 ILALLIINSTISFIEENNAGNAAAALMARLAPK-AKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLE-GDPLKI 180 (959)
Q Consensus 103 I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~-~~V~RdG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~-g~~l~V 180 (959)
|+++++++.++++++++++++..+++++..+++ ++|+|||++++++++||+|||+|.|++||++||||++++ |+ +.|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~-~~v 80 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGS-AYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSE-EEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccc-ccc
Confidence 567778889999999999999999999888887 999999999999999999999999999999999999999 65 589
Q ss_pred eccccCCCCceeecC-----CCCcccccceeeeCeEEEEEEEeccchhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHH
Q 002151 181 DQSALTGESLPVTKN-----PGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST-THVGHFQQVLTSIGNFCICS 254 (959)
Q Consensus 181 des~LTGES~pv~K~-----~g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~i~~ 254 (959)
|||.||||+.|+.|. +|+.+|+||.+.+|.+.++|++||.+|.+|++.+.+... .+++++++.++++..+++..
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 999999999999999999999999999999999988776 45689999999998886554
Q ss_pred HHHHHHHHHHHhHh-ccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCceecchhHHhh
Q 002151 255 IAIGMIIEIIIIYG-HQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 323 (959)
Q Consensus 255 i~i~~~~~~~~~~~-~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~ilvk~~~~iE~ 323 (959)
++++.++.+++.+. ....++...+..++++++++||++||+++++++..++++|+++|+++|+++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 44433333332222 2456777888999999999999999999999999999999999999999999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-26 Score=241.98 Aligned_cols=211 Identities=32% Similarity=0.442 Sum_probs=150.6
Q ss_pred ccEEeeCCCcceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhcccccCChHHHHHHHHhcCchhhhccceEeEeecCC
Q 002151 327 MDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFN 406 (959)
Q Consensus 327 v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~ 406 (959)
|++||||||||||+|+|.+ . . .....++..+..... .+.+|++.++.......... .... +|.
T Consensus 1 i~~i~fDktGTLt~~~~~v---~---~----~~~~~~~~~~~~~~~-~s~~p~~~~~~~~~~~~~~~-~~~~-----~~~ 63 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---A---P----PSNEAALAIAAALEQ-GSEHPIGKAIVEFAKNHQWS-KSLE-----SFS 63 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---E---S----CSHHHHHHHHHHHHC-TSTSHHHHHHHHHHHHHHHH-SCCE-----EEE
T ss_pred CeEEEEecCCCcccCeEEE---E---e----ccHHHHHHHHHHhhh-cCCCcchhhhhhhhhhccch-hhhh-----hhe
Confidence 6899999999999999999 1 2 345555555544433 34579999988775432211 1111 111
Q ss_pred CCCceEEEEEEecCCeEEEEEeCCHHHHHHhhccchhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEE
Q 002151 407 PTDKRTALTYTDKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIG 486 (959)
Q Consensus 407 s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG 486 (959)
....+...... ++. +. |.++.+.+.+... . ............|.+.+.++. ++.++|
T Consensus 64 ~~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 120 (215)
T PF00702_consen 64 EFIGRGISGDV--DGI---YL-GSPEWIHELGIRV--I--SPDLVEEIQESQGRTVIVLAV-------------NLIFLG 120 (215)
T ss_dssp EETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH--H--HHHHHHHHHHHHHHHCEEEEE-------------SHEEEE
T ss_pred eeeeccccccc--ccc---cc-ccchhhhhccccc--c--ccchhhhHHHhhCCcccceee-------------cCeEEE
Confidence 11111111111 122 22 8888877655331 1 111122233556666666665 348999
Q ss_pred EeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCcee
Q 002151 487 LLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFA 566 (959)
Q Consensus 487 li~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfa 566 (959)
.+.+.|+||||++++|+.|+++|++++|+|||+..+|.++++++||.+ ..+|+
T Consensus 121 ~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~---------------------------~~v~a 173 (215)
T PF00702_consen 121 LFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD---------------------------SIVFA 173 (215)
T ss_dssp EEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS---------------------------EEEEE
T ss_pred EEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc---------------------------ccccc
Confidence 999999999999999999999999999999999999999999999942 13799
Q ss_pred ec--ChhhH--HHHHHHHhhCCCEEEEEcCCcCChhhhhcCC
Q 002151 567 GV--FPEHK--FEIVKRLQARKHIVGMTGDGVNDAPALKVAD 604 (959)
Q Consensus 567 r~--~Pe~K--~~iV~~Lq~~g~~V~m~GDGvNDapALk~Ad 604 (959)
++ +|++| .++++.||.+++.|+|+|||+||++|+|+||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.2e-15 Score=137.78 Aligned_cols=123 Identities=28% Similarity=0.386 Sum_probs=108.3
Q ss_pred eEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhc
Q 002151 483 EFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKA 562 (959)
Q Consensus 483 ~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~ 562 (959)
...+.++---++=++++++|++|++. ++|++.|||...+-...|+-.||+..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 46777777788889999999999999 99999999999999999999998643
Q ss_pred CceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEe-c--CchHHHHhhccccccCCCchHHHHH
Q 002151 563 DGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAV-A--DSTDAARSASDIVLTEPGLSVIISA 635 (959)
Q Consensus 563 ~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIam-g--~gtd~Ak~aADivL~~~~~~~I~~a 635 (959)
.+|+...|+.|.++++.|++.++.|.|+|||+||.+||++||+||.. + +..+-+.++||+++-+ ...+++.
T Consensus 72 rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 72 RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 57999999999999999999999999999999999999999999986 4 5567788999999944 4444443
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.37 E-value=1e-12 Score=112.66 Aligned_cols=67 Identities=36% Similarity=0.543 Sum_probs=60.8
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCc-ccccHHHHHHHHHHhHHHHHHHHHHHHH
Q 002151 18 LENIPIEEVFENLKCT-SDGLSSDEVQSRLEVFGHNKLEE-KKENKILKFLGFMWNPLSWVMEAAALMA 84 (959)
Q Consensus 18 ~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~-~~~~~~~~fl~~~~~~~~~~l~~aails 84 (959)
||.++.+++++.|+++ .+|||++||++|+++||+|++++ ++++.|..|+++|++|+.++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 7999999999999965 78999999999999999999955 5578888999999999999999999886
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.3e-08 Score=112.71 Aligned_cols=206 Identities=16% Similarity=0.208 Sum_probs=140.6
Q ss_pred ceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCC------ccccCcccc-------
Q 002151 482 WEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPS------SALLGEKKD------- 548 (959)
Q Consensus 482 l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~------~~l~g~~~~------- 548 (959)
-.|.|++.+.-++|++....|+.|-++-|+.+-.+-.+....+-.|.++||...-.-. ....|.+..
T Consensus 815 QIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a 894 (1354)
T KOG4383|consen 815 QIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFA 894 (1354)
T ss_pred chhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhh
Confidence 3699999999999999999999999999999999999999999999999996421100 000000000
Q ss_pred ---------------------c---------------cC--------CcchHHH----------Hhh-------cCceee
Q 002151 549 ---------------------T---------------IV--------GLPVDDL----------IEK-------ADGFAG 567 (959)
Q Consensus 549 ---------------------~---------------~~--------~~~~~~~----------i~~-------~~vfar 567 (959)
. ++ +.+...+ +++ +..|..
T Consensus 895 ~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTD 974 (1354)
T KOG4383|consen 895 AQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTD 974 (1354)
T ss_pred ccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccC
Confidence 0 00 0000000 001 124899
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcCChh--hhhcCCeeEEecC-------------chHH--HH-------------
Q 002151 568 VFPEHKFEIVKRLQARKHIVGMTGDGVNDAP--ALKVADIGIAVAD-------------STDA--AR------------- 617 (959)
Q Consensus 568 ~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDap--ALk~AdVGIamg~-------------gtd~--Ak------------- 617 (959)
++|+.--++++.+|+.|++|+.+|.-.|-.. -.-+|||+|++.. ++.. |.
T Consensus 975 cnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgq 1054 (1354)
T KOG4383|consen 975 CNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQ 1054 (1354)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeeccc
Confidence 9999999999999999999999999987443 3468999999852 1111 11
Q ss_pred ---hhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCCccHHHHHHHHHHh
Q 002151 618 ---SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTS-IWEFDFPPFMVLIIAILN 687 (959)
Q Consensus 618 ---~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~~~~~~~~-~~~~~~~p~~il~i~~~~ 687 (959)
-+.|+-+-+..+-.|..+|+-+|....-+|+.++|.+...+..++..++..+ +.+..|+.-+++|...+-
T Consensus 1055 LnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc 1128 (1354)
T KOG4383|consen 1055 LNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFC 1128 (1354)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHH
Confidence 0123333233344677888899999999999999999888776655554433 344556666677766654
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.9e-09 Score=110.93 Aligned_cols=167 Identities=17% Similarity=0.198 Sum_probs=101.6
Q ss_pred cCCccHHHHHHHHHHhhhh-hcccccCCCCC------CCCCCchhh-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 002151 672 EFDFPPFMVLIIAILNDGT-IMTISKDRVKP------SPSPDSWKL-REIFATGVVIGSYLALTTVIFFWAIFETDFFQN 743 (959)
Q Consensus 672 ~~~~~p~~il~i~~~~d~~-~~~l~~d~~~~------~~~p~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 743 (959)
+.|++|+|+||+|+++|++ .++++.|+.++ |++|+...+ ++.+...+..|+++++++++.|++....
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 4689999999999999998 59999887643 333443333 4577777899999999999888776531
Q ss_pred ccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHH-HhhhhhccCCCccc----ChhHHHHHHHHHHHHHHHHHHhhc
Q 002151 744 HFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQA-LIFVTRSRGWSFTE----RPGLLLVTAFIIAQLVATLISALA 818 (959)
Q Consensus 744 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~i~~~rs~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~ 818 (959)
+|.+....+ ......++++|...+++|+ +.+++|+++.+.+. +.|.+++++++++.++...+ .|.
T Consensus 76 -~~~~~~~~~--------~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i-~~~ 145 (182)
T PF00689_consen 76 -FGWDEETNN--------DNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILI-VYV 145 (182)
T ss_dssp -TCSSSHHHT--------TCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHH-HHS
T ss_pred -cccccccch--------hHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHH-hcc
Confidence 222111000 0133456666777777886 67999996554332 13555555555443222222 222
Q ss_pred c--ccccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002151 819 T--SDFAGIHKIGWRWTSIIWLYNIIIYMLLDPIKVA 853 (959)
Q Consensus 819 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 853 (959)
+ -..+.+.+.++..|+.+++++++.++..|++|++
T Consensus 146 P~~~~~f~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 146 PGLNRIFGTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp TTHHHHST----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred hhhHhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 1 1224456677777788889999999999999975
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.9e-10 Score=95.22 Aligned_cols=59 Identities=39% Similarity=0.644 Sum_probs=53.2
Q ss_pred HcCCCCC-CCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 002151 29 NLKCTSD-GLSSDEVQSRLEVFGHNKLEEKK-ENKILKFLGFMWNPLSWVMEAAALMAITL 87 (959)
Q Consensus 29 ~l~~~~~-GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~fl~~~~~~~~~~l~~aails~~~ 87 (959)
.|+++.+ |||++|+++|+++||+|++++++ .+.|..|+++|++|+.++|++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4677754 99999999999999999998876 78888999999999999999999999876
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.4e-09 Score=112.00 Aligned_cols=131 Identities=18% Similarity=0.169 Sum_probs=96.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
+++|++++.|+.+++.| ++.++||-....+..+++++|+..- +.......+ ...+.+ ..-..|++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~-~an~l~~~~-~g~~tG------------~~~~~~~~ 132 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTL-LCHKLEIDD-SDRVVG------------YQLRQKDP 132 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchh-hceeeEEec-CCeeEC------------eeecCcch
Confidence 68999999999999975 9999999999999999999999531 111111000 000000 00145789
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTS 639 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~g 639 (959)
|.++++.+++.|..+.|+|||.||.||++.||+||++.....+.+.+-|+-.. .+.+.+..++.++
T Consensus 133 K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (203)
T TIGR02137 133 KRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLKA 198 (203)
T ss_pred HHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcc-cCHHHHHHHHHHH
Confidence 99999999988888999999999999999999999998666566655554443 4577777777654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.87 E-value=7e-09 Score=109.92 Aligned_cols=129 Identities=20% Similarity=0.291 Sum_probs=94.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceee-cChh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAG-VFPE 571 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar-~~Pe 571 (959)
+++|++++.++.|++.|+++.++||.....+..+.+.+|+..- +.......+ ....+ .+.+. ..++
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~~--~~~~~----------~~~~~~~~~~ 151 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVED--GKLTG----------LVEGPIVDAS 151 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEEC--CEEEE----------EecCcccCCc
Confidence 6899999999999999999999999999999999999998531 110000000 00000 00111 1234
Q ss_pred hHHHHHHHHhhCC----CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHH
Q 002151 572 HKFEIVKRLQARK----HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISA 635 (959)
Q Consensus 572 ~K~~iV~~Lq~~g----~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~a 635 (959)
.|.++++.+.++. ..+.|+||+.||.+|+++|+++++++ +.+..+++||++|.+++|..+...
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 4777777665543 35889999999999999999999985 567888899999999999887654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=7.8e-09 Score=115.40 Aligned_cols=127 Identities=20% Similarity=0.278 Sum_probs=98.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCC-----CccccCccccccCCcchHHHHhhcCceee
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYP-----SSALLGEKKDTIVGLPVDDLIEKADGFAG 567 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~-----~~~l~g~~~~~~~~~~~~~~i~~~~vfar 567 (959)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+.....+ ...++|.... ++
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g--------------~i--- 243 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLG--------------DI--- 243 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecC--------------cc---
Confidence 5889999999999999999999999998888899999998531100 0011111000 01
Q ss_pred cChhhHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 568 VFPEHKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 568 ~~Pe~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
+..+.|.+.++.+.++ | +.|.++|||.||.+|++.|++|||+ ++.+..++.||.++..+++..+...+-
T Consensus 244 v~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 244 VDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred CCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 2346899988888654 3 5799999999999999999999999 888899999999999889988877653
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.9e-08 Score=91.08 Aligned_cols=65 Identities=29% Similarity=0.399 Sum_probs=53.6
Q ss_pred cCChHHHHHHHHhcC------chhhhccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhcc
Q 002151 375 NQDAIDAAIVSMLAD------PKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWN 440 (959)
Q Consensus 375 ~~~~i~~ai~~~~~~------~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~ 440 (959)
.+||.|.|++.++.. ....+..+++++.+||||++|||+++++ .++...+++|||||.|+++|+.
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 467889998877543 3456778999999999999999999998 3345777999999999999974
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.1e-07 Score=95.25 Aligned_cols=105 Identities=24% Similarity=0.364 Sum_probs=82.0
Q ss_pred HHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHH
Q 002151 501 TIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRL 580 (959)
Q Consensus 501 aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~L 580 (959)
+|++|++.|+++.++||+....+..+.+++|+..- |... ..|.+.++.+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~-----------------------------~~~~--~~k~~~~~~~ 84 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL-----------------------------YQGQ--SNKLIAFSDI 84 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE-----------------------------Eecc--cchHHHHHHH
Confidence 99999999999999999999999999999998521 1111 2344444444
Q ss_pred hh----CCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCC----chHHHHHH
Q 002151 581 QA----RKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPG----LSVIISAV 636 (959)
Q Consensus 581 q~----~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~----~~~I~~ai 636 (959)
.+ ....|.|+||+.||.+|++.|+++++|.++.+..+..||+++..+. |..+.+.+
T Consensus 85 ~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~ 148 (154)
T TIGR01670 85 LEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCELL 148 (154)
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHH
Confidence 32 3457999999999999999999999999888899999999997554 54444444
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.65 E-value=8.5e-08 Score=97.09 Aligned_cols=100 Identities=19% Similarity=0.249 Sum_probs=80.2
Q ss_pred HHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeec--ChhhHHHHH
Q 002151 500 ETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGV--FPEHKFEIV 577 (959)
Q Consensus 500 eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~--~Pe~K~~iV 577 (959)
.+|+.|++.|+++.++|+.+...+..+.+.+|+.. .|... .|+--..++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~-----------------------------~f~~~kpkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR-----------------------------FHEGIKKKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE-----------------------------EEecCCCCHHHHHHHH
Confidence 58999999999999999999999999999999952 11111 244444444
Q ss_pred HHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCC
Q 002151 578 KRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPG 628 (959)
Q Consensus 578 ~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~ 628 (959)
+.++-....|+|+||+.||.+|++.|++++||+++.+..+..||+|...++
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCC
Confidence 444433456999999999999999999999999999999999999886443
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.61 E-value=1e-07 Score=100.92 Aligned_cols=142 Identities=20% Similarity=0.281 Sum_probs=96.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCC--CCccccC--ccc------c-c------------
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMY--PSSALLG--EKK------D-T------------ 549 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l~g--~~~------~-~------------ 549 (959)
++-+++.++|++|++.|+++.+.||.....+..+++.+++..... +...+.. ... + .
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 377899999999999999999999999999999999999853210 0000000 000 0 0
Q ss_pred --c-------------CC---cchHHHHhhcCc-------eeecCh--hhHHHHHHHHhhC-C---CEEEEEcCCcCChh
Q 002151 550 --I-------------VG---LPVDDLIEKADG-------FAGVFP--EHKFEIVKRLQAR-K---HIVGMTGDGVNDAP 598 (959)
Q Consensus 550 --~-------------~~---~~~~~~i~~~~v-------far~~P--e~K~~iV~~Lq~~-g---~~V~m~GDGvNDap 598 (959)
. .. ..+.+.+.+..+ +..++| ..|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0 00 011111221111 112223 4788888887653 3 35899999999999
Q ss_pred hhhcCCeeEEecCchHHHHhhccccccCCCchHHHH
Q 002151 599 ALKVADIGIAVADSTDAARSASDIVLTEPGLSVIIS 634 (959)
Q Consensus 599 ALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ 634 (959)
|++.|++|+||++|.+.+|+.||+|...++=..+.+
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~ 213 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVE 213 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhh
Confidence 999999999999999999999999987655555544
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.7e-07 Score=100.07 Aligned_cols=144 Identities=23% Similarity=0.318 Sum_probs=99.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCC--CCccc-c---Ccc-----cc--------------
Q 002151 494 PRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMY--PSSAL-L---GEK-----KD-------------- 548 (959)
Q Consensus 494 lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l-~---g~~-----~~-------------- 548 (959)
+.+.+.++|+++++.|+++++.||.....+..+.+.+|+..... +...+ . ++. .+
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 67899999999999999999999999999999999999853110 00000 0 000 00
Q ss_pred -------cc------------CC---cchHHHHhhcC---------ceeecChh--hHHHHHHHHhhC-C---CEEEEEc
Q 002151 549 -------TI------------VG---LPVDDLIEKAD---------GFAGVFPE--HKFEIVKRLQAR-K---HIVGMTG 591 (959)
Q Consensus 549 -------~~------------~~---~~~~~~i~~~~---------vfar~~Pe--~K~~iV~~Lq~~-g---~~V~m~G 591 (959)
.. .. ..+.+.+++.. .+..+.|. .|..-++.+.+. | ..++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~G 180 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIG 180 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEC
Confidence 00 00 01112222111 11233343 377777777654 2 3589999
Q ss_pred CCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 592 DGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 592 DGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
||.||.+|++.|++|+||+++.+..|++||+|..+++=..+..+++
T Consensus 181 D~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 181 DSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 9999999999999999999999999999999988777777777664
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.5e-07 Score=97.40 Aligned_cols=114 Identities=23% Similarity=0.240 Sum_probs=86.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCC-----ccccCccccccCCcchHHHHhhcCcee
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPS-----SALLGEKKDTIVGLPVDDLIEKADGFA 566 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~-----~~l~g~~~~~~~~~~~~~~i~~~~vfa 566 (959)
.+++|++.+.++.++++|.+|+++||-...-+..+++++|+....-+. ..++| .+..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG------------------~v~g 137 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTG------------------RVVG 137 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEec------------------eeee
Confidence 589999999999999999999999999999999999999996431110 01222 1333
Q ss_pred e-cChhhHHHHHHHHhhC-CC---EEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccc
Q 002151 567 G-VFPEHKFEIVKRLQAR-KH---IVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVL 624 (959)
Q Consensus 567 r-~~Pe~K~~iV~~Lq~~-g~---~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL 624 (959)
. +..+.|.+.++.+.+. |. .+.++|||.||.|||+.|+.+|++...... +..|+...
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l-~~~a~~~~ 199 (212)
T COG0560 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKL-RALADVRI 199 (212)
T ss_pred eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHH-HHHHHHhc
Confidence 3 3447899988666653 54 489999999999999999999999744333 33555444
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.6e-07 Score=101.22 Aligned_cols=66 Identities=21% Similarity=0.213 Sum_probs=54.7
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 572 HKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 572 ~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
.|..-++.|.+. | ..|+++|||.||.+||+.|++|+||++|.+.+|++||+|..+++=..+..+++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 455556655543 3 45899999999999999999999999999999999999998777777777764
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=4e-07 Score=95.38 Aligned_cols=127 Identities=20% Similarity=0.241 Sum_probs=91.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.||+++.++.|+++ +++.++|+-....+..+.+++|+..- +.. .+...+.....+ +.-..|+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~-f~~-~~~~~~~~~i~~------------~~~~~p~~ 132 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTL-FCH-SLEVDEDGMITG------------YDLRQPDG 132 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchh-hcc-eEEECCCCeEEC------------ccccccch
Confidence 4689999999999999 99999999999999999999998521 111 110000000000 00124788
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccc-cccCCCchHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDI-VLTEPGLSVIISAV 636 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADi-vL~~~~~~~I~~ai 636 (959)
|...++.++..+..+.|+|||.||.+|.++|++|+..+.+.+.....++. ++ +++..+...+
T Consensus 133 k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 133 KRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred HHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 99999999988899999999999999999999999987654455555665 44 5566665544
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.54 E-value=5.4e-07 Score=98.48 Aligned_cols=152 Identities=21% Similarity=0.228 Sum_probs=105.5
Q ss_pred EeecCCC-CCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCC---------CCcccc-------------
Q 002151 487 LLPLFDP-PRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMY---------PSSALL------------- 543 (959)
Q Consensus 487 li~l~D~-lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~---------~~~~l~------------- 543 (959)
.+.-.|. +.+.++++|+++++.|+++.+.||.+...+..+.+++|+..... +...+.
T Consensus 13 TLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~ 92 (264)
T COG0561 13 TLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELL 92 (264)
T ss_pred CccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHH
Confidence 3333344 88999999999999999999999999999999999999964110 000000
Q ss_pred --------------Ccc---------------------------ccccC----------CcchHHHH---hh-----cCc
Q 002151 544 --------------GEK---------------------------KDTIV----------GLPVDDLI---EK-----ADG 564 (959)
Q Consensus 544 --------------g~~---------------------------~~~~~----------~~~~~~~i---~~-----~~v 564 (959)
..+ ..... ...+.+.. .+ ...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 172 (264)
T COG0561 93 ELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLT 172 (264)
T ss_pred HHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceE
Confidence 000 00000 00111111 11 011
Q ss_pred e-------eecCh--hhHHHHHHHHhh-CCCE---EEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchH
Q 002151 565 F-------AGVFP--EHKFEIVKRLQA-RKHI---VGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSV 631 (959)
Q Consensus 565 f-------ar~~P--e~K~~iV~~Lq~-~g~~---V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~ 631 (959)
+ ..+.| .+|..-++.|.+ .|-. |+++||+.||.+||+.|+.|||||++.+.+|+.||++...++-..
T Consensus 173 ~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~G 252 (264)
T COG0561 173 VSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDG 252 (264)
T ss_pred EEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchH
Confidence 1 23333 378888888876 3543 999999999999999999999999999999999998888888888
Q ss_pred HHHHHHH
Q 002151 632 IISAVLT 638 (959)
Q Consensus 632 I~~ai~~ 638 (959)
+..+++.
T Consensus 253 v~~~l~~ 259 (264)
T COG0561 253 VAEALEK 259 (264)
T ss_pred HHHHHHH
Confidence 8887763
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.5e-07 Score=101.60 Aligned_cols=66 Identities=15% Similarity=0.096 Sum_probs=54.1
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccc--cccCCCchHHHHHHH
Q 002151 572 HKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDI--VLTEPGLSVIISAVL 637 (959)
Q Consensus 572 ~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADi--vL~~~~~~~I~~ai~ 637 (959)
.|..-++.|.+. | ..|+++|||-||.+||+.|+.||||++|.+.+|++||. |..+++-..+..+|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 477777777554 3 45899999999999999999999999999999999996 665666666766664
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.47 E-value=5.7e-07 Score=95.66 Aligned_cols=139 Identities=21% Similarity=0.295 Sum_probs=94.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCC--CCccc-cCc--c------cc-------------
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMY--PSSAL-LGE--K------KD------------- 548 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l-~g~--~------~~------------- 548 (959)
.+.+.+.++|+++++.|+++++.||.+...+..+.+++|+..... +...+ ... + .+
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 367889999999999999999999999999999999999642110 00000 000 0 00
Q ss_pred ---cc-----------------CCcchHHHHhhcC---------ceeecCh--hhHHHHHHHHhhC-C---CEEEEEcCC
Q 002151 549 ---TI-----------------VGLPVDDLIEKAD---------GFAGVFP--EHKFEIVKRLQAR-K---HIVGMTGDG 593 (959)
Q Consensus 549 ---~~-----------------~~~~~~~~i~~~~---------vfar~~P--e~K~~iV~~Lq~~-g---~~V~m~GDG 593 (959)
.. ..+...++++... .+..+.| .+|..-++.+.++ | ..|.++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 00 0000111111111 1223334 3788888877653 3 469999999
Q ss_pred cCChhhhhcCCeeEEecCchHHHHhhccccccCCCchH
Q 002151 594 VNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSV 631 (959)
Q Consensus 594 vNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~ 631 (959)
.||.+|++.|++|+||+++.+..|+.||.|..+++-..
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G 212 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEG 212 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCc
Confidence 99999999999999999999999999999987666655
|
catalyze the same reaction as SPP. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=4.1e-07 Score=93.82 Aligned_cols=110 Identities=23% Similarity=0.320 Sum_probs=83.7
Q ss_pred HHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHH
Q 002151 500 ETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKR 579 (959)
Q Consensus 500 eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~ 579 (959)
.+|+.|++.|+++.++||.....+..+++++|+.. +|.. .++|...++.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~-----------------------------~f~g--~~~k~~~l~~ 103 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH-----------------------------LYQG--QSNKLIAFSD 103 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce-----------------------------eecC--CCcHHHHHHH
Confidence 69999999999999999999999999999999842 1111 2345555544
Q ss_pred H-hhCC---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCC----CchHHHHHHHHHH
Q 002151 580 L-QARK---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEP----GLSVIISAVLTSR 640 (959)
Q Consensus 580 L-q~~g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~----~~~~I~~ai~~gR 640 (959)
+ ++.| ..|+|+||+.||.+|++.|+++++++++.+..+..||+++-.+ .+..+.+.+...|
T Consensus 104 ~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 104 LLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred HHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 4 3333 4699999999999999999999999988888888999998532 2444555554433
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.43 E-value=6.4e-07 Score=93.30 Aligned_cols=117 Identities=27% Similarity=0.413 Sum_probs=84.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+.. .+...... .+.... +.+.+-...|..
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~-~~~g~~----------~p~~~~~~~~~~ 147 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVF-DEKGFI----------QPDGIVRVTFDN 147 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEE-cCCCeE----------ecceeeEEcccc
Confidence 589999999999999999999999999999999999999742 11111111 100000 001222345677
Q ss_pred HHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhcc
Q 002151 573 KFEIVKRLQAR----KHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASD 621 (959)
Q Consensus 573 K~~iV~~Lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aAD 621 (959)
|.++++.+.++ .+.+.|+||+.||.+|++.|+++++++.+....+.|+|
T Consensus 148 k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 148 KGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 88787776543 23599999999999999999999999865555666666
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.42 E-value=0.00016 Score=85.20 Aligned_cols=101 Identities=16% Similarity=0.208 Sum_probs=76.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
|++|++.+.++++++.|+++.++|+-+...+..+++++|+.+ .++.+++ ..++.|+.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd-----~Vigsd~------------------~~~~kg~~ 128 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD-----GVFASDG------------------TTNLKGAA 128 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC-----EEEeCCC------------------ccccCCch
Confidence 588999999999999999999999999999999999999732 2222211 12456777
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAAR 617 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak 617 (959)
|.+.++.....+ -+.++||..||.|+++.|+-.++++.+...++
T Consensus 129 K~~~l~~~l~~~-~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 129 KAAALVEAFGER-GFDYAGNSAADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred HHHHHHHHhCcc-CeeEecCCHHHHHHHHhCCCeEEECCCHHHHH
Confidence 866555332222 25789999999999999999999986554444
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=6.9e-07 Score=97.69 Aligned_cols=66 Identities=17% Similarity=0.163 Sum_probs=52.3
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhcc--ccccCCCchHHHHHHH
Q 002151 572 HKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASD--IVLTEPGLSVIISAVL 637 (959)
Q Consensus 572 ~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aAD--ivL~~~~~~~I~~ai~ 637 (959)
.|..-++.|.+. | ..|+++|||-||.+||+.|+.|+||++|.+..|+.|| .|..+++=..+..+++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 466666665543 3 4589999999999999999999999999999999988 5666666666666664
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=2e-06 Score=94.22 Aligned_cols=66 Identities=23% Similarity=0.332 Sum_probs=54.2
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 572 HKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 572 ~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
.|..-++.+.++ | .-|+++||+.||.+|++.|++|+|||++.+..|+.||+|..+++=..+..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466656555433 3 35899999999999999999999999999999999999998877777777764
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.30 E-value=3.8e-06 Score=88.90 Aligned_cols=136 Identities=13% Similarity=0.051 Sum_probs=88.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCC-ccccCccccccCCcchHHHHhhcCce--eec
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPS-SALLGEKKDTIVGLPVDDLIEKADGF--AGV 568 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~-~~l~g~~~~~~~~~~~~~~i~~~~vf--ar~ 568 (959)
-+++|++++.++.|++.|+++.++||.....+..+.+.++.....+.. ....|.... ... .....+ ..-
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~-~~~-------p~~~~~~~~~~ 140 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIH-IDW-------PHPCDGTCQNQ 140 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeE-EeC-------CCCCccccccC
Confidence 479999999999999999999999999999898888887543222111 111111110 000 000000 001
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHH--hhccccccCCCchHHHHHHH
Q 002151 569 FPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAAR--SASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 569 ~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak--~aADivL~~~~~~~I~~ai~ 637 (959)
....|..+++.++.....|.|+|||.||.+|++.||+++|=+.-.+-.+ .-+.+.+ ++|..+...++
T Consensus 141 cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 141 CGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 1357999999998888889999999999999999999887542111111 1133333 56777766654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.30 E-value=2e-06 Score=102.86 Aligned_cols=52 Identities=21% Similarity=0.423 Sum_probs=47.5
Q ss_pred EEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 586 IVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 586 ~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
-|+++|||.||.+||+.|+.|||||+|.+..|++||+|..+++=..+..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 5899999999999999999999999999999999999987777777777765
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.1e-06 Score=92.11 Aligned_cols=66 Identities=21% Similarity=0.214 Sum_probs=54.6
Q ss_pred hhHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHH
Q 002151 571 EHKFEIVKRLQAR----KHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 571 e~K~~iV~~Lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai 636 (959)
..|..-++.|.+. .+.+.++||+-||.+||+.|+.|+||+++++..+..||++....+=..+.++|
T Consensus 185 vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 185 VSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp SSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred CCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 4788888887652 35789999999999999999999999999999999999999876556666543
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.3e-06 Score=90.24 Aligned_cols=92 Identities=27% Similarity=0.343 Sum_probs=70.3
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh-h--
Q 002151 496 HDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE-H-- 572 (959)
Q Consensus 496 ~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe-~-- 572 (959)
+++++.|+.++++|++++++||+....+..+++.+|+.... +.+.+... .. +....++.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~-----v~~~~~~~-~~--------~~~~~~~~~~~~~~~ 157 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN-----VIGNELFD-NG--------GGIFTGRITGSNCGG 157 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG-----EEEEEEEC-TT--------CCEEEEEEEEEEESH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-----EEEEeeee-cc--------cceeeeeECCCCCCc
Confidence 78889999999999999999999999999999999996421 11111100 00 11235566665 4
Q ss_pred HHHHHHHH------hhCCCEEEEEcCCcCChhhhh
Q 002151 573 KFEIVKRL------QARKHIVGMTGDGVNDAPALK 601 (959)
Q Consensus 573 K~~iV~~L------q~~g~~V~m~GDGvNDapALk 601 (959)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 158 K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 158 KAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 455789999999999999986
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.23 E-value=2.6e-06 Score=92.59 Aligned_cols=63 Identities=22% Similarity=0.267 Sum_probs=53.2
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHH
Q 002151 572 HKFEIVKRLQAR----KHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIIS 634 (959)
Q Consensus 572 ~K~~iV~~Lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ 634 (959)
.|..-++.+.+. ...++++||+.||.+|++.|+.|+||+++.+..++.||++..+++-..+..
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~ 254 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVAL 254 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhh
Confidence 588778777654 246999999999999999999999999999999999999987766555544
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.4e-06 Score=85.15 Aligned_cols=110 Identities=22% Similarity=0.267 Sum_probs=76.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
.+-|+++|.++.|++.|.+|.++||--...+..+|.++||+....-...+.=..+....+-+..+ .=+.-.-
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~--------ptsdsgg 159 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNE--------PTSDSGG 159 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCC--------ccccCCc
Confidence 35689999999999999999999999999999999999997522111111100000000000000 0011247
Q ss_pred HHHHHHHHhhC--CCEEEEEcCCcCChhhhhcCCeeEEec
Q 002151 573 KFEIVKRLQAR--KHIVGMTGDGVNDAPALKVADIGIAVA 610 (959)
Q Consensus 573 K~~iV~~Lq~~--g~~V~m~GDGvNDapALk~AdVGIamg 610 (959)
|.+++..+++. -..++|+|||+||.+|...||-=|+.+
T Consensus 160 Ka~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 160 KAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 99999999885 347999999999999999977666654
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.19 E-value=8.7e-06 Score=86.55 Aligned_cols=131 Identities=20% Similarity=0.289 Sum_probs=84.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCC-CCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGT-NMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~-~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
+++|++++.++.|++.|+++.++||.....+..+.+.+|+.. +.+........+ ....+... .... ..+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~-g~~~g~~~------~~~~--~~~~ 154 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS-GEYAGFDE------NEPT--SRSG 154 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC-CcEECccC------CCcc--cCCc
Confidence 478999999999999999999999999999999999999963 111100000000 00000000 0000 1124
Q ss_pred hHHHHHHHHhhC-C-CEEEEEcCCcCChhhhhc--CCeeEEecCc--hHHHHhhccccccCCCchHHHH
Q 002151 572 HKFEIVKRLQAR-K-HIVGMTGDGVNDAPALKV--ADIGIAVADS--TDAARSASDIVLTEPGLSVIIS 634 (959)
Q Consensus 572 ~K~~iV~~Lq~~-g-~~V~m~GDGvNDapALk~--AdVGIamg~g--td~Ak~aADivL~~~~~~~I~~ 634 (959)
.|.+.++.+.++ | ..+.|+||+.||..|.++ ++++++.|.+ .+.....+|+++ +++..+..
T Consensus 155 ~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~ 221 (224)
T PLN02954 155 GKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIE 221 (224)
T ss_pred cHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHH
Confidence 477777777654 2 468899999999999777 6777776632 233345689988 45666554
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.2e-05 Score=87.47 Aligned_cols=66 Identities=24% Similarity=0.244 Sum_probs=50.2
Q ss_pred hHHHHHHHHhhC------CCEEEEEcCCcCChhhhhcCCeeEEecCch---HHHHhh---ccccccCCCchHHHHHHH
Q 002151 572 HKFEIVKRLQAR------KHIVGMTGDGVNDAPALKVADIGIAVADST---DAARSA---SDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 572 ~K~~iV~~Lq~~------g~~V~m~GDGvNDapALk~AdVGIamg~gt---d~Ak~a---ADivL~~~~~~~I~~ai~ 637 (959)
.|..-++.+.+. ...|.++||+.||.+||+.|+.||||+++. +..|+. +++|...++=..+..+++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 455555555432 456999999999999999999999999887 467876 457776777777777664
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.2e-05 Score=77.95 Aligned_cols=114 Identities=23% Similarity=0.396 Sum_probs=88.5
Q ss_pred HHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHH
Q 002151 500 ETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKR 579 (959)
Q Consensus 500 eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~ 579 (959)
-.|+.+.++||++-+|||.+......=++++||.. ...| -++|....+.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~------~~qG-------------------------~~dK~~a~~~ 90 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH------LYQG-------------------------ISDKLAAFEE 90 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce------eeec-------------------------hHhHHHHHHH
Confidence 46899999999999999999999999999999942 1222 3577777666
Q ss_pred HhhC----CCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCC----chHHHHHHHHHHHHHH
Q 002151 580 LQAR----KHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPG----LSVIISAVLTSRAIFQ 644 (959)
Q Consensus 580 Lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~----~~~I~~ai~~gR~~~~ 644 (959)
|.++ -.-|+++||-.||-|++++...++|+.++-.-.++.||+|+...+ ++.+.+.|..++..+.
T Consensus 91 L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d 163 (170)
T COG1778 91 LLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLD 163 (170)
T ss_pred HHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHH
Confidence 6543 346999999999999999999999999998888889999987544 4444455555544443
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.03 E-value=2.9e-05 Score=85.22 Aligned_cols=66 Identities=24% Similarity=0.183 Sum_probs=49.1
Q ss_pred hHHHHHHHHhh-------CCCEEEEEcCCcCChhhhhcCCeeEEecCch-H--H---HHhhccccccCCCchHHHHHHH
Q 002151 572 HKFEIVKRLQA-------RKHIVGMTGDGVNDAPALKVADIGIAVADST-D--A---ARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 572 ~K~~iV~~Lq~-------~g~~V~m~GDGvNDapALk~AdVGIamg~gt-d--~---Ak~aADivL~~~~~~~I~~ai~ 637 (959)
+|..-++.|.+ ....|+++|||-||.+||+.|++|||||++. + . -+..+|++....+-..+.++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 45555555543 2356999999999999999999999999544 2 1 3447899888877777877765
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.02 E-value=8.8e-06 Score=82.94 Aligned_cols=101 Identities=23% Similarity=0.301 Sum_probs=70.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
+++|++.+.++.+++.|+++.++||.....+..+++.+|+.. .+. ..+...+...+.+.. ..-....++.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~-~~~~~~~~g~~~g~~--------~~~~~~~~~~ 142 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFA-NRLEFDDNGLLTGPI--------EGQVNPEGEC 142 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-hee-eeEEECCCCEEeCcc--------CCcccCCcch
Confidence 368999999999999999999999999999999999999852 111 111000000000000 0001245688
Q ss_pred HHHHHHHHhhC----CCEEEEEcCCcCChhhhhcC
Q 002151 573 KFEIVKRLQAR----KHIVGMTGDGVNDAPALKVA 603 (959)
Q Consensus 573 K~~iV~~Lq~~----g~~V~m~GDGvNDapALk~A 603 (959)
|.+.++.+++. ...+.++|||.||.+|++.|
T Consensus 143 K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 143 KGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 99999987654 34689999999999999876
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.5e-05 Score=81.96 Aligned_cols=114 Identities=15% Similarity=0.049 Sum_probs=76.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceee-cCh
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAG-VFP 570 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar-~~P 570 (959)
-++++++.+.++.|++.|+++.++|+.+......+.+..|+... -..++.++..-. ...-+.-...++.++.. ...
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~i~~~~~~~~-~~g~~~~~~~~~~~~~~~~~g 147 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDV--FIEIYSNPASFD-NDGRHIVWPHHCHGCCSCPCG 147 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhh--eeEEeccCceEC-CCCcEEEecCCCCccCcCCCC
Confidence 37899999999999999999999999999999999999888531 112222111000 00000000000111111 122
Q ss_pred hhHHHHHHHHhhC-CCEEEEEcCCcCChhhhhcCCeeEE
Q 002151 571 EHKFEIVKRLQAR-KHIVGMTGDGVNDAPALKVADIGIA 608 (959)
Q Consensus 571 e~K~~iV~~Lq~~-g~~V~m~GDGvNDapALk~AdVGIa 608 (959)
..|.++++.++++ ...+.|+|||.||..|.++||+-.|
T Consensus 148 ~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 148 CCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 3599999999887 8889999999999999999987544
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.96 E-value=2.9e-05 Score=82.44 Aligned_cols=132 Identities=14% Similarity=0.057 Sum_probs=84.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCC--CccccCccccccCCcchHHHHhhcCc--e-ee
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYP--SSALLGEKKDTIVGLPVDDLIEKADG--F-AG 567 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~--~~~l~g~~~~~~~~~~~~~~i~~~~v--f-ar 567 (959)
+++||+.+.++.|++.|+++.++||-....+..+.+++ +...... .....|+... ... ..... + .+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~-~~k-------p~p~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYIT-ITW-------PHPCDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeE-Eec-------cCCcccccccc
Confidence 68999999999999999999999999999999999888 6431110 0111121110 000 00000 0 00
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHH--hhccccccCCCchHHHHHH
Q 002151 568 VFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAAR--SASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 568 ~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak--~aADivL~~~~~~~I~~ai 636 (959)
+ ...|.++++.++.....|.|+|||.||.+|.++||+.++-+.-.+.++ ..+.+.+ ++|..+...+
T Consensus 145 ~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 145 C-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred C-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 0 134888999888777789999999999999999999777431112211 2234444 5577666655
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.93 E-value=6.9e-05 Score=82.40 Aligned_cols=66 Identities=24% Similarity=0.298 Sum_probs=49.6
Q ss_pred hHHHHHHHHhh----CC-CEEEEEcCCcCChhhhhcCCeeEEecCchHHHH----hhc-cccc--cCCCchHHHHHHH
Q 002151 572 HKFEIVKRLQA----RK-HIVGMTGDGVNDAPALKVADIGIAVADSTDAAR----SAS-DIVL--TEPGLSVIISAVL 637 (959)
Q Consensus 572 ~K~~iV~~Lq~----~g-~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak----~aA-DivL--~~~~~~~I~~ai~ 637 (959)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|++|++|.+..| .+| +.+. ..++=..+..+++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 45555555543 24 789999999999999999999999999999988 666 5666 3444556666654
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=4.8e-05 Score=80.82 Aligned_cols=125 Identities=17% Similarity=0.172 Sum_probs=89.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecC--
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVF-- 569 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~-- 569 (959)
.++.||+.+.++.|++.|+++.++||........+.+++|+... -..++.++. +.+..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~~~~~~~------------------~~~~kp~ 151 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADY--FSVVIGGDS------------------LPNKKPD 151 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccC--ccEEEcCCC------------------CCCCCcC
Confidence 46889999999999999999999999999999999999998532 111221111 11222
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEecC----chHHHHhhccccccCCCchHHHHHHHH
Q 002151 570 PEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADI-GIAVAD----STDAARSASDIVLTEPGLSVIISAVLT 638 (959)
Q Consensus 570 Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdV-GIamg~----gtd~Ak~aADivL~~~~~~~I~~ai~~ 638 (959)
|+-=..+.+.++.....+.|+||+.||..|.++|++ +|.+.. ..+.....+|+++ ++++.+...+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 152 PAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred hHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 332234455555555679999999999999999998 666542 2344455788888 778888877754
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.91 E-value=2.4e-05 Score=81.69 Aligned_cols=108 Identities=19% Similarity=0.154 Sum_probs=77.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
.++++++.+.++.+++.|+++.++||-....+..+++.+|+..- .......++ .....+.. . --.+.++
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~-~g~~~g~~--------~-~~~~~g~ 154 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESE-DGIYTGNI--------D-GNNCKGE 154 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcC-CCEEeCCc--------c-CCCCCCh
Confidence 46899999999999999999999999999999999999998521 111111000 00000000 0 0123467
Q ss_pred hHHHHHHHHhh-CCC---EEEEEcCCcCChhhhhcCCeeEEec
Q 002151 572 HKFEIVKRLQA-RKH---IVGMTGDGVNDAPALKVADIGIAVA 610 (959)
Q Consensus 572 ~K~~iV~~Lq~-~g~---~V~m~GDGvNDapALk~AdVGIamg 610 (959)
.|.+.++.+.+ .|. .+.++||+.||.|+++.|+.++++.
T Consensus 155 ~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 155 GKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred HHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 88888877654 342 6889999999999999999999986
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.76 E-value=6.7e-05 Score=71.92 Aligned_cols=118 Identities=16% Similarity=0.076 Sum_probs=78.1
Q ss_pred ecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeec
Q 002151 489 PLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGV 568 (959)
Q Consensus 489 ~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~ 568 (959)
.-..++++++++.+++|++.|++++++||.....+....+++|+... ...++......................+.+-
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIYYPKEGLFLGGGPFDIGKP 97 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhhcccccccccccccccCCC
Confidence 34458999999999999999999999999999999999999987321 1111111100000000000001111234456
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhc-CCeeEE
Q 002151 569 FPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKV-ADIGIA 608 (959)
Q Consensus 569 ~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~-AdVGIa 608 (959)
.|+.+..+.+.+....+.+.++||+.||.+|++. ..-+|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 98 NPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 6777777777776666789999999999999998 555554
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00015 Score=77.16 Aligned_cols=127 Identities=17% Similarity=0.176 Sum_probs=94.5
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecCh
Q 002151 491 FDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFP 570 (959)
Q Consensus 491 ~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~P 570 (959)
..++-|+++++++.|+++|++..++|++....+..+.+..|+..- -..+..++.. -...-.|
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~--F~~i~g~~~~----------------~~~KP~P 148 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADY--FDVIVGGDDV----------------PPPKPDP 148 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccc--cceEEcCCCC----------------CCCCcCH
Confidence 346789999999999999999999999999999999999999632 1111111111 0122346
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCC---eeEEecC--chHHHHhhccccccCCCchHHHHHHH
Q 002151 571 EHKFEIVKRLQARKHIVGMTGDGVNDAPALKVAD---IGIAVAD--STDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 571 e~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~Ad---VGIamg~--gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
+......+.+....+.+.||||..||..|=|+|+ ||+..|. +.......+|.++ ++++.+...+.
T Consensus 149 ~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l~ 218 (220)
T COG0546 149 EPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALLA 218 (220)
T ss_pred HHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHHh
Confidence 6666777776655457999999999999999998 7777773 4567777799999 66777766543
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00015 Score=76.06 Aligned_cols=124 Identities=15% Similarity=0.131 Sum_probs=84.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.||+.+++++|++.|+++.++||.....+...-+.+|+..- -..++.+++. ...+-.|+-
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~--f~~i~~~~~~----------------~~~KP~~~~ 136 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPL--FDHVIGSDEV----------------PRPKPAPDI 136 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhh--eeeEEecCcC----------------CCCCCChHH
Confidence 6889999999999999999999999999888888888888531 1112211110 012223333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE-e--c--CchHHHHhhccccccCCCchHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIA-V--A--DSTDAARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIa-m--g--~gtd~Ak~aADivL~~~~~~~I~~ai 636 (959)
=.++.+.++-....+.|+||+.+|..+-++|++... + | +..+..++.+|+++ +++..+...+
T Consensus 137 ~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 137 VREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 334444454445679999999999999999998643 3 3 23345567799988 5566666544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00047 Score=75.79 Aligned_cols=125 Identities=15% Similarity=0.144 Sum_probs=81.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
.++.|++.++++.|++.|+++.++||-....+..+..+.|+... -..++.+++.. ...-.|+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~--f~~i~~~d~~~----------------~~Kp~p~ 161 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRY--FRWIIGGDTLP----------------QKKPDPA 161 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhh--CeEEEecCCCC----------------CCCCCcH
Confidence 47889999999999999999999999998888888888887431 11122211100 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEe--c--CchHHHHhhccccccCCCchHHHHHH
Q 002151 572 HKFEIVKRLQARKHIVGMTGDGVNDAPALKVADI-GIAV--A--DSTDAARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 572 ~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdV-GIam--g--~gtd~Ak~aADivL~~~~~~~I~~ai 636 (959)
-=..+.+.+.-....+.|+||+.||..|.++|++ .+++ | ...+.....+|.++ +++..+..++
T Consensus 162 ~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 162 ALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred HHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 1122333333234579999999999999999997 3444 3 22333455789888 5577666543
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00053 Score=72.40 Aligned_cols=124 Identities=18% Similarity=0.124 Sum_probs=83.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.||+.+.++.|++.|+++.++||.....+..+-+.+|+..- -..++.+++.. ...-.|+-
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~--f~~i~~~~~~~----------------~~Kp~p~~ 143 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEF--FDVVITLDDVE----------------HAKPDPEP 143 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhc--eeEEEecCcCC----------------CCCCCcHH
Confidence 4779999999999999999999999999999998999998531 11222211100 11222333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee---EEecC-c-hHHHHhhccccccCCCchHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG---IAVAD-S-TDAARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG---Iamg~-g-td~Ak~aADivL~~~~~~~I~~ai 636 (959)
=.++.+.+.-....+.|+||..+|..|-++|++- +.-|. . .+.....+|+++ +++..+...+
T Consensus 144 ~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 144 VLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 3344444443445689999999999999999984 33332 2 223345688887 6677776654
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00097 Score=71.14 Aligned_cols=43 Identities=16% Similarity=0.183 Sum_probs=38.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCC
Q 002151 491 FDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMG 533 (959)
Q Consensus 491 ~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 533 (959)
.+..-+++.++|++|++.|++++++||.....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3455567999999999999999999999999999999999984
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00061 Score=73.81 Aligned_cols=146 Identities=15% Similarity=0.146 Sum_probs=92.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCC----CCc-cccCc-cc------------------
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMY----PSS-ALLGE-KK------------------ 547 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----~~~-~l~g~-~~------------------ 547 (959)
.+..|...++++++++.|+.++..||......+.+.+++++....+ +.. +..+. ..
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 4567889999999999999999999999999999999888754310 001 10000 00
Q ss_pred -------ccc-----------------CCcc----h---HHHHhhc--Cc---ee-----ecCh--hhHHHHHHHHhhC-
Q 002151 548 -------DTI-----------------VGLP----V---DDLIEKA--DG---FA-----GVFP--EHKFEIVKRLQAR- 583 (959)
Q Consensus 548 -------~~~-----------------~~~~----~---~~~i~~~--~v---fa-----r~~P--e~K~~iV~~Lq~~- 583 (959)
..+ .... + .+.+.+. .+ ++ .+.| ..|..-++.+.++
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 000 0000 1 1111111 11 11 2344 4788888888664
Q ss_pred ---CCEEEEEcCCcCChhhhhc-CCeeEEecCchHHHHhhcc-------ccccCCCchHHHHHHH
Q 002151 584 ---KHIVGMTGDGVNDAPALKV-ADIGIAVADSTDAARSASD-------IVLTEPGLSVIISAVL 637 (959)
Q Consensus 584 ---g~~V~m~GDGvNDapALk~-AdVGIamg~gtd~Ak~aAD-------ivL~~~~~~~I~~ai~ 637 (959)
...|.++||+.||.+|++. ++.|++|+++.+..++.+| ++--...-+.+.++++
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3569999999999999998 7799999999988886543 4333333445555543
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00077 Score=70.87 Aligned_cols=120 Identities=15% Similarity=0.147 Sum_probs=79.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecCh--
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFP-- 570 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~P-- 570 (959)
++.|++.++++.|++.|+++.++|+-....+..+.++.|+... -..++.+++ ..+..|
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~~~~~~~------------------~~~~Kp~p 144 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKY--FSVLIGGDS------------------LAQRKPHP 144 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhh--CcEEEecCC------------------CCCCCCCh
Confidence 5889999999999999999999999999999999999998532 112222111 111122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE-e--cCc--hHHHHhhccccccCCCchHHHH
Q 002151 571 EHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIA-V--ADS--TDAARSASDIVLTEPGLSVIIS 634 (959)
Q Consensus 571 e~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIa-m--g~g--td~Ak~aADivL~~~~~~~I~~ 634 (959)
+-=.+..+.+.-....+.|+||..||..|.++|++-.. + |.+ .......+|+++ +++..+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 145 DPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 21122333333334569999999999999999998654 3 322 123334688887 55666543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0014 Score=69.50 Aligned_cols=120 Identities=15% Similarity=0.130 Sum_probs=79.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
-+|.||+.++++.|++.|+++.++|+........+.+++|+..- -..++.+++. ...+-.|+
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~----------------~~~Kp~~~ 152 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDY--FDALASAEKL----------------PYSKPHPE 152 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhc--ccEEEEcccC----------------CCCCCCHH
Confidence 36789999999999999999999999999999999999998532 1222222111 01122232
Q ss_pred hHHHHHHHHhhCC---CEEEEEcCCcCChhhhhcCCeeEEe-cCc---hHHHHhhccccccCCCchHHHH
Q 002151 572 HKFEIVKRLQARK---HIVGMTGDGVNDAPALKVADIGIAV-ADS---TDAARSASDIVLTEPGLSVIIS 634 (959)
Q Consensus 572 ~K~~iV~~Lq~~g---~~V~m~GDGvNDapALk~AdVGIam-g~g---td~Ak~aADivL~~~~~~~I~~ 634 (959)
-+-+.+++.| +.|.|+||..||+.|-++|++.... ..+ .+.-...+|+++ .+|..+..
T Consensus 153 ---~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~~ 217 (222)
T PRK10826 153 ---VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELTA 217 (222)
T ss_pred ---HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHhh
Confidence 2233333333 4589999999999999999987543 222 222233578877 45665543
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.00072 Score=72.60 Aligned_cols=67 Identities=18% Similarity=0.212 Sum_probs=53.7
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhcc----ccccCCCchHHHHHHH
Q 002151 571 EHKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASD----IVLTEPGLSVIISAVL 637 (959)
Q Consensus 571 e~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aAD----ivL~~~~~~~I~~ai~ 637 (959)
..|...++.|.++ | ..|+++||+.||.+|++.|+.||+|+++.+..|+.|| +|...++=..+.++|.
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 3677778877653 3 2588999999999999999999999999999999999 6655555556666664
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0023 Score=70.04 Aligned_cols=138 Identities=12% Similarity=0.109 Sum_probs=83.5
Q ss_pred CCCcchHHHHHHHHh-CCCeEEEEcCCCcHHHHHHHHHhCCC---CCCC-----CCc----ccc----------------
Q 002151 493 PPRHDSAETIRRALD-LGVSVKMITGDQLAIGKETGRRLGMG---TNMY-----PSS----ALL---------------- 543 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~-aGI~v~miTGD~~~tA~~ia~~lGi~---~~~~-----~~~----~l~---------------- 543 (959)
.+-+++.++|++|++ .|+.++++||..........+.+++. .+.. ... .+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 344789999999998 79999999999999988887766642 1100 000 000
Q ss_pred ---Cccc-----------cccCC--cchHHHH---h-hcC--------ceeecCh--hhHHHHHHHHhhC----CCEEEE
Q 002151 544 ---GEKK-----------DTIVG--LPVDDLI---E-KAD--------GFAGVFP--EHKFEIVKRLQAR----KHIVGM 589 (959)
Q Consensus 544 ---g~~~-----------~~~~~--~~~~~~i---~-~~~--------vfar~~P--e~K~~iV~~Lq~~----g~~V~m 589 (959)
|... ..... ..+.++. . ... .+-.+.| .+|..-|+.+.+. ...|.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 0000 00000 0011111 0 111 1223334 3788877776543 356889
Q ss_pred EcCCcCChhhhhcC----CeeEEecCchHHHHhhccccccCCCchHHHHHH
Q 002151 590 TGDGVNDAPALKVA----DIGIAVADSTDAARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 590 ~GDGvNDapALk~A----dVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai 636 (959)
+||+.||.+|++.+ +.||+||++. ..|++.|. +...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLA--GVPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCC--CHHHHHHHH
Confidence 99999999999999 9999999764 35778784 444444433
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.006 Score=66.45 Aligned_cols=128 Identities=13% Similarity=0.082 Sum_probs=85.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCC----------CCccccCccccccCCcchHHHHhh
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMY----------PSSALLGEKKDTIVGLPVDDLIEK 561 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----------~~~~l~g~~~~~~~~~~~~~~i~~ 561 (959)
-++|||+.+.++.|++.|+++.++||--...+..+.+++|+..... ...+++|....
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P------------- 186 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGP------------- 186 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCC-------------
Confidence 3689999999999999999999999999999999999999852210 01122221000
Q ss_pred cCceeecChhhHHHHHHH-----Hh--hCCCEEEEEcCCcCChhhhhcC---CeeEEec--C-----chHHHHhhccccc
Q 002151 562 ADGFAGVFPEHKFEIVKR-----LQ--ARKHIVGMTGDGVNDAPALKVA---DIGIAVA--D-----STDAARSASDIVL 624 (959)
Q Consensus 562 ~~vfar~~Pe~K~~iV~~-----Lq--~~g~~V~m~GDGvNDapALk~A---dVGIamg--~-----gtd~Ak~aADivL 624 (959)
-+....|.+.+.. ++ .....|.|+|||.||++|-.-. +-=+.+| + --+.=+++=||||
T Consensus 187 -----~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl 261 (277)
T TIGR01544 187 -----LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVL 261 (277)
T ss_pred -----cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEE
Confidence 0011345554432 22 2235688999999999996544 2234444 2 1345567889999
Q ss_pred cCCCchHHHHHHH
Q 002151 625 TEPGLSVIISAVL 637 (959)
Q Consensus 625 ~~~~~~~I~~ai~ 637 (959)
.+|.=-.++.+|.
T Consensus 262 ~~D~t~~v~~~il 274 (277)
T TIGR01544 262 VQDETLEVANSIL 274 (277)
T ss_pred ECCCCchHHHHHH
Confidence 9998777776654
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0028 Score=67.05 Aligned_cols=126 Identities=17% Similarity=0.147 Sum_probs=80.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
.++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+....+-..++.+.+.. ..+-.|+
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~----------------~~KP~p~ 149 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA----------------AGRPAPD 149 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC----------------CCCCCHH
Confidence 479999999999999999999999999999999999999985211122222222110 0111222
Q ss_pred hHHHHHHHHhhC-CCEEEEEcCCcCChhhhhcCCeeE--EecCch----HHHHhhccccccCCCchHHHHH
Q 002151 572 HKFEIVKRLQAR-KHIVGMTGDGVNDAPALKVADIGI--AVADST----DAARSASDIVLTEPGLSVIISA 635 (959)
Q Consensus 572 ~K~~iV~~Lq~~-g~~V~m~GDGvNDapALk~AdVGI--amg~gt----d~Ak~aADivL~~~~~~~I~~a 635 (959)
-=....+.+.-. ...+.|+||+.+|..|-++|++.. ++..|. ......+|.++ ++++.+...
T Consensus 150 ~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~~ 218 (220)
T TIGR03351 150 LILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPAL 218 (220)
T ss_pred HHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHHh
Confidence 111222222222 256999999999999999999986 332322 12233577777 556655443
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0027 Score=67.95 Aligned_cols=124 Identities=13% Similarity=0.085 Sum_probs=83.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.||+.+.++.|++.|+++.++|+.+...+..+-++.|+... -..++.+++. ....-.|+-
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~--f~~i~~~~~~----------------~~~KP~p~~ 156 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQR--CAVLIGGDTL----------------AERKPHPLP 156 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhc--ccEEEecCcC----------------CCCCCCHHH
Confidence 5789999999999999999999999998888888888887431 1112221110 012223433
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeE-Ee--cCc--h-HHHHhhccccccCCCchHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGI-AV--ADS--T-DAARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGI-am--g~g--t-d~Ak~aADivL~~~~~~~I~~ai 636 (959)
=..+.+.+.-....+.|+||+.||..|-++|++-. ++ |.. . ......+|+++ +++..|.+.+
T Consensus 157 ~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~ 224 (229)
T PRK13226 157 LLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPA 224 (229)
T ss_pred HHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHh
Confidence 34455555544567999999999999999998764 33 221 1 22334689988 5677665544
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.005 Score=65.30 Aligned_cols=38 Identities=21% Similarity=0.250 Sum_probs=35.4
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCC
Q 002151 496 HDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMG 533 (959)
Q Consensus 496 ~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 533 (959)
+.++++|++++++||+++++||.....+..+.+.+|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999985
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0045 Score=65.31 Aligned_cols=106 Identities=13% Similarity=0.040 Sum_probs=75.0
Q ss_pred CCCcchHHHHH-HHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 493 PPRHDSAETIR-RALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 493 ~lr~~v~eaI~-~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
.++|++.++|+ .+++.|++++++|+=....+..+++..|+... .. +.|.+++...+.. + .=..+.-+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~---~~-~i~t~le~~~gg~----~----~g~~c~g~ 161 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR---LN-LIASQIERGNGGW----V----LPLRCLGH 161 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc---Cc-EEEEEeEEeCCce----E----cCccCCCh
Confidence 47899999996 78889999999999999999999998665221 11 2233332111100 0 01235678
Q ss_pred hHHHHHHHHh-hCCCEEEEEcCCcCChhhhhcCCeeEEec
Q 002151 572 HKFEIVKRLQ-ARKHIVGMTGDGVNDAPALKVADIGIAVA 610 (959)
Q Consensus 572 ~K~~iV~~Lq-~~g~~V~m~GDGvNDapALk~AdVGIamg 610 (959)
+|.+-++..- ......-+=||..||.|||+.||-.+++.
T Consensus 162 ~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 162 EKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 9988777543 22334568899999999999999999996
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0058 Score=64.48 Aligned_cols=106 Identities=13% Similarity=0.033 Sum_probs=75.2
Q ss_pred CCCcchHHHH-HHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCc-eeecCh
Q 002151 493 PPRHDSAETI-RRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADG-FAGVFP 570 (959)
Q Consensus 493 ~lr~~v~eaI-~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~v-far~~P 570 (959)
+++|++.+.| +.+++.|+++.++|+-....+..+++.+|+... ..+.|.+++.. .. ..+ -..+.-
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~----~~~i~t~l~~~----~t-----g~~~g~~c~g 161 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR----VNLIASQMQRR----YG-----GWVLTLRCLG 161 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc----CceEEEEEEEE----Ec-----cEECCccCCC
Confidence 4589999999 578889999999999999999999999996210 11223222110 00 001 123667
Q ss_pred hhHHHHHHHH-hhCCCEEEEEcCCcCChhhhhcCCeeEEecC
Q 002151 571 EHKFEIVKRL-QARKHIVGMTGDGVNDAPALKVADIGIAVAD 611 (959)
Q Consensus 571 e~K~~iV~~L-q~~g~~V~m~GDGvNDapALk~AdVGIamg~ 611 (959)
++|.+-++.. .......-+=||..||.|+|+.|+-+++++.
T Consensus 162 ~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 162 HEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred hHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 8998877754 3334455678999999999999999999973
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0091 Score=64.78 Aligned_cols=94 Identities=15% Similarity=0.059 Sum_probs=66.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
+|.||+.+.++.|++.|+++.++||.....+..+-+++|+..-. ...++.+++.. ...-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f-~d~ii~~~~~~----------------~~KP~p~- 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR-PDYNVTTDDVP----------------AGRPAPW- 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC-CceEEccccCC----------------CCCCCHH-
Confidence 46799999999999999999999999999999888888885321 12223222110 1112233
Q ss_pred HHHHHHHHhhCC----CEEEEEcCCcCChhhhhcCCee
Q 002151 573 KFEIVKRLQARK----HIVGMTGDGVNDAPALKVADIG 606 (959)
Q Consensus 573 K~~iV~~Lq~~g----~~V~m~GDGvNDapALk~AdVG 606 (959)
-+.+.+++.| +.+.|+||..+|..|-++|++-
T Consensus 161 --~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 --MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred --HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 2334444433 4599999999999999999964
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0099 Score=65.10 Aligned_cols=122 Identities=11% Similarity=0.074 Sum_probs=78.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++-||+.++++.|++.|+++.++||.....+..+-+..|+..- ....++.+++. ....|.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~-~~d~i~~~~~~------------------~~~KP~- 160 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGY-RPDHVVTTDDV------------------PAGRPY- 160 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCC-CceEEEcCCcC------------------CCCCCC-
Confidence 5679999999999999999999999999888777777776421 11222222111 111221
Q ss_pred HHHHHHHHhhCC----CEEEEEcCCcCChhhhhcCCe---eEEecCc-------------------------hHHHHhhc
Q 002151 573 KFEIVKRLQARK----HIVGMTGDGVNDAPALKVADI---GIAVADS-------------------------TDAARSAS 620 (959)
Q Consensus 573 K~~iV~~Lq~~g----~~V~m~GDGvNDapALk~AdV---GIamg~g-------------------------td~Ak~aA 620 (959)
..-+.+.+++.| ..+.|+||..+|..|-++|++ |+.-|.+ .+....-+
T Consensus 161 p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 240 (267)
T PRK13478 161 PWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGA 240 (267)
T ss_pred hHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCC
Confidence 122334444433 469999999999999999996 4433422 12333457
Q ss_pred cccccCCCchHHHHHH
Q 002151 621 DIVLTEPGLSVIISAV 636 (959)
Q Consensus 621 DivL~~~~~~~I~~ai 636 (959)
|+++ +++..+...+
T Consensus 241 ~~vi--~~~~~l~~~l 254 (267)
T PRK13478 241 HYVI--DTIADLPAVI 254 (267)
T ss_pred Ceeh--hhHHHHHHHH
Confidence 8888 6677666555
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.007 Score=66.04 Aligned_cols=120 Identities=18% Similarity=0.086 Sum_probs=79.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+.. +-..++.+++.. ...-.|+-
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~--~Fd~ii~~~d~~----------------~~KP~Pe~ 170 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG--FFSVVLAAEDVY----------------RGKPDPEM 170 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh--hCcEEEecccCC----------------CCCCCHHH
Confidence 568999999999999999999999999999999989999853 122333332211 11122222
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeE-Ee-cCchHHHHhhccccccCCCchHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGI-AV-ADSTDAARSASDIVLTEPGLSVI 632 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGI-am-g~gtd~Ak~aADivL~~~~~~~I 632 (959)
=....+.+.-....+.|+||..+|..|-++|++-. ++ |.........+|+++ ++++.+
T Consensus 171 ~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el 230 (260)
T PLN03243 171 FMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDL 230 (260)
T ss_pred HHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHH
Confidence 22333444434456999999999999999999843 33 322222233578777 445544
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.012 Score=64.15 Aligned_cols=42 Identities=7% Similarity=0.002 Sum_probs=37.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCC
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGT 534 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 534 (959)
..-+.+.++|++|++.||.+++.||-.......+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 455679999999999999999999999999999999999853
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.014 Score=64.15 Aligned_cols=121 Identities=15% Similarity=0.093 Sum_probs=80.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.||+.++++.|++.|+++.++|+.....+..+-+.+|+.... ..++.+++. . ..|+-
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F--~~vi~~~~~-----------------~--~k~~~ 200 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF--SVVQAGTPI-----------------L--SKRRA 200 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe--EEEEecCCC-----------------C--CCHHH
Confidence 57799999999999999999999999999999999999985321 112222110 0 01211
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE-ecCc--hH--HHHhhccccccCCCchHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIA-VADS--TD--AARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIa-mg~g--td--~Ak~aADivL~~~~~~~I~~ai 636 (959)
=..+++.+.-....++|+||+.+|..|-++|++-.. +..| +. .....+|+++ +++..+...+
T Consensus 201 ~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 201 LSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 112222232234569999999999999999998643 2222 22 3334689988 6688777654
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0038 Score=65.03 Aligned_cols=94 Identities=17% Similarity=0.059 Sum_probs=68.4
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecCh
Q 002151 491 FDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFP 570 (959)
Q Consensus 491 ~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~P 570 (959)
.+++.++++++++.|++.|+++.++||-....+..+-+.+|+..- -..++.+++ +..+-.|
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~--f~~~~~~~~-----------------~~~KP~p 164 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEIL--FPVQIWMED-----------------CPPKPNP 164 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhh--CCEEEeecC-----------------CCCCcCH
Confidence 455777889999999999999999999999999999999998521 122222211 1224445
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcC
Q 002151 571 EHKFEIVKRLQARKHIVGMTGDGVNDAPALKVA 603 (959)
Q Consensus 571 e~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~A 603 (959)
+--..+.+.+.-....|.|+||+.+|+.|-++|
T Consensus 165 ~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 165 EPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 554555666655566799999999999887654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.013 Score=70.70 Aligned_cols=40 Identities=10% Similarity=0.150 Sum_probs=36.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCC
Q 002151 494 PRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMG 533 (959)
Q Consensus 494 lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 533 (959)
.-+.+.++|++++++||.+++.||....-...+.+++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3357899999999999999999999999999999999974
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.013 Score=62.00 Aligned_cols=113 Identities=14% Similarity=0.140 Sum_probs=71.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.||+.+.++.|++.|+++.++|+.....+...-+..|+.. ...++.+++.. ...-.|+-
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~---~~~i~~~~~~~----------------~~KP~p~~ 143 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA---PEVFVTAERVK----------------RGKPEPDA 143 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC---ccEEEEHHHhc----------------CCCCCcHH
Confidence 578999999999999999999999988776666656677631 11222221100 11112222
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEecCch-HHHHhhccccc
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG-IAVADST-DAARSASDIVL 624 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~gt-d~Ak~aADivL 624 (959)
=....+.+.-....+.|+||..+|+.|-++|++- |++..+. ......+|+++
T Consensus 144 ~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~ 197 (218)
T PRK11587 144 YLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVL 197 (218)
T ss_pred HHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEe
Confidence 2233333333346799999999999999999984 5554332 22334577776
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.019 Score=62.20 Aligned_cols=116 Identities=13% Similarity=0.136 Sum_probs=78.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.||+.++++.|++.|+++.++|+-....+..+-+++|+..- -..++.+++.. ...-.|+-
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~iv~~~~~~----------------~~KP~p~~ 169 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDF--FQAVIIGSECE----------------HAKPHPDP 169 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhh--CcEEEecCcCC----------------CCCCChHH
Confidence 5788999999999999999999999999999999999998531 22333333211 11223333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE-ecCch---HHHHhhccccccC
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIA-VADST---DAARSASDIVLTE 626 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIa-mg~gt---d~Ak~aADivL~~ 626 (959)
=....+.+.-....+.|+||..+|..|=++|++-.. +..|. +.....+|+++.+
T Consensus 170 ~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 170 YLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 344445554444669999999999999999987532 32221 2223468888733
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0056 Score=71.23 Aligned_cols=49 Identities=22% Similarity=0.211 Sum_probs=41.1
Q ss_pred hHHHHHHHHhhC----C---CEEEEEcCCcCChhhhhcCC-eeEEecCchHHHHhhc
Q 002151 572 HKFEIVKRLQAR----K---HIVGMTGDGVNDAPALKVAD-IGIAVADSTDAARSAS 620 (959)
Q Consensus 572 ~K~~iV~~Lq~~----g---~~V~m~GDGvNDapALk~Ad-VGIamg~gtd~Ak~aA 620 (959)
.|..-++.|.++ | ..|..+||+.||.+||+.|+ .||+|+++.+..|+.+
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a 231 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWY 231 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHH
Confidence 587777777654 2 37899999999999999999 6999999999888754
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.0076 Score=64.51 Aligned_cols=89 Identities=21% Similarity=0.233 Sum_probs=63.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC----CcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeec
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGD----QLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGV 568 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~ 568 (959)
.|.+++++.++.+++.|+++.++||. ...++..+.+..|++...+...++.|+..
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 47788999999999999999999995 36689999998999532222222222210
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee
Q 002151 569 FPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG 606 (959)
Q Consensus 569 ~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG 606 (959)
.-++|.. .+++.| .+.|+||..+|..|-++|++-
T Consensus 173 ~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 173 GQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 1134444 344554 589999999999999998874
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.013 Score=69.50 Aligned_cols=123 Identities=12% Similarity=0.077 Sum_probs=82.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
+|.||+.+.++.|++.|+++.++|+-....+..+-+.+|+..- -..++.+++.. ..-.|+-
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~--f~~i~~~d~v~-----------------~~~kP~~ 390 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQW--VTETFSIEQIN-----------------SLNKSDL 390 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhh--cceeEecCCCC-----------------CCCCcHH
Confidence 6889999999999999999999999999999999999998531 12233332111 1112321
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEecC--chHHHHhhccccccCCCchHHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADI-GIAVAD--STDAARSASDIVLTEPGLSVIISAVLT 638 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdV-GIamg~--gtd~Ak~aADivL~~~~~~~I~~ai~~ 638 (959)
=....+.++ -..+.|+||..+|..|-++|++ .|++.. +.+.....+|+++ ++++.+...+..
T Consensus 391 ~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 391 VKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 112222222 2469999999999999999997 444432 2222234588888 667777776644
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.015 Score=61.39 Aligned_cols=97 Identities=18% Similarity=0.116 Sum_probs=66.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.||+.++++.|++.|+++.++|+-+...+...-+++|+..- -..++.+++ ..+..|..
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~--f~~i~~~~~------------------~~~~KP~~ 153 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDF--FDAVITSEE------------------EGVEKPHP 153 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHh--ccEEEEecc------------------CCCCCCCH
Confidence 5789999999999999999999999888777878888887421 112222221 11222322
Q ss_pred HHHHHHHHhhC---CCEEEEEcCCc-CChhhhhcCCe-eEEec
Q 002151 573 KFEIVKRLQAR---KHIVGMTGDGV-NDAPALKVADI-GIAVA 610 (959)
Q Consensus 573 K~~iV~~Lq~~---g~~V~m~GDGv-NDapALk~AdV-GIamg 610 (959)
. -+-+.+++. ...+.|+||.. +|..+-++|++ .|.+.
T Consensus 154 ~-~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 154 K-IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred H-HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 1 222333433 35699999998 99999999987 44454
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.017 Score=60.33 Aligned_cols=39 Identities=31% Similarity=0.370 Sum_probs=35.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhC
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLG 531 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lG 531 (959)
++.+++.+++++|++.|+++.++||.....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467899999999999999999999999999999888754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.0099 Score=63.70 Aligned_cols=89 Identities=20% Similarity=0.199 Sum_probs=62.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC----CcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeec
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGD----QLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGV 568 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~ 568 (959)
.|.+++++.++.+++.|+++.++|+- ...++..+.+.+|+... ...++.++... .-
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~--f~~i~~~d~~~------------------~~ 173 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM--NPVIFAGDKPG------------------QY 173 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh--eeEEECCCCCC------------------CC
Confidence 35556999999999999999999997 66799999999999531 12222222110 01
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee
Q 002151 569 FPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG 606 (959)
Q Consensus 569 ~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG 606 (959)
.| +|. ..+++.| ++.|+||..||..|-++|++-
T Consensus 174 Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 174 QY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 12 232 2445555 578999999999999888764
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.016 Score=64.51 Aligned_cols=108 Identities=14% Similarity=0.064 Sum_probs=76.7
Q ss_pred cCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecC
Q 002151 490 LFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVF 569 (959)
Q Consensus 490 l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~ 569 (959)
..+++.+++.++++.|++.|+++.++||.....+..+.+.+|+....+ ..+.|.+. ....+.. ..--+-.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f--~~i~~~~~-------~~~~~~~-~~~~kp~ 253 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF--DDLIGRPP-------DMHFQRE-QGDKRPD 253 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch--hhhhCCcc-------hhhhccc-CCCCCCc
Confidence 568999999999999999999999999999999999999998853111 11122110 0000000 0012445
Q ss_pred hhhHHHHHHHHhh-CCCEEEEEcCCcCChhhhhcCCeeE
Q 002151 570 PEHKFEIVKRLQA-RKHIVGMTGDGVNDAPALKVADIGI 607 (959)
Q Consensus 570 Pe~K~~iV~~Lq~-~g~~V~m~GDGvNDapALk~AdVGI 607 (959)
|+-+....+.+-. .-..+.|+||..||+.+-++|++-.
T Consensus 254 p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 254 DVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 7777777776543 3368999999999999999999874
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.034 Score=69.81 Aligned_cols=162 Identities=17% Similarity=0.150 Sum_probs=95.6
Q ss_pred HHHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEee--cCCCCCcchHHHHHHHHh-CCCeEEEEcCCCcHHHHH
Q 002151 449 HSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLP--LFDPPRHDSAETIRRALD-LGVSVKMITGDQLAIGKE 525 (959)
Q Consensus 449 ~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~--l~D~lr~~v~eaI~~l~~-aGI~v~miTGD~~~tA~~ 525 (959)
....+.|.+.-.|.+++-+.. |++.... -...+-+++.+++++|.+ .|+.|+++||........
T Consensus 481 ~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~ 547 (726)
T PRK14501 481 EEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLER 547 (726)
T ss_pred HHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHH
Confidence 344555666667888877654 3333211 012366899999999999 699999999999988877
Q ss_pred HHHHhCCCCCCCCCcccc--Cccccc----------------------------------------cCCcc--------h
Q 002151 526 TGRRLGMGTNMYPSSALL--GEKKDT----------------------------------------IVGLP--------V 555 (959)
Q Consensus 526 ia~~lGi~~~~~~~~~l~--g~~~~~----------------------------------------~~~~~--------~ 555 (959)
....+++.--......+. |.+... ..+.+ +
T Consensus 548 ~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l 627 (726)
T PRK14501 548 WFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANEL 627 (726)
T ss_pred HhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHH
Confidence 655444310000000000 000000 00000 1
Q ss_pred HHHHhh----cC-------ceeecCh--hhHHHHHHHHhhC--CCEEEEEcCCcCChhhhhcC---CeeEEecCchHHHH
Q 002151 556 DDLIEK----AD-------GFAGVFP--EHKFEIVKRLQAR--KHIVGMTGDGVNDAPALKVA---DIGIAVADSTDAAR 617 (959)
Q Consensus 556 ~~~i~~----~~-------vfar~~P--e~K~~iV~~Lq~~--g~~V~m~GDGvNDapALk~A---dVGIamg~gtd~Ak 617 (959)
.+.+.. .. -+-.+.| -+|...++.+.+. -..|+++||+.||.+|++.+ ..+|+||++ +
T Consensus 628 ~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~ 703 (726)
T PRK14501 628 ILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----E 703 (726)
T ss_pred HHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----C
Confidence 111111 00 1112334 4788888888764 24799999999999999987 588888864 4
Q ss_pred hhccccccCC
Q 002151 618 SASDIVLTEP 627 (959)
Q Consensus 618 ~aADivL~~~ 627 (959)
.+|++.|.++
T Consensus 704 s~A~~~l~~~ 713 (726)
T PRK14501 704 SRARYRLPSQ 713 (726)
T ss_pred CcceEeCCCH
Confidence 5788888643
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.028 Score=57.39 Aligned_cols=123 Identities=9% Similarity=-0.008 Sum_probs=69.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCcH--------HHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCce
Q 002151 494 PRHDSAETIRRALDLGVSVKMITGDQLA--------IGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGF 565 (959)
Q Consensus 494 lr~~v~eaI~~l~~aGI~v~miTGD~~~--------tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vf 565 (959)
+.||+++++++|++.|+++.++|+.... .....-+..|+..- +.+....+++. -.
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~~----------------~~ 91 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI-YLCPHKHGDGC----------------EC 91 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE-EECcCCCCCCC----------------CC
Confidence 6799999999999999999999987531 12222334555310 00000000000 01
Q ss_pred eecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE-ecC--chH--------HHHhhccccccCCCchHHHH
Q 002151 566 AGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIA-VAD--STD--------AARSASDIVLTEPGLSVIIS 634 (959)
Q Consensus 566 ar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIa-mg~--gtd--------~Ak~aADivL~~~~~~~I~~ 634 (959)
.+-.|+-=.++.+.+.-.-+.+.|+||..+|..|=++|++-.. +.. +.+ .....+|+++ +++..+..
T Consensus 92 ~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~--~~~~el~~ 169 (173)
T PRK06769 92 RKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIA--ENFEDAVN 169 (173)
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchh--hCHHHHHH
Confidence 1222332234444444334569999999999999999987544 332 232 1123467776 44665554
Q ss_pred H
Q 002151 635 A 635 (959)
Q Consensus 635 a 635 (959)
.
T Consensus 170 ~ 170 (173)
T PRK06769 170 W 170 (173)
T ss_pred H
Confidence 3
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.021 Score=57.16 Aligned_cols=110 Identities=12% Similarity=0.040 Sum_probs=67.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
.++|+-++.++.+++.+|+++++|+--.-....+=..++=-...+...+...+. .+.......++-. .-...--+
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~--~ih~dg~h~i~~~---~ds~fG~d 147 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNND--YIHIDGQHSIKYT---DDSQFGHD 147 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCc--eEcCCCceeeecC---CccccCCC
Confidence 478999999999999999999999877665555555444111111111111100 0000000000000 01222358
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeE
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGI 607 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGI 607 (959)
|...|+.|++..+.+-|+|||+-|..|-|.+|+=.
T Consensus 148 K~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllF 182 (220)
T COG4359 148 KSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLF 182 (220)
T ss_pred cchhHHHhhcCCceEEEecCCcccccHhhhhhhHh
Confidence 99999999999999999999999998866655543
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.047 Score=56.06 Aligned_cols=128 Identities=20% Similarity=0.095 Sum_probs=71.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcH---------------HHHHHHHHhCCCCCCCCCccccCccccccCCcchHH
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLA---------------IGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDD 557 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~---------------tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 557 (959)
.+.||+.+++++|++.|+++.++|..... ....+-++.|+.- ..++...... ..+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f----~~i~~~~~~~---~~~--- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRL----DGIYYCPHHP---EDG--- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCcc----ceEEECCCCC---CCC---
Confidence 36799999999999999999999987631 1112223344420 0111100000 000
Q ss_pred HHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeE-EecCchH---HHHhhc--cccccCCCchH
Q 002151 558 LIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGI-AVADSTD---AARSAS--DIVLTEPGLSV 631 (959)
Q Consensus 558 ~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGI-amg~gtd---~Ak~aA--DivL~~~~~~~ 631 (959)
.....-.|+-=....+.+.-..+.+.|+||..+|..+-++|++-. .+..|.. .....+ |.++ +++..
T Consensus 99 -----~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~e 171 (181)
T PRK08942 99 -----CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLAD 171 (181)
T ss_pred -----CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHHH
Confidence 001122344334444555444567999999999999999999742 2223321 112234 7777 55776
Q ss_pred HHHHHH
Q 002151 632 IISAVL 637 (959)
Q Consensus 632 I~~ai~ 637 (959)
+...+.
T Consensus 172 l~~~l~ 177 (181)
T PRK08942 172 LPQALK 177 (181)
T ss_pred HHHHHH
Confidence 666543
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.032 Score=58.02 Aligned_cols=94 Identities=15% Similarity=0.146 Sum_probs=64.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.||+.+++++|++.|+++.++|+-+......+.+++|+... -..++.+++. ....|..
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~--fd~i~~s~~~------------------~~~KP~~ 151 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDP--FDAVLSADAV------------------RAYKPAP 151 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhh--hheeEehhhc------------------CCCCCCH
Confidence 5789999999999999999999999888888888888997421 1122222111 1112321
Q ss_pred H--HHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee
Q 002151 573 K--FEIVKRLQARKHIVGMTGDGVNDAPALKVADIG 606 (959)
Q Consensus 573 K--~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG 606 (959)
. ..+.+.+.-.-..+.|+||+.+|+.+-++|++-
T Consensus 152 ~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 152 QVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 1 223333333345689999999999998888764
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.032 Score=61.75 Aligned_cols=121 Identities=18% Similarity=0.100 Sum_probs=72.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCC-ccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPS-SALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~-~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
++.||+.+.++.|++.|+++.++|+-+......+-+..+... .... .++.+++. ....-.|+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~-~~~~~~~v~~~~~----------------~~~KP~p~ 206 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPE-RAQGLDVFAGDDV----------------PKKKPDPD 206 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccc-ccCceEEEecccc----------------CCCCCCHH
Confidence 578999999999999999999999988777666555443211 0000 11111110 01122222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEec-Cch--HHHHhhccccccCCCchHH
Q 002151 572 HKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVA-DST--DAARSASDIVLTEPGLSVI 632 (959)
Q Consensus 572 ~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~gt--d~Ak~aADivL~~~~~~~I 632 (959)
-=..+.+.+.-....+.|+||+.+|..|-++|++....- .|. .-....+|+++ +++..+
T Consensus 207 ~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi--~~~~~l 268 (286)
T PLN02779 207 IYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF--DCLGDV 268 (286)
T ss_pred HHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE--CChhhc
Confidence 223334444434456999999999999999999765432 322 11123578877 445443
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.092 Score=54.21 Aligned_cols=144 Identities=20% Similarity=0.241 Sum_probs=94.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccC------cc--------ccccCCcchHHH
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG------EK--------KDTIVGLPVDDL 558 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g------~~--------~~~~~~~~~~~~ 558 (959)
.+-||+.++.+.+++. ...+++|---..-+.++|..+|++........+.= ++ ++..+..+-+++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 3568999999998864 35566677777888999999999543221111100 00 000111122223
Q ss_pred HhhcC-ceeecChhhHHHHHHHHh---------------hC---CCEEEEEcCCcCChhhhhcCC--eeEEec-CchHHH
Q 002151 559 IEKAD-GFAGVFPEHKFEIVKRLQ---------------AR---KHIVGMTGDGVNDAPALKVAD--IGIAVA-DSTDAA 616 (959)
Q Consensus 559 i~~~~-vfar~~Pe~K~~iV~~Lq---------------~~---g~~V~m~GDGvNDapALk~Ad--VGIamg-~gtd~A 616 (959)
.++.+ +|.|+.|..-.+|++..+ +. ....+.+||.+.|..||+.+. =|+|+. +|.+-|
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYa 241 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYA 241 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCccc
Confidence 33332 688888865444444433 22 345678999999999999885 248887 888888
Q ss_pred HhhccccccCCCchHHHHHHH
Q 002151 617 RSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 617 k~aADivL~~~~~~~I~~ai~ 637 (959)
..-||+.+..++.+.....|.
T Consensus 242 l~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 242 LKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccceEEeccchhhhhHHHH
Confidence 889999999999888877775
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.025 Score=57.80 Aligned_cols=91 Identities=8% Similarity=-0.038 Sum_probs=58.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.||+.++++.|+++|+++.++|+... +...-+++|+... -..++.+.+. .+..|.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~--f~~~~~~~~~------------------~~~kp~- 143 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDY--FDAIVDPAEI------------------KKGKPD- 143 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhh--CcEEEehhhc------------------CCCCCC-
Confidence 5789999999999999999999997533 3456677787421 1122222111 111232
Q ss_pred HHHHHHHHhhC---CCEEEEEcCCcCChhhhhcCCee
Q 002151 573 KFEIVKRLQAR---KHIVGMTGDGVNDAPALKVADIG 606 (959)
Q Consensus 573 K~~iV~~Lq~~---g~~V~m~GDGvNDapALk~AdVG 606 (959)
..-+-+.+++. ...+.|+||..+|+.|-++|++-
T Consensus 144 p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 144 PEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 11222333333 34589999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.04 Score=58.69 Aligned_cols=99 Identities=10% Similarity=-0.043 Sum_probs=65.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecCh--
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFP-- 570 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~P-- 570 (959)
++.||+.+.++.|++.|+++.++|+-+...+...-+..|+..- -..++.+++. .+-.|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~--fd~iv~s~~~------------------~~~KP~p 152 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAH--LDLLLSTHTF------------------GYPKEDQ 152 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHH--CCEEEEeeeC------------------CCCCCCH
Confidence 6789999999999999999999999888888777777887421 1122222111 11122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee--EEecC
Q 002151 571 EHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG--IAVAD 611 (959)
Q Consensus 571 e~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG--Iamg~ 611 (959)
+-=....+.+.-....+.|+||..+|+.+-++|++. +++.+
T Consensus 153 ~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 153 RLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 211122233332345699999999999999999995 44543
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.016 Score=58.09 Aligned_cols=97 Identities=18% Similarity=0.192 Sum_probs=68.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
.++.|++.+.++.|++.|++++++|+-.........+++|+.. +...++.+.+.. ...-.|+
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~--~f~~i~~~~~~~----------------~~Kp~~~ 137 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDD--YFDEIISSDDVG----------------SRKPDPD 137 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGG--GCSEEEEGGGSS----------------SSTTSHH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCccccccccccccccc--ccccccccchhh----------------hhhhHHH
Confidence 3688999999999999999999999999999999999999852 122333222111 1111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee
Q 002151 572 HKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG 606 (959)
Q Consensus 572 ~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG 606 (959)
-=..+.+.+.-..+.+.|+||..+|..+-++|++-
T Consensus 138 ~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 138 AYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 22344455544556799999999999998888764
|
... |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.043 Score=57.98 Aligned_cols=119 Identities=13% Similarity=0.076 Sum_probs=74.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.+++|++. +++.++|+-....+..+-+++|+..- -..++.+.+. ....|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~--fd~i~~~~~~------------------~~~KP~~ 155 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPF--FDDIFVSEDA------------------GIQKPDK 155 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhh--cCEEEEcCcc------------------CCCCCCH
Confidence 5789999999999999 99999999988888888888888531 1122221111 0112322
Q ss_pred H--HHHHHHH-hhCCCEEEEEcCCc-CChhhhhcCCe-eEEec--CchHHHHhhccccccCCCchHHHH
Q 002151 573 K--FEIVKRL-QARKHIVGMTGDGV-NDAPALKVADI-GIAVA--DSTDAARSASDIVLTEPGLSVIIS 634 (959)
Q Consensus 573 K--~~iV~~L-q~~g~~V~m~GDGv-NDapALk~AdV-GIamg--~gtd~Ak~aADivL~~~~~~~I~~ 634 (959)
. ....+.+ .-....+.|+||.. +|..+=+++++ +|.+. ..+......+|.++ ++++.+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 156 EIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 1 2233333 22234699999998 89999999996 33332 22212223456666 45655544
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.066 Score=61.18 Aligned_cols=120 Identities=15% Similarity=0.108 Sum_probs=79.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+||.. +-..++.+++.. ...-.|+-
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~--yFd~Iv~sddv~----------------~~KP~Pei 277 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG--FFSVIVAAEDVY----------------RGKPDPEM 277 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH--HceEEEecCcCC----------------CCCCCHHH
Confidence 477999999999999999999999999999999999999853 112233222110 01112222
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE-ecCchHHHH-hhccccccCCCchHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIA-VADSTDAAR-SASDIVLTEPGLSVI 632 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIa-mg~gtd~Ak-~aADivL~~~~~~~I 632 (959)
=....+.+.-....+.|+||..+|+.|-+.|++-.. +..+.+... ..+|+++ +++..+
T Consensus 278 fl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 278 FIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 233444444445679999999999999999998533 233322222 3478877 556544
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.067 Score=54.41 Aligned_cols=94 Identities=14% Similarity=0.110 Sum_probs=62.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+... -..++.+++. ....-.|+-
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~--f~~i~~~~~~----------------~~~KP~~~~ 145 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL--FDVVIFSGDV----------------GRGKPDPDI 145 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH--CCEEEEcCCC----------------CCCCCCHHH
Confidence 678999999999999999999999988776 555555887421 1222222111 011222333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADI 605 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdV 605 (959)
=..+.+.+.-....+.|+||...|+.+-++|++
T Consensus 146 ~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 146 YLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 333444444345679999999999998888876
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.046 Score=55.92 Aligned_cols=92 Identities=11% Similarity=0.076 Sum_probs=59.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.||+.++++.|++.|+++.++|+- ..+..+-+.+|+..- -..++.+.+ ..+..|..
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~--f~~v~~~~~------------------~~~~kp~~ 145 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDY--FDAIVDADE------------------VKEGKPHP 145 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHH--CCEeeehhh------------------CCCCCCCh
Confidence 68999999999999999999999986 556677777887421 111221111 01122321
Q ss_pred H--HHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee
Q 002151 573 K--FEIVKRLQARKHIVGMTGDGVNDAPALKVADIG 606 (959)
Q Consensus 573 K--~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG 606 (959)
. ....+.+.-..+.+.|+||..+|..+-++|++.
T Consensus 146 ~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 146 ETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 1 122222222235688999999999999988774
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.088 Score=55.77 Aligned_cols=120 Identities=17% Similarity=0.105 Sum_probs=74.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.||+.++++.|+ .|+++.++|......+...-+++|+..- -..++.+++. ....|..
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~--fd~v~~~~~~------------------~~~KP~p 153 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDY--FDLLVISEQV------------------GVAKPDV 153 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHH--cCEEEEECcc------------------CCCCCCH
Confidence 47899999999999 6899999999888888877778887421 1122222111 0112321
Q ss_pred HHHHHHHHhhCC----CEEEEEcCCc-CChhhhhcCCee-EEec-CchH-HHHhhccccccCCCchHHHHHH
Q 002151 573 KFEIVKRLQARK----HIVGMTGDGV-NDAPALKVADIG-IAVA-DSTD-AARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 573 K~~iV~~Lq~~g----~~V~m~GDGv-NDapALk~AdVG-Iamg-~gtd-~Ak~aADivL~~~~~~~I~~ai 636 (959)
.-+-..+++.| ..+.|+||.. +|+.+=++|++- |.+. .+.. .....+|+++ ++++.+...+
T Consensus 154 -~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 154 -AIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred -HHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 12222333332 4699999998 799999999985 4443 2221 1112467777 5566665543
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.033 Score=60.27 Aligned_cols=54 Identities=22% Similarity=0.285 Sum_probs=47.4
Q ss_pred hhHHHHHHHHhhCCCEEEEEcC----CcCChhhhhcC-CeeEEecCchHHHHhhccccc
Q 002151 571 EHKFEIVKRLQARKHIVGMTGD----GVNDAPALKVA-DIGIAVADSTDAARSASDIVL 624 (959)
Q Consensus 571 e~K~~iV~~Lq~~g~~V~m~GD----GvNDapALk~A-dVGIamg~gtd~Ak~aADivL 624 (959)
-+|..-++.|.++-+-|+++|| |-||.+||+.| -.|++++++++..|..+.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 4799999999877788999999 99999999987 688999999999998887654
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.091 Score=50.75 Aligned_cols=91 Identities=16% Similarity=0.134 Sum_probs=61.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC--------cHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCc
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQ--------LAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADG 564 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~--------~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~v 564 (959)
++.|++.++++.|+++|+++.++|+.. ......+.+++|+.... ....+ .
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-------------------~ 82 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-------------------H 82 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC-------------------C
Confidence 678999999999999999999999988 67777788888874210 01100 0
Q ss_pred eeecChhhHHHHHHHHh-hCCCEEEEEcC-CcCChhhhhcCCe
Q 002151 565 FAGVFPEHKFEIVKRLQ-ARKHIVGMTGD-GVNDAPALKVADI 605 (959)
Q Consensus 565 far~~Pe~K~~iV~~Lq-~~g~~V~m~GD-GvNDapALk~AdV 605 (959)
+.+-.|+-=..+.+.++ -....+.|+|| -.+|..+-++|++
T Consensus 83 ~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 83 CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 01111222223344442 33467999999 5899999888875
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.079 Score=61.17 Aligned_cols=114 Identities=18% Similarity=0.119 Sum_probs=70.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHH-HhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGR-RLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~-~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
++.||+.+.++.|++.|+++.++|+-....+...-+ ..|+... -..++.+++. ....-.|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~--Fd~ii~~d~v----------------~~~KP~p~ 154 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES--FSVIVGGDEV----------------EKGKPSPD 154 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh--CCEEEehhhc----------------CCCCCCHH
Confidence 467999999999999999999999998887766554 5676321 1122222110 01111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE-ecCc--hHHHHhhccccc
Q 002151 572 HKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIA-VADS--TDAARSASDIVL 624 (959)
Q Consensus 572 ~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIa-mg~g--td~Ak~aADivL 624 (959)
-=.++.+.+.-..+.|.|+||..+|..|-++|++... +..+ .......+|.++
T Consensus 155 ~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 155 IFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred HHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 2223333343335679999999999999999998633 3332 222333456555
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.23 Score=56.77 Aligned_cols=67 Identities=24% Similarity=0.211 Sum_probs=47.7
Q ss_pred eecChh---hHHHHHHHHhhC-C-----C-EEEEEcCCcCChhhhhc-----CCeeEEecCchHHHHhhccccccCCCch
Q 002151 566 AGVFPE---HKFEIVKRLQAR-K-----H-IVGMTGDGVNDAPALKV-----ADIGIAVADSTDAARSASDIVLTEPGLS 630 (959)
Q Consensus 566 ar~~Pe---~K~~iV~~Lq~~-g-----~-~V~m~GDGvNDapALk~-----AdVGIamg~gtd~Ak~aADivL~~~~~~ 630 (959)
-.+.|. +|..-|+.+.+. | . .+.++||+.||-.|++. +++||+||+|.... .|++.| ++-.
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L--~dp~ 367 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSL--RDPS 367 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEc--CCHH
Confidence 355664 888888887654 2 1 25899999999999996 68999998765433 678888 4455
Q ss_pred HHHHHH
Q 002151 631 VIISAV 636 (959)
Q Consensus 631 ~I~~ai 636 (959)
.+...+
T Consensus 368 eV~~~L 373 (384)
T PLN02580 368 EVMEFL 373 (384)
T ss_pred HHHHHH
Confidence 555444
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.22 Score=50.02 Aligned_cols=102 Identities=13% Similarity=0.186 Sum_probs=65.9
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHH---HHHHHh---C--CCCCCCCCccccCccccccCCcchHHHHhhc
Q 002151 491 FDPPRHDSAETIRRALDLGVSVKMITGDQLAIGK---ETGRRL---G--MGTNMYPSSALLGEKKDTIVGLPVDDLIEKA 562 (959)
Q Consensus 491 ~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~---~ia~~l---G--i~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~ 562 (959)
+|...++++++++++++.|+++..+||.....+. ....++ | ++. ..++... .. .... ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~-g~-----~~~~-~~~- 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSP-DR-----LFAA-LHR- 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcC-Cc-----chhh-hhc-
Confidence 4678899999999999999999999999987764 444442 2 321 1111110 00 0000 000
Q ss_pred CceeecCh-hhHHHHHHHHhh-----CCCEEEEEcCCcCChhhhhcCCe
Q 002151 563 DGFAGVFP-EHKFEIVKRLQA-----RKHIVGMTGDGVNDAPALKVADI 605 (959)
Q Consensus 563 ~vfar~~P-e~K~~iV~~Lq~-----~g~~V~m~GDGvNDapALk~AdV 605 (959)
.+. .-.| +.|.+.++.+++ ....++..||+.+|+.+-++++|
T Consensus 93 e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 93 EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 122 2234 348888888877 35678889999999999887765
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.11 Score=53.14 Aligned_cols=108 Identities=7% Similarity=-0.058 Sum_probs=67.5
Q ss_pred EeecCCCCCcchHHHHHHHHhCCCeEEEEcCC-CcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCce
Q 002151 487 LLPLFDPPRHDSAETIRRALDLGVSVKMITGD-QLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGF 565 (959)
Q Consensus 487 li~l~D~lr~~v~eaI~~l~~aGI~v~miTGD-~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vf 565 (959)
...-.-++.||+.+.++.|+++|+++.++|+- ....+..+-..+|+..... ...+.+.++ .-+.
T Consensus 39 ~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~--------------~~~~~~~Fd-~iv~ 103 (174)
T TIGR01685 39 KSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK--------------TVPMHSLFD-DRIE 103 (174)
T ss_pred CCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC--------------cccHHHhce-eeee
Confidence 33344568899999999999999999999965 8888888888888741000 000000000 0011
Q ss_pred eecChhhH--HHHHHHHhhC------CCEEEEEcCCcCChhhhhcCCeeEEe
Q 002151 566 AGVFPEHK--FEIVKRLQAR------KHIVGMTGDGVNDAPALKVADIGIAV 609 (959)
Q Consensus 566 ar~~Pe~K--~~iV~~Lq~~------g~~V~m~GDGvNDapALk~AdVGIam 609 (959)
+.-.+..| .++.+.+.+. -..+.|+||...|+.|-++|++-...
T Consensus 104 ~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 104 IYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred ccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 11111111 2344544432 25699999999999999999886654
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=93.78 E-value=0.22 Score=50.66 Aligned_cols=107 Identities=12% Similarity=0.151 Sum_probs=70.4
Q ss_pred HHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCC-cHHHHHHHHHhCCC
Q 002151 455 FAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQ-LAIGKETGRRLGMG 533 (959)
Q Consensus 455 ~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~-~~tA~~ia~~lGi~ 533 (959)
+.+.|.+.+.+-... ++. ..=...+-|++.++++.|++.|+++.++|+-+ ...+..+.+.+|+.
T Consensus 20 ~~~~~v~~vv~D~Dg-------------tl~--~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-------------TLV--YPDHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred HHHCCCCEEEEecCC-------------ccc--cCCCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 345788888876533 111 00123577999999999999999999999987 57777787888763
Q ss_pred CCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHHhhC---CCEEEEEcCCc-CChhhhhcCCee
Q 002151 534 TNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQAR---KHIVGMTGDGV-NDAPALKVADIG 606 (959)
Q Consensus 534 ~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~---g~~V~m~GDGv-NDapALk~AdVG 606 (959)
.. +....|... -+-..+++. ...+.|+||.. .|..+-++|++-
T Consensus 85 ~~-----------------------------~~~~KP~p~-~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 85 VL-----------------------------PHAVKPPGC-AFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred EE-----------------------------cCCCCCChH-HHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 10 001122211 222233332 34599999998 799999999873
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=93.76 E-value=0.18 Score=51.53 Aligned_cols=125 Identities=13% Similarity=0.048 Sum_probs=65.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCcH---------------HHHHHHHHhCCCCCCCCCccccCccccccCCcchHHH
Q 002151 494 PRHDSAETIRRALDLGVSVKMITGDQLA---------------IGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDL 558 (959)
Q Consensus 494 lr~~v~eaI~~l~~aGI~v~miTGD~~~---------------tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~ 558 (959)
+.|++.+++++|+++|+++.++|.-... ....+-.+.|+.-+ .++...... .....+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~i~~~~~~~-~~~~~~~-- 99 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLD----GIYYCPHHP-EGVEEFR-- 99 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCcc----EEEECCCCC-ccccccc--
Confidence 5789999999999999999999976531 11122223333210 000000000 0000000
Q ss_pred HhhcCceeecChhhHHHHHHHHhhC---CCEEEEEcCCcCChhhhhcCCee--EEecCch---HHHHhhccccccCCCch
Q 002151 559 IEKADGFAGVFPEHKFEIVKRLQAR---KHIVGMTGDGVNDAPALKVADIG--IAVADST---DAARSASDIVLTEPGLS 630 (959)
Q Consensus 559 i~~~~vfar~~Pe~K~~iV~~Lq~~---g~~V~m~GDGvNDapALk~AdVG--Iamg~gt---d~Ak~aADivL~~~~~~ 630 (959)
+-+....|.- .-+...+++. ...+.|+||..+|..|-++|++. |.+..|. ......+|+++ +++.
T Consensus 100 ----~~~~~~KP~p-~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i--~~~~ 172 (176)
T TIGR00213 100 ----QVCDCRKPKP-GMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVL--NSLA 172 (176)
T ss_pred ----CCCCCCCCCH-HHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEe--ccHH
Confidence 0011112321 1223333333 35688999999999999999985 3443332 12223478888 4555
Q ss_pred HH
Q 002151 631 VI 632 (959)
Q Consensus 631 ~I 632 (959)
.+
T Consensus 173 el 174 (176)
T TIGR00213 173 DL 174 (176)
T ss_pred Hh
Confidence 44
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.61 E-value=0.42 Score=47.57 Aligned_cols=109 Identities=13% Similarity=0.163 Sum_probs=76.3
Q ss_pred HHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhC
Q 002151 452 IDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLG 531 (959)
Q Consensus 452 i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lG 531 (959)
.+.+.++|.|.+.+-..+ +++..= ....-|++.+=+++++.+|+++.++|.-+..-+...++.+|
T Consensus 20 ~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~ 84 (175)
T COG2179 20 PDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLG 84 (175)
T ss_pred HHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcC
Confidence 456888999998875543 333221 12345678888899999999999999999999999999999
Q ss_pred CCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHHhhC---CCEEEEEcCCc-CChhhhhcCCe
Q 002151 532 MGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQAR---KHIVGMTGDGV-NDAPALKVADI 605 (959)
Q Consensus 532 i~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~---g~~V~m~GDGv-NDapALk~AdV 605 (959)
+.- ++--..|--+ .+-+++++. -+.|+|+||-. -|+-+=+.|++
T Consensus 85 v~f-----------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 85 VPF-----------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred Cce-----------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 852 1111123322 456666665 45799999986 78877666654
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=93.52 E-value=0.22 Score=52.71 Aligned_cols=100 Identities=14% Similarity=0.118 Sum_probs=57.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHH-HHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKE-TGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~-ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
++.||+.+.|+.|++.|+++.++||-+...... .-+..|+.. +-..++.+++.+ .....-.|+
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~--~f~~i~~~~~~~--------------~~~~KP~p~ 141 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS--LMHHVVTGDDPE--------------VKQGKPAPD 141 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh--hCCEEEECChhh--------------ccCCCCCcH
Confidence 578999999999999999999999977653322 222223321 111222221000 000111222
Q ss_pred hHHHHHHHHh---hCCCEEEEEcCCcCChhhhhcCCeeEE
Q 002151 572 HKFEIVKRLQ---ARKHIVGMTGDGVNDAPALKVADIGIA 608 (959)
Q Consensus 572 ~K~~iV~~Lq---~~g~~V~m~GDGvNDapALk~AdVGIa 608 (959)
==...++.+. -..+-+.|+||...|+.|-++|++-..
T Consensus 142 ~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 142 IFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred HHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 1122333332 223569999999999999999998543
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.19 Score=52.31 Aligned_cols=94 Identities=14% Similarity=0.050 Sum_probs=57.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++-||+.++++.|++.|+++.++|+-... ....-+.+|+... -..++.+.+.. +..-.|+=
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~--fd~i~~s~~~~----------------~~KP~~~~ 165 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEY--FDFVVTSYEVG----------------AEKPDPKI 165 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHh--cceEEeecccC----------------CCCCCHHH
Confidence 57799999999999999999999975543 4566677777321 11122111100 11112211
Q ss_pred HHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCe
Q 002151 573 KFEIVKRLQARKHIVGMTGDGV-NDAPALKVADI 605 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGv-NDapALk~AdV 605 (959)
=..+.+.+.-....+.|+||.. +|+.+=++|++
T Consensus 166 ~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 166 FQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 1122223322345799999997 89988887765
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=92.90 E-value=0.2 Score=49.53 Aligned_cols=97 Identities=19% Similarity=0.172 Sum_probs=57.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCc---------------HHHHHHHHHhCCCCCCCCCccccCccccccCCcchHH
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDD 557 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 557 (959)
++.||+.++++.|++.|+++.++|..+. .....+.+.+|+.... .........
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~~~~~--------- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG---VLFCPHHPA--------- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE---EEECCCCCC---------
Confidence 4789999999999999999999998763 3455666777774110 000000000
Q ss_pred HHhhcCceeecChhhH--HHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee
Q 002151 558 LIEKADGFAGVFPEHK--FEIVKRLQARKHIVGMTGDGVNDAPALKVADIG 606 (959)
Q Consensus 558 ~i~~~~vfar~~Pe~K--~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG 606 (959)
.....+ .|+-+ ..+.+.+.-..+.+.|+||...|..+-+.|++-
T Consensus 95 ----~~~~~~-KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 95 ----DNCSCR-KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred ----CCCCCC-CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 000011 23221 122222222235699999999999988888763
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=92.84 E-value=0.15 Score=50.41 Aligned_cols=90 Identities=22% Similarity=0.218 Sum_probs=56.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhH
Q 002151 494 PRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHK 573 (959)
Q Consensus 494 lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K 573 (959)
..+|+.+.++.|++.|+++.++|+-....+...-+.. +... ...++ +.+ ++...-.|+-=
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~--f~~i~-~~~----------------~~~~Kp~~~~~ 124 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY--FDLIL-GSD----------------EFGAKPEPEIF 124 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc--CcEEE-ecC----------------CCCCCcCHHHH
Confidence 4479999999999999999999999988888777765 3211 11111 111 11111122211
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCChhhhhcCC
Q 002151 574 FEIVKRLQARKHIVGMTGDGVNDAPALKVAD 604 (959)
Q Consensus 574 ~~iV~~Lq~~g~~V~m~GDGvNDapALk~Ad 604 (959)
..+.+.+.-.. .+.|+||..+|..|-++|+
T Consensus 125 ~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 125 LAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 22223332223 6999999999998877663
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=92.72 E-value=0.4 Score=52.33 Aligned_cols=86 Identities=15% Similarity=0.093 Sum_probs=57.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCCcHH---HHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceee
Q 002151 491 FDPPRHDSAETIRRALDLGVSVKMITGDQLAI---GKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAG 567 (959)
Q Consensus 491 ~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~t---A~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar 567 (959)
..++-|++.+.++.+++.|+++.++|+-.... ....-++.|+.... ... ++.|
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~-~d~-----------------------lllr 171 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQAD-EEH-----------------------LLLK 171 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCC-cce-----------------------EEeC
Confidence 35678999999999999999999999976433 33445667875311 111 1222
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcCChhhh
Q 002151 568 VFPEHKFEIVKRLQARKHIVGMTGDGVNDAPAL 600 (959)
Q Consensus 568 ~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapAL 600 (959)
-....|..-.+.+.+.-.+++|+||-.+|....
T Consensus 172 ~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 172 KDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 112235555556656566899999999998543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=92.58 E-value=29 Score=45.19 Aligned_cols=200 Identities=14% Similarity=0.133 Sum_probs=98.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----CCe-EEE----EECCeEEEEecCCcCCCcEEEEeCCCeecc
Q 002151 99 DFVGILALLIINSTISFIEENNAGNAAAALMARL-----APK-AKV----LRDGKWSEEDASVLVPGDIISIKLGDIIPA 168 (959)
Q Consensus 99 ~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~-----~~~-~~V----~RdG~~~~i~~~~Lv~GDiI~l~~Gd~VPa 168 (959)
-.+++++.++++.+.++.+++..++..+...+.. ..+ ..+ +.-|....+...|.+|.|.+.++. +..=+
T Consensus 134 il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g-~~l~V 212 (941)
T TIGR01517 134 ILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISG-LSLEI 212 (941)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEc-CcEEE
Confidence 3455566667788888888877766544332211 122 222 245889999999999999999964 33445
Q ss_pred ceEEEecCceEEeccccCCCCceeecCCCCcccccceeeeCeEEEEEEEeccchhhhhhhhhhcccCCCCcHHHHHHHHH
Q 002151 169 DARLLEGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVLTSIG 248 (959)
Q Consensus 169 D~~ll~g~~l~Vdes~LTGES~pv~K~~g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~l~~~~~~i~ 248 (959)
|=-.+.|++.-++-. .|+..-+ ..|..+..|+...-=...|.=+.-|.=... +...-.++.-...+.+..+.+.
T Consensus 213 dES~LTGES~pv~K~--~~~~n~v--~~GT~v~~G~~~~iV~~tG~~T~~gki~~~--~~~~~~~t~l~~~~~~~~~~~~ 286 (941)
T TIGR01517 213 DESSITGESDPIKKG--APKDSFL--LSGTVVNEGSGRMLVTAVGVNSFGGKLMME--LRAEGEDTPLQEKLSELAGLIG 286 (941)
T ss_pred EecccCCCCCccccc--CCCCceE--EeCCeEEeeEEEEEEEEeCCCcHHHHHHHh--hccCCCCCcHHHHHHHHHHHHH
Confidence 666666665333221 1322112 346666666533211111222222211110 0010111221223333333333
Q ss_pred HH---HHHHHHHHHHHHHHHh------------HhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHH
Q 002151 249 NF---CICSIAIGMIIEIIII------------YGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGS 305 (959)
Q Consensus 249 ~~---~i~~i~i~~~~~~~~~------------~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~ 305 (959)
.+ +.+.+.+..++.++.. .......+..++..+++.+..++|.+++++++.+....+
T Consensus 287 ~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~ma 358 (941)
T TIGR01517 287 KFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMM 358 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHH
Confidence 22 1111122111111110 001223445566667778888999999999998876544
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.42 E-value=0.21 Score=56.69 Aligned_cols=98 Identities=11% Similarity=0.024 Sum_probs=58.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC---------------CcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchH
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVD 556 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~ 556 (959)
-+|.|++.++++.|+++|+++.++|+= ....+..+.+..|+.. ..++.+.... .
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f----d~i~i~~~~~--s----- 97 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF----DEVLICPHFP--E----- 97 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce----eeEEEeCCcC--c-----
Confidence 368899999999999999999999982 1234555666666631 1111110000 0
Q ss_pred HHHhhcCceeecChhhHHHHHHHH-hh---CCCEEEEEcCCcCChhhhhcCCeeEE
Q 002151 557 DLIEKADGFAGVFPEHKFEIVKRL-QA---RKHIVGMTGDGVNDAPALKVADIGIA 608 (959)
Q Consensus 557 ~~i~~~~vfar~~Pe~K~~iV~~L-q~---~g~~V~m~GDGvNDapALk~AdVGIa 608 (959)
.+..+| .|+ .+++..+ ++ ....+.|+||+.+|..+-+.|++-..
T Consensus 98 -----d~~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 98 -----DNCSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred -----ccCCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 001111 232 2233332 22 23679999999999999888887543
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=92.23 E-value=0.51 Score=50.44 Aligned_cols=105 Identities=23% Similarity=0.176 Sum_probs=68.5
Q ss_pred CCCcchHHHHHHH--HhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCc-chHHHHhhcCceeecC
Q 002151 493 PPRHDSAETIRRA--LDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGL-PVDDLIEKADGFAGVF 569 (959)
Q Consensus 493 ~lr~~v~eaI~~l--~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~-~~~~~i~~~~vfar~~ 569 (959)
|+-|+.++.++.+ ++.|+.++++|-=|..--..+=+.-|+... -+.+.+..-.-.-++. .+.. -+.+-|.++.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~--f~~I~TNpa~~~~~G~l~v~p--yh~h~C~~C~ 146 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDC--FSEIFTNPACFDADGRLRVRP--YHSHGCSLCP 146 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccc--cceEEeCCceecCCceEEEeC--ccCCCCCcCC
Confidence 6788999999999 568999999999998888888888888531 1122222100000000 0000 0012355555
Q ss_pred h-hhHHHHHHHHhhC----C---CEEEEEcCCcCCh-hhhh
Q 002151 570 P-EHKFEIVKRLQAR----K---HIVGMTGDGVNDA-PALK 601 (959)
Q Consensus 570 P-e~K~~iV~~Lq~~----g---~~V~m~GDGvNDa-pALk 601 (959)
| -=|..+++.+++. | ..|.++|||.||- |+++
T Consensus 147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~ 187 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR 187 (234)
T ss_pred CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc
Confidence 5 4799999998875 4 6899999999995 5543
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=92.21 E-value=0.18 Score=49.92 Aligned_cols=93 Identities=17% Similarity=0.029 Sum_probs=64.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
-++||++.+.++.|+ .++++.+.|.=....+..+-+.+|+... +...++.+++. .+.-|.
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d~------------------~~~KP~ 103 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDEC------------------VFVKGK 103 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECccc------------------cccCCe
Confidence 357999999999999 5799999999999999999999887421 11223332211 111232
Q ss_pred hHHHHHHHHhh---CCCEEEEEcCCcCChhhhhcCCeeEE
Q 002151 572 HKFEIVKRLQA---RKHIVGMTGDGVNDAPALKVADIGIA 608 (959)
Q Consensus 572 ~K~~iV~~Lq~---~g~~V~m~GDGvNDapALk~AdVGIa 608 (959)
+.+.+++ ....|.|+||..+|..|-++|.|-|.
T Consensus 104 ----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 ----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 3344443 34679999999999998877766554
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=91.75 E-value=0.26 Score=49.70 Aligned_cols=97 Identities=13% Similarity=0.074 Sum_probs=58.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC---------------cHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHH
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDD 557 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~---------------~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 557 (959)
++-|++.+++++|++.|+++.++|.-. ......+.+.+|+.- . .++.+.... .
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d-~ii~~~~~~---~----- 96 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF---D-DVLICPHFP---D----- 96 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce---e-EEEECCCCC---C-----
Confidence 466899999999999999999999742 334566667777731 0 111110000 0
Q ss_pred HHhhcCceeecChhhHHHHHHH-HhhC---CCEEEEEcCCcCChhhhhcCCeeEE
Q 002151 558 LIEKADGFAGVFPEHKFEIVKR-LQAR---KHIVGMTGDGVNDAPALKVADIGIA 608 (959)
Q Consensus 558 ~i~~~~vfar~~Pe~K~~iV~~-Lq~~---g~~V~m~GDGvNDapALk~AdVGIa 608 (959)
.+... ..|. .++++. +++. ...+.|+||+.+|..+-++|++-..
T Consensus 97 ----~~~~~-~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 97 ----DNCDC-RKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred ----CCCCC-CCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 00001 1232 222222 2222 2459999999999999999887644
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=91.71 E-value=0.7 Score=49.77 Aligned_cols=94 Identities=16% Similarity=0.193 Sum_probs=59.4
Q ss_pred EEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHH--HHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcC
Q 002151 486 GLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGK--ETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKAD 563 (959)
Q Consensus 486 Gli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~--~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~ 563 (959)
|.+.-.+.+-|++++++++|+++|+++.++|.-....+. +..+++|+..+. ...+++..+
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~-~~~Ii~s~~----------------- 78 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADL-PEMIISSGE----------------- 78 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccc-cceEEccHH-----------------
Confidence 455556788999999999999999999999996554443 455778875311 111221100
Q ss_pred ceeecChhhHHHHHHHHhh---CCCEEEEEcCCcCChhhhhcCC
Q 002151 564 GFAGVFPEHKFEIVKRLQA---RKHIVGMTGDGVNDAPALKVAD 604 (959)
Q Consensus 564 vfar~~Pe~K~~iV~~Lq~---~g~~V~m~GDGvNDapALk~Ad 604 (959)
....-+.+.+++ .+..+.|+||+.+|...+..++
T Consensus 79 -------~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 79 -------IAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred -------HHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 001122222233 2456999999999998886543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.36 E-value=0.2 Score=54.05 Aligned_cols=65 Identities=22% Similarity=0.230 Sum_probs=46.9
Q ss_pred cChhhHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcC--------CeeEEecCchHHHHhhccccccCCCchHHHHH
Q 002151 568 VFPEHKFEIVKRLQAR----KHIVGMTGDGVNDAPALKVA--------DIGIAVADSTDAARSASDIVLTEPGLSVIISA 635 (959)
Q Consensus 568 ~~Pe~K~~iV~~Lq~~----g~~V~m~GDGvNDapALk~A--------dVGIamg~gtd~Ak~aADivL~~~~~~~I~~a 635 (959)
-.+-+|...++.+.+. ...+.|+||+.||.+|++.+ ..||+|+.|. .+..|++++ ++...+...
T Consensus 163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~--~~~~~v~~~ 238 (244)
T TIGR00685 163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHL--TGPQQVLEF 238 (244)
T ss_pred eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeC--CCHHHHHHH
Confidence 3356788777776543 34799999999999999999 5888886442 355789988 456655554
Q ss_pred H
Q 002151 636 V 636 (959)
Q Consensus 636 i 636 (959)
+
T Consensus 239 L 239 (244)
T TIGR00685 239 L 239 (244)
T ss_pred H
Confidence 4
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=91.06 E-value=0.81 Score=48.69 Aligned_cols=87 Identities=18% Similarity=0.263 Sum_probs=55.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHH---HHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeec
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGK---ETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGV 568 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~---~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~ 568 (959)
-|+-|++.+.++.+++.|++|+++||....... +-=++.|+.. +....+.+.+.. ..-
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~~d~-----------------~~~ 179 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGLEDS-----------------NKT 179 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCCCCC-----------------Cch
Confidence 478899999999999999999999999865422 2224456642 111222211100 000
Q ss_pred ChhhHHHHHHHHhhCCC-EEEEEcCCcCCh
Q 002151 569 FPEHKFEIVKRLQARKH-IVGMTGDGVNDA 597 (959)
Q Consensus 569 ~Pe~K~~iV~~Lq~~g~-~V~m~GDGvNDa 597 (959)
.-+-|.+.=+.+.+.|+ +++.+||-.+|.
T Consensus 180 ~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 180 VVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred HhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 11226676667777776 678899999986
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=90.59 E-value=0.7 Score=44.60 Aligned_cols=39 Identities=5% Similarity=0.039 Sum_probs=34.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC-CcHHHHHHHHHhC
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGD-QLAIGKETGRRLG 531 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD-~~~tA~~ia~~lG 531 (959)
++.+++.+.++.|++.|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777777666666
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.48 E-value=0.3 Score=51.56 Aligned_cols=97 Identities=11% Similarity=0.108 Sum_probs=60.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.||++++++.| ++++.++|+.....+...=++.|+... .+..++.+.+.. ..+-.|+-
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~-F~~~v~~~~~~~----------------~~KP~p~~ 147 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHY-FPDKLFSGYDIQ----------------RWKPDPAL 147 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHh-CcceEeeHHhcC----------------CCCCChHH
Confidence 4668999999998 489999999988877777777787432 111222222110 01111221
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEe
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAV 609 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIam 609 (959)
=....+.+.-..+.|+|+||..+|..+=++|++-...
T Consensus 148 ~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 148 MFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 1222223322234599999999999999999987653
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=90.00 E-value=0.35 Score=52.41 Aligned_cols=45 Identities=27% Similarity=0.310 Sum_probs=35.5
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHH
Q 002151 571 EHKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDA 615 (959)
Q Consensus 571 e~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~ 615 (959)
..|..-|+.|+++ | +.|..+||..||.+||..++-||.++++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 4688888888875 2 3466789999999999999999999987766
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.44 E-value=1.7 Score=44.82 Aligned_cols=50 Identities=26% Similarity=0.382 Sum_probs=42.4
Q ss_pred eEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHH---hCC
Q 002151 483 EFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRR---LGM 532 (959)
Q Consensus 483 ~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~---lGi 532 (959)
.+-|.+-++|..-|++.|++++|+.++.+|+.+|.-..+.-..+.++ ||+
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 46799999999999999999999999999999998777666555544 565
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=89.31 E-value=0.69 Score=49.14 Aligned_cols=98 Identities=12% Similarity=0.085 Sum_probs=62.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhC---CCCCCCCCccccCccccccCCcchHHHHhhcCceeec
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLG---MGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGV 568 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lG---i~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~ 568 (959)
-++.||+.+++++|+++|+++.++|..+....+.+-+..+ +.. .+.+ .+. ..+...-
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~------~f~~-------------~fd-~~~g~KP 153 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTP------YFSG-------------YFD-TTVGLKT 153 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhh------hcce-------------EEE-eCcccCC
Confidence 4789999999999999999999999988776666554442 210 0000 000 0111111
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEe
Q 002151 569 FPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAV 609 (959)
Q Consensus 569 ~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIam 609 (959)
.|+-=..+.+.+.-....+.|+||...|+.|-++|++-...
T Consensus 154 ~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 154 EAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 22222334444443345699999999999999999986543
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=88.39 E-value=0.49 Score=49.57 Aligned_cols=97 Identities=12% Similarity=-0.012 Sum_probs=55.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHH--HHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecC
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAI--GKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVF 569 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~t--A~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~ 569 (959)
-++.|++.+.++.|++.|+++.++|...... ........++... -..++.+.+. ....-.
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~--fd~v~~s~~~----------------~~~KP~ 154 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL--FDAVVESCLE----------------GLRKPD 154 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh--CCEEEEeeec----------------CCCCCC
Confidence 3678999999999999999999999875432 2222222333210 0111111000 011112
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee
Q 002151 570 PEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG 606 (959)
Q Consensus 570 Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG 606 (959)
|+-=..+.+.+.-....+.|+||...|+.+=++|++-
T Consensus 155 p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 155 PRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 2221222333332335689999999999999998884
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=88.14 E-value=1.5 Score=44.47 Aligned_cols=40 Identities=10% Similarity=0.009 Sum_probs=31.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCcH------------HHHHHHHHhCCC
Q 002151 494 PRHDSAETIRRALDLGVSVKMITGDQLA------------IGKETGRRLGMG 533 (959)
Q Consensus 494 lr~~v~eaI~~l~~aGI~v~miTGD~~~------------tA~~ia~~lGi~ 533 (959)
+-||+.+++++|+++|+++.++|.-... ....+-+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 4489999999999999999999965432 345667778874
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=88.11 E-value=1.6 Score=56.98 Aligned_cols=118 Identities=14% Similarity=0.125 Sum_probs=77.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
.+-||+.+.++.|+++|+++.++|+-....+..+-+++|+.... -..++.+++ +.+..|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~-Fd~iv~~~~------------------~~~~KP~P 221 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM-FDAIVSADA------------------FENLKPAP 221 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH-CCEEEECcc------------------cccCCCCH
Confidence 36789999999999999999999999888888888888884211 122222221 11222322
Q ss_pred --HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEecCc---hHHHHhhccccccCCCchH
Q 002151 573 --KFEIVKRLQARKHIVGMTGDGVNDAPALKVADI-GIAVADS---TDAARSASDIVLTEPGLSV 631 (959)
Q Consensus 573 --K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdV-GIamg~g---td~Ak~aADivL~~~~~~~ 631 (959)
=.+..+.+.-..+.+.|+||..+|+.|-++|++ -|++..+ .+.....+|+++ +++..
T Consensus 222 e~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi--~~l~e 284 (1057)
T PLN02919 222 DIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIR--KDIGN 284 (1057)
T ss_pred HHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEE--CChHH
Confidence 123334444344679999999999999999998 3444322 233445678877 44544
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.83 E-value=1 Score=46.77 Aligned_cols=116 Identities=17% Similarity=0.152 Sum_probs=67.3
Q ss_pred CCCcchHHHHHHHHhCCC-eEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 493 PPRHDSAETIRRALDLGV-SVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI-~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
|.-|+..++|+.+++.|- .++++|--|.---..+-+..|+.+= -+.+.+....-+.++.-.-.-....+-|.++-|.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~--F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDL--FSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHH--HHHHhcCCcccCCCCcEEeecCCCCCccCcCchh
Confidence 677899999999999997 8999999887777777777776310 0011111000000000000000001224444332
Q ss_pred -hHHHHHHHHhhCC-------CEEEEEcCCcCC-hhhhhcCCeeEEec
Q 002151 572 -HKFEIVKRLQARK-------HIVGMTGDGVND-APALKVADIGIAVA 610 (959)
Q Consensus 572 -~K~~iV~~Lq~~g-------~~V~m~GDGvND-apALk~AdVGIamg 610 (959)
=|..++..++..+ ..+-++|||.|| ||.++...--+||-
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 4777776665432 278899999999 58877766666664
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=87.80 E-value=1.2 Score=56.50 Aligned_cols=67 Identities=7% Similarity=0.076 Sum_probs=46.3
Q ss_pred HHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeecCCCCCcchHHHHHHH-HhCCCeEEEEcCCCcHHHHHHHH
Q 002151 450 SVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRA-LDLGVSVKMITGDQLAIGKETGR 528 (959)
Q Consensus 450 ~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l~D~lr~~v~eaI~~l-~~aGI~v~miTGD~~~tA~~ia~ 528 (959)
..++.|.....|.+++-|.. |++-.....-.|-+++.+++++| ++.|+.|.++||.+..+....-.
T Consensus 586 ~i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 586 HIVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred HHHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 34455666667777776654 33322212235667899999997 77799999999999988876654
Q ss_pred H
Q 002151 529 R 529 (959)
Q Consensus 529 ~ 529 (959)
.
T Consensus 653 ~ 653 (854)
T PLN02205 653 P 653 (854)
T ss_pred C
Confidence 3
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=87.22 E-value=1.1e+02 Score=39.86 Aligned_cols=193 Identities=14% Similarity=0.109 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-----------e-EEE----EECCeEEEEecCCcCCCcEEEEeCCCee
Q 002151 103 ILALLIINSTISFIEENNAGNAAAALMARLAP-----------K-AKV----LRDGKWSEEDASVLVPGDIISIKLGDII 166 (959)
Q Consensus 103 I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~-----------~-~~V----~RdG~~~~i~~~~Lv~GDiI~l~~Gd~V 166 (959)
++++..+...+.-+...++.+++.++...... + ..| +.-|....+.+.|.+|-|.+.++..+ +
T Consensus 120 ~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~-l 198 (903)
T PRK15122 120 MVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD-L 198 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc-e
Confidence 33333334445555555666666666443221 1 222 23588999999999999999887433 3
Q ss_pred ccceEEEecCceEEecccc------------CCCCcee-----ecCCCCcccccceeeeCeEEEEEEEeccchhhhhhhh
Q 002151 167 PADARLLEGDPLKIDQSAL------------TGESLPV-----TKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAH 229 (959)
Q Consensus 167 PaD~~ll~g~~l~Vdes~L------------TGES~pv-----~K~~g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~ 229 (959)
=+|=-.+.|++.-|+-... .++..+. .-..|..+.+|+....=...|.=+..|.=... +..
T Consensus 199 ~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~gkI~~~--v~~ 276 (903)
T PRK15122 199 FISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKS--IVG 276 (903)
T ss_pred EEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccHhhHHHHH--hcC
Confidence 4465555565543443321 1221111 12457778888654322222222222321111 111
Q ss_pred hhccc----CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHH
Q 002151 230 LVEST----THVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAI 303 (959)
Q Consensus 230 l~~~~----~~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~ 303 (959)
-... .+..++.+.+..+..++...+. ++..+. .......+..++..+++.+..+.|.++++++..+...
T Consensus 277 -~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~---~~~~~~-~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~ 349 (903)
T PRK15122 277 -TRAQTAFDRGVNSVSWLLIRFMLVMVPVVL---LINGFT-KGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIA 349 (903)
T ss_pred -CCCCCcHHHHHHHHHHHHHHHHHHHHHHhh---hhhhhc-cCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH
Confidence 1111 1113345555544433222111 111111 1112233445566677777888888888888876544
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=86.45 E-value=8.3 Score=43.99 Aligned_cols=61 Identities=20% Similarity=0.211 Sum_probs=42.6
Q ss_pred hHHHHHHHHhhC-------CCEEEEEcCCcCChhhhhcC-----CeeEEecCchHHHHhhccccccCCCchHHHHHH
Q 002151 572 HKFEIVKRLQAR-------KHIVGMTGDGVNDAPALKVA-----DIGIAVADSTDAARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 572 ~K~~iV~~Lq~~-------g~~V~m~GDGvNDapALk~A-----dVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai 636 (959)
+|...|+.|.+. +..+.++||-..|-.|++.. ++||-+|.... ..+|++.| ++.+.+...+
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L--~dp~eV~~fL 355 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSL--QDPSEVMDFL 355 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeC--CCHHHHHHHH
Confidence 788888877653 33689999999999998855 47788874221 24688888 5556555444
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.96 E-value=1.8 Score=45.04 Aligned_cols=95 Identities=9% Similarity=0.021 Sum_probs=55.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHH-HHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETG-RRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia-~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
++.|++.++++.|++.|+++.++|.-+.......- +..++... -..++...+ +....|.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~--fd~v~~s~~------------------~~~~KP~ 143 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA--ADHIYLSQD------------------LGMRKPE 143 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh--cCEEEEecc------------------cCCCCCC
Confidence 47899999999999999999999987655433221 11233210 011111111 1111222
Q ss_pred --hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeE
Q 002151 572 --HKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGI 607 (959)
Q Consensus 572 --~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGI 607 (959)
==..+.+.+.-....+.|+||...|+.+-++|++-.
T Consensus 144 p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 144 ARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 112223333333456899999999999999988853
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=85.51 E-value=1.7 Score=48.67 Aligned_cols=48 Identities=19% Similarity=0.248 Sum_probs=39.0
Q ss_pred EEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHH---HHhCCC
Q 002151 486 GLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETG---RRLGMG 533 (959)
Q Consensus 486 Gli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia---~~lGi~ 533 (959)
|.+.-.+.+=|+++++|++|++.|++++++|+....+...+. +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 455555667799999999999999999999999977777777 456663
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=85.47 E-value=2.4 Score=42.97 Aligned_cols=103 Identities=17% Similarity=0.193 Sum_probs=73.2
Q ss_pred HHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCe--EEEEcCC-------CcHHHHH
Q 002151 455 FAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVS--VKMITGD-------QLAIGKE 525 (959)
Q Consensus 455 ~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~--v~miTGD-------~~~tA~~ 525 (959)
+.+.|.|.+.+-.... + ...=++.+-|+..+.+++|++.+.. |.++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDNT-------------L--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNT-------------L--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCCC-------------C--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 6678999888755431 0 1123577889999999999999774 9999975 3788999
Q ss_pred HHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHHhhC-----CCEEEEEcCCc-CChhh
Q 002151 526 TGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQAR-----KHIVGMTGDGV-NDAPA 599 (959)
Q Consensus 526 ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~-----g~~V~m~GDGv-NDapA 599 (959)
+.+.+|+.- + .+..-.|.-..++.+.++.+ -+.++|+||-. -|+-+
T Consensus 101 ~~~~lgIpv-------l---------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~ 152 (168)
T PF09419_consen 101 LEKALGIPV-------L---------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLM 152 (168)
T ss_pred HHHhhCCcE-------E---------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHH
Confidence 999999841 1 12234576666788888765 55799999974 56544
Q ss_pred h
Q 002151 600 L 600 (959)
Q Consensus 600 L 600 (959)
=
T Consensus 153 g 153 (168)
T PF09419_consen 153 G 153 (168)
T ss_pred h
Confidence 3
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.19 E-value=7.1 Score=40.78 Aligned_cols=37 Identities=22% Similarity=0.181 Sum_probs=31.9
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCC
Q 002151 497 DSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMG 533 (959)
Q Consensus 497 ~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 533 (959)
.+.+.+.+|+++|++|+.+|--...--...-+++|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999988877777777888875
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=81.54 E-value=2.5 Score=47.64 Aligned_cols=91 Identities=12% Similarity=0.102 Sum_probs=65.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHH----hCCCCCCCCCccccCccccccCCcchHHHHhhcCceeec
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRR----LGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGV 568 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~----lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~ 568 (959)
++.+++.++++.|++.|+.+.++|.-+...|..+-++ +|+.... + +...
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f--------------------------~-~~~~ 83 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF--------------------------D-ARSI 83 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe--------------------------e-EEEE
Confidence 4578999999999999999999999999999988877 6653210 0 0011
Q ss_pred ChhhHHHHHHHH-hh---CCCEEEEEcCCcCChhhhhcCCeeEEec
Q 002151 569 FPEHKFEIVKRL-QA---RKHIVGMTGDGVNDAPALKVADIGIAVA 610 (959)
Q Consensus 569 ~Pe~K~~iV~~L-q~---~g~~V~m~GDGvNDapALk~AdVGIamg 610 (959)
.++-|.+.++.+ ++ .-..+.|+||...|..+.+++..++.+-
T Consensus 84 ~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 84 NWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred ecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 233344444333 22 2367999999999999999998886553
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=81.52 E-value=2.7 Score=42.95 Aligned_cols=93 Identities=13% Similarity=0.102 Sum_probs=59.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhH
Q 002151 494 PRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHK 573 (959)
Q Consensus 494 lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K 573 (959)
+-| ..++++.|++. ++..++||.....+..+-++.|+..- -..++.+++.. ..+-.|+-=
T Consensus 89 ~~~-~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~--fd~i~~~~~~~----------------~~KP~p~~~ 148 (188)
T PRK10725 89 PLP-LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRY--FDAVVAADDVQ----------------HHKPAPDTF 148 (188)
T ss_pred Ccc-HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhH--ceEEEehhhcc----------------CCCCChHHH
Confidence 335 46899999865 89999999999999998899998531 12233222110 111222222
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee
Q 002151 574 FEIVKRLQARKHIVGMTGDGVNDAPALKVADIG 606 (959)
Q Consensus 574 ~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG 606 (959)
....+.++-....+.|+||..+|+.+=++|++-
T Consensus 149 ~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 149 LRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 233333333334588999999999999988864
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=80.13 E-value=1.2 Score=41.09 Aligned_cols=48 Identities=21% Similarity=0.299 Sum_probs=35.6
Q ss_pred EEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHH---HHhCCC
Q 002151 486 GLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETG---RRLGMG 533 (959)
Q Consensus 486 Gli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia---~~lGi~ 533 (959)
|++...+.+=|+++++|+.|+++|++++.+|.....+...++ +++|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 344556778899999999999999999999999866655555 446664
|
... |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 959 | ||||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 0.0 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-124 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 1e-41 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 6e-41 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 8e-41 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 6e-39 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 2e-26 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 2e-26 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 2e-26 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 3e-25 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 8e-21 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 9e-21 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 8e-10 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 1e-09 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 6e-09 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 6e-09 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 2e-08 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 2e-07 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 2e-07 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 3e-07 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 3e-06 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 7e-06 | ||
| 2o98_P | 52 | Structure Of The 14-3-3 H+-Atpase Plant Complex Len | 6e-05 |
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|2O98|P Chain P, Structure Of The 14-3-3 H+-Atpase Plant Complex Length = 52 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 959 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 0.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-135 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-133 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-123 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 7e-48 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-46 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 4e-43 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 1e-30 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 9e-30 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 3e-29 | |
| 2o98_P | 52 | H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, | 7e-20 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 4e-18 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 4e-16 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 4e-12 | |
| 3m50_P | 31 | N.plumbaginifolia H+-translocating ATPase mRNA; al | 8e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-05 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 1e-04 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 2e-04 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 3e-04 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 3e-04 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 3e-04 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 5e-04 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 8e-04 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 8e-04 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 1168 bits (3024), Expect = 0.0
Identities = 677/891 (75%), Positives = 759/891 (85%), Gaps = 11/891 (1%)
Query: 7 ALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKENKILKFL 66
+LE I E VDLE IPIEEVF+ LKC+ +GL++ E + R+++FG NKLEEKKE+K+LKFL
Sbjct: 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFL 62
Query: 67 GFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNAAA 126
GFMWNPLSWVME AA+MAI LA G G+ D+ DFVGI+ LL+INSTISFIEENNAGNAAA
Sbjct: 63 GFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAA 122
Query: 127 ALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALT 186
ALMA LAPK KVLRDGKWSE++A++LVPGDI+SIKLGDIIPADARLLEGDPLK+DQSALT
Sbjct: 123 ALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALT 182
Query: 187 GESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVLTS 246
GESLPVTK+PG V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLV+ST VGHFQ+VLT+
Sbjct: 183 GESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242
Query: 247 IGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSH 306
IGNFCICSIAIGM+IEII++Y Q R YR GIDNLLV+LIGGIPIAMPTVLSVTMAIGSH
Sbjct: 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 302
Query: 307 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILT 366
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK L+E VF GV+KD V+L
Sbjct: 303 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE-VFCKGVEKDQVLLF 361
Query: 367 AARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRA 426
AA ASR+ENQDAIDAA+V MLADPKEARA I EVHFLPFNP DKRTALTY D +G HR
Sbjct: 362 AAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRV 421
Query: 427 SKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIG 486
SKGAPEQIL LA D+ KKV S+IDK+AERGLRSL VARQ VP TK+SPG PWEF+G
Sbjct: 422 SKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVG 481
Query: 487 LLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALL-GE 545
LLPLFDPPRHDSAETIRRAL+LGV+VKMITGDQLAIGKETGRRLGMGTNMYPSSALL
Sbjct: 482 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTH 541
Query: 546 KKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADI 605
K + +PV++LIEKADGFAGVFPEHK+EIVK+LQ RKHIVGMTGDGVNDAPALK ADI
Sbjct: 542 KDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADI 601
Query: 606 GIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFL 665
GIAVAD+TDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GF+
Sbjct: 602 GIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFM 661
Query: 666 LLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGSYLA 725
L+ IWEFDF FMVLIIAILNDGTIMTISKDRVKPSP+PDSWKL+EIFATGVV+G Y A
Sbjct: 662 LIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQA 721
Query: 726 LTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIFVT 785
+ TVIFFWA +TDFF + F V+S+R++ N +L AVYLQVS ISQALIFVT
Sbjct: 722 IMTVIFFWAAHKTDFFSDTFGVRSIRDN---------NHELMGAVYLQVSIISQALIFVT 772
Query: 786 RSRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIWLYNIIIYM 845
RSR WSF ERPG LL+ AF+IAQL+ATLI+ A +FA I IGW W +IWLY+I+ Y
Sbjct: 773 RSRSWSFVERPGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYF 832
Query: 846 LLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWASEQRTLH 896
LD K A+ Y LSG+AW ++ +TA T +KD+G+E REA W H
Sbjct: 833 PLDVFKFAIRYILSGKAWLNLFENKTAFTMKKDYGKEEREAQWMRGSHHHH 883
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 1050 bits (2718), Expect = 0.0
Identities = 310/892 (34%), Positives = 487/892 (54%), Gaps = 54/892 (6%)
Query: 9 EAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKENKILKFLGF 68
E + + E++ + T GL+S+EV R +G N+++E+KEN LKFLGF
Sbjct: 62 EEEEEATPGGGRVVPEDMLQ--TDTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGF 119
Query: 69 MWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNAAAAL 128
P+ +VME AA++A L D+ DF I LL++N+ + F++E AG+ L
Sbjct: 120 FVGPIQFVMEGAAVLAAGLE-------DWVDFGVICGLLLLNAVVGFVQEFQAGSIVDEL 172
Query: 129 MARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDP-LKIDQSALTG 187
LA KA VLRDG E +A +VPGDI+ ++ G IIPAD R++ D L++DQSALTG
Sbjct: 173 KKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTG 232
Query: 188 ESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTH-VGHFQQVLTS 246
ESL V K+ GD V++ S K+GE V+ ATG +TF G+AA LV + + GHF +VL
Sbjct: 233 ESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNG 292
Query: 247 IGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSH 306
IG + + ++I + + ++ ++ L I I G+P+ +P V++ TMA+G+
Sbjct: 293 IGTILLILVIFTLLI-VWVSSFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAA 351
Query: 307 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILT 366
L+++ AI ++++AIE +AG+++LCSDKTGTLT NKL++ GVD + ++LT
Sbjct: 352 YLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYT----VAGVDPEDLMLT 407
Query: 367 AARASRLENQ--DAIDAAIVSMLADPKEARAEITE---VHFLPFNPTDKRTALTYTDKNG 421
A A+ + + DAID A + L A++ +++ + F PF+P K+ G
Sbjct: 408 ACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQG 467
Query: 422 KMHRASKGAPEQILNLAWNK----ADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDS 477
+ KGAP +L ++++ + + +FA RG RSLGVAR+
Sbjct: 468 ERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG------- 520
Query: 478 PGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMY 537
G WE +G++P DPPRHD+ +T+ A LG+S+KM+TGD + I +ET R+LG+GTN+Y
Sbjct: 521 -EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIY 579
Query: 538 PSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDA 597
+ L + G V D +E ADGFA VFP+HK+ +V+ LQ R ++V MTGDGVNDA
Sbjct: 580 NAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDA 639
Query: 598 PALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 657
P+LK AD GIAV S+DAARSA+DIV PGL II A+ TSR IF RM Y +Y ++++
Sbjct: 640 PSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALS 699
Query: 658 IRIVLGFLLLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATG 717
I + + L +I +V+ IAI D + I+ D S +P W L +++
Sbjct: 700 IHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLPKLWGMS 759
Query: 718 VVIGSYLALTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTI 777
V++G LA+ T I ++ +N VQ+ G + ++LQ+S
Sbjct: 760 VLLGVVLAVGTWITVTTMY--AQGENGGIVQNF-------------GNMDEVLFLQISLT 804
Query: 778 SQALIFVTRSRGWSFTERPGLLLVTAFIIAQLVATLISALATSDFAGIHKIGWRWTSIIW 837
LIF+TR+ G ++ P L A + ++AT + + IW
Sbjct: 805 ENWLIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWG---WFEHSDTSIVAVVRIW 861
Query: 838 LYNIIIYMLLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREAREAAWA 889
+++ I+ ++ + + ++ + + + ++ QK E +
Sbjct: 862 IFSFGIFCIMGGVYYILQDSV---GFDNLMHGKSPKGNQKQRSLEDFVVSLQ 910
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 431 bits (1111), Expect = e-135
Identities = 197/947 (20%), Positives = 359/947 (37%), Gaps = 174/947 (18%)
Query: 21 IPIEEVFENLKCT-SDGLSSDEVQSRLEVFGHNKLEE-KKENKILKFLGFMWNPLSWVME 78
+ + E+ + + + + GLS+ L G N L + + +KF + L +M
Sbjct: 56 LSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMW 115
Query: 79 AAALMAITLARGGGKDVD------YHDFVGILALLIINSTISFIEENNAGNAAAALMARL 132
AA + + + D + + ++A++++ + +E + N A+ +
Sbjct: 116 VAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLV 175
Query: 133 APKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPV 192
+A V+RDG + +A LV GD++ +K GD +PAD R+L+ K+D S+LTGES P
Sbjct: 176 PQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQ 235
Query: 193 TK-------NPGDG---VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTH------ 236
T+ +P + + + C +G + +V+ TG T G+ A L +
Sbjct: 236 TRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTPIA 295
Query: 237 --VGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLV---ILIGGIPI 291
+ HF ++ + +I G I+ + GY + ++ I++ +P
Sbjct: 296 IEIEHFVDIIAGL------AILFGATFFIVAMC----IGYTF-LRAMVFFMAIVVAYVPE 344
Query: 292 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKI--- 348
+ ++V +++ + RL+ + + K + A+E + V+CSDKTGTLT N++TV +
Sbjct: 345 GLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFD 404
Query: 349 --LIEV-----VFGNGVDKD----MVILTAA----RASRLENQ------------DAIDA 381
+ G D+ + RA+ Q DA +
Sbjct: 405 NHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASET 464
Query: 382 AIVSM----LADPKEARAEITEVHFLPFNPTDKR--TALTYTDKNGKMHRA-SKGAPEQI 434
A++ L + R +V +PFN T+K + T D H KGAPE++
Sbjct: 465 ALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERV 524
Query: 435 LNL----AWNK------ADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWE- 483
L + + G R LG + +
Sbjct: 525 LERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVE 584
Query: 484 ----------FIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQ----LAIGKETG-- 527
F GL+ + DPPR + + + G+ V M+TGD AI G
Sbjct: 585 AMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGII 644
Query: 528 ------RRLGMGTNMYPSSALLGEKKDTIV-------GLPVDDLIEKADG-----FAGVF 569
P + + V + +L+E FA
Sbjct: 645 SEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMVFARTS 704
Query: 570 PEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADS-TDAARSASDIVLTEPG 628
P+ K IV+ Q IV +TGDGVND+PALK ADIG+A+ + +DAA++A+D++L +
Sbjct: 705 PQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDN 764
Query: 629 LSVIISAVLTSRAIFQRMKNYTIY--------AVSITIRIVLGF-LLLTSIWEFDFPPFM 679
+ I++ V R IF +K Y I I + L L
Sbjct: 765 FASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLG--------CIT 816
Query: 680 VLIIAILNDGT-------------IMTIS-KDRVKPSPSPDSWKLREIFATGVVIGSYLA 725
+L I + D IM + ++ + + F G +
Sbjct: 817 ILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQS---F 873
Query: 726 LTTVIFFWAIFETDFFQNHF----------HVQSLRNSGGKKI----PKVLNGQLASAVY 771
+F A+ + +F H+Q L++S G++ + +
Sbjct: 874 AGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFF 933
Query: 772 LQVSTISQALIFVTRSRGWSFTERPGL---LLVTAFIIAQLVATLIS 815
+ + A + + ++R S ++ +LV A + + +
Sbjct: 934 ISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLC 980
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 424 bits (1093), Expect = e-133
Identities = 193/947 (20%), Positives = 358/947 (37%), Gaps = 175/947 (18%)
Query: 21 IPIEEVFENLKC-TSDGLSSDEVQSRLEVFGHNKLEE-KKENKILKFLGFMWNPLSWVME 78
+ ++E+ + GL++ + L G N L + +KF ++ S ++
Sbjct: 51 LSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLW 110
Query: 79 AAALMAI------TLARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNAAAALMARL 132
A++ + + + V + ++I+ S+ +E + + +
Sbjct: 111 IGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMV 170
Query: 133 APKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPV 192
+A V+RDG+ S +A +V GD++ +K GD IPAD R++ K+D S+LTGES P
Sbjct: 171 PQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQ 230
Query: 193 TK-------NPGDG---VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTH------ 236
T+ NP + + + C +G VV+ TG T G+ A L
Sbjct: 231 TRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRTPIA 290
Query: 237 --VGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLV---ILIGGIPI 291
+ HF ++T + ++ +G+ I+ + GY ++ ++ I++ +P
Sbjct: 291 IEIEHFIHIITGV------AVFLGVSFFILSLI----LGYSW-LEAVIFLIGIIVANVPE 339
Query: 292 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKI--- 348
+ ++V + + + R++++ + K + A+E + +CSDKTGTLT N++TV +
Sbjct: 340 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD 399
Query: 349 --LIEV-----VFGNGVDKD----MVILTAA----RASRLENQ------------DAIDA 381
+ E G DK + A RA Q DA ++
Sbjct: 400 NQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASES 459
Query: 382 AIVSM----LADPKEARAEITEVHFLPFNPTDKR--TALTYTDKNGKMHRA-SKGAPEQI 434
A++ + R ++ +PFN T+K + + + KGAPE+I
Sbjct: 460 ALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERI 519
Query: 435 LNL----AWNK------ADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWE- 483
L+ N D+++ + + G R LG +P + G P++
Sbjct: 520 LDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYN-EGYPFDA 578
Query: 484 -----------FIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQ----LAIGKETG- 527
F+GL+ + DPPR + + + G+ V M+TGD AI K G
Sbjct: 579 DEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGI 638
Query: 528 -------RRLGMGTNMYPSSALLGEKKDTIV-------GLPVDDLIEKADG-----FAGV 568
P + V L + L + FA
Sbjct: 639 ISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFART 698
Query: 569 FPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADS-TDAARSASDIVLTEP 627
P+ K IV+ Q + IV +TGDGVND+PALK ADIG+A+ S +D ++ A+D++L +
Sbjct: 699 SPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDD 758
Query: 628 GLSVIISAVLTSRAIFQRMKNYTIY--------AVSITIRIVLGFLL-LTSIWEFDFPPF 678
+ I++ V R IF +K Y + I+ L L
Sbjct: 759 NFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLG--------TV 810
Query: 679 MVLIIAILNDGT-------------IMTIS-KDRVKPSPSPDSWKLREIFATGVVIGSYL 724
+L I + D IM ++ + G++
Sbjct: 811 TILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQA--- 867
Query: 725 ALTTVIFFWAIFETDFFQNHF----------HVQSLRNSGGKKIPKVLNGQL---ASAVY 771
+F + E F + + +S G++ + +
Sbjct: 868 LGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSF 927
Query: 772 LQVSTISQ-ALIFVTRSRGWSFTERP--GLLLVTAFIIAQLVATLIS 815
+ Q A + + ++R S ++ +L+ +A +S
Sbjct: 928 FISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLS 974
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 398 bits (1024), Expect = e-123
Identities = 214/881 (24%), Positives = 347/881 (39%), Gaps = 191/881 (21%)
Query: 22 PIEEVFENLKCTSD-GLSSDEVQSRLEVFGHNKL-EEKKENKILKFLGFMWNPLSWVMEA 79
EE + GL+ D+V+ LE +GHN+L E+ ++ + + L ++
Sbjct: 9 STEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLL 68
Query: 80 AALMAITLA---RGGGKDVDYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKA 136
AA ++ LA G + + IL +LI N+ + +E NA NA AL
Sbjct: 69 AACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMG 128
Query: 137 KVLRDGKWSEE--DASVLVPGDIISIKLGDIIPADARLL--EGDPLKIDQSALTGESLPV 192
KV R + S + A +VPGDI+ + +GD +PAD R+L + L++DQS LTGES+ V
Sbjct: 129 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 188
Query: 193 TKNP----------GDG---VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHV-- 237
K+ D ++SG+ G+ +V TGV T GK + +T
Sbjct: 189 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKT 248
Query: 238 ------GHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGG--- 288
F + L+ + I I + + + I I + + I +
Sbjct: 249 PLQQKLDEFGEQLSKV----ISLICVAVWL-INIGHFNDPVHGGSWIRGAIYYFKIAVAL 303
Query: 289 ----IPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT 344
IP +P V++ +A+G+ R++++ AI + + ++E + V+CSDKTGTLT N+++
Sbjct: 304 AVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMS 363
Query: 345 VDKILIE-------------VVFGNGVDKDMVILTAARASRLENQDAI-----------D 380
V K+ I + G+ + +L + R D + D
Sbjct: 364 VCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCND 423
Query: 381 AAIV--------SMLADPKEA--------------------------------RAEITEV 400
+++ + + E R + +
Sbjct: 424 SSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKE 483
Query: 401 HFLPFNPTDKRTALTYTDKNGKMHRAS-----KGAPEQILNL--------------AWNK 441
L F+ K ++ + KGAPE +++ K
Sbjct: 484 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVK 543
Query: 442 ADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKD------SPGGPWE----FIGLLPLF 491
I + LR L +A ++ P ++ S +E F+G++ +
Sbjct: 544 EKILSVIKEW--GTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGML 601
Query: 492 DPPRHDSAETIRRALDLGVSVKMITGDQ----LAIGKETGRRLGMGTNMYPSSALLGEKK 547
DPPR + +I+ D G+ V MITGD +AI + G + A G +
Sbjct: 602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIG--IFGENEEVADRAYTGREF 659
Query: 548 DTIVGLPVDDLIEKADG---FAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVAD 604
D LP+ + E FA V P HK +IV+ LQ+ I MTGDGVNDAPALK A+
Sbjct: 660 DD---LPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAE 716
Query: 605 IGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY--------AVSI 656
IGIA+ T A++AS++VL + S I++AV RAI+ MK + Y V I
Sbjct: 717 IGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCI 776
Query: 657 TIRIVLGFLL-LTSIWEFDFPPFMVLIIAILNDGT-------------IMTISKDRVKPS 702
+ LG L P +L + ++ DG IM P
Sbjct: 777 FLTAALGLPEALI--------PVQLLWVNLVTDGLPATALGFNPPDLDIM-----DRPPR 823
Query: 703 PSPDS----WKLREIFATGVVIGSYLALTTVIFFWAIFETD 739
+ W A G +G A T W +
Sbjct: 824 SPKEPLISGWLFFRYMAIGGYVG---AATVGAAAWWFMYAE 861
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 181 bits (463), Expect = 7e-48
Identities = 134/544 (24%), Positives = 212/544 (38%), Gaps = 109/544 (20%)
Query: 120 NAGNAAAALMARLAPK-AKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPL 178
G A L+ L K A V+RDGK + GDI+ ++ G+ IP D ++EG+
Sbjct: 197 RTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY 255
Query: 179 KIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTH-- 236
+D+S ++GE +PV K+ GD V+ + G ++ G T + LVE
Sbjct: 256 -VDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 314
Query: 237 ----------VGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILI 286
V +F + T + +AI I H + L+ +L+
Sbjct: 315 PPIQRLADKVVAYF--IPTVLL------VAISAFI-YWYFIAHAPLLF--AFTTLIAVLV 363
Query: 287 GGIPIAM----PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK 342
P A PT L+V G + ++ G + K A+E + + DKTGTLT K
Sbjct: 364 VACPCAFGLATPTALTV----GMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGK 419
Query: 343 LTVDKILIEVVFGNGVDKDMVILTAARASRLENQDA--IDAAIVSMLADPKEARAEITEV 400
V ++V NG +++++ L A E + I AIV + E +V
Sbjct: 420 PEV----TDLVPLNGDERELLRLAAI----AERRSEHPIAEAIVKKALEHGIELGEPEKV 471
Query: 401 HFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAW---NKADIEKKVHSVIDKFAE 457
+ G+ + N + +V ++K
Sbjct: 472 EVIA----------------GE---GVVADGILVGNKRLMEDFGVAVSNEVELALEKLER 512
Query: 458 RGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITG 517
++ VAR G++ + D + + ++ +G+ V MITG
Sbjct: 513 EAKTAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITG 559
Query: 518 DQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIV 577
D + R L +D +I A V P K E V
Sbjct: 560 DNWRSAEAISRELN-----------------------LDLVI------AEVLPHQKSEEV 590
Query: 578 KRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637
K+LQA K +V GDG+NDAPAL AD+GIAV +D A + DIVL L +++A+
Sbjct: 591 KKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 649
Query: 638 TSRA 641
SR
Sbjct: 650 LSRK 653
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 176 bits (449), Expect = 2e-46
Identities = 136/543 (25%), Positives = 222/543 (40%), Gaps = 95/543 (17%)
Query: 120 NAGNAAAALMARLAPK-AKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPL 178
G A L+ L K A V+RDGK + GDI+ ++ G+ IP D ++EG+
Sbjct: 119 RTGEAIKKLVG-LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES- 176
Query: 179 KIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVE----ST 234
+D+S ++GE +PV K+ GD V+ + G ++ G T + LVE S
Sbjct: 177 YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 236
Query: 235 THVGHFQQVLTSIGNFCICSIAIGMIIEII-IIYGHQERGYRVGIDNLLVILIGGIPIAM 293
+ + + F + + + I H + L+ +L+ P A
Sbjct: 237 PPIQRLADKVVAY--FIPTVLLVAISAFIYWYFIAHAPLLF--AFTTLIAVLVVACPCAF 292
Query: 294 ----PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKIL 349
PT ++T+ +G + ++ G + K A+E + + DKTGTLT K V
Sbjct: 293 GLATPT--ALTVGMG--KGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV---- 344
Query: 350 IEVVFGNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTD 409
++V NG +++++ L A R E+ A AIV K+A + +
Sbjct: 345 TDLVPLNGDERELLRLAAIAERRSEHPIA--EAIV------KKALEH-----GIELGEPE 391
Query: 410 KRTALTYTDKNGKMHRASKGAPEQIL--NLAW---NKADIEKKVHSVIDKFAERGLRSLG 464
K + G+ A + IL N + +V ++K ++
Sbjct: 392 KVEVIA-----GEGVVA-----DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVI 441
Query: 465 VARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGK 524
VAR G++ + D + + ++ +G+ V MITGD +
Sbjct: 442 VARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAE 488
Query: 525 ETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARK 584
R L +D +I A V P K E VK+LQA K
Sbjct: 489 AISRELN-----------------------LDLVI------AEVLPHQKSEEVKKLQA-K 518
Query: 585 HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQ 644
+V GDG+NDAPAL AD+GIAV +D A + DIVL L +++A+ SR
Sbjct: 519 EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMS 578
Query: 645 RMK 647
++K
Sbjct: 579 KIK 581
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 4e-43
Identities = 133/546 (24%), Positives = 211/546 (38%), Gaps = 100/546 (18%)
Query: 122 GNAAAALMARLAPK--AKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLK 179
G+A AL+ +L P+ ++ DG E + GD++ ++ G+ IP D + EG
Sbjct: 213 GSAIRALL-KLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF- 270
Query: 180 IDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVE----STT 235
+D+S +TGE +PV K V + + G + G T + +V S
Sbjct: 271 VDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRA 330
Query: 236 HVGHFQQVLTSIGNFCICSIAIGMIIEII-IIYGHQERGYRVGIDNLLVILIGGIPIAMP 294
+ ++ F I + ++ I+ + G Q G+ + +LI IA P
Sbjct: 331 PIQRLADTVSGW--FVPAVILVAVLSFIVWALLGPQPA-LSYGLIAAVSVLI----IACP 383
Query: 295 ------TVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKI 348
T +S+ + +G + +Q G + K A+E M ++ L DKTGTLT +
Sbjct: 384 CALGLATPMSIMVGVG--KGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKL--- 438
Query: 349 LIEVVFGNGVDKDMVILTAARASRLENQD--AIDAAIVSMLADPKEARAEITEVHFLPFN 406
+V + V+ + + L AA LE+Q + AIV A+ + L
Sbjct: 439 -TRIVTDDFVEDNALALAAA----LEHQSEHPLANAIV------HAAKEK-----GLSLG 482
Query: 407 PTDKRTALTYTDKNGKMHRAS-KGAPEQILNLAW---NKADIEKKVHSVIDKFAERGLRS 462
+ A T GK G I N + D + D+ +G
Sbjct: 483 SVEAFEAPT-----GKGVVGQVDGHHVAIGNARLMQEHGGDNAP-LFEKADELRGKGASV 536
Query: 463 LGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAI 522
+ +A LL + DP + + ETI G+ + M+TGD
Sbjct: 537 MFMAVDGKTVA-------------LLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRT 583
Query: 523 GKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQA 582
+ LG + ++ A + PE K IV L+
Sbjct: 584 AEAVAGTLG-----------------------IKKVV------AEIMPEDKSRIVSELKD 614
Query: 583 RKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAI 642
+ IV M GDGVNDAPAL ADIGIA+ TD A ++ + L L I A S +
Sbjct: 615 KGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSEST 674
Query: 643 FQRMKN 648
M N
Sbjct: 675 ---MSN 677
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 1e-30
Identities = 82/338 (24%), Positives = 130/338 (38%), Gaps = 77/338 (22%)
Query: 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLEN 375
+ A E + + DKTGTLT + V ++V N + +++ + A+ LE
Sbjct: 2 RDRQAFERAKDLQAVIFDKTGTLTEGRFGV----TDIVGFNHSEDELLQIAAS----LEA 53
Query: 376 QDA--IDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRAS-KGAPE 432
+ I AAIV +EA ++ A+ GK G
Sbjct: 54 RSEHPIAAAIV------EEAEKR-----GFGLTEVEEFRAIP-----GKGVEGIVNGRRY 97
Query: 433 QILNLAW---NKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLP 489
+++ + ++ V +K ++G + + + E G++
Sbjct: 98 MVVSPGYIRELGIKTDESV----EKLKQQGKTVVFILKNG-------------EVSGVIA 140
Query: 490 LFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDT 549
L D R +S E I + +G+ M+TGD + K LG
Sbjct: 141 LADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELG------------------ 182
Query: 550 IVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAV 609
+DD A V P K E VK +Q K++ M GDGVNDAPAL AD+GIA+
Sbjct: 183 -----LDDYF------AEVLPHEKAEKVKEVQQ-KYVTAMVGDGVNDAPALAQADVGIAI 230
Query: 610 ADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
TD A +DIVL + + V SR + +
Sbjct: 231 GAGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFH 268
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 9e-30
Identities = 88/349 (25%), Positives = 137/349 (39%), Gaps = 87/349 (24%)
Query: 310 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAAR 369
+ G + K A+E + + DKTGTLT K V ++V NG +++++ L A
Sbjct: 15 ELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV----TDLVPLNGDERELLRLAAI- 69
Query: 370 ASRLENQDA--IDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRAS 427
E + I AIV K+A + +K + G+ A
Sbjct: 70 ---AERRSEHPIAEAIV------KKALEH-----GIELGEPEKVEVIA-----GEGVVA- 109
Query: 428 KGAPEQIL--NLAW---NKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPW 482
+ IL N + +V ++K ++ VAR
Sbjct: 110 ----DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNG------------- 152
Query: 483 EFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQ----LAIGKETGRRLGMGTNMYP 538
G++ + D + + ++ +G+ V MITGD AI +E
Sbjct: 153 RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN----------- 201
Query: 539 SSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAP 598
+D +I A V P K E VK+LQA K +V GDG+NDAP
Sbjct: 202 ----------------LDLVI------AEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAP 238
Query: 599 ALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
AL AD+GIAV +D A + DIVL L +++A+ SR ++K
Sbjct: 239 ALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 3e-29
Identities = 34/165 (20%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 483 EFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 542
E I + D PR + + + + + G+ + +++GD+ KE + L
Sbjct: 126 EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELN----------- 174
Query: 543 LGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKV 602
+ + + + PE K I+++L+ + V M GDGVNDA AL +
Sbjct: 175 ------------IQEYY------SNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALAL 216
Query: 603 ADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
AD+ +A+ + D +++ +DI+L + ++ + + + +
Sbjct: 217 ADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} Length = 52 | Back alignment and structure |
|---|
Score = 82.8 bits (204), Expect = 7e-20
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 910 FKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVDHVNPHYTV 959
F ++N +AEEA+RRAEI R RELHTLKG VES KL+GLD++ + Y +
Sbjct: 3 FNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 79.8 bits (198), Expect = 4e-18
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 124 AAAALMARLAPK-AKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQ 182
A L+ L K A V+RDGK + GDI+ ++ G+ IP D ++EG+ +D+
Sbjct: 2 AIKKLVG-LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDE 59
Query: 183 SALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVE 232
S ++GE +PV K+ GD V+ + G ++ G T + LVE
Sbjct: 60 SMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVE 109
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 4e-16
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 120 NAGNAAAALMARLAPK-AKVLRDGKWSEEDASVLVP------GDIISIKLGDIIPADARL 172
A A L++ L A ++ + + V GDII + G P D R+
Sbjct: 4 TMSEALAKLIS-LQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRV 62
Query: 173 LEGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGV 220
+EG +D+S +TGE++PV K PG V +GS + G + ++ AT V
Sbjct: 63 IEGHS-MVDESLITGEAMPVAKKPGSTVIAGSINQNGSL--LICATHV 107
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 4e-12
Identities = 31/159 (19%), Positives = 62/159 (38%), Gaps = 19/159 (11%)
Query: 356 NGVDKDMVILTAARASRLENQ--DAIDAAIVSML--ADPKEARAEITEVHFLPFNPTDKR 411
+G + V+ +A S + + +D A++ + + ++ +PF+ +R
Sbjct: 11 SGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRR 70
Query: 412 TALTYTDKNGKMHRASKGAPEQILNL---AWNKADIE-------KKVHSVIDKFAERGLR 461
++ + KGA ++ILN+ + +I +K+ V D +GLR
Sbjct: 71 MSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLR 130
Query: 462 SLGVARQEVPAGTKDSPGGPWE----FIGLLPLFDPPRH 496
+ VA + +PA D E G + D H
Sbjct: 131 VVAVATKYLPAREGD-YQRADESDLILEGYIAFLDHHHH 168
|
| >3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* Length = 31 | Back alignment and structure |
|---|
Score = 56.5 bits (136), Expect = 8e-11
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 930 RELHTLKGKVESFAKLRGLDVDHVNPHYTV 959
RELHTLKG VE+ KL+GLD++ + Y +
Sbjct: 2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.1 bits (129), Expect = 2e-07
Identities = 109/708 (15%), Positives = 214/708 (30%), Gaps = 216/708 (30%)
Query: 8 LEAISKEAVDLENIP--IEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKENKILKF 65
+A D +++ + + + +S D V L +F L K+E + KF
Sbjct: 26 EDAFVDN-FDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW--TLLSKQEEMVQKF 82
Query: 66 LGFMWNP-LSWVMEAAALMAITLARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNA 124
+ + ++M + ++ D + N F + N
Sbjct: 83 VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRD-------RLYNDNQVFAKYN----- 130
Query: 125 AAALMARLAPKAKV------LRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPL 178
++RL P K+ LR K VL+ G LG G
Sbjct: 131 ----VSRLQPYLKLRQALLELRPAKN------VLIDGV-----LG----------SG--- 162
Query: 179 KIDQSALTGESL---PVTKNPGDGVY--SGSTCKQGEIEAVVIATGVHTFFGKAAHLVES 233
K + + + V ++ + C E V+
Sbjct: 163 K---TWVALDVCLSYKVQCKMDFKIFWLNLKNCN--SPETVLE----------------- 200
Query: 234 TTHVGHFQQVLTSI-GNFCI-CSIAIGMIIEIIIIYGH-----QERGYRVGIDNLLVILI 286
Q++L I N+ + + + I I + + Y N L++L+
Sbjct: 201 -----MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE----NCLLVLL 251
Query: 287 GGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK---- 342
+ + + L +T R + D L + T ++L+
Sbjct: 252 N---VQNAKAWNA-FNLSCKIL-----LTTRFKQV-----TDFLSAATTTHISLDHHSMT 297
Query: 343 LTVDK---ILIEVVFGNGVDKD-----------MVI-LTAAR----ASRLEN-----QDA 378
LT D+ +L++ + + + A + +N D
Sbjct: 298 LTPDEVKSLLLKYL---DCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDK 354
Query: 379 IDAAIVSMLA--DPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILN 436
+ I S L +P E R F L+ + + P +L+
Sbjct: 355 LTTIIESSLNVLEPAEYRK-----MF---------DRLSVFPPSAHI-------PTILLS 393
Query: 437 LAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPRH 496
L W I+ V V++K + L V +Q K+S I +
Sbjct: 394 LIWFD-VIKSDVMVVVNKLHKYSL----VEKQ-----PKES------TISI--------P 429
Query: 497 DSAETIRRALDLGVSV--KMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKD----TI 550
++ L+ ++ ++ D I K + S L+ D +
Sbjct: 430 SIYLELKVKLENEYALHRSIV--DHYNIPKT-----------FDSDDLIPPYLDQYFYSH 476
Query: 551 VG--LPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIA 608
+G L + E+ F VF + +F + ++++ +G +N LK I
Sbjct: 477 IGHHLKNIEHPERMTLFRMVFLDFRF-LEQKIRHDSTAWNASGSILNTLQQLKFYKPYIC 535
Query: 609 VADSTDAARSASDIV--LTEPGLSVIIS--AVLTSRAIFQRMKNYTIY 652
D R + I+ L + ++I S L A+ ++ I+
Sbjct: 536 DNDPKY-ERLVNAILDFLPKIEENLICSKYTDLLRIALMA--EDEAIF 580
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 9e-05
Identities = 50/350 (14%), Positives = 100/350 (28%), Gaps = 105/350 (30%)
Query: 427 SKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRS----LGVARQEVPAGTKDSPGGPW 482
SK A L L W + K ++ KF E LR L + +
Sbjct: 57 SKDAVSGTLRLFWT---LLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQ---RQPSMMTR 110
Query: 483 EFIGLL-------PLFDP---PRHDSAETIRRAL-----DLGVSVK-MI-TGDQ-LAIG- 523
+I +F R +R+AL V + ++ +G +A+
Sbjct: 111 MYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV 170
Query: 524 -KETGRRLGMGTNMY-------PSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFE 575
+ M ++ S + E ++ + ++D + + +
Sbjct: 171 CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN--IKLRIH 228
Query: 576 IVKR-----LQARKH-----IVGMTGDGVNDAPALKVADIG---------IAVADSTDAA 616
++ L+++ + ++ V +A A ++ V D AA
Sbjct: 229 SIQAELRRLLKSKPYENCLLVL----LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAA 284
Query: 617 R----------------------------SASD----IVLTEPGLSVIISAVLTSR-AIF 643
D ++ T P II+ + A +
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATW 344
Query: 644 QRMKNYTIYAVSITIRIVLGFLLLTSIWE-FD----FP-----PFMVLII 683
K+ ++ I L L + FD FP P ++L +
Sbjct: 345 DNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSL 394
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} Length = 168 | Back alignment and structure |
|---|
Score = 42.8 bits (102), Expect = 1e-04
Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Query: 571 EHKFEIVKRLQARKHI----VGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTE 626
K V + + V G+ V+D LK + AD+ A+ A +
Sbjct: 82 SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKC 141
Query: 627 PG 628
G
Sbjct: 142 SG 143
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 2e-04
Identities = 12/65 (18%), Positives = 19/65 (29%), Gaps = 6/65 (9%)
Query: 544 GEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVA 603
+ G K ++ L + M GD V D A K++
Sbjct: 129 NDYIHIDWPHSCKGTCSNQCGCC------KPSVIHELSEPNQYIIMIGDSVTDVEAAKLS 182
Query: 604 DIGIA 608
D+ A
Sbjct: 183 DLCFA 187
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} Length = 176 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 3e-04
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 571 EHKFEIVKRLQARKHI----VGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTE 626
+ K +K+ + I V G+ VND P + +AVA + D R A+ V T
Sbjct: 85 DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTV 144
Query: 627 PG 628
PG
Sbjct: 145 PG 146
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 41.3 bits (98), Expect = 3e-04
Identities = 18/62 (29%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 571 EHKFEIVKRLQARKHI----VGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTE 626
K + L I V GD +NDA LK I A + R S I L +
Sbjct: 78 VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEK 137
Query: 627 PG 628
G
Sbjct: 138 RG 139
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* Length = 188 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 3e-04
Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
Query: 571 EHKFEIVKRLQARKHI----VGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTE 626
+K L + I V GD + D P ++ + +AVAD+ +D V
Sbjct: 100 SNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRI 159
Query: 627 PG 628
G
Sbjct: 160 AG 161
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} Length = 162 | Back alignment and structure |
|---|
Score = 40.5 bits (96), Expect = 5e-04
Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 571 EHKFEIVKRLQARKHI----VGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTE 626
K EI ++++ + + +G GD V D +K +AV ++ + R + +
Sbjct: 83 YKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQR 142
Query: 627 PG 628
G
Sbjct: 143 NG 144
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* Length = 180 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 8e-04
Identities = 25/131 (19%), Positives = 39/131 (29%), Gaps = 35/131 (26%)
Query: 502 IRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEK 561
I+ +D + V +++G I + LG +
Sbjct: 44 IKMLMDADIQVAVLSGRDSPILRRRIADLG-----------------------IKLF--- 77
Query: 562 ADGFAGVFPEHKFEIVKRLQARKHI----VGMTGDGVNDAPALKVADIGIAVADSTDAAR 617
F G K L + + GD D PA AVAD+ +
Sbjct: 78 ---FLGK--LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVK 132
Query: 618 SASDIVLTEPG 628
+A D VL+ G
Sbjct: 133 NAVDHVLSTHG 143
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} Length = 191 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 8e-04
Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 571 EHKFEIVKRLQARKHI----VGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTE 626
K + L+ + GD + D P ++ +G+AV+++ +D
Sbjct: 93 VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTER 152
Query: 627 PG 628
G
Sbjct: 153 TG 154
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 959 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.95 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.95 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.95 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.94 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.94 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.89 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.77 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.41 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.25 | |
| 3m50_P | 31 | N.plumbaginifolia H+-translocating ATPase mRNA; al | 99.23 | |
| 2o98_P | 52 | H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, | 99.2 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.17 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.16 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.16 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.07 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.05 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.05 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.0 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.95 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.92 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.85 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.8 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.75 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.65 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.64 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.62 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.61 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.58 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.55 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.55 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.5 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.47 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.47 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.44 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.41 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.41 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.4 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.37 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.35 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.31 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.28 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.27 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.27 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.24 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.24 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.2 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.17 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.14 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.13 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.12 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.05 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.04 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.01 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.0 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.0 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.98 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.96 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.96 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 97.95 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 97.95 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.94 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 97.93 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.93 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.92 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.91 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.91 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.9 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.89 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 97.87 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.86 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.85 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.82 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.82 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.82 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 97.81 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.78 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.77 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.73 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.64 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.63 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.59 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.58 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.56 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.55 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.55 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.55 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.54 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.51 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 97.51 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.5 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.47 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.47 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.47 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.46 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.45 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.44 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.43 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.43 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.37 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.36 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 97.35 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.31 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.27 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.17 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.17 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.05 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.04 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.91 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 96.88 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.88 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 96.82 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.81 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.7 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.67 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.63 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.57 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.56 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.55 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.53 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.3 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 96.09 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 96.01 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.01 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 95.96 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.91 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.91 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.47 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.45 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.39 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 94.97 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 94.68 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 94.49 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 94.33 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 94.0 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 93.99 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 93.79 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 93.59 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 92.9 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 92.37 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 91.42 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 90.85 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 89.99 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 87.93 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 86.58 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 85.28 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 83.58 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 81.33 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-150 Score=1396.33 Aligned_cols=876 Identities=77% Similarity=1.202 Sum_probs=741.2
Q ss_pred hHHhhhhcccccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 002151 7 ALEAISKEAVDLENIPIEEVFENLKCTSDGLSSDEVQSRLEVFGHNKLEEKKENKILKFLGFMWNPLSWVMEAAALMAIT 86 (959)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~fl~~~~~~~~~~l~~aails~~ 86 (959)
++++.+++..++|.++.+|++++|+++.+|||++|+++|+++||+|++++++++.|+.|++||++|+.|+|+++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~il~~aaiis~~ 82 (885)
T 3b8c_A 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIA 82 (885)
T ss_dssp ---------CCCSSSSTTCCTTTSSSCSSCSTHHHHHHHSSSCCSCCTTTTCCCTTSSTTSCCCGGGSSHHHHHHHGGGG
T ss_pred chhhhhhcchhhHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47888889999999999999999999989999999999999999999998888888899999999999999999999998
Q ss_pred HhhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCCCcEEEEeCCCee
Q 002151 87 LARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDII 166 (959)
Q Consensus 87 ~~~~~~~~~~~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l~~Gd~V 166 (959)
++...+.+.+|.++++|+++++++++++++||+++++++++|+++.+++++|+|||++++|++++|||||+|.|++||+|
T Consensus 83 l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~I 162 (885)
T 3b8c_A 83 LANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDII 162 (885)
T ss_dssp SSCCTTSCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCC
T ss_pred HHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEE
Confidence 86555555689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEecCceEEeccccCCCCceeecCCCCcccccceeeeCeEEEEEEEeccchhhhhhhhhhcccCCCCcHHHHHHH
Q 002151 167 PADARLLEGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVLTS 246 (959)
Q Consensus 167 PaD~~ll~g~~l~Vdes~LTGES~pv~K~~g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~l~~~~~~ 246 (959)
||||+|++|++|+||||+|||||.|+.|.+||.+|+||.|.+|+++++|++||.+|.+|||++++++..+++|+|+.+++
T Consensus 163 PaDg~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~~ 242 (885)
T 3b8c_A 163 PADARLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242 (885)
T ss_dssp SSCCCCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTTHH
T ss_pred eeceEEEEcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhcccccChHHHHHHH
Confidence 99999999998899999999999999999999999999999999999999999999999999999887788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCceecchhHHhhccC
Q 002151 247 IGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 326 (959)
Q Consensus 247 i~~~~i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~ilvk~~~~iE~Lg~ 326 (959)
++++++..+++++++.+++.|...+.+|...+..++++++++|||+||+++++++++|+.+|+|+|+++|+++++|+||+
T Consensus 243 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~ 322 (885)
T 3b8c_A 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 322 (885)
T ss_dssp HHHHHHHHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhC
Confidence 98875554444333333333444445777889999999999999999999999999999999999999999999999999
Q ss_pred ccEEeeCCCcceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhcccccCChHHHHHHHHhcCchhhhccceEeEeecCC
Q 002151 327 MDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFN 406 (959)
Q Consensus 327 v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~ 406 (959)
+|+||||||||||+|+|+|.+..+. .+.++.++++++.+++.++...++||++.|++.++.++.+.+..++.++++||+
T Consensus 323 v~~Ic~DKTGTLT~n~m~v~~~~~~-~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~pF~ 401 (885)
T 3b8c_A 323 MDVLCSDKTGTLTLNKLSVDKNLVE-VFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFN 401 (885)
T ss_dssp CCCCEEECCCCCSCCCCCCCSCCCC-SSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCCCC
T ss_pred CCEEEECCCCCcccCceEEEEEEEe-ccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCceeecccCC
Confidence 9999999999999999999753322 344466788888888888876678999999999887766666778889999999
Q ss_pred CCCceEEEEEEecCCeEEEEEeCCHHHHHHhhccchhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEE
Q 002151 407 PTDKRTALTYTDKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIG 486 (959)
Q Consensus 407 s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG 486 (959)
|.+|||++++++.+|+.+.++|||||.++++|...++.++.+.+.+++++++|+|++++|++++++.+.+..|++++|+|
T Consensus 402 s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lG 481 (885)
T 3b8c_A 402 PVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVG 481 (885)
T ss_dssp TTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCE
T ss_pred cccceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEE
Confidence 99999999887667888889999999999999865556667888899999999999999999988776777889999999
Q ss_pred EeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccc-cCCcchHHHHhhcCce
Q 002151 487 LLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDT-IVGLPVDDLIEKADGF 565 (959)
Q Consensus 487 li~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~-~~~~~~~~~i~~~~vf 565 (959)
+++++||||||++++|++|+++||+|+|+||||+.||.+||+++||..+..+..++.|.+.+. +++.++++.+++.++|
T Consensus 482 li~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~ 561 (885)
T 3b8c_A 482 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGF 561 (885)
T ss_dssp EEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCE
T ss_pred EEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEE
Confidence 999999999999999999999999999999999999999999999976655667888877766 7888899999999999
Q ss_pred eecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHHHHHHHHH
Q 002151 566 AGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQR 645 (959)
Q Consensus 566 ar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~ 645 (959)
||++|+||.++|+.||++|++|+|||||+||+||||+||||||||+|+|+||++||+|+++|+|++|++++++||++|+|
T Consensus 562 arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~n 641 (885)
T 3b8c_A 562 AGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQR 641 (885)
T ss_dssp ECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHH
T ss_pred EEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCCccHHHHHhcceeeccCchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCccHHHHHHHHHHhhhhhcccccCCCCCCCCCCchhhHHHHHHHHHHHHHHH
Q 002151 646 MKNYTIYAVSITIRIVLGFLLLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGSYLA 725 (959)
Q Consensus 646 i~~~~~~~l~~ni~~v~~~~~~~~~~~~~~~p~~il~i~~~~d~~~~~l~~d~~~~~~~p~~~~~~~~~~~~~~~g~~~~ 725 (959)
|++|+.|+++.|+.+++.+++..++|+++++|++++|+|+++|+.++++++|+++|+++|++|.+.+++.++++.|++++
T Consensus 642 i~~~i~~~l~~n~~~~~~~~~~~~~~~~~l~p~~il~i~l~~d~~~l~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~ 721 (885)
T 3b8c_A 642 MKNYTIYAVSITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQA 721 (885)
T ss_dssp HHHHHHHHHHHTTTTTSTTHHHHSSCSSCSCHHHHHHHHHHHHTTTCCCCCCCCCCSSCCCSTTTTTTTTTHHHHHSSTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCcCcCHHHHHHHHHHHHHHHHhhcccccCcccCCcchhHHHHHHHHHHHHHHHH
Confidence 99999999999998776666666678899999999999999999999999999999999999999988999999999999
Q ss_pred HHHHHHHHHHHhhhccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcccChhHHHHHHHH
Q 002151 726 LTTVIFFWAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQALIFVTRSRGWSFTERPGLLLVTAFI 805 (959)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~~~~~l~~~~~ 805 (959)
+.++++|++++...+++..+|.+...++ ..+.++++|+++++++|+++|++|+++++|+++|+.++.++++
T Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~t~~~~~~~~~~~~~~~~~Rs~~~~~~~~~~~~~~~~~~ 792 (885)
T 3b8c_A 722 IMTVIFFWAAHKTDFFSDTFGVRSIRDN---------NHELMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAFL 792 (885)
T ss_dssp HHHTTSSSCTTTTTTTTCCCCSSCCGGG---------THHHHTTTTTTTSSTTGGGTTCSSSCTTTSTTSTTTTTSGGGS
T ss_pred HHHHHHHHHHHHcCccccccCcccccch---------HHHHHHHHHHHHHHHHHHHHHHhccCCCCcccCccHHHHHHHH
Confidence 9999888776544444433343211111 2345577788888889988999999999999999887776766
Q ss_pred HHHHHHHHHHhhccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhHhhccchhhHHhhhhhhhhhhccccChhhHH
Q 002151 806 IAQLVATLISALATSDFAGIHKIGWRWTSIIWLYNIIIYMLLDPIKVAVGYALSGRAWSLVYNRRTALTAQKDFGREARE 885 (959)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 885 (959)
+.+++.+++++|.++.|+.+.+++|.||+++|+++++++++.|+.|++.|+.+++.+|+..+++|.++++++++|+.+|+
T Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (885)
T 3b8c_A 793 IAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYILSGKAWLNLFENKTAFTMKKDYGKEERE 872 (885)
T ss_dssp STTTTTTSSSSSCCCCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC----------------------------
T ss_pred HHHHHHHHHHHhccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccHhhhhccccccccchhccccccc
Confidence 66666666677766666668899999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHhhhh
Q 002151 886 AAWASEQ 892 (959)
Q Consensus 886 ~~~~~~~ 892 (959)
.+|+.+.
T Consensus 873 ~~~~~~~ 879 (885)
T 3b8c_A 873 AQWMRGS 879 (885)
T ss_dssp -------
T ss_pred ccccccc
Confidence 9998763
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-132 Score=1231.33 Aligned_cols=805 Identities=38% Similarity=0.612 Sum_probs=680.5
Q ss_pred HHHcCCC-CCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhhCCCCCCchhhHHHHHH
Q 002151 27 FENLKCT-SDGLSSDEVQSRLEVFGHNKLEEKKENKILKFLGFMWNPLSWVMEAAALMAITLARGGGKDVDYHDFVGILA 105 (959)
Q Consensus 27 ~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~fl~~~~~~~~~~l~~aails~~~~~~~~~~~~~~~~~~I~~ 105 (959)
.+.|+++ .+|||++|+++|+++||+|++++++++.|..|+.+|++|++++|++++++++++ ++|.++++|++
T Consensus 77 ~~~l~t~~~~GLs~~ea~~r~~~~G~N~l~~~~~~~~~~~l~~f~~~~~~ll~~aai~s~~~-------g~~~~~~~i~~ 149 (920)
T 1mhs_A 77 EDMLQTDTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGFFVGPIQFVMEGAAVLAAGL-------EDWVDFGVICG 149 (920)
T ss_dssp STTTTTCCCCCCCSHHHHHHHHHTSSSSCCCCCCSSHHHHTHHHHHHHHHHHHHHHHHCTTC-------SCSSHHHHHHH
T ss_pred HHHhCCCcCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhHHHHHHHHH
Confidence 3457876 579999999999999999999988889999999999999999999999998876 37889998999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCCCcEEEEeCCCeeccceEEEecCc-eEEeccc
Q 002151 106 LLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDP-LKIDQSA 184 (959)
Q Consensus 106 ~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~-l~Vdes~ 184 (959)
+++++++++++||+++++++++|+++.+++++|+|||++++|++++|||||+|.|++||+|||||+|++|++ +.||||+
T Consensus 150 vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~ 229 (920)
T 1mhs_A 150 LLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSA 229 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCceeeeeccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999996 8999999
Q ss_pred cCCCCceeecCCCCcccccceeeeCeEEEEEEEeccchhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 002151 185 LTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST-THVGHFQQVLTSIGNFCICSIAIGMIIEI 263 (959)
Q Consensus 185 LTGES~pv~K~~g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~i~~i~i~~~~~~ 263 (959)
|||||.|+.|.+||.+|+||.|.+|+++++|++||.+|.+|+|+++++++ .+++++|+.+++++.+++..+++.+++.+
T Consensus 230 LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~ 309 (920)
T 1mhs_A 230 LTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVW 309 (920)
T ss_dssp TSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999887 56899999999999876544333332222
Q ss_pred HHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCceecchhHHhhccCccEEeeCCCcceeeCce
Q 002151 264 IIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL 343 (959)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m 343 (959)
..+...+.++...+..++++++++|||+||++++++++.|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|
T Consensus 310 -~~~~~~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m 388 (920)
T 1mhs_A 310 -VSSFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKL 388 (920)
T ss_dssp -HTTTTTTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCS
T ss_pred -HHHHhcCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccce
Confidence 2222334567788888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEeeecCCCCCHHHHHHHHHHhcccccC--ChHHHHHHHHhcCc---hhhhccceEeEeecCCCCCceEEEEEEe
Q 002151 344 TVDKILIEVVFGNGVDKDMVILTAARASRLENQ--DAIDAAIVSMLADP---KEARAEITEVHFLPFNPTDKRTALTYTD 418 (959)
Q Consensus 344 ~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~~~~--~~i~~ai~~~~~~~---~~~~~~~~~l~~~pF~s~~kr~sv~~~~ 418 (959)
+|.+++ .. ++.++++++..++.|+...+. ||+|.|++..+.+. ......++.++++||+|.+|+|+++++.
T Consensus 389 ~v~~~~---~~-~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~ 464 (920)
T 1mhs_A 389 SLHDPY---TV-AGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVES 464 (920)
T ss_dssp CCCCCB---CC-SCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECC
T ss_pred eEEEEe---ec-CCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhcccchhhccccceeEEeeccCCCCeEEEEEEe
Confidence 998864 22 245555666666666544444 99999999865321 2234567889999999999999999877
Q ss_pred cCCeEEEEEeCCHHHHHHhhcc----chhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeecCCCC
Q 002151 419 KNGKMHRASKGAPEQILNLAWN----KADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPP 494 (959)
Q Consensus 419 ~~g~~~~~~KGa~e~il~~c~~----~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l~D~l 494 (959)
.+|+.+.++|||||.++++|.. .++.++.+.+.+++|+++|+|++++|++. .|++|+|+|+++++|||
T Consensus 465 ~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~--------~e~~l~~lGli~i~Dp~ 536 (920)
T 1mhs_A 465 PQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR--------GEGSWEILGIMPCMDPP 536 (920)
T ss_dssp SSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS--------SSCSCCCCBBCCCCCCC
T ss_pred CCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEec--------cccccEEEEEEEEeccc
Confidence 7788888999999999999975 23456678888999999999999999984 25789999999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCC--CCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 495 RHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMY--PSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 495 r~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
|||++++|++||++||+|+|+||||+.||.+||++|||..+.+ ...+++|. +.++++++.+.+++.++|||++|+|
T Consensus 537 R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~--~~~~~~el~~~~~~~~V~arv~P~~ 614 (920)
T 1mhs_A 537 RHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG--GDMPGSEVYDFVEAADGFAEVFPQH 614 (920)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC--CCGGGGGGGTTTTTTSCEESCCSTH
T ss_pred cccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc--ccCCHHHHHHHHhhCeEEEEeCHHH
Confidence 9999999999999999999999999999999999999964322 22345555 4577788888999999999999999
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 652 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~ 652 (959)
|.++|+.||++|++|+|||||+||+||||+||||||||+|+|+||++||+|+++|+|++|++++++||++|+||++++.|
T Consensus 615 K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~ 694 (920)
T 1mhs_A 615 KYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVY 694 (920)
T ss_dssp HHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCccHHHHHHHHHHhhhhhcccccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 002151 653 AVSITIRIVLGFLLLTSIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLREIFATGVVIGSYLALTTVIFF 732 (959)
Q Consensus 653 ~l~~ni~~v~~~~~~~~~~~~~~~p~~il~i~~~~d~~~~~l~~d~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~ 732 (959)
.++.|+.....+.....+++++++|++++|+++++|++++++++|+..+.++|.+|+.++++..+++.|+++++.+++.|
T Consensus 695 ~l~~n~~~~~~~~~~~~~~~~~l~~~~il~~~l~~d~~~lal~~e~~~~~~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~ 774 (920)
T 1mhs_A 695 RIALSIHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLPKLWGMSVLLGVVLAVGTWITV 774 (920)
T ss_dssp HHHHHHHHHHHHHHHHHSCSCCCCHHHHHHHHHHHTTHHHHCCCCCSGGGGSCCCCCSSSCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHhhhhcccCcccccCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999976444334344567779999999999999998899999998777888888888777778889999998888776
Q ss_pred HHHHhhhccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH-HHhhhhhccCCCcccChhHHHHHHHHHHHHHH
Q 002151 733 WAIFETDFFQNHFHVQSLRNSGGKKIPKVLNGQLASAVYLQVSTISQ-ALIFVTRSRGWSFTERPGLLLVTAFIIAQLVA 811 (959)
Q Consensus 733 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~i~~~rs~~~~~~~~~~~~l~~~~~~~~~~~ 811 (959)
++.+... ...+.. .+ ..+..+++|.+ .+++| +++|++|+.+++|.+.+++++++++++.+++.
T Consensus 775 ~~~~~~~---~~~~~~---~~---------~~~~~T~~f~~-lv~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (920)
T 1mhs_A 775 TTMYAQG---ENGGIV---QN---------FGNMDEVLFLQ-ISLTENWLIFITRANGPFWSSIPSWQLSGAIFLVDILA 838 (920)
T ss_dssp HHHTTTT---TTCCSS---SS---------SSSHHHHHHHH-HHHHHHHHTTSSSCSSSCSCCSCTHHHHHHHHHHHHHH
T ss_pred HHHHHhc---cccccc---ch---------hhHHHHHHHHH-HHHHHHHHHHHhccchhhhcCchHHHHHHHHHHHHHHH
Confidence 6543210 000100 00 11234444444 45555 57899999887666667888888877777777
Q ss_pred HHHHhhccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhHhhccchhhHHhhhhhhhhhh
Q 002151 812 TLISALATSDFAGIHKIGWRWTSIIWLYNIIIYMLLDPIKVAVGYALSGRAWSLVYNRRTALTA 875 (959)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~~~~~~~~~~~ 875 (959)
+++++++ ++...+++|.+|+.+|+++++++++.++.|++.++.. .|++..+.|.+.++
T Consensus 839 ~~~~~~~---~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~---~fd~~~~~~~~~~~ 896 (920)
T 1mhs_A 839 TCFTIWG---WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDSV---GFDNLMHGKSPKGN 896 (920)
T ss_dssp HHHHSSS---STTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCCC---TTHHHHHHHSTTTH
T ss_pred HHHHHhh---hhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhH---HHHHHhccCccccc
Confidence 7776554 4557899999999999999999999999998866543 45555555544333
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-125 Score=1200.75 Aligned_cols=849 Identities=22% Similarity=0.338 Sum_probs=678.0
Q ss_pred hHHhhhhcc-cccccCCHHHHHHHcCCCC-CCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHH
Q 002151 7 ALEAISKEA-VDLENIPIEEVFENLKCTS-DGLSSDEVQSRLEVFGHNKLEEKK-ENKILKFLGFMWNPLSWVMEAAALM 83 (959)
Q Consensus 7 ~~~~~~~~~-~~~~~~~~~~~~~~l~~~~-~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~fl~~~~~~~~~~l~~aail 83 (959)
+++..++|. .+||.++.+|++++|+++. +|||++||++|+++||+|++++++ .+.|..|++||++|++++|++++++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~ 120 (1034)
T 3ixz_A 41 KLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAI 120 (1034)
T ss_pred hHHHHhhhcCcchhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHH
Confidence 566777775 6899999999999999995 799999999999999999998766 5778899999999999999999999
Q ss_pred HHHHhh---CCC---CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCCCcE
Q 002151 84 AITLAR---GGG---KDVDYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDI 157 (959)
Q Consensus 84 s~~~~~---~~~---~~~~~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDi 157 (959)
+++... ..+ ....|.++++|++++++|++++++||+|+++++++|+++.+++++|+|||++++|++++||||||
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDi 200 (1034)
T 3ixz_A 121 CLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDL 200 (1034)
T ss_pred HHHHHHHhhccCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcE
Confidence 887641 111 11246778888888999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCeeccceEEEecCceEEeccccCCCCceeecCCC----------CcccccceeeeCeEEEEEEEeccchhhhhh
Q 002151 158 ISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPG----------DGVYSGSTCKQGEIEAVVIATGVHTFFGKA 227 (959)
Q Consensus 158 I~l~~Gd~VPaD~~ll~g~~l~Vdes~LTGES~pv~K~~g----------~~v~aGt~v~~G~~~~~V~~tG~~T~~gki 227 (959)
|.|++||+|||||+|++|+++.||||+|||||.|+.|.++ |++|+||.|.+|+++++|++||.+|.+|||
T Consensus 201 V~l~~Gd~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI 280 (1034)
T 3ixz_A 201 VEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRI 280 (1034)
T ss_pred EEEcCCceecCCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHH
Confidence 9999999999999999999889999999999999999875 568999999999999999999999999999
Q ss_pred hhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHH
Q 002151 228 AHLVEST-THVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSH 306 (959)
Q Consensus 228 ~~l~~~~-~~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~ 306 (959)
+++++.. .+++|+|+.++++..++...+++..++ +++.+...+.+|...+..++++++++|||+||+++++++++|++
T Consensus 281 ~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~ 359 (1034)
T 3ixz_A 281 ASLASGVENEKTPIAIEIEHFVDIIAGLAILFGAT-FFIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAK 359 (1034)
T ss_pred HHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcchHHHHHHHHHHHHHheeccccHHHHHHHHHHHHH
Confidence 9999876 678999999999988754333222222 22223344567888888999999999999999999999999999
Q ss_pred HhhhCCceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeeec-CCC---------C---C--HHHHHHHHHHhc
Q 002151 307 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVF-GNG---------V---D--KDMVILTAARAS 371 (959)
Q Consensus 307 ~l~k~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~-~~~---------~---~--~~~~l~~aa~~~ 371 (959)
+|+++|++||+++++|+||++++||||||||||+|+|+|.++++.+.. ..+ . + ...++..++.|+
T Consensus 360 rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~ 439 (1034)
T 3ixz_A 360 RLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCN 439 (1034)
T ss_pred HHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999998754211 000 0 0 113445555553
Q ss_pred cc---------------ccCChHHHHHHHHhc----CchhhhccceEeEeecCCCCCceEEEEEEec---CCeEEEEEeC
Q 002151 372 RL---------------ENQDAIDAAIVSMLA----DPKEARAEITEVHFLPFNPTDKRTALTYTDK---NGKMHRASKG 429 (959)
Q Consensus 372 ~~---------------~~~~~i~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~---~g~~~~~~KG 429 (959)
.. ..+||.|.|++.... +....+..++.++.+||+|.+|+|++++... +|+..+++||
T Consensus 440 ~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KG 519 (1034)
T 3ixz_A 440 RAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKG 519 (1034)
T ss_pred cceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeC
Confidence 21 125789999887653 3344567788999999999999998877643 3678999999
Q ss_pred CHHHHHHhhcc----------chhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCC-----------CCCCCCceEEEEe
Q 002151 430 APEQILNLAWN----------KADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTK-----------DSPGGPWEFIGLL 488 (959)
Q Consensus 430 a~e~il~~c~~----------~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~-----------~~~e~~l~~lGli 488 (959)
|||.|+++|.. +++.++.+.+.+++|+.+|+|||++|++.+++.+. +..|++|+|+|++
T Consensus 520 Ape~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv 599 (1034)
T 3ixz_A 520 APERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLV 599 (1034)
T ss_pred ChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEEE
Confidence 99999999973 23556778899999999999999999998865321 2347899999999
Q ss_pred ecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCC----------------------CCccccCcc
Q 002151 489 PLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMY----------------------PSSALLGEK 546 (959)
Q Consensus 489 ~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----------------------~~~~l~g~~ 546 (959)
+++||||++++++|++|+++||+|+|+|||+..||.++|++|||..+.. ...++.|.+
T Consensus 600 ~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 679 (1034)
T 3ixz_A 600 SMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQ 679 (1034)
T ss_pred eccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHh
Confidence 9999999999999999999999999999999999999999999964321 123566666
Q ss_pred ccccCCcchHHHHhhcC--ceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEec-CchHHHHhhcccc
Q 002151 547 KDTIVGLPVDDLIEKAD--GFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVA-DSTDAARSASDIV 623 (959)
Q Consensus 547 ~~~~~~~~~~~~i~~~~--vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~aADiv 623 (959)
.+.+.+.++.+.+.+.. +|||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+|+||++||+|
T Consensus 680 l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~V 759 (1034)
T 3ixz_A 680 LKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMI 759 (1034)
T ss_pred hhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEE
Confidence 66677777777777654 99999999999999999999999999999999999999999999999 9999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCCccHHHHHHHHHHhhhh-hcccccCCCC-
Q 002151 624 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTS-IWEFDFPPFMVLIIAILNDGT-IMTISKDRVK- 700 (959)
Q Consensus 624 L~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~~~~~~~~-~~~~~~~p~~il~i~~~~d~~-~~~l~~d~~~- 700 (959)
+.+++|++|+.++++||++|+||+|++.|.+++|+..++.++++.+ .++.|++|+|+||+|+++|++ ++++++|+..
T Consensus 760 l~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~~~ 839 (1034)
T 3ixz_A 760 LLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAES 839 (1034)
T ss_pred eccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCh
Confidence 9999999999999999999999999999999999998877665544 356789999999999999987 5999998763
Q ss_pred -----CCCCCC-chhh-HHHHHH-HHHHHHHHHHHHHHHHHHHHhh-hcccc-ccccccccCCC-----------CCCCc
Q 002151 701 -----PSPSPD-SWKL-REIFAT-GVVIGSYLALTTVIFFWAIFET-DFFQN-HFHVQSLRNSG-----------GKKIP 759 (959)
Q Consensus 701 -----~~~~p~-~~~~-~~~~~~-~~~~g~~~~~~~~~~~~~~~~~-~~~~~-~~g~~~~~~~~-----------~~~~~ 759 (959)
||++|+ ...+ ++++.+ .+..|+++++.+++.|++.+.. ++.+. .+|......+. .++..
T Consensus 840 ~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (1034)
T 3ixz_A 840 DIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFG 919 (1034)
T ss_pred hhhhCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchh
Confidence 444442 2222 344444 3456888888888777655432 22111 11111000000 00000
Q ss_pred ch-hHHHHHHHHHHHHHHHHHH-HhhhhhccCCCcccC---hhHHHHHHHHHHHHHH---HHHHhhccccccccCchhHH
Q 002151 760 KV-LNGQLASAVYLQVSTISQA-LIFVTRSRGWSFTER---PGLLLVTAFIIAQLVA---TLISALATSDFAGIHKIGWR 831 (959)
Q Consensus 760 ~~-~~~~~~~~~~~~~~i~~~~-~i~~~rs~~~~~~~~---~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 831 (959)
.. ......++++|...+++|+ +.|++|+++.+.++. .|.|+++++++..++. +++|.. -.++...+.+|.
T Consensus 920 ~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~--~~~f~~~~l~~~ 997 (1034)
T 3ixz_A 920 QRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGM--PNIFNFMPIRFQ 997 (1034)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHHHHHHhhhH--HHHhcCCCCCHH
Confidence 00 0011245666677777886 689999977654432 3555555554443332 233322 234556778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhc
Q 002151 832 WTSIIWLYNIIIYMLLDPIKVAVGYAL 858 (959)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~K~~~r~~~ 858 (959)
+|++++++++++++++++.|++.|++.
T Consensus 998 ~w~~~~~~~~~~~~~~e~~K~~~r~~~ 1024 (1034)
T 3ixz_A 998 WWLVPMPFGLLIFVYDEIRKLGVRCCP 1024 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999988764
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-125 Score=1195.93 Aligned_cols=846 Identities=22% Similarity=0.345 Sum_probs=674.9
Q ss_pred HHhhhhcc-cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHH
Q 002151 8 LEAISKEA-VDLENIPIEEVFENLKCT-SDGLSSDEVQSRLEVFGHNKLEEKK-ENKILKFLGFMWNPLSWVMEAAALMA 84 (959)
Q Consensus 8 ~~~~~~~~-~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~fl~~~~~~~~~~l~~aails 84 (959)
+++.+++. .+||.++.+++++.|+++ .+|||++|+++|+++||+|++++++ ++.|..|++||++|++++|+++++++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls 116 (1028)
T 2zxe_A 37 LDELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILC 116 (1028)
T ss_dssp CCTTTTSCCCCCSSSCHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHH
T ss_pred HHHHhhhcCcchhhCCHHHHHHHhCcCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 33444433 689999999999999998 6899999999999999999998764 78888999999999999999999999
Q ss_pred HHHhh-----CCC-CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCCCcEE
Q 002151 85 ITLAR-----GGG-KDVDYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDII 158 (959)
Q Consensus 85 ~~~~~-----~~~-~~~~~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiI 158 (959)
++++. +.. ...+|.++++|+++++++++++++||+++++++++|+++.+++++|+|||++++|++++|||||+|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV 196 (1028)
T 2zxe_A 117 FLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLV 196 (1028)
T ss_dssp HHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEE
T ss_pred HHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEE
Confidence 87642 110 112577788888899999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCeeccceEEEecCceEEeccccCCCCceeecCCCC----------cccccceeeeCeEEEEEEEeccchhhhhhh
Q 002151 159 SIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGD----------GVYSGSTCKQGEIEAVVIATGVHTFFGKAA 228 (959)
Q Consensus 159 ~l~~Gd~VPaD~~ll~g~~l~Vdes~LTGES~pv~K~~g~----------~v~aGt~v~~G~~~~~V~~tG~~T~~gki~ 228 (959)
.|++||+|||||+|++|++++||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||.+|.+|+|+
T Consensus 197 ~l~~Gd~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~ 276 (1028)
T 2zxe_A 197 EVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIA 276 (1028)
T ss_dssp EEETTCBCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHH
T ss_pred EECCCCEeeceEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHH
Confidence 9999999999999999987899999999999999999886 599999999999999999999999999999
Q ss_pred hhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHH
Q 002151 229 HLVEST-THVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHR 307 (959)
Q Consensus 229 ~l~~~~-~~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~ 307 (959)
+++++. .+++|+|+.++++..++..+.++.+++.+++ ....+.+|...+..++++++++|||+||+++++++++|+++
T Consensus 277 ~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~ 355 (1028)
T 2zxe_A 277 TLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFIL-SLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 355 (1028)
T ss_dssp HHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHH
T ss_pred HhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHH
Confidence 999876 6789999999999887554333222222222 22234567788888899999999999999999999999999
Q ss_pred hhhCCceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeee-cC-CC-----------CCH--HHHHHHHHHhcc
Q 002151 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVV-FG-NG-----------VDK--DMVILTAARASR 372 (959)
Q Consensus 308 l~k~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~-~~-~~-----------~~~--~~~l~~aa~~~~ 372 (959)
|+++|++||+++++|+||++|+||||||||||+|+|+|.++++.+. +. ++ .++ ..++..++.|+.
T Consensus 356 mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~ 435 (1028)
T 2zxe_A 356 MARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNR 435 (1028)
T ss_dssp HHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCC
T ss_pred HhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999875321 10 00 011 245566666642
Q ss_pred c---------------ccCChHHHHHHHHhc----CchhhhccceEeEeecCCCCCceEEEEEEec---CCeEEEEEeCC
Q 002151 373 L---------------ENQDAIDAAIVSMLA----DPKEARAEITEVHFLPFNPTDKRTALTYTDK---NGKMHRASKGA 430 (959)
Q Consensus 373 ~---------------~~~~~i~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~---~g~~~~~~KGa 430 (959)
. ..+||.|.|++.++. +....+..++.++++||+|.+|||+++++.. +|+.+.++|||
T Consensus 436 ~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA 515 (1028)
T 2zxe_A 436 AVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGA 515 (1028)
T ss_dssp CEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEEC
T ss_pred CeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCC
Confidence 1 135899999988753 3333456789999999999999999998863 57788999999
Q ss_pred HHHHHHhhcc----------chhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCC-----------CCCCCCceEEEEee
Q 002151 431 PEQILNLAWN----------KADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTK-----------DSPGGPWEFIGLLP 489 (959)
Q Consensus 431 ~e~il~~c~~----------~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~-----------~~~e~~l~~lGli~ 489 (959)
||.|+++|.. +++.++.+.+.+++|+++|+|||++||+++++.+. +..|.+++|+|+++
T Consensus 516 ~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~ 595 (1028)
T 2zxe_A 516 PERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMA 595 (1028)
T ss_dssp HHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEE
T ss_pred cHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeec
Confidence 9999999974 23456778889999999999999999998865321 22368999999999
Q ss_pred cCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCC----------------------CccccCccc
Q 002151 490 LFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSALLGEKK 547 (959)
Q Consensus 490 l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~----------------------~~~l~g~~~ 547 (959)
++||||||++++|++|+++||+|+|+|||+..||.++|++|||..+... ..+++|+++
T Consensus 596 i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l 675 (1028)
T 2zxe_A 596 MIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDL 675 (1028)
T ss_dssp EECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHH
T ss_pred cCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHh
Confidence 9999999999999999999999999999999999999999999743110 235666666
Q ss_pred cccCCcchHHHHhhcC--ceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEec-CchHHHHhhccccc
Q 002151 548 DTIVGLPVDDLIEKAD--GFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVA-DSTDAARSASDIVL 624 (959)
Q Consensus 548 ~~~~~~~~~~~i~~~~--vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~aADivL 624 (959)
+.+.++++++++.+.+ +|||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+|+||++||+|+
T Consensus 676 ~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl 755 (1028)
T 2zxe_A 676 KDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMIL 755 (1028)
T ss_dssp TTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEE
T ss_pred hhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEe
Confidence 6667777888888876 99999999999999999999999999999999999999999999999 79999999999999
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCCccHHHHHHHHHHhhhh-hcccccCCCCC-
Q 002151 625 TEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTS-IWEFDFPPFMVLIIAILNDGT-IMTISKDRVKP- 701 (959)
Q Consensus 625 ~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~~~~~~~~-~~~~~~~p~~il~i~~~~d~~-~~~l~~d~~~~- 701 (959)
++++|++|++++++||++|+||++++.|.++.|+..++.++++.+ ..+.+++|+|++|+|+++|++ .+++++|+..+
T Consensus 756 ~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~~ 835 (1028)
T 2zxe_A 756 LDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESD 835 (1028)
T ss_dssp TTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSSC
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccchh
Confidence 999999999999999999999999999999999988777665543 356789999999999999986 58888887643
Q ss_pred -----CCCCCc--hhhHHHHHH-HHHHHHHHHHHHHHHHHHHHhh-hccc-cccccc---------cccCCCCCCCcc--
Q 002151 702 -----SPSPDS--WKLREIFAT-GVVIGSYLALTTVIFFWAIFET-DFFQ-NHFHVQ---------SLRNSGGKKIPK-- 760 (959)
Q Consensus 702 -----~~~p~~--~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~-~~~~-~~~g~~---------~~~~~~~~~~~~-- 760 (959)
|++|+. ....+.+.. ++..|+++++++++.|++.+.. ++.+ ..+|+. ...++ +...
T Consensus 836 ~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~ 912 (1028)
T 2zxe_A 836 IMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDS---FGQQWT 912 (1028)
T ss_dssp GGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECT---TSCEEC
T ss_pred hhccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccc---cccccc
Confidence 333322 222344444 4577999998888776654321 1110 001110 00000 0000
Q ss_pred ---h-hHHHHHHHHHHHHHHHHHH-HhhhhhccCCCccc--ChhHHHHHHHHHHHHHHHHHHhhcc-ccccccCchhHHH
Q 002151 761 ---V-LNGQLASAVYLQVSTISQA-LIFVTRSRGWSFTE--RPGLLLVTAFIIAQLVATLISALAT-SDFAGIHKIGWRW 832 (959)
Q Consensus 761 ---~-~~~~~~~~~~~~~~i~~~~-~i~~~rs~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 832 (959)
. ......++++|...+++|+ +.|++|+++.+++. .+|.++++++++..++..++.+.+. -.++.+.+.+|.+
T Consensus 913 ~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~ 992 (1028)
T 2zxe_A 913 YEQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKPSW 992 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHHHHTCCCCCCGGG
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHHHHhhhHHhhhcCCCCCHHH
Confidence 0 0111345666666777776 68999998765443 4566666665554444333332221 1234456667777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhh
Q 002151 833 TSIIWLYNIIIYMLLDPIKVAVGYA 857 (959)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~K~~~r~~ 857 (959)
|++++++++++++..++.|++.|++
T Consensus 993 w~~~~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 993 WFCAFPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp GGTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 7788889999999999999987754
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-121 Score=1164.09 Aligned_cols=843 Identities=26% Similarity=0.346 Sum_probs=661.8
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhhCC---
Q 002151 17 DLENIPIEEVFENLKCT-SDGLSSDEVQSRLEVFGHNKLEEKK-ENKILKFLGFMWNPLSWVMEAAALMAITLARGG--- 91 (959)
Q Consensus 17 ~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~fl~~~~~~~~~~l~~aails~~~~~~~--- 91 (959)
+||.++.+|+++.|+++ .+|||++|+++|+++||+|++++++ ++.|..|++||++|++++++++++++++++...
T Consensus 4 ~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~ 83 (995)
T 3ar4_A 4 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 83 (995)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred hhhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 68999999999999998 5799999999999999999999865 678889999999999999999999999875422
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCe--EEEEecCCcCCCcEEEEeCCCeeccc
Q 002151 92 GKDVDYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGK--WSEEDASVLVPGDIISIKLGDIIPAD 169 (959)
Q Consensus 92 ~~~~~~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~--~~~i~~~~Lv~GDiI~l~~Gd~VPaD 169 (959)
+...+|.++++|+++++++++++++||+++++++++|+++.+++++|+|||+ .++|+++||||||+|.|++||+||||
T Consensus 84 ~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD 163 (995)
T 3ar4_A 84 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPAD 163 (995)
T ss_dssp GGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSE
T ss_pred cchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCccccc
Confidence 1123788888888899999999999999999999999999999999999987 69999999999999999999999999
Q ss_pred eEEEe--cCceEEeccccCCCCceeecCCC-------------CcccccceeeeCeEEEEEEEeccchhhhhhhhhhccc
Q 002151 170 ARLLE--GDPLKIDQSALTGESLPVTKNPG-------------DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST 234 (959)
Q Consensus 170 ~~ll~--g~~l~Vdes~LTGES~pv~K~~g-------------~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~ 234 (959)
|+|++ +..|+||||+|||||.|+.|.++ |++|+||.|.+|+++++|++||.+|.+|||+++++++
T Consensus 164 ~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 243 (995)
T 3ar4_A 164 IRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAAT 243 (995)
T ss_dssp EEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTC
T ss_pred EEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhcC
Confidence 99964 55689999999999999999987 6899999999999999999999999999999999876
Q ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHh-c----cccchH----HHHHHHHHHHHhhcCCcchHHHHHHHHHH
Q 002151 235 -THVGHFQQVLTSIGNFCICSIAIGMIIEIIIIYG-H----QERGYR----VGIDNLLVILIGGIPIAMPTVLSVTMAIG 304 (959)
Q Consensus 235 -~~~~~l~~~~~~i~~~~i~~i~i~~~~~~~~~~~-~----~~~~~~----~~~~~~l~llv~~iP~aLp~~~~v~l~~~ 304 (959)
.+++|+|+.+++++.++..++++.+++.+++.+. . .+.+|. ..+..++++++++|||+||+++++++++|
T Consensus 244 ~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~ 323 (995)
T 3ar4_A 244 EQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALG 323 (995)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHH
Confidence 6789999999999887654433333332222111 1 111232 23456788899999999999999999999
Q ss_pred HHHhhhCCceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeee-cC------------CCCC------------
Q 002151 305 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVV-FG------------NGVD------------ 359 (959)
Q Consensus 305 ~~~l~k~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~-~~------------~~~~------------ 359 (959)
+++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+. ++ ..++
T Consensus 324 ~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 403 (995)
T 3ar4_A 324 TRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPI 403 (995)
T ss_dssp HHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEEC
T ss_pred HHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccccccccccc
Confidence 9999999999999999999999999999999999999999999875311 00 0010
Q ss_pred -------HHHHHHHHHHhccc------------ccCChHHHHHHHHhcCc-------h-------------hhhccceEe
Q 002151 360 -------KDMVILTAARASRL------------ENQDAIDAAIVSMLADP-------K-------------EARAEITEV 400 (959)
Q Consensus 360 -------~~~~l~~aa~~~~~------------~~~~~i~~ai~~~~~~~-------~-------------~~~~~~~~l 400 (959)
...+...++.|+.. ..+||.|.|++..+.+. . ..+..++.+
T Consensus 404 ~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 483 (995)
T 3ar4_A 404 RSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKE 483 (995)
T ss_dssp CGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEE
T ss_pred cccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCceE
Confidence 01233344555321 12689999987654210 0 124568899
Q ss_pred EeecCCCCCceEEEEEEecCC-----eEEEEEeCCHHHHHHhhccc----------hhHHHHHHHHHHHH--HHccCeEE
Q 002151 401 HFLPFNPTDKRTALTYTDKNG-----KMHRASKGAPEQILNLAWNK----------ADIEKKVHSVIDKF--AERGLRSL 463 (959)
Q Consensus 401 ~~~pF~s~~kr~sv~~~~~~g-----~~~~~~KGa~e~il~~c~~~----------~~~~~~~~~~i~~~--a~~Glr~l 463 (959)
+.+||+|+||||+++++.++| +...++|||||.|+++|... ++.++.+.+.+++| +++|+|||
T Consensus 484 ~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvL 563 (995)
T 3ar4_A 484 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCL 563 (995)
T ss_dssp EEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEE
T ss_pred EEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEE
Confidence 999999999999999987666 57899999999999999642 34566788889999 99999999
Q ss_pred EEEEeecCCCCC----------CCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCC
Q 002151 464 GVARQEVPAGTK----------DSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMG 533 (959)
Q Consensus 464 ~vA~~~~~~~~~----------~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 533 (959)
++||++++..+. +..|++++|+|+++++||||||++++|+.|+++||+++|+|||+..||.++|++|||.
T Consensus 564 a~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~ 643 (995)
T 3ar4_A 564 ALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIF 643 (995)
T ss_dssp EEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSS
T ss_pred EEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcC
Confidence 999998754321 2237899999999999999999999999999999999999999999999999999996
Q ss_pred CCCC--CCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecC
Q 002151 534 TNMY--PSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVAD 611 (959)
Q Consensus 534 ~~~~--~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~ 611 (959)
.... ...+++|++.+.+.++++.+.+.+..+|||++|+||.++|+.||++|+.|+|+|||+||+||||+||||||||+
T Consensus 644 ~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg~ 723 (995)
T 3ar4_A 644 GENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGS 723 (995)
T ss_dssp CTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEETT
T ss_pred CCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeCC
Confidence 5321 24577888877777778888999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCCccHHHHHHHHHHhhhh
Q 002151 612 STDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLTS-IWEFDFPPFMVLIIAILNDGT 690 (959)
Q Consensus 612 gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~~ni~~v~~~~~~~~-~~~~~~~p~~il~i~~~~d~~ 690 (959)
|+|+|+++||+++++++|+.|++++++||++|+||+|++.|.+++|+..++.++++.+ .++.+++|+|++|+|+++|++
T Consensus 724 g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~nl~~d~~ 803 (995)
T 3ar4_A 724 GTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGL 803 (995)
T ss_dssp SCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTTTHH
T ss_pred CCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988776655443 345689999999999999976
Q ss_pred -hcccccCCCC------CCCCCC-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hccccc-ccc----ccccCCCC
Q 002151 691 -IMTISKDRVK------PSPSPD-SWKLREIFATGVVIGSYLALTTVIFFWAIFET--DFFQNH-FHV----QSLRNSGG 755 (959)
Q Consensus 691 -~~~l~~d~~~------~~~~p~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~-~g~----~~~~~~~~ 755 (959)
++++++++.. ||+.++ +...+..+..+++.|+++++++++.|++.+.. ...... ..+ .+..++..
T Consensus 804 p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 883 (995)
T 3ar4_A 804 PATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPH 883 (995)
T ss_dssp HHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCSC
T ss_pred HHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhcccccccccccc
Confidence 5888887653 333333 22233456677788999988887654432210 000000 000 00000000
Q ss_pred CCC--cchhHHHHHHHHHHHHHHHHHH-HhhhhhccCCCccc---ChhHHHHHHHHHHHHHHHHHHhhcc-ccccccCch
Q 002151 756 KKI--PKVLNGQLASAVYLQVSTISQA-LIFVTRSRGWSFTE---RPGLLLVTAFIIAQLVATLISALAT-SDFAGIHKI 828 (959)
Q Consensus 756 ~~~--~~~~~~~~~~~~~~~~~i~~~~-~i~~~rs~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 828 (959)
+.. .........++++|...+++|+ +.|++|+++.+++. ..++|+++++++..++...+.+.+. -.++.+.+.
T Consensus 884 ~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l 963 (995)
T 3ar4_A 884 FEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKAL 963 (995)
T ss_dssp CSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTHHHHHTTCCCC
T ss_pred ccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 100 0000112345666666677775 67899886544332 2355666655544333322221111 123445677
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHhhcc
Q 002151 829 GWRWTSIIWLYNIIIYMLLDPIKVAVGYALS 859 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~ 859 (959)
+|..|+++++++++++++++++|++.|+++.
T Consensus 964 ~~~~w~~~~~~~~~~~~~~e~~k~~~r~~~~ 994 (995)
T 3ar4_A 964 DLTQWLMVLKISLPVIGLDEILKFIARNYLE 994 (995)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHHHSCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 7777788888999999999999999887653
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-86 Score=805.96 Aligned_cols=527 Identities=22% Similarity=0.344 Sum_probs=451.3
Q ss_pred CchhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEE-CCeEEEEecCCcCCCcEEEEeCCCeeccceEE
Q 002151 95 VDYHDFV-GILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLR-DGKWSEEDASVLVPGDIISIKLGDIIPADARL 172 (959)
Q Consensus 95 ~~~~~~~-~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~R-dG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~l 172 (959)
..|++.+ +|+++++++..++.+.++++.+++++|+++.+++++|+| ||++++|++++|+|||+|.|++||+|||||+|
T Consensus 185 ~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~v 264 (736)
T 3rfu_A 185 AVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEV 264 (736)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEE
Confidence 4566665 566788889999999999999999999999999999988 99999999999999999999999999999999
Q ss_pred EecCceEEeccccCCCCceeecCCCCcccccceeeeCeEEEEEEEeccchhhhhhhhhhccc-CCCCcHHHHHHHHHHHH
Q 002151 173 LEGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST-THVGHFQQVLTSIGNFC 251 (959)
Q Consensus 173 l~g~~l~Vdes~LTGES~pv~K~~g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~ 251 (959)
++|++ .||||+|||||.|+.|.+||.+|+||.+.+|.++++|++||.+|.+|||.++++++ .+++|+|+.++++..++
T Consensus 265 l~G~~-~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~ 343 (736)
T 3rfu_A 265 QEGRS-FVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWF 343 (736)
T ss_dssp CSSCE-EEECSSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHH
T ss_pred EECce-EeeecccCCccccEEeccCCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHH
Confidence 99997 79999999999999999999999999999999999999999999999999999887 78899999999999886
Q ss_pred HHHHHHHHHHHHHHhHhccc-cchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCceecchhHHhhccCccEE
Q 002151 252 ICSIAIGMIIEIIIIYGHQE-RGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVL 330 (959)
Q Consensus 252 i~~i~i~~~~~~~~~~~~~~-~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~ilvk~~~~iE~Lg~v~~i 330 (959)
+..+++..++.+++++.... ..|..++..++++++++|||+||+++++++..+..+++++|+++|+++++|+||++|+|
T Consensus 344 v~~vl~ia~~~~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i 423 (736)
T 3rfu_A 344 VPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTL 423 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEE
Confidence 65444433333333322222 23777889999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCcceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhcccccCChHHHHHHHHhcCchhhhccceEeEeecCCCCCc
Q 002151 331 CSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDK 410 (959)
Q Consensus 331 ~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~k 410 (959)
|||||||||+|+|+|.++.. ++.+.++++.+++..+.. +.||++.|+++++.+. ++......+|++..+
T Consensus 424 ~fDKTGTLT~g~~~v~~i~~-----~~~~~~~~l~~aa~le~~-s~hPla~Aiv~~a~~~-----~~~~~~~~~f~~~~g 492 (736)
T 3rfu_A 424 VVDKTGTLTEGHPKLTRIVT-----DDFVEDNALALAAALEHQ-SEHPLANAIVHAAKEK-----GLSLGSVEAFEAPTG 492 (736)
T ss_dssp EECCBTTTBCSSCEEEEEEE-----SSSCHHHHHHHHHHHHHS-SCCHHHHHHHHHHHTT-----CCCCCCCSCCCCCTT
T ss_pred EEeCCCCCcCCceEEEEEEe-----cCCCHHHHHHHHHHHhhc-CCChHHHHHHHHHHhc-----CCCccCcccccccCC
Confidence 99999999999999999762 366778888877766543 4579999999886432 222234457887777
Q ss_pred eEEEEEEecCCeEEEEEeCCHHHHHHhhccchhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeec
Q 002151 411 RTALTYTDKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPL 490 (959)
Q Consensus 411 r~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l 490 (959)
+.... ..+|+. +.+|+++.+.+.+... ..+.+..++++++|+|++++|++. +++|++++
T Consensus 493 ~gv~~--~~~g~~--~~~G~~~~~~~~~~~~----~~~~~~~~~~~~~G~~vl~va~d~-------------~~~G~i~i 551 (736)
T 3rfu_A 493 KGVVG--QVDGHH--VAIGNARLMQEHGGDN----APLFEKADELRGKGASVMFMAVDG-------------KTVALLVV 551 (736)
T ss_dssp TEEEE--CSSSSC--EEEESHHHHHHHCCCC----HHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEE
T ss_pred ceEEE--EECCEE--EEEcCHHHHHHcCCCh----hHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEe
Confidence 64322 234543 4579999887654332 235566788999999999999864 89999999
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecCh
Q 002151 491 FDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFP 570 (959)
Q Consensus 491 ~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~P 570 (959)
+|++|++++++|++|+++|++++|+|||+..+|..+|+++||. +++++++|
T Consensus 552 ~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~-----------------------------~v~a~~~P 602 (736)
T 3rfu_A 552 EDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK-----------------------------KVVAEIMP 602 (736)
T ss_dssp ECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC-----------------------------CEECSCCH
T ss_pred eccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC-----------------------------EEEEecCH
Confidence 9999999999999999999999999999999999999999994 37999999
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHH
Q 002151 571 EHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 650 (959)
Q Consensus 571 e~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~ 650 (959)
+||.++|+.||++|+.|+|+|||+||+|||++||||||||+|+|+++++||+|+++++++.|+.++++||++++||++|+
T Consensus 603 ~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl 682 (736)
T 3rfu_A 603 EDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNL 682 (736)
T ss_dssp HHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-hccCCccHHHHHHH
Q 002151 651 IYAVSITIRIVLGFLLLTS-IWEFDFPPFMVLII 683 (959)
Q Consensus 651 ~~~l~~ni~~v~~~~~~~~-~~~~~~~p~~il~i 683 (959)
.|++.+|+..+....+..+ ++++.++|+.-...
T Consensus 683 ~~a~~yN~~~iplAag~l~p~~G~~l~P~~aa~~ 716 (736)
T 3rfu_A 683 FFAFIYNVLGVPLAAGVLYPLTGLLLSPMIAAAA 716 (736)
T ss_dssp HHHHHHHHHHHHHHHTSSTTTSSCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHH
Confidence 9999999876554332222 23556678754433
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-84 Score=790.72 Aligned_cols=528 Identities=25% Similarity=0.369 Sum_probs=440.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCCCcEEEEeCCCeeccceEEEecC
Q 002151 97 YHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGD 176 (959)
Q Consensus 97 ~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~ 176 (959)
|...++++++++++..++.+.++++++++++|+++.+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|+
T Consensus 174 ~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~ 253 (723)
T 3j09_A 174 YETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE 253 (723)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECC
Confidence 33455666677777777777777888889999999999999999999999999999999999999999999999999999
Q ss_pred ceEEeccccCCCCceeecCCCCcccccceeeeCeEEEEEEEeccchhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHH
Q 002151 177 PLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST-THVGHFQQVLTSIGNFCICSI 255 (959)
Q Consensus 177 ~l~Vdes~LTGES~pv~K~~g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~i~~i 255 (959)
+ .||||+|||||.|+.|++||.+|+||.+.+|.++++|++||.+|.+|+|.++++++ .+++++|+.++++..+++..+
T Consensus 254 ~-~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~v 332 (723)
T 3j09_A 254 S-YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTV 332 (723)
T ss_dssp E-EEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHH
T ss_pred e-EEecccccCCCcceeecCCCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHH
Confidence 7 79999999999999999999999999999999999999999999999999999987 678999999999998865544
Q ss_pred HHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCceecchhHHhhccCccEEeeCCC
Q 002151 256 AIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKT 335 (959)
Q Consensus 256 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~ilvk~~~~iE~Lg~v~~i~~DKT 335 (959)
.+..++.++.++...+.++...+..++++++.+|||+||+++++++..+..+++++|+++|+++++|+||++|++|||||
T Consensus 333 l~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKT 412 (723)
T 3j09_A 333 LLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKT 412 (723)
T ss_dssp HHHHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHH
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCC
Confidence 43333333322222244566778889999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhcccccCChHHHHHHHHhcCchhhhccceEeEeecCCCCCceEEEE
Q 002151 336 GTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALT 415 (959)
Q Consensus 336 GTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~ 415 (959)
||||+|+|+|.++. .. +.+.++++.+++.++.. +.||++.|+++.+.+........ .+|++...+. +.
T Consensus 413 GTLT~g~~~v~~~~---~~--~~~~~~~l~~aa~~e~~-s~hP~~~Ai~~~a~~~~~~~~~~-----~~~~~~~g~g-~~ 480 (723)
T 3j09_A 413 GTLTKGKPEVTDLV---PL--NGDERELLRLAAIAERR-SEHPIAEAIVKKALEHGIELGEP-----EKVEVIAGEG-VV 480 (723)
T ss_dssp HHTSCSCCEEEEEE---ES--SSCHHHHHHHHHHHHTT-CCSHHHHHHHHHHHHTTCCCCSC-----CCCEEETTTE-EE
T ss_pred CccccCceEEEEEE---eC--CCCHHHHHHHHHHHhcc-CCCchhHHHHHHHHhcCCCcCCc-----cceEEecCCc-eE
Confidence 99999999999976 22 45777888887776554 46799999998764221111111 1121111111 00
Q ss_pred EEecCCeEEEEEeCCHHHHHHhhccchhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeecCCCCC
Q 002151 416 YTDKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPR 495 (959)
Q Consensus 416 ~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l~D~lr 495 (959)
. ..+.+|+++.+.+... +..+.+.+..++++++|+|+++++++. +++|+++++|++|
T Consensus 481 ~-------~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~va~~~-------------~~~G~i~i~D~~~ 537 (723)
T 3j09_A 481 A-------DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLK 537 (723)
T ss_dssp E-------TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEEECCSC
T ss_pred E-------EEEEECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEeecCCcc
Confidence 0 2356799887765332 223456777889999999999999854 8999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHH
Q 002151 496 HDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFE 575 (959)
Q Consensus 496 ~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~ 575 (959)
|+++++|++|+++||+++|+|||+..+|.++|+++|+. .+|++++|+||.+
T Consensus 538 ~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~-----------------------------~~~~~~~P~~K~~ 588 (723)
T 3j09_A 538 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD-----------------------------LVIAEVLPHQKSE 588 (723)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------EEECSCCTTCHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc-----------------------------EEEccCCHHHHHH
Confidence 99999999999999999999999999999999999994 4799999999999
Q ss_pred HHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002151 576 IVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 655 (959)
Q Consensus 576 iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~ 655 (959)
+|+.||++ +.|+|+|||.||+|||++||||||||+|+|+|+++||+|+++++++.++.++++||++|+||++|+.|+++
T Consensus 589 ~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~ 667 (723)
T 3j09_A 589 EVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALI 667 (723)
T ss_dssp HHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHhccCCccHHHHHHHHHHhhhh
Q 002151 656 ITIRIVLGFLLL-TSIWEFDFPPFMVLIIAILNDGT 690 (959)
Q Consensus 656 ~ni~~v~~~~~~-~~~~~~~~~p~~il~i~~~~d~~ 690 (959)
+|+..+...++. ..++++.++|+.-.+...+.+..
T Consensus 668 ~n~~~i~~a~~~~~~~~g~~l~p~~a~~~m~~ss~~ 703 (723)
T 3j09_A 668 YNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVS 703 (723)
T ss_dssp HHHHHHHHHHHTTSSCCCCSCCHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHhhhhccccccCHHHHHHHHhccHHH
Confidence 998754433322 22355678887655544444443
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-84 Score=783.59 Aligned_cols=528 Identities=25% Similarity=0.367 Sum_probs=439.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCCCcEEEEeCCCeeccceEEEecC
Q 002151 97 YHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGD 176 (959)
Q Consensus 97 ~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~ 176 (959)
|...++++++++++..++.+.++++++++++|+++.+++++|+|||++++|+++||+|||+|.|++||+|||||+|++|+
T Consensus 96 ~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~ 175 (645)
T 3j08_A 96 YETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE 175 (645)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECc
Confidence 33456666777777777777777888889999999999999999999999999999999999999999999999999999
Q ss_pred ceEEeccccCCCCceeecCCCCcccccceeeeCeEEEEEEEeccchhhhhhhhhhccc-CCCCcHHHHHHHHHHHHHHHH
Q 002151 177 PLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST-THVGHFQQVLTSIGNFCICSI 255 (959)
Q Consensus 177 ~l~Vdes~LTGES~pv~K~~g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~i~~i 255 (959)
+ .||||+|||||.|+.|++||.+|+||.+.+|.++++|++||.+|.+|+|.++++++ .+++++|+.++++..+++..+
T Consensus 176 ~-~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~v 254 (645)
T 3j08_A 176 S-YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTV 254 (645)
T ss_dssp E-EEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHH
T ss_pred E-EEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHH
Confidence 7 89999999999999999999999999999999999999999999999999999987 678999999999998865544
Q ss_pred HHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCceecchhHHhhccCccEEeeCCC
Q 002151 256 AIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKT 335 (959)
Q Consensus 256 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~ilvk~~~~iE~Lg~v~~i~~DKT 335 (959)
.+..++.++.++...+.++...+..++++++.+|||+||+++++++..+..+++|+|+++|+++++|+||++|++|||||
T Consensus 255 l~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKT 334 (645)
T 3j08_A 255 LLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKT 334 (645)
T ss_dssp HHHHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGG
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCc
Confidence 43333333322222234566677788999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhcccccCChHHHHHHHHhcCchhhhccceEeEeecCCCCCceEEEE
Q 002151 336 GTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALT 415 (959)
Q Consensus 336 GTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~ 415 (959)
||||+|+|+|.++.. . +.+.++++.+++.++.. +.||++.|+++.+.+........ .+|++...+.. .
T Consensus 335 GTLT~~~~~v~~~~~---~--~~~~~~~l~~aa~~e~~-s~hPla~Aiv~~a~~~g~~~~~~-----~~~~~~~g~g~-~ 402 (645)
T 3j08_A 335 GTLTKGKPEVTDLVP---L--NGDERELLRLAAIAERR-SEHPIAEAIVKKALEHGIELGEP-----EKVEVIAGEGV-V 402 (645)
T ss_dssp GTSSSSCCEEEEEEE---S--SSCHHHHHHHHHHHHTT-CCSHHHHHHHHHHHHTTCCCCSC-----CCCEEETTTEE-E
T ss_pred ccccCCCeEEEEEEe---C--CCCHHHHHHHHHHHhhc-CCChhHHHHHHHHHhcCCCcCCc-----cceEEecCCce-E
Confidence 999999999999762 2 45777888887776553 46799999998764321111111 11211111110 0
Q ss_pred EEecCCeEEEEEeCCHHHHHHhhccchhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeecCCCCC
Q 002151 416 YTDKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPR 495 (959)
Q Consensus 416 ~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l~D~lr 495 (959)
. ..+.+|+++.+.+... +..+.+.+..++++++|+|+++++++. +++|+++++|++|
T Consensus 403 ~-------~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~l~va~~~-------------~~~G~i~~~D~l~ 459 (645)
T 3j08_A 403 A-------DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLK 459 (645)
T ss_dssp E-------TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCCCEEEEETT-------------EEEEEEEEECCCT
T ss_pred E-------EEEEECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEecCCch
Confidence 0 2356799887755332 223456677889999999999999864 8999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHH
Q 002151 496 HDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFE 575 (959)
Q Consensus 496 ~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~ 575 (959)
|+++++|++|+++|++++|+|||+..+|.++|+++|+. .+|++++|+||.+
T Consensus 460 ~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~-----------------------------~~~~~~~P~~K~~ 510 (645)
T 3j08_A 460 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD-----------------------------LVIAEVLPHQKSE 510 (645)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------EEECSCCTTCHHH
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC-----------------------------EEEEeCCHHhHHH
Confidence 99999999999999999999999999999999999994 4799999999999
Q ss_pred HHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002151 576 IVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 655 (959)
Q Consensus 576 iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~~~~~~~l~ 655 (959)
+|+.+|++ +.|+|+|||.||+|||++||||||||+|+|+++++||+++++++++.++.++++||++|+||++|+.|+++
T Consensus 511 ~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~ 589 (645)
T 3j08_A 511 EVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALI 589 (645)
T ss_dssp HHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHhccCCccHHHHHHHHHHhhhh
Q 002151 656 ITIRIVLGFLLL-TSIWEFDFPPFMVLIIAILNDGT 690 (959)
Q Consensus 656 ~ni~~v~~~~~~-~~~~~~~~~p~~il~i~~~~d~~ 690 (959)
+|+..+...++. ..+|++.++|+.-.+...+.+..
T Consensus 590 ~N~~~i~la~~~~~~~~g~~l~p~~a~~~m~~ss~~ 625 (645)
T 3j08_A 590 YNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVS 625 (645)
T ss_dssp HHHHHHHHHTTTTTTTCCCSCCHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHhHhhhcccccCHHHHHHHHhcchHH
Confidence 998754433222 22355577887655444444443
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-34 Score=310.63 Aligned_cols=259 Identities=23% Similarity=0.378 Sum_probs=199.4
Q ss_pred HHHHhhhCCceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhcccccCChHHHHH
Q 002151 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLENQDAIDAAI 383 (959)
Q Consensus 304 ~~~~l~k~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai 383 (959)
++.+++|+|+++|+++++|.|+++++||||||||||+|+|.|.++. +.++++.+++..+. .+.||+..++
T Consensus 5 a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~---------~~~~~l~~~~~~e~-~s~hp~a~ai 74 (263)
T 2yj3_A 5 LYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI---------GDSLSLAYAASVEA-LSSHPIAKAI 74 (263)
Confidence 4678999999999999999999999999999999999999998742 23445555555443 3456899888
Q ss_pred HHHhcCchhhhccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhccchhHHHHHHHHHHHHHHccCeEE
Q 002151 384 VSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSL 463 (959)
Q Consensus 384 ~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~Glr~l 463 (959)
...+.+.. ++....-.|.. + -| +|....+-..... +- -..+|.+ +
T Consensus 75 ~~~~~~~g-----~~~~~~~~~~~------~-----~G------~g~~~~~~~~~~~-------~G-----~~~~~~~-~ 119 (263)
T 2yj3_A 75 VKYAKEQG-----VKILEVKDFKE------I-----SG------IGVRGKISDKIIE-------VK-----KAENNND-I 119 (263)
Confidence 77653211 10000000100 0 01 1111111000000 00 0003444 4
Q ss_pred EEEEeecCCCCCCCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCcccc
Q 002151 464 GVARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 543 (959)
Q Consensus 464 ~vA~~~~~~~~~~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~ 543 (959)
.++++. .+.|.+.+.|+++|+++++++.|++.|+++.|+|||+..++..+++++|+.
T Consensus 120 ~~~~~~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~---------- 176 (263)
T 2yj3_A 120 AVYING-------------EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ---------- 176 (263)
Confidence 555544 789999999999999999999999999999999999999999999999984
Q ss_pred CccccccCCcchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhcccc
Q 002151 544 GEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIV 623 (959)
Q Consensus 544 g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADiv 623 (959)
++|+.+.|++|.++++.++..++.|+|+|||.||++|+++|++|+++|.+++.+++.||++
T Consensus 177 -------------------~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v 237 (263)
T 2yj3_A 177 -------------------EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADII 237 (263)
Confidence 3577788999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHHHH
Q 002151 624 LTEPGLSVIISAVLTSRAIFQRMKNY 649 (959)
Q Consensus 624 L~~~~~~~I~~ai~~gR~~~~~i~~~ 649 (959)
++++++..++.++..||+++++|++|
T Consensus 238 ~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 238 LVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 99999999999999999999999975
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.95 E-value=6.2e-28 Score=265.01 Aligned_cols=280 Identities=29% Similarity=0.422 Sum_probs=209.0
Q ss_pred HHHHHhhhCCceecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhcccccCChHHHH
Q 002151 303 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLENQDAIDAA 382 (959)
Q Consensus 303 ~~~~~l~k~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~a 382 (959)
-|+++++|+|+++|+++++|+++++++||||||||||++.+.+.++. ... + +.+.++.+++..+. .+.+|++.+
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~---~~~-~-~~~~~l~~~~~~e~-~s~hp~~~a 81 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLV---PLN-G-DERELLRLAAIAER-RSEHPIAEA 81 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEE---ESS-S-CHHHHHHHHHHHTT-TCCSHHHHH
T ss_pred hhHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEE---eCC-C-CHHHHHHHHHHHhh-cCCCHHHHH
Confidence 36789999999999999999999999999999999999999998876 333 4 77788887776654 456799999
Q ss_pred HHHHhcCchhhhccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhccchhHHHHHHHHHHHHHHccCeE
Q 002151 383 IVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRS 462 (959)
Q Consensus 383 i~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~Glr~ 462 (959)
+...+...+......+.....+ .+ .+ .. ..+.+|.++.+.+.+.. .++.+.+..+.+..+|.++
T Consensus 82 ~~~~~~~~g~~~~~~~~~~~~~-----G~-~~--~~-----~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~ 145 (287)
T 3a1c_A 82 IVKKALEHGIELGEPEKVEVIA-----GE-GV--VA-----DGILVGNKRLMEDFGVA---VSNEVELALEKLEREAKTA 145 (287)
T ss_dssp HHHHHHHTTCCCCCCSCEEEET-----TT-EE--EE-----TTEEEECHHHHHHTTCC---CCHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHhcCCCccccccceeec-----CC-Ce--EE-----EEEEECCHHHHHhcCCC---ccHHHHHHHHHHHhCCCeE
Confidence 8876532110000000111110 00 00 01 12345776654332211 1123445567788899999
Q ss_pred EEEEEeecCCCCCCCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccc
Q 002151 463 LGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 542 (959)
Q Consensus 463 l~vA~~~~~~~~~~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l 542 (959)
+++++.. .+.+.+...++++|++.++++.|+++|+++.++||++...+..+.+.+|+.
T Consensus 146 i~~~~d~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~--------- 203 (287)
T 3a1c_A 146 VIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--------- 203 (287)
T ss_dssp EEEEETT-------------EEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS---------
T ss_pred EEEEECC-------------EEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc---------
Confidence 9999865 899999999999999999999999999999999999999999999999984
Q ss_pred cCccccccCCcchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccc
Q 002151 543 LGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDI 622 (959)
Q Consensus 543 ~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADi 622 (959)
..|..+.|+.|...++.++.. ..|+|+||+.||++|+++|++|++++++.+..++.||+
T Consensus 204 --------------------~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~ 262 (287)
T 3a1c_A 204 --------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDI 262 (287)
T ss_dssp --------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSE
T ss_pred --------------------eeeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhCCE
Confidence 246677799999999999988 88999999999999999999999999777667778999
Q ss_pred cccCCCchHHHHHHHHHHHHHHHHH
Q 002151 623 VLTEPGLSVIISAVLTSRAIFQRMK 647 (959)
Q Consensus 623 vL~~~~~~~I~~ai~~gR~~~~~i~ 647 (959)
++.++++..+..++..+|+++++|+
T Consensus 263 v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 263 VLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp EESSSCTHHHHHHHHTTC-------
T ss_pred EEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 9998999999999999999999885
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-28 Score=227.28 Aligned_cols=110 Identities=31% Similarity=0.509 Sum_probs=105.6
Q ss_pred HHHHHHhccCCeEEEEECCeEEEEecCCcCCCcEEEEeCCCeeccceEEEecCceEEeccccCCCCceeecCCCCccccc
Q 002151 124 AAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGDGVYSG 203 (959)
Q Consensus 124 ~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~l~Vdes~LTGES~pv~K~~g~~v~aG 203 (959)
++++|+++.+++++|+|||++++|++++|+|||+|.+++||+|||||+|++|.+ .||||+|||||.|+.|.+||.+|+|
T Consensus 2 al~~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~~-~vdeS~LTGEs~pv~k~~g~~v~aG 80 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGDEVFGA 80 (113)
T ss_dssp HHHHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTTCEECTT
T ss_pred HHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEceE-EEEccccCCCCccEEECCCCEEEeC
Confidence 567888889999999999999999999999999999999999999999999995 8999999999999999999999999
Q ss_pred ceeeeCeEEEEEEEeccchhhhhhhhhhccc
Q 002151 204 STCKQGEIEAVVIATGVHTFFGKAAHLVEST 234 (959)
Q Consensus 204 t~v~~G~~~~~V~~tG~~T~~gki~~l~~~~ 234 (959)
|.+.+|.++++|++||.+|.+|+|.++++++
T Consensus 81 t~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 81 TINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp CEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred CEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999998754
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-27 Score=228.16 Aligned_cols=116 Identities=30% Similarity=0.487 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHhccCCeEEEEECCe------EEEEecCCcCCCcEEEEeCCCeeccceEEEecCceEEeccccCCCCce
Q 002151 118 ENNAGNAAAALMARLAPKAKVLRDGK------WSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLP 191 (959)
Q Consensus 118 e~~a~~~~~~L~~~~~~~~~V~RdG~------~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~l~Vdes~LTGES~p 191 (959)
++++.+++++|+++.+++++|+|+|+ +++|++++|+|||+|.|++||+|||||+|++|++ .||||+|||||.|
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTGEs~p 80 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMP 80 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTCCSSC
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccCCCcc
Confidence 56788899999999999999999764 7899999999999999999999999999999998 8999999999999
Q ss_pred eecCCCCcccccceeeeCeEEEEEEEeccchhhhhhhhhhccc
Q 002151 192 VTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVEST 234 (959)
Q Consensus 192 v~K~~g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~ 234 (959)
+.|.+|+.+|+||.+.+|.+.++|++||.+|.+|+|.++++++
T Consensus 81 v~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 81 VAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp EECCTTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EEeCCCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999998764
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.7e-26 Score=245.97 Aligned_cols=276 Identities=30% Similarity=0.415 Sum_probs=203.1
Q ss_pred ecchhHHhhccCccEEeeCCCcceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhcccccCChHHHHHHHHhcCchhhh
Q 002151 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEAR 394 (959)
Q Consensus 315 vk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~ 394 (959)
+|+++++|+|++++.||||+|||||.|+|+|.++. .+. + +.+.++.+++..... ..+++..++...+.......
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~---~~~-~-~~~~~~~~~~~~~~~-s~~~~~~a~~~~~~~~g~~~ 74 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIV---GFN-H-SEDELLQIAASLEAR-SEHPIAAAIVEEAEKRGFGL 74 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEE---ESS-S-CHHHHHHHHHHHHTT-CCSHHHHHHHHHHHHTTCCC
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEE---ecC-C-CHHHHHHHHHHhhcc-CCCHHHHHHHHHHHhcCCCC
Confidence 58899999999999999999999999999999876 443 3 777777777665443 34577777766653211111
Q ss_pred ccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhccchhHHHHHHHHHHHHHHccCeEEEEEEeecCCCC
Q 002151 395 AEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGT 474 (959)
Q Consensus 395 ~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~ 474 (959)
.....+...+- +..... .++.. +..|.++.+.+...... ....++..++.+.+.+++..
T Consensus 75 ~~~~~~~~~~g----~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~----- 133 (280)
T 3skx_A 75 TEVEEFRAIPG----KGVEGI---VNGRR--YMVVSPGYIRELGIKTD-------ESVEKLKQQGKTVVFILKNG----- 133 (280)
T ss_dssp CCCEEEEEETT----TEEEEE---ETTEE--EEEECHHHHHHTTCCCC-------TTHHHHHTTTCEEEEEEETT-----
T ss_pred CCccceeecCC----CEEEEE---ECCEE--EEEecHHHHHHcCCCch-------HHHHHHHhCCCeEEEEEECC-----
Confidence 11122222221 111111 13332 23477776655443221 23446677889998888764
Q ss_pred CCCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcc
Q 002151 475 KDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLP 554 (959)
Q Consensus 475 ~~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~ 554 (959)
.++|.+.+.|+++|++.++++.|++.|+++.++||++...+..+.+++|+.
T Consensus 134 --------~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~--------------------- 184 (280)
T 3skx_A 134 --------EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD--------------------- 184 (280)
T ss_dssp --------EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS---------------------
T ss_pred --------EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh---------------------
Confidence 799999999999999999999999999999999999999999999999984
Q ss_pred hHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHH
Q 002151 555 VDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIIS 634 (959)
Q Consensus 555 ~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ 634 (959)
+.|..+.|.+|...++.+.+.. .++|+||+.||++|++.|++|++||++++..+++||+++..+++..+..
T Consensus 185 --------~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~ 255 (280)
T 3skx_A 185 --------DYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAA 255 (280)
T ss_dssp --------EEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHH
T ss_pred --------hHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHH
Confidence 2577888999999999998876 4699999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 002151 635 AVLTSRAIFQRMKNYTIYAVS 655 (959)
Q Consensus 635 ai~~gR~~~~~i~~~~~~~l~ 655 (959)
+++.+|++++++++++.|++.
T Consensus 256 ~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 256 IVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHHHHHTCCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998864
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.6e-24 Score=236.15 Aligned_cols=145 Identities=12% Similarity=-0.003 Sum_probs=116.7
Q ss_pred cCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHH--hhcCceee
Q 002151 490 LFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLI--EKADGFAG 567 (959)
Q Consensus 490 l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i--~~~~vfar 567 (959)
..+++||+++++++.|+++|++++|+|||+..++.++++++|+.... ..+..+ .+ ..++..+...+ +..++|++
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~--~~i~~n-~l-~~~~~~~~~~~~~~~i~~~~k 213 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSN--VKVVSN-FM-DFDENGVLKGFKGELIHVFNK 213 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTT--EEEEEE-CE-EECTTSBEEEECSSCCCTTCH
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCccc--ceEEee-eE-EEcccceeEeccccccchhhc
Confidence 35799999999999999999999999999999999999999986421 011111 00 01111111000 11357899
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhh---cCCeeEEec-------CchHHHHhhccccccCCCchHHHHHHH
Q 002151 568 VFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALK---VADIGIAVA-------DSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 568 ~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk---~AdVGIamg-------~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
..|.+|...+..+++.++.|+|+|||+||+||+| +|||||||| +++|++++++||||++|++..++.+|.
T Consensus 214 ~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~il 293 (297)
T 4fe3_A 214 HDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSIL 293 (297)
T ss_dssp HHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHHH
T ss_pred ccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHHH
Confidence 9999999999999999999999999999999955 999999999 799999999999999999999999886
Q ss_pred H
Q 002151 638 T 638 (959)
Q Consensus 638 ~ 638 (959)
.
T Consensus 294 ~ 294 (297)
T 4fe3_A 294 Q 294 (297)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.6e-18 Score=172.78 Aligned_cols=139 Identities=19% Similarity=0.327 Sum_probs=116.2
Q ss_pred CCCCHHHHHHHHHHhcc--cccCChHHHHHHHHhcCc--hhhhccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCH
Q 002151 356 NGVDKDMVILTAARASR--LENQDAIDAAIVSMLADP--KEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAP 431 (959)
Q Consensus 356 ~~~~~~~~l~~aa~~~~--~~~~~~i~~ai~~~~~~~--~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~ 431 (959)
.|.+.+.++.+|+.++. ....||+|.|++..+... ...+..++.++++||||.+|||+++++.++|+..+++||||
T Consensus 11 ~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGAp 90 (170)
T 3gwi_A 11 SGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGAL 90 (170)
T ss_dssp TSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECH
T ss_pred CCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCc
Confidence 47788899999999984 456899999999876432 23356799999999999999999999877788899999999
Q ss_pred HHHHHhhcc----------chhHHHHHHHHHHHHHHccCeEEEEEEeecCCCC---CCCCCCCceEEEEeecCCCC
Q 002151 432 EQILNLAWN----------KADIEKKVHSVIDKFAERGLRSLGVARQEVPAGT---KDSPGGPWEFIGLLPLFDPP 494 (959)
Q Consensus 432 e~il~~c~~----------~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~---~~~~e~~l~~lGli~l~D~l 494 (959)
|.|+++|+. +++.++.+.+.+++|+++|+|||++||+.++..+ ....|++|+|+|+++|-|.-
T Consensus 91 E~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~~ 166 (170)
T 3gwi_A 91 QEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDHH 166 (170)
T ss_dssp HHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC--
T ss_pred HHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhcccccc
Confidence 999999974 3456788999999999999999999999987643 23468999999999998854
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.41 E-value=1.6e-13 Score=140.71 Aligned_cols=126 Identities=21% Similarity=0.357 Sum_probs=107.3
Q ss_pred HHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHH
Q 002151 501 TIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRL 580 (959)
Q Consensus 501 aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~L 580 (959)
+++.|+++|+++.++||++...+..+++++|+.. +|... .+|.+.++.+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~-----------------------------~f~~~--~~K~~~~~~~ 102 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH-----------------------------LFQGR--EDKLVVLDKL 102 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE-----------------------------EECSC--SCHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH-----------------------------HhcCc--CChHHHHHHH
Confidence 9999999999999999999999999999999842 23322 6677777766
Q ss_pred hhC----CCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCC----chHHHHHHHHHHHHHHHHHHHHHH
Q 002151 581 QAR----KHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPG----LSVIISAVLTSRAIFQRMKNYTIY 652 (959)
Q Consensus 581 q~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~----~~~I~~ai~~gR~~~~~i~~~~~~ 652 (959)
.++ .+.|+|+||+.||.+|+++|++|++++++.+.+++.||+++.+++ +..+.+.+..+|..+++|++++.|
T Consensus 103 ~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~~ 182 (189)
T 3mn1_A 103 LAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYLE 182 (189)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTST
T ss_pred HHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHhc
Confidence 654 467999999999999999999999999999999999999998763 777888999999999999999988
Q ss_pred HHHHH
Q 002151 653 AVSIT 657 (959)
Q Consensus 653 ~l~~n 657 (959)
.+..|
T Consensus 183 ~~~~~ 187 (189)
T 3mn1_A 183 GHHHH 187 (189)
T ss_dssp TC---
T ss_pred ccccc
Confidence 87665
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.25 E-value=3.6e-12 Score=142.45 Aligned_cols=151 Identities=15% Similarity=0.150 Sum_probs=111.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCC-----CccccCccccccCCcchHHHHhhcCceee
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYP-----SSALLGEKKDTIVGLPVDDLIEKADGFAG 567 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~-----~~~l~g~~~~~~~~~~~~~~i~~~~vfar 567 (959)
+++|++.+.++.|+++|+++.|+||+....+..+.+++|+..-... ...++|.-. ....+++
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~-------------~~~~~~k 244 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVL-------------GEVVSAQ 244 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEE-------------SCCCCHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeec-------------ccccChh
Confidence 7899999999999999999999999999999999999998421000 000111000 0011223
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHHHHHHHHHHH
Q 002151 568 VFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (959)
Q Consensus 568 ~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~~~i~ 647 (959)
-.|+...++.+.++-..+.|.|+|||.||.+|+++|++|++| ++.+..++.||.++..+++..+..++.......++++
T Consensus 245 pk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~ 323 (335)
T 3n28_A 245 TKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLS 323 (335)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCC
T ss_pred hhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhc
Confidence 344555555555554556799999999999999999999999 8899999999999999999999999998888888898
Q ss_pred HHHHHHHHHH
Q 002151 648 NYTIYAVSIT 657 (959)
Q Consensus 648 ~~~~~~l~~n 657 (959)
+|+.+.+.+|
T Consensus 324 ~~~~~~~~~~ 333 (335)
T 3n28_A 324 WKSKEGHHHH 333 (335)
T ss_dssp CC--------
T ss_pred cccccccccc
Confidence 8888887655
|
| >3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* 4dx0_P* | Back alignment and structure |
|---|
Probab=99.23 E-value=2.3e-12 Score=86.63 Aligned_cols=30 Identities=53% Similarity=0.983 Sum_probs=29.5
Q ss_pred hhhhcccchhhHhHhhcCCCccccCCCccC
Q 002151 930 RELHTLKGKVESFAKLRGLDVDHVNPHYTV 959 (959)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 959 (959)
||+||||||+||++|+||+|+++||+||||
T Consensus 2 rElhTLkghvESv~KLKglDi~~i~~~yTV 31 (31)
T 3m50_P 2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31 (31)
T ss_dssp HHHHCHHHHHHHHHHHTTCCSCCCCCCCCC
T ss_pred chhhHHHHHHHHHHHHhcCChhhhhhcccC
Confidence 899999999999999999999999999997
|
| >2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} | Back alignment and structure |
|---|
Probab=99.20 E-value=6.1e-12 Score=99.16 Aligned_cols=51 Identities=57% Similarity=0.948 Sum_probs=48.4
Q ss_pred hhccccHHHHHHHHhhhHHHhhhhhcccchhhHhHhhcCCCccccCCCccC
Q 002151 909 AFKDINIMAEEARRRAEITRLRELHTLKGKVESFAKLRGLDVDHVNPHYTV 959 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 959 (959)
++++++.+++++++++|++||||+||+|||+||++|++|+|++.+++||||
T Consensus 2 s~~~~s~~ae~a~~raeiarL~~~~sl~~~~es~~kl~g~dl~~~~~~~tv 52 (52)
T 2o98_P 2 NFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52 (52)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTCCCCCCCCCCCC
T ss_pred chhHHHHHHHHhcCcceeeccccchhHHHHHHhhHhhhhhhHhhcccccCC
Confidence 456788899999999999999999999999999999999999999999997
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=4.9e-11 Score=120.93 Aligned_cols=131 Identities=21% Similarity=0.219 Sum_probs=104.8
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHH
Q 002151 495 RHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKF 574 (959)
Q Consensus 495 r~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~ 574 (959)
.++..++|++|++.|+++.++||++...+..+.+++|+.. .|.. ...|.
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~-----------------------------~~~~--~k~k~ 85 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL-----------------------------FFLG--KLEKE 85 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE-----------------------------EEES--CSCHH
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce-----------------------------eecC--CCCcH
Confidence 3467799999999999999999999999999999999852 1222 24466
Q ss_pred HHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHH----HHHHHHHHHHHHH
Q 002151 575 EIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVII----SAVLTSRAIFQRM 646 (959)
Q Consensus 575 ~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~----~ai~~gR~~~~~i 646 (959)
..++.+.++ | +.|+|+||+.||.+|++.|+++++++++.+..++.||+++.+++...+. +.+...|..|+++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~~ 165 (180)
T 1k1e_A 86 TACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSVF 165 (180)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHHH
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhhh
Confidence 666655433 4 5799999999999999999999999989999999999999877554444 4455577788899
Q ss_pred HHHHHHHHHH
Q 002151 647 KNYTIYAVSI 656 (959)
Q Consensus 647 ~~~~~~~l~~ 656 (959)
+.++.|+.+.
T Consensus 166 ~~~~~~~~~~ 175 (180)
T 1k1e_A 166 DTAQGFLKSV 175 (180)
T ss_dssp HCHHHHHHHG
T ss_pred hhccchhhhh
Confidence 8888887764
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.16 E-value=5.2e-11 Score=122.15 Aligned_cols=124 Identities=17% Similarity=0.230 Sum_probs=102.1
Q ss_pred HHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeec--ChhhHHHHHH
Q 002151 501 TIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGV--FPEHKFEIVK 578 (959)
Q Consensus 501 aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~--~Pe~K~~iV~ 578 (959)
+|+.|+++|+++.++||+....+..+.+++|+.. +|... .|+-..++.+
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~-----------------------------~~~~~kpk~~~~~~~~~ 104 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH-----------------------------YYKGQVDKRSAYQHLKK 104 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-----------------------------EECSCSSCHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-----------------------------ceeCCCChHHHHHHHHH
Confidence 3999999999999999999999999999999852 12222 4555556666
Q ss_pred HHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCC----chHHHHHHHHHHHHHHHHHHHHHHH
Q 002151 579 RLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPG----LSVIISAVLTSRAIFQRMKNYTIYA 653 (959)
Q Consensus 579 ~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~----~~~I~~ai~~gR~~~~~i~~~~~~~ 653 (959)
.++-....|+|+||+.||.+|++.|+++++++++.+..++.||+++.+++ +..+.+.+...|..|+++.++..|+
T Consensus 105 ~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~~ 183 (191)
T 3n1u_A 105 TLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLKQ 183 (191)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred HhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHhc
Confidence 66555667999999999999999999999999999999999999998877 5556677777888888887776653
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.16 E-value=8.2e-12 Score=128.55 Aligned_cols=114 Identities=18% Similarity=0.320 Sum_probs=89.4
Q ss_pred HHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHH
Q 002151 500 ETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKR 579 (959)
Q Consensus 500 eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~ 579 (959)
.+|+.|+++|+++.++||++...+..+++++|+.. +|... ..|...++.
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~-----------------------------~~~~~--k~k~~~~~~ 107 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL-----------------------------IYQGQ--DDKVQAYYD 107 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE-----------------------------EECSC--SSHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE-----------------------------EeeCC--CCcHHHHHH
Confidence 34999999999999999999999999999999852 23333 446666655
Q ss_pred HhhC----CCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCc----hHHHHHHHHHHHHHH
Q 002151 580 LQAR----KHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGL----SVIISAVLTSRAIFQ 644 (959)
Q Consensus 580 Lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~----~~I~~ai~~gR~~~~ 644 (959)
+.++ ...|+|+||+.||.+|+++|+++++|+++.+.+++.||+++..++- ..+.+.+...|..|+
T Consensus 108 ~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G~~~~~~~~il~~~~~~~ 180 (195)
T 3n07_A 108 ICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHGAVREVCDLILQARNELD 180 (195)
T ss_dssp HHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTTHHHHHHHHHHHHTTSSC
T ss_pred HHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCCHHHHHHHHHHHhcccHH
Confidence 5442 3569999999999999999999999999999999999999987653 344455544444443
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.6e-10 Score=120.38 Aligned_cols=97 Identities=24% Similarity=0.333 Sum_probs=84.6
Q ss_pred HHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHH
Q 002151 501 TIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRL 580 (959)
Q Consensus 501 aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~L 580 (959)
+++.|+++|+++.++||++...+..+++++|+.. +|..+ ..|.+.++.+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~-----------------------------~f~~~--k~K~~~l~~~ 132 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH-----------------------------LYQGQ--SDKLVAYHEL 132 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------EECSC--SSHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------hhccc--CChHHHHHHH
Confidence 9999999999999999999999999999999842 23333 5677777776
Q ss_pred hhC----CCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCC
Q 002151 581 QAR----KHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPG 628 (959)
Q Consensus 581 q~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~ 628 (959)
.++ ...|+|+||+.||.+|+++|+++++++++.+.+++.||+++.+++
T Consensus 133 ~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~ 184 (211)
T 3ij5_A 133 LATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKG 184 (211)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCT
T ss_pred HHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCC
Confidence 654 567999999999999999999999999999999999999998774
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.05 E-value=2.3e-10 Score=114.74 Aligned_cols=134 Identities=19% Similarity=0.133 Sum_probs=97.0
Q ss_pred ccCeEEEEEEeecCCCCCCCCCCCceEEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHH--HhCCCCC
Q 002151 458 RGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGR--RLGMGTN 535 (959)
Q Consensus 458 ~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~--~lGi~~~ 535 (959)
++.+.+++-....-....-....+-..++.+.++|. .+|+.|++.|+++.++||+ ..+..+++ .+|+.
T Consensus 7 ~~ikliv~D~DGtL~d~~~~~~~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-- 76 (168)
T 3ewi_A 7 KEIKLLVCNIDGCLTNGHIYVSGDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-- 76 (168)
T ss_dssp CCCCEEEEECCCCCSCSCCBCCSSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC--
T ss_pred hcCcEEEEeCccceECCcEEEcCCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE--
Confidence 467777776554211111011112256777777776 3899999999999999999 66777888 45542
Q ss_pred CCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEecC
Q 002151 536 MYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQAR----KHIVGMTGDGVNDAPALKVADIGIAVAD 611 (959)
Q Consensus 536 ~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~ 611 (959)
+|. .+++|...++.+.++ ...|+|+||+.||.+|++.|+++++|++
T Consensus 77 ----------------------------~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~n 126 (168)
T 3ewi_A 77 ----------------------------TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPAD 126 (168)
T ss_dssp ----------------------------EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTT
T ss_pred ----------------------------EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCC
Confidence 121 135688888777654 3469999999999999999999999999
Q ss_pred chHHHHhhccccccCCCchH
Q 002151 612 STDAARSASDIVLTEPGLSV 631 (959)
Q Consensus 612 gtd~Ak~aADivL~~~~~~~ 631 (959)
+.+.+++.||+|+..++=..
T Consensus 127 a~~~~k~~Ad~v~~~~~~~G 146 (168)
T 3ewi_A 127 ACSGAQKAVGYICKCSGGRG 146 (168)
T ss_dssp CCHHHHTTCSEECSSCTTTT
T ss_pred hhHHHHHhCCEEeCCCCCcc
Confidence 99999999999998765443
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.05 E-value=4.1e-10 Score=113.80 Aligned_cols=104 Identities=24% Similarity=0.322 Sum_probs=87.1
Q ss_pred HHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHH
Q 002151 501 TIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRL 580 (959)
Q Consensus 501 aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~L 580 (959)
+++.|+++|+++.++||+....+..+++++|+. +|+.. ..|.+.++.+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~------------------------------~~~~~--~~k~~~l~~~ 94 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP------------------------------VLHGI--DRKDLALKQW 94 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC------------------------------EEESC--SCHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe------------------------------eEeCC--CChHHHHHHH
Confidence 999999999999999999999999999999983 12222 5567777666
Q ss_pred hhC----CCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHH
Q 002151 581 QAR----KHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 581 q~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai 636 (959)
.++ .+.|.|+||+.||.+|++.|++|++++++.+..++.||+++.+++...++..+
T Consensus 95 ~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l 154 (176)
T 3mmz_A 95 CEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTVPGGDGAIREI 154 (176)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHH
T ss_pred HHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCCEEecCCCCCcHHHHH
Confidence 544 35699999999999999999999999999999999999999888865555444
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.00 E-value=1.1e-09 Score=115.45 Aligned_cols=146 Identities=20% Similarity=0.143 Sum_probs=104.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCC--CCc-cc--cCccc-c--cc-------------
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMY--PSS-AL--LGEKK-D--TI------------- 550 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~-~l--~g~~~-~--~~------------- 550 (959)
..+.+++.++|++|++.|++++++||++...+..+++++|+..... +.. +. .|+.. . .+
T Consensus 21 ~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~ 100 (227)
T 1l6r_A 21 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRT 100 (227)
T ss_dssp SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTS
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHh
Confidence 4578899999999999999999999999999999999999853100 000 11 11111 0 00
Q ss_pred ----------------------CCcchHHHHhh--c-----CceeecCh--hhHHHHHHHHhhC-C---CEEEEEcCCcC
Q 002151 551 ----------------------VGLPVDDLIEK--A-----DGFAGVFP--EHKFEIVKRLQAR-K---HIVGMTGDGVN 595 (959)
Q Consensus 551 ----------------------~~~~~~~~i~~--~-----~vfar~~P--e~K~~iV~~Lq~~-g---~~V~m~GDGvN 595 (959)
..+.++++.+. . ..+-.+.| .+|...++.+.+. | ..|.++||+.|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~n 180 (227)
T 1l6r_A 101 SMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNN 180 (227)
T ss_dssp SCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred cCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcHH
Confidence 00011111111 1 11223445 6899998888754 2 46899999999
Q ss_pred ChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 596 DAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 596 DapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
|.+|++.|++|++|+++.+..++.||+++.+++-..+.++++
T Consensus 181 D~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 181 DMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp GHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred hHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 999999999999999999999999999998888888877775
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=8.1e-10 Score=109.75 Aligned_cols=100 Identities=28% Similarity=0.309 Sum_probs=82.0
Q ss_pred HHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHH
Q 002151 501 TIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRL 580 (959)
Q Consensus 501 aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~L 580 (959)
+++.|++.|+++.++||++...+..+.+++|+.. .|... ..|.+.++.+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-----------------------------~~~~~--kpk~~~~~~~ 87 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY-----------------------------LFQGV--VDKLSAAEEL 87 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE-----------------------------EECSC--SCHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE-----------------------------eeccc--CChHHHHHHH
Confidence 8999999999999999999999999999999852 12222 3344444443
Q ss_pred hh----CCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchH
Q 002151 581 QA----RKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSV 631 (959)
Q Consensus 581 q~----~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~ 631 (959)
.+ ..+.|.|+||+.||.+|++.|+++++++++.+..++.||+++.+++...
T Consensus 88 ~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g 142 (164)
T 3e8m_A 88 CNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEG 142 (164)
T ss_dssp HHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTT
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCc
Confidence 33 2357999999999999999999999999999999999999999988444
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=3.7e-09 Score=104.11 Aligned_cols=140 Identities=17% Similarity=0.277 Sum_probs=94.3
Q ss_pred CCcceeeCceEEEEEEEeeecCCCCCHHHHHHHHHHhcccccCChHHHHHHHHhcCc-hhhhccce--EeEeecCCCCCc
Q 002151 334 KTGTLTLNKLTVDKILIEVVFGNGVDKDMVILTAARASRLENQDAIDAAIVSMLADP-KEARAEIT--EVHFLPFNPTDK 410 (959)
Q Consensus 334 KTGTLT~n~m~v~~~~i~~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~-~~~~~~~~--~l~~~pF~s~~k 410 (959)
..||+|-|.+.+..+. .. ++.++++++.+++.++. .+.+|++.||+.++... ........ ..++.||++..+
T Consensus 13 ~~~tit~gnr~vt~v~---~~-~g~~e~elL~lAAs~E~-~SeHPla~AIv~~A~~~~~l~~~~~~~~~~~~~~F~a~~G 87 (156)
T 1svj_A 13 SSGHGGRHNRQASEFI---PA-QGVDEKTLADAAQLASL-ADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSR 87 (156)
T ss_dssp --------CEEEEEEE---EC-TTSCHHHHHHHHHHTTS-SCCSHHHHHHHHHHHHHTTCCCCCHHHHTCEEEEEETTTT
T ss_pred CCCceecCCCeEEEEE---ec-CCCCHHHHHHHHHHHhC-cCCCHHHHHHHHHHHHhcCCCcccccccccceeeccccCC
Confidence 4799999999999875 33 47889999999888875 45679999999876432 11000110 134578988888
Q ss_pred eEEEEEEecCCeEEEEEeCCHHHHHHhhccc-hhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEee
Q 002151 411 RTALTYTDKNGKMHRASKGAPEQILNLAWNK-ADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLP 489 (959)
Q Consensus 411 r~sv~~~~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~ 489 (959)
+..+.+ +|+ .+.+|+++.|.+++... .+....+.+.+++++++|.++++||... +++|+++
T Consensus 88 ~~Gv~v---~G~--~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~-------------~l~GvIa 149 (156)
T 1svj_A 88 MSGINI---DNR--MIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIA 149 (156)
T ss_dssp EEEEEE---TTE--EEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEE
T ss_pred CCeEEE---CCE--EEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECC-------------EEEEEEE
Confidence 666643 664 56789988776665421 1223356777889999999999999764 8999999
Q ss_pred cCCCCCc
Q 002151 490 LFDPPRH 496 (959)
Q Consensus 490 l~D~lr~ 496 (959)
+.|++||
T Consensus 150 laD~iK~ 156 (156)
T 1svj_A 150 LKDIVKG 156 (156)
T ss_dssp EEECCCC
T ss_pred EecCCCC
Confidence 9999997
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.85 E-value=2.2e-10 Score=127.82 Aligned_cols=165 Identities=13% Similarity=0.112 Sum_probs=110.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccc---------------cccCC---cc
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKK---------------DTIVG---LP 554 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~---------------~~~~~---~~ 554 (959)
++++++.+.++.|++ |+.+.++|||+...+..+.+.+++.... ....+.-++. ..+.. .+
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 180 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGEL-HGTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 180 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEE-EEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhh-cccccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence 578999999999999 9999999999977777777877773211 0000000000 00000 01
Q ss_pred hHHHHhh----c--Ccee---e-cChhhHHHHHHHHhhCC--CEEEEEcCCcCChhhhhcC----CeeEEecCchHHHHh
Q 002151 555 VDDLIEK----A--DGFA---G-VFPEHKFEIVKRLQARK--HIVGMTGDGVNDAPALKVA----DIGIAVADSTDAARS 618 (959)
Q Consensus 555 ~~~~i~~----~--~vfa---r-~~Pe~K~~iV~~Lq~~g--~~V~m~GDGvNDapALk~A----dVGIamg~gtd~Ak~ 618 (959)
+ +.+.+ . ..+. - ..+.+|...++.++... +.|+++|||.||.+|++.| ++|||| ++.+.+++
T Consensus 181 l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~ 258 (332)
T 1y8a_A 181 F-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALK 258 (332)
T ss_dssp H-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHT
T ss_pred H-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHh
Confidence 1 00100 0 1111 1 12567998888776543 5699999999999999999 999999 99999999
Q ss_pred hccccccCCCchHHHHHH----HHHHHHHHHHHH-------HHHHHHHHHHHHHH
Q 002151 619 ASDIVLTEPGLSVIISAV----LTSRAIFQRMKN-------YTIYAVSITIRIVL 662 (959)
Q Consensus 619 aADivL~~~~~~~I~~ai----~~gR~~~~~i~~-------~~~~~l~~ni~~v~ 662 (959)
+||+|+.+++...+..++ ..||..+ ++-+ |+.+..+.|+..++
T Consensus 259 ~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (332)
T 1y8a_A 259 HADVVIISPTAMSEAKVIELFMERKERAF-EVLSAVSIPETEIYIMENSDFGEVL 312 (332)
T ss_dssp TCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGGGCCCTTCEEEEGGGSCHHHHH
T ss_pred hCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHHhhccCCCceEEecCCCHHHHH
Confidence 999999988887666554 5678777 6555 55555555555443
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.80 E-value=5.9e-09 Score=119.96 Aligned_cols=136 Identities=21% Similarity=0.233 Sum_probs=106.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCC-----CCccccCccccccCCcchHHHHhhcCceee
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMY-----PSSALLGEKKDTIVGLPVDDLIEKADGFAG 567 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~-----~~~~l~g~~~~~~~~~~~~~~i~~~~vfar 567 (959)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+..-.. ....++|.... .-
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~-----------------~v 318 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVG-----------------PI 318 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECS-----------------SC
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEcc-----------------CC
Confidence 789999999999999999999999999999999999999952100 00011111000 01
Q ss_pred cChhhHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHHHHHHH
Q 002151 568 VFPEHKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIF 643 (959)
Q Consensus 568 ~~Pe~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~gR~~~ 643 (959)
..++.|.++++.+.++ | +.|.|+|||.||.+|+++|++|+++ ++.+..++.||+++..+++..++.++..+|.-+
T Consensus 319 ~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~~ 397 (415)
T 3p96_A 319 IDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGEI 397 (415)
T ss_dssp CCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHHH
T ss_pred CCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHHH
Confidence 2267787777766543 3 4699999999999999999999999 677888899999999999999999998887766
Q ss_pred HHH
Q 002151 644 QRM 646 (959)
Q Consensus 644 ~~i 646 (959)
.+.
T Consensus 398 ~~~ 400 (415)
T 3p96_A 398 EAA 400 (415)
T ss_dssp HHH
T ss_pred HHh
Confidence 554
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.75 E-value=8.5e-09 Score=106.29 Aligned_cols=133 Identities=23% Similarity=0.227 Sum_probs=95.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCcee-ecCh
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFA-GVFP 570 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfa-r~~P 570 (959)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..- -..++..++ ..... .+.. -..+
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~--f~~~~~~~~-~~~~~----------~~~~~~~~~ 140 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAA--FSNTLIVEN-DALNG----------LVTGHMMFS 140 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEE--EEEEEEEET-TEEEE----------EEEESCCST
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchh--ccceeEEeC-CEEEe----------eeccCCCCC
Confidence 46889999999999999999999999999999999999998521 011110000 00000 0000 0124
Q ss_pred hhHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHH
Q 002151 571 EHKFEIVKRLQAR----KHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLT 638 (959)
Q Consensus 571 e~K~~iV~~Lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~ 638 (959)
..|.++++.+.++ ...|.|+||+.||.+|++.|+++++| ++.+..++.||+++.+++|+.+..++.+
T Consensus 141 k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~ 211 (217)
T 3m1y_A 141 HSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEG 211 (217)
T ss_dssp THHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC---
T ss_pred CChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhcc
Confidence 5566666555443 34689999999999999999999999 7788889999999999999998887764
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.65 E-value=2.6e-08 Score=110.23 Aligned_cols=131 Identities=16% Similarity=0.165 Sum_probs=95.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCce-eecChh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGF-AGVFPE 571 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vf-ar~~Pe 571 (959)
+++|++.+.++.|++.|+++.++||.....+..+.+++|+..-. ...+..++ ....+ .+. .-..++
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f--~~~l~~~d-g~~tg----------~i~~~~~~~k 245 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAF--SNTVEIRD-NVLTD----------NITLPIMNAA 245 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEE--EECEEEET-TEEEE----------EECSSCCCHH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEE--EEEEEeeC-Ceeee----------eEecccCCCC
Confidence 48899999999999999999999999999999999999985210 11110000 00000 000 011345
Q ss_pred hHHHHHHHHhh----CCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 572 HKFEIVKRLQA----RKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 572 ~K~~iV~~Lq~----~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
.|.++++.+.+ ....|.|+||+.||.+|+++|++|+++ ++.+..++.||.++..+++..+..+++
T Consensus 246 pkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 246 NKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 66666655543 235699999999999999999999999 567778889999998889998876653
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=4.8e-08 Score=99.50 Aligned_cols=105 Identities=24% Similarity=0.319 Sum_probs=82.6
Q ss_pred HHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHHH
Q 002151 501 TIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRL 580 (959)
Q Consensus 501 aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~L 580 (959)
+++.|+++|+++.++||++...+..+.+++|+.. +|... ..|.+.++.+
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~-----------------------------~~~~~--kpk~~~~~~~ 109 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH-----------------------------LYQGQ--SNKLIAFSDL 109 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------EECSC--SCSHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce-----------------------------eecCC--CCCHHHHHHH
Confidence 8999999999999999999999999999999852 12222 3344455444
Q ss_pred hhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHH-HHH
Q 002151 581 QAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVII-SAV 636 (959)
Q Consensus 581 q~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~-~ai 636 (959)
.++ | +.|+|+||+.||.+|++.|+++++++++.+..++.||+++.+++-..++ .++
T Consensus 110 ~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l 170 (188)
T 2r8e_A 110 LEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVC 170 (188)
T ss_dssp HHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHH
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHH
Confidence 332 3 5699999999999999999999999987777888999999887555544 444
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.62 E-value=1.6e-07 Score=101.41 Aligned_cols=71 Identities=23% Similarity=0.343 Sum_probs=59.2
Q ss_pred ecChh--hHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 567 GVFPE--HKFEIVKRLQAR----KHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 567 r~~Pe--~K~~iV~~Lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
...|. .|...++.+.++ ..-|+++||+.||.+|++.|++|+|||++.+..|++||+|..+++=..+..+|+
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIE 266 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHH
Confidence 34444 677777776553 235999999999999999999999999999999999999998888888887775
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.61 E-value=1e-08 Score=103.90 Aligned_cols=117 Identities=23% Similarity=0.337 Sum_probs=89.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCce--eecCh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGF--AGVFP 570 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vf--ar~~P 570 (959)
+++|++.+.++.|++.|+++.++|++....+..+ +.+|+..- .......+ .++ ....|
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~--~~~~~~~~-----------------~~~~~~~~~~ 138 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM--ANRAIFED-----------------GKFQGIRLRF 138 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE--EEEEEEET-----------------TEEEEEECCS
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh--eeeEEeeC-----------------CceECCcCCc
Confidence 7899999999999999999999999998888777 77776321 00000000 001 34566
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 571 EHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 571 e~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
.+|...++.+ ....|.|+||+.||.+|++.|++|++|+++.+ .||+++ +++..+...++
T Consensus 139 ~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~----~ad~v~--~~~~el~~~l~ 197 (201)
T 4ap9_A 139 RDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP----GADLLV--KDLKELVDFIK 197 (201)
T ss_dssp SCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT----TCSEEE--SSHHHHHHHHH
T ss_pred cCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc----cccEEE--ccHHHHHHHHH
Confidence 8899999888 45568899999999999999999999997766 899998 56777666553
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=4.6e-08 Score=99.92 Aligned_cols=128 Identities=20% Similarity=0.316 Sum_probs=88.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceee-cChh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAG-VFPE 571 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar-~~Pe 571 (959)
++.|+++++++.|++.|+++.++||+....+..+.+.+|+... ........+ .... ..+... +.+.
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~----------~~~~~~~~~~~ 142 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA-FANRLIVKD--GKLT----------GDVEGEVLKEN 142 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEE-EEEEEEEET--TEEE----------EEEECSSCSTT
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeE-EEeeeEEEC--CEEc----------CCcccCccCCc
Confidence 4668999999999999999999999998888888888887421 000000000 0000 000000 2245
Q ss_pred hHHHHHHHHhh-CC---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHH
Q 002151 572 HKFEIVKRLQA-RK---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIIS 634 (959)
Q Consensus 572 ~K~~iV~~Lq~-~g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ 634 (959)
.|.+.+..+.+ .| +.|.|+||+.||.+|++.|+++++|+ +.+..+..||+++.++++..+..
T Consensus 143 ~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 143 AKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGG
T ss_pred cHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHH
Confidence 77666665543 33 35999999999999999999999998 55667888999997766776543
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.55 E-value=1.6e-07 Score=92.81 Aligned_cols=111 Identities=18% Similarity=0.225 Sum_probs=85.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeec--Chh
Q 002151 494 PRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGV--FPE 571 (959)
Q Consensus 494 lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~--~Pe 571 (959)
..+++.++++.|++.|+++.++||.....+..+.+++|+.. .|... .|+
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-----------------------------~~~~~kp~~~ 87 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE-----------------------------IYTGSYKKLE 87 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE-----------------------------EEECC--CHH
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh-----------------------------hccCCCCCHH
Confidence 34678899999999999999999999999999999999842 12111 122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHH
Q 002151 572 HKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVII 633 (959)
Q Consensus 572 ~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~ 633 (959)
--.++.+.+.-..+.+.|+||+.||.+|.+.|+++++++++.+..++.||+++.+.+-..++
T Consensus 88 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 88 IYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHH
Confidence 22233333333345699999999999999999999999888888888999999877665555
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.55 E-value=2.2e-07 Score=100.77 Aligned_cols=67 Identities=15% Similarity=0.174 Sum_probs=57.3
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 571 EHKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 571 e~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
..|...++.+.++ | .-|+++||+.||.+|++.|++|+|||++.+..|+.||+|..+++=..+.++|+
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~ 271 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMK 271 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHH
Confidence 3577777776554 2 35899999999999999999999999999999999999998877777888776
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.50 E-value=6.6e-07 Score=91.56 Aligned_cols=129 Identities=16% Similarity=0.154 Sum_probs=94.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+..- +...+..+.+.. . ...-.-.|+.
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~-f~~~~~~~~~~~-~------------~~~~~p~p~~ 133 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTL-LCHKLEIDDSDR-V------------VGYQLRQKDP 133 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCE-EEEEEEECTTSC-E------------EEEECCSSSH
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcce-ecceeEEcCCce-E------------EeeecCCCch
Confidence 5789999999999999 99999999999999999999998531 101111111100 0 0000246899
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
|...++.+......|.|+||+.||.+|.+.|++++++....+....+.+++ .-+++..+...+.
T Consensus 134 ~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~ 197 (206)
T 1rku_A 134 KRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFP-AVHTYEDLKREFL 197 (206)
T ss_dssp HHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSC-EECSHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEECCcHHHHHHHhhhc-cccchHHHHHHHH
Confidence 999999999888899999999999999999999999865444444444554 2366888777653
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.47 E-value=1.8e-07 Score=100.99 Aligned_cols=66 Identities=23% Similarity=0.253 Sum_probs=46.5
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 572 HKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 572 ~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
.|...++.+.+. | .-|.++||+.||.+|++.|++|+|||+|.+..|++||+|..+++=..+..+|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHH
Confidence 488877776654 3 35999999999999999999999999999999999999988777777777664
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.47 E-value=1.5e-07 Score=96.29 Aligned_cols=131 Identities=12% Similarity=0.061 Sum_probs=90.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCC-CCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNM-YPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~-~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
.++|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... +......+.+. ... .......+|+
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-----~~~~~~~~~~ 150 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDG------SFK-----ELDNSNGACD 150 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTS------BEE-----EEECTTSTTT
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCC------cee-----ccCCCCCCcc
Confidence 37899999999999999999999999999999999999985311 11001110000 000 0012344567
Q ss_pred hHHHHHHHH-hhCCCEEEEEcCCcCChhhhhc--CCeeEEe--cCchHHHHhhccccccCCCchHHHHHH
Q 002151 572 HKFEIVKRL-QARKHIVGMTGDGVNDAPALKV--ADIGIAV--ADSTDAARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 572 ~K~~iV~~L-q~~g~~V~m~GDGvNDapALk~--AdVGIam--g~gtd~Ak~aADivL~~~~~~~I~~ai 636 (959)
.|.+.+..+ .-....+.|+||+.||.+|+++ +.+|+++ +++.+..+..||+++ +++..+...+
T Consensus 151 ~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~--~~~~el~~~l 218 (219)
T 3kd3_A 151 SKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVA--RNVAELASLI 218 (219)
T ss_dssp CHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEE--SSHHHHHHHH
T ss_pred cHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceee--CCHHHHHHhh
Confidence 787777665 4456789999999999999976 3355554 466677888999998 6677766543
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.44 E-value=2.5e-07 Score=96.61 Aligned_cols=128 Identities=19% Similarity=0.221 Sum_probs=93.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.++.. ....-.|+-
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~----------------~~~kp~~~~ 165 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTR--LTVIAGDDSV----------------ERGKPHPDM 165 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGT--CSEEECTTTS----------------SSCTTSSHH
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhh--eeeEEeCCCC----------------CCCCCCHHH
Confidence 5778999999999999999999999999999999999998431 1222222211 011223444
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe---eEEecCc-hHHHHh-hccccccCCCchHHHHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADI---GIAVADS-TDAARS-ASDIVLTEPGLSVIISAVLTSR 640 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdV---GIamg~g-td~Ak~-aADivL~~~~~~~I~~ai~~gR 640 (959)
-..+.+.+.-....|.|+||+.||..|+++|++ +|++|.+ .+..++ .||+++ +++..+...++.++
T Consensus 166 ~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~~ 236 (237)
T 4ex6_A 166 ALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDGH 236 (237)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC-
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHccC
Confidence 445555555455679999999999999999999 9999843 344444 799998 67999988887653
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.41 E-value=5.2e-07 Score=97.90 Aligned_cols=67 Identities=18% Similarity=0.144 Sum_probs=54.8
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccc--cccCCCchHHHHHHH
Q 002151 571 EHKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDI--VLTEPGLSVIISAVL 637 (959)
Q Consensus 571 e~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADi--vL~~~~~~~I~~ai~ 637 (959)
..|..-++.+.+. | .-|+++||+.||.+|++.|++|||||+|.+..|++||+ +..+++=..+..+|+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchHHHHHH
Confidence 3588888777653 3 35899999999999999999999999999999999995 555666667777664
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.41 E-value=3.2e-07 Score=97.85 Aligned_cols=66 Identities=23% Similarity=0.298 Sum_probs=54.9
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 572 HKFEIVKRLQAR----KHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 572 ~K~~iV~~Lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
.|..-++.+.+. ...|+++||+.||.+|++.|++|+|||++.+..|+.||+|..+++-..+..+++
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 355556665542 345899999999999999999999999999999999999998887788888775
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.40 E-value=4.5e-07 Score=98.38 Aligned_cols=66 Identities=23% Similarity=0.224 Sum_probs=57.6
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 572 HKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 572 ~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
.|..-++.+.+. | .-|+++||+.||.+|++.|++|||||+|.+..|++||+|..+++=..+..+|+
T Consensus 211 ~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 211 SKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 588888877654 3 35999999999999999999999999999999999999998888778887775
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=2.3e-07 Score=94.93 Aligned_cols=128 Identities=13% Similarity=0.117 Sum_probs=92.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..-.....++.++ . ....-.|+-
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~-~----------------~~~kp~~~~ 132 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRD-E----------------APPKPHPGG 132 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTT-T----------------SCCTTSSHH
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCC-C----------------CCCCCCHHH
Confidence 45689999999999999999999999999999999999984211001122111 0 011122333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEecCchHHHHhhccccccCCCchHHHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADI-GIAVADSTDAARSASDIVLTEPGLSVIISAVLTS 639 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdV-GIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~g 639 (959)
-..+.+.+.-....|.|+||+.||..|.+.|++ +|+|+++.+..++.||+++ +++..+...+...
T Consensus 133 ~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~--~~~~el~~~~~~~ 198 (205)
T 3m9l_A 133 LLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHA--RDCAQLRDLLSAE 198 (205)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEEC--SSHHHHHHHHHHT
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEe--CCHHHHHHHHHhc
Confidence 333444443334569999999999999999999 9999977776777899999 6788888877643
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.35 E-value=9.9e-07 Score=92.67 Aligned_cols=145 Identities=20% Similarity=0.209 Sum_probs=97.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCC--CC-cccc-Ccc-------------------ccc
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMY--PS-SALL-GEK-------------------KDT 549 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~-~~l~-g~~-------------------~~~ 549 (959)
.+.+.+.++++++++.|+++.++||.....+..+.+.+|+..... +. .+.. |+. ...
T Consensus 20 ~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~~ 99 (231)
T 1wr8_A 20 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 99 (231)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCCC
Confidence 466789999999999999999999999999999999999753100 00 0000 100 000
Q ss_pred c--------------------CCcchHHHHhhc----Cce-----eecCh--hhHHHHHHHHhhC-C---CEEEEEcCCc
Q 002151 550 I--------------------VGLPVDDLIEKA----DGF-----AGVFP--EHKFEIVKRLQAR-K---HIVGMTGDGV 594 (959)
Q Consensus 550 ~--------------------~~~~~~~~i~~~----~vf-----ar~~P--e~K~~iV~~Lq~~-g---~~V~m~GDGv 594 (959)
. ....+++++++. ++. ..+.| ..|...++.+.++ | ..|.|+||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~ 179 (231)
T 1wr8_A 100 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 179 (231)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 0 001112222221 111 22333 3688887777543 2 4589999999
Q ss_pred CChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 595 NDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 595 NDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
||.+|++.|++|++|+++.+..++.||+++.+++-..+.++++
T Consensus 180 nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 180 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEecCCCHHHHhhCCEEecCCCcchHHHHHH
Confidence 9999999999999999888888899999987666556666664
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.31 E-value=4.2e-07 Score=94.46 Aligned_cols=126 Identities=17% Similarity=0.189 Sum_probs=87.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCcc--------ccCccccccCCcchHHHHhhcCc
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSA--------LLGEKKDTIVGLPVDDLIEKADG 564 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~--------l~g~~~~~~~~~~~~~~i~~~~v 564 (959)
++.|++.++++.|++.|+++.++|+.....+..+.+++|+..+.+-... +.|.+. .
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~----------------~ 149 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDE----------------T 149 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECT----------------T
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCC----------------C
Confidence 6889999999999999999999999999999999999998531000000 011000 0
Q ss_pred eeecChhhHHHHHHHHhhC-C-CEEEEEcCCcCChhhhhcCCeeEEecCc--hHHHHhhccccccCCCchHHHHHH
Q 002151 565 FAGVFPEHKFEIVKRLQAR-K-HIVGMTGDGVNDAPALKVADIGIAVADS--TDAARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 565 far~~Pe~K~~iV~~Lq~~-g-~~V~m~GDGvNDapALk~AdVGIamg~g--td~Ak~aADivL~~~~~~~I~~ai 636 (959)
...+.+..|-++++.+.++ | ..+.|+||+.||.+|.++|+++|+++.+ .+.....+|+++ +++..+...+
T Consensus 150 ~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (225)
T 1nnl_A 150 QPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYI--TDFVELLGEL 223 (225)
T ss_dssp SGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEE--SCGGGGCC--
T ss_pred CcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeee--cCHHHHHHHH
Confidence 0111234666666665443 4 5699999999999999999999988732 234455689888 5576665443
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.28 E-value=7.6e-07 Score=95.44 Aligned_cols=66 Identities=26% Similarity=0.292 Sum_probs=56.7
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 572 HKFEIVKRLQAR----KHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 572 ~K~~iV~~Lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
.|..-++.+.++ ..-|.++||+.||.+|++.|++|+|||++.+..|++||+|..+++=..+.++++
T Consensus 200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~ 269 (274)
T 3fzq_A 200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELK 269 (274)
T ss_dssp SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHH
Confidence 477777666543 345999999999999999999999999999999999999998888788888775
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.27 E-value=2.9e-06 Score=88.39 Aligned_cols=112 Identities=17% Similarity=0.162 Sum_probs=78.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCce-eecChh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGF-AGVFPE 571 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vf-ar~~Pe 571 (959)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. .........+ .... .... ....++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~-~~~~~~~~~~--~~~~----------g~~~~~~~~~~ 158 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH-LIATDPEYRD--GRYT----------GRIEGTPSFRE 158 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE-EEECEEEEET--TEEE----------EEEESSCSSTH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE-EEEcceEEEC--CEEe----------eeecCCCCcch
Confidence 479999999999999999999999999999999999999851 0000000000 0000 0000 112356
Q ss_pred hHHHHHHHHh-hCC------CEEEEEcCCcCChhhhhcCCeeEEecCchHHHH
Q 002151 572 HKFEIVKRLQ-ARK------HIVGMTGDGVNDAPALKVADIGIAVADSTDAAR 617 (959)
Q Consensus 572 ~K~~iV~~Lq-~~g------~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak 617 (959)
.|.+.++.+. +.| ..|.|+||+.||.+|++.|++++++.......+
T Consensus 159 ~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~~l~~ 211 (232)
T 3fvv_A 159 GKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLRE 211 (232)
T ss_dssp HHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCCHHHHH
T ss_pred HHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcCHHHHH
Confidence 7877776554 345 579999999999999999999999975444433
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.27 E-value=8.7e-07 Score=97.12 Aligned_cols=67 Identities=24% Similarity=0.257 Sum_probs=57.7
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 571 EHKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 571 e~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
..|..-++.+.++ | .-|+++||+.||.+|++.|++|||||++.+..|++||+|..+++=..+..+|+
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 4688878777654 3 34999999999999999999999999999999999999998777777887775
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.24 E-value=2.9e-07 Score=104.27 Aligned_cols=116 Identities=14% Similarity=0.113 Sum_probs=77.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecCh
Q 002151 491 FDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFP 570 (959)
Q Consensus 491 ~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~P 570 (959)
-..++|++++.|+.||++|++|+++||.....+..+|+++|+..+..+..+ .|.++....+..+...+.. ...-+..
T Consensus 219 gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~V-ig~~l~~~~dG~~tg~~~~--~~p~~~~ 295 (385)
T 4gxt_A 219 GIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKV-LGLRLMKDDEGKILPKFDK--DFPISIR 295 (385)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGE-EEECEEECTTCCEEEEECT--TSCCCST
T ss_pred CceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceE-EEeEEEEecCCceeeeecC--ccceeCC
Confidence 345789999999999999999999999999999999999997544322222 3333221111000000000 0011346
Q ss_pred hhHHHHHHHHhhC--C-CEEEEEcCCcCChhhhhc-CCeeEEe
Q 002151 571 EHKFEIVKRLQAR--K-HIVGMTGDGVNDAPALKV-ADIGIAV 609 (959)
Q Consensus 571 e~K~~iV~~Lq~~--g-~~V~m~GDGvNDapALk~-AdVGIam 609 (959)
+.|.+.|+.+-+. | ..+.++|||.||.|||++ +|.|+++
T Consensus 296 ~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 296 EGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp HHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred CchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 7899999887432 2 247788999999999986 6666555
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.20 E-value=1.2e-06 Score=90.38 Aligned_cols=127 Identities=9% Similarity=0.062 Sum_probs=89.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.++... ...-.|+
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~kp~~~ 146 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFY--FDAIVGSSLDG----------------KLSTKED 146 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGG--CSEEEEECTTS----------------SSCSHHH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhh--eeeeeccCCCC----------------CCCCCHH
Confidence 36789999999999999999999999999989999999998521 11222211100 0111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe---eEEecCchH--HHHhhccccccCCCchHHHHHHHH
Q 002151 572 HKFEIVKRLQARKHIVGMTGDGVNDAPALKVADI---GIAVADSTD--AARSASDIVLTEPGLSVIISAVLT 638 (959)
Q Consensus 572 ~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdV---GIamg~gtd--~Ak~aADivL~~~~~~~I~~ai~~ 638 (959)
--..+.+.+.-....|.|+||+.||..|.+.|++ +|++|.+.. ..+..||+++ +++..+...+..
T Consensus 147 ~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~s~~el~~~~~~ 216 (226)
T 3mc1_A 147 VIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIV--NSVDELHKKILE 216 (226)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEE--SSHHHHHHHHHT
T ss_pred HHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEE--CCHHHHHHHHHH
Confidence 2333444444344579999999999999999999 888885443 3357899999 678888887753
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.17 E-value=3e-06 Score=90.21 Aligned_cols=127 Identities=13% Similarity=0.154 Sum_probs=87.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.+++.+.++.|++.|+++.++|++.......+.+.+|+... ....++.++... ...-.|+-
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~----------------~~kp~~~~ 165 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGY-KPDFLVTPDDVP----------------AGRPYPWM 165 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTC-CCSCCBCGGGSS----------------CCTTSSHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCccc-ChHheecCCccC----------------CCCCCHHH
Confidence 4679999999999999999999999998888888888876421 112222221110 11123444
Q ss_pred HHHHHHHHhhCC-CEEEEEcCCcCChhhhhcCC---eeEEecCc------------------------hHHHHhh-cccc
Q 002151 573 KFEIVKRLQARK-HIVGMTGDGVNDAPALKVAD---IGIAVADS------------------------TDAARSA-SDIV 623 (959)
Q Consensus 573 K~~iV~~Lq~~g-~~V~m~GDGvNDapALk~Ad---VGIamg~g------------------------td~Ak~a-ADiv 623 (959)
-..+.+.+.-.. ..|.|+||+.||.+|++.|+ |++++|.+ .+..+++ ||++
T Consensus 166 ~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 245 (267)
T 1swv_A 166 CYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFT 245 (267)
T ss_dssp HHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCcee
Confidence 445556655444 57999999999999999999 67777754 2333444 9999
Q ss_pred ccCCCchHHHHHHHH
Q 002151 624 LTEPGLSVIISAVLT 638 (959)
Q Consensus 624 L~~~~~~~I~~ai~~ 638 (959)
+ +++..+...+..
T Consensus 246 ~--~~~~el~~~l~~ 258 (267)
T 1swv_A 246 I--ETMQELESVMEH 258 (267)
T ss_dssp E--SSGGGHHHHHHH
T ss_pred c--cCHHHHHHHHHH
Confidence 8 668888777643
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.14 E-value=5.5e-06 Score=89.72 Aligned_cols=66 Identities=21% Similarity=0.209 Sum_probs=56.5
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 572 HKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 572 ~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
.|...++.+.+. | ..|.++||+.||.+|++.|++|++|+++.+..++.||+++.+++-..+..+++
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 788888877653 2 45899999999999999999999999998889999999998777777777765
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.13 E-value=2.4e-06 Score=87.78 Aligned_cols=122 Identities=16% Similarity=0.161 Sum_probs=84.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.+++.+.++.+++.|+++.++|+........+.+.+|+... -..++.++... ...-.|+-
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~----------------~~kp~~~~ 155 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS--FDALASAEKLP----------------YSKPHPQV 155 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEECTTSS----------------CCTTSTHH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhh--CcEEEeccccC----------------CCCCChHH
Confidence 4678999999999999999999999998888888888887421 11222211100 01112333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEe----cCchHHHHhhccccccCCCchHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAV----ADSTDAARSASDIVLTEPGLSVIIS 634 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIam----g~gtd~Ak~aADivL~~~~~~~I~~ 634 (959)
-..+.+.+.-....|.++||+.||.+|++.|++++++ +++.+..+..||+++ +++..+..
T Consensus 156 ~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~--~~~~el~~ 219 (226)
T 1te2_A 156 YLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKL--SSLTELTA 219 (226)
T ss_dssp HHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEEC--SCGGGCCH
T ss_pred HHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEE--CCHHHHhH
Confidence 3445555554445689999999999999999999998 444444577899988 45655544
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.12 E-value=2.5e-06 Score=88.28 Aligned_cols=126 Identities=11% Similarity=0.059 Sum_probs=87.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.+++.. ...-.|+-
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~kp~~~~ 152 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDIN--KINIVTRDDVS----------------YGKPDPDL 152 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTT--SSCEECGGGSS----------------CCTTSTHH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhh--hheeeccccCC----------------CCCCChHH
Confidence 4678999999999999999999999999999999999988532 12222221110 11112222
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe---eEEec-CchHHHHhh-ccccccCCCchHHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADI---GIAVA-DSTDAARSA-SDIVLTEPGLSVIISAVLT 638 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdV---GIamg-~gtd~Ak~a-ADivL~~~~~~~I~~ai~~ 638 (959)
-..+.+.+.-....|.|+||+.||..|++.|++ +|++| +..+..++. ||+++ +++..+...++.
T Consensus 153 ~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~--~~~~el~~~l~~ 221 (233)
T 3s6j_A 153 FLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY--EDPLDLLNHLDE 221 (233)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE--SSHHHHHHTGGG
T ss_pred HHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE--CCHHHHHHHHHH
Confidence 223333333233569999999999999999999 66666 444444544 99998 678888887754
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.05 E-value=3.8e-06 Score=88.21 Aligned_cols=137 Identities=13% Similarity=0.053 Sum_probs=91.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhh--cCceeecCh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEK--ADGFAGVFP 570 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~--~~vfar~~P 570 (959)
++.|++.+.++.|+++|+++.++|+.....+..+.+ |+.. + ..++.++.... +..+.....+ ...+-+-..
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~--~-~~v~~~~~~~~--~~~~~~~~~kp~p~~~~~~~~ 149 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVE--K-DRIYCNHASFD--NDYIHIDWPHSCKGTCSNQCG 149 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSC--G-GGEEEEEEECS--SSBCEEECTTCCCTTCCSCCS
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCC--C-CeEEeeeeEEc--CCceEEecCCCCccccccccC
Confidence 688999999999999999999999999888888777 7632 1 22332221100 0000000000 011111135
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhh--ccccccCCCchHHHHHHHH
Q 002151 571 EHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSA--SDIVLTEPGLSVIISAVLT 638 (959)
Q Consensus 571 e~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~a--ADivL~~~~~~~I~~ai~~ 638 (959)
.+|.++++.+......+.|+||+.||.+|.++|++.++.....+..++. +|+++ +++..+...+..
T Consensus 150 ~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~ 217 (236)
T 2fea_A 150 CCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPY--QDFYEIRKEIEN 217 (236)
T ss_dssp SCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECC--SSHHHHHHHHHT
T ss_pred CcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeec--CCHHHHHHHHHH
Confidence 6798999999877789999999999999999999998753222333333 78877 678888877653
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.04 E-value=2.1e-06 Score=90.65 Aligned_cols=123 Identities=15% Similarity=0.133 Sum_probs=85.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
.++.|++.+.++.|++.|+++.++|+.....+..+.+++|+... -..++.+++.. ...-.|+
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~--f~~~~~~~~~~----------------~~Kp~~~ 174 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHL--FSEMLGGQSLP----------------EIKPHPA 174 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG--CSEEECTTTSS----------------SCTTSSH
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchhe--EEEEEecccCC----------------CCCcCHH
Confidence 35779999999999999999999999999999999999998521 11222221110 0111244
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE-ecC----chHHHHhhccccccCCCchHHHH
Q 002151 572 HKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIA-VAD----STDAARSASDIVLTEPGLSVIIS 634 (959)
Q Consensus 572 ~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIa-mg~----gtd~Ak~aADivL~~~~~~~I~~ 634 (959)
--.++.+.+.-....|.|+||+.||.+|.+.|++++. +.. +.+..+..+|+++ +++..+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi--~~~~el~~ 240 (243)
T 2hsz_A 175 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILK 240 (243)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGG
T ss_pred HHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEE--CCHHHHHH
Confidence 4445555555445679999999999999999998844 432 2344566789988 55665543
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.01 E-value=3.6e-06 Score=87.98 Aligned_cols=124 Identities=13% Similarity=0.035 Sum_probs=85.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.++... ...-.|+-
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~kp~~~~ 171 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRY--FKYIAGSNLDG----------------TRVNKNEV 171 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGG--CSEEEEECTTS----------------CCCCHHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhh--EEEEEeccccC----------------CCCCCHHH
Confidence 5789999999999999999999999999999999999998521 11222211110 01111222
Q ss_pred HHHHHHHHhhC-CCEEEEEcCCcCChhhhhcCCe---eEEecCchH--HHHhhccccccCCCchHHHHHH
Q 002151 573 KFEIVKRLQAR-KHIVGMTGDGVNDAPALKVADI---GIAVADSTD--AARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 573 K~~iV~~Lq~~-g~~V~m~GDGvNDapALk~AdV---GIamg~gtd--~Ak~aADivL~~~~~~~I~~ai 636 (959)
-..+.+.+.-. ...|.++||+.||..|.+.|++ ++++|.+.. ..+..+|+++ +++..+...+
T Consensus 172 ~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l 239 (240)
T 3sd7_A 172 IQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIV--ENVESIKDIL 239 (240)
T ss_dssp HHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEE--SSSTTHHHHH
T ss_pred HHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEE--CCHHHHHHHh
Confidence 23344444444 5568999999999999999999 777774433 3357899998 5677776654
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.00 E-value=4.6e-06 Score=85.48 Aligned_cols=113 Identities=5% Similarity=-0.057 Sum_probs=77.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.+++.+.++.+++.|+++.++|++ ..+..+.+.+|+... -..++.+++.. ...-.|+-
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~Kp~~~~ 150 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGY--FDAIADPAEVA----------------ASKPAPDI 150 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGG--CSEECCTTTSS----------------SCTTSSHH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHH--cceEeccccCC----------------CCCCChHH
Confidence 46799999999999999999999998 345566677787421 11222221110 11112323
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccC
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTE 626 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~ 626 (959)
-..+.+.+.-....|.++||+.||.+|++.|+++++|.++.+..+ .||+++.+
T Consensus 151 ~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~ 203 (221)
T 2wf7_A 151 FIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPD 203 (221)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESS
T ss_pred HHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcC
Confidence 333444444334568999999999999999999999997777777 89998844
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.00 E-value=4.2e-06 Score=84.33 Aligned_cols=119 Identities=16% Similarity=0.074 Sum_probs=82.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++.|+++.++|++...... ..+.+|+... -..++.+++. ....-.|+-
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~--f~~~~~~~~~----------------~~~Kp~~~~ 145 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESY--FTEILTSQSG----------------FVRKPSPEA 145 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGG--EEEEECGGGC----------------CCCTTSSHH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhh--eeeEEecCcC----------------CCCCCCcHH
Confidence 46799999999999999999999999988887 7788887421 0111111110 001112333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEecCchHHHHhhccccccCCCchHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG-IAVADSTDAARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~gtd~Ak~aADivL~~~~~~~I~~ai 636 (959)
-.++.+.++-....|.++||+.||.+|++.|+++ |+|++|. . .||+++ +++..+...+
T Consensus 146 ~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~---~a~~v~--~~~~el~~~l 204 (207)
T 2go7_A 146 ATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y---EGNHRI--QALADISRIF 204 (207)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C---TTEEEC--SSTTHHHHHT
T ss_pred HHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C---CCCEEe--CCHHHHHHHH
Confidence 3455555554445689999999999999999997 8888665 2 689888 5577666544
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.98 E-value=3.4e-06 Score=86.54 Aligned_cols=123 Identities=18% Similarity=0.093 Sum_probs=78.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhH
Q 002151 494 PRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHK 573 (959)
Q Consensus 494 lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K 573 (959)
+.+++.+.++.+++.|+++.++|+..........+.+|+... -..++.++... ...-.|+--
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----------------~~k~~~~~~ 151 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDW--FDIIIGGEDVT----------------HHKPDPEGL 151 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTC--CSEEECGGGCS----------------SCTTSTHHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhh--eeeeeehhhcC----------------CCCCChHHH
Confidence 468999999999999999999999998888888888887421 11222111100 001112222
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEe----cCchHHHHhh-ccccccCCCchHHHHHH
Q 002151 574 FEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAV----ADSTDAARSA-SDIVLTEPGLSVIISAV 636 (959)
Q Consensus 574 ~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIam----g~gtd~Ak~a-ADivL~~~~~~~I~~ai 636 (959)
..+.+.+.-....|.++||+.||.+|++.|++++++ +++.+..+.. ||+++ +++..+...+
T Consensus 152 ~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~--~~~~el~~~l 217 (225)
T 3d6j_A 152 LLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRII--STLGQLISVP 217 (225)
T ss_dssp HHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEE--SSGGGGC---
T ss_pred HHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEE--CCHHHHHHhh
Confidence 233343333334588999999999999999998887 3333333444 89888 4566655554
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.96 E-value=6.5e-06 Score=85.45 Aligned_cols=124 Identities=15% Similarity=0.076 Sum_probs=87.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.++++.|++.|+++.++|+.....+..+.+++|+... -..++.+++. ....-.|+-
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~--f~~i~~~~~~----------------~~~Kp~~~~ 144 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGY--FDLIVGGDTF----------------GEKKPSPTP 144 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG--CSEEECTTSS----------------CTTCCTTHH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHH--heEEEecCcC----------------CCCCCChHH
Confidence 5789999999999999999999999999888999999997421 1122222211 012223444
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEecCc--hHHHHhhccccccCCCchHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG-IAVADS--TDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~g--td~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
-..+.+.+.-....|.|+||+.||.+|.++|++. |++..| .... ..+|+++ +++..+...+.
T Consensus 145 ~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~--~~~~el~~~l~ 209 (222)
T 2nyv_A 145 VLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTL--SRPSDLVKLMD 209 (222)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEE--CCHHHHHHHHH
Confidence 4555666654455799999999999999999988 666432 2112 5688888 66888877664
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.96 E-value=4.1e-06 Score=86.86 Aligned_cols=126 Identities=9% Similarity=0.031 Sum_probs=91.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.+++. ....-.|+-
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~----------------~~~kp~~~~ 160 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGL--FDHVLSVDAV----------------RLYKTAPAA 160 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTT--CSEEEEGGGT----------------TCCTTSHHH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhh--cCEEEEeccc----------------CCCCcCHHH
Confidence 5678999999999999999999999999888888888888532 1122222111 011222333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEe----cCchHHHHhhccccccCCCchHHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAV----ADSTDAARSASDIVLTEPGLSVIISAVLT 638 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIam----g~gtd~Ak~aADivL~~~~~~~I~~ai~~ 638 (959)
-..+.+.+.-....|.|+||+.||..|.+.|++++++ +++.+..+..+|+++ +++..+...+..
T Consensus 161 ~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~--~~~~el~~~l~~ 228 (233)
T 3umb_A 161 YALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAG--HDMRDLLQFVQA 228 (233)
T ss_dssp HTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEE--SSHHHHHHHHHC
T ss_pred HHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEE--CCHHHHHHHHHH
Confidence 3445555554445699999999999999999999999 444444466799999 678888887764
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.95 E-value=5e-06 Score=88.94 Aligned_cols=67 Identities=27% Similarity=0.345 Sum_probs=58.4
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 571 EHKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 571 e~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
-.|..-++.+.++ | ..|+++||+.||.+|++.|++|+|||++.+..|++||+|..+++=..+.++++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 263 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALK 263 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHH
Confidence 4688888777654 3 35899999999999999999999999999999999999998888888888775
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.95 E-value=1.6e-05 Score=82.49 Aligned_cols=117 Identities=10% Similarity=0.027 Sum_probs=75.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+... -..++.+++. ....-.|+-
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~--f~~i~~~~~~----------------~~~Kp~~~~ 151 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDD--FHAIVDPTTL----------------AKGKPDPDI 151 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTT--CSEECCC-------------------------CCH
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhh--cCEEeeHhhC----------------CCCCCChHH
Confidence 3789999999999999999999999755 6777788887532 1122222110 001112222
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVI 632 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I 632 (959)
=..+.+.+.-....|.|+||+.||..|.+.|+++++|.++.+..+ .||+++. ++..+
T Consensus 152 ~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~--s~~el 208 (233)
T 3nas_A 152 FLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVR--QTSDL 208 (233)
T ss_dssp HHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC--------CSEECS--SGGGC
T ss_pred HHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeC--ChHhC
Confidence 244555555445679999999999999999999999986666555 8999984 44443
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.94 E-value=1.7e-05 Score=82.10 Aligned_cols=124 Identities=18% Similarity=0.118 Sum_probs=88.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++. +++.++|+........+.+.+|+... -..++.+++. ....-.|+-
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~--f~~~~~~~~~----------------~~~kp~~~~ 160 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDL--FDSITTSEEA----------------GFFKPHPRI 160 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEHHHH----------------TBCTTSHHH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHH--cceeEecccc----------------CCCCcCHHH
Confidence 5679999999999999 99999999999988888899888421 1111111100 011122333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCC---eeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGV-NDAPALKVAD---IGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGv-NDapALk~Ad---VGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
-..+.+.+.-....|.|+||+. ||..|.+.|+ +++++|++.+..++.+|+++ +++..+...+.
T Consensus 161 ~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~--~~~~el~~~l~ 227 (234)
T 3u26_A 161 FELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (234)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEE--SSTHHHHHHHH
T ss_pred HHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEee--CCHHHHHHHHH
Confidence 3444555544446799999997 9999999999 67777876666677899998 66888877764
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.93 E-value=6.5e-06 Score=89.26 Aligned_cols=131 Identities=15% Similarity=0.169 Sum_probs=88.0
Q ss_pred CCCcchHHHHHHHHhC-CCeEEEEcCC---------------------CcHHHHHHHHHhCCCCCCCCCccccCcccccc
Q 002151 493 PPRHDSAETIRRALDL-GVSVKMITGD---------------------QLAIGKETGRRLGMGTNMYPSSALLGEKKDTI 550 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~a-GI~v~miTGD---------------------~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~ 550 (959)
.+++++.+.++.+++. |+++...|.+ ....+..+.+..|+...........+..
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~---- 197 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDP---- 197 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCC----
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCC----
Confidence 4678999999999988 9998888876 2334444555555521100000000000
Q ss_pred CCcchHHHHhhcCceeecCh--hhHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccc
Q 002151 551 VGLPVDDLIEKADGFAGVFP--EHKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVL 624 (959)
Q Consensus 551 ~~~~~~~~i~~~~vfar~~P--e~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL 624 (959)
....+....| ..|...++.+.++ | ..|+|+||+.||.+|++.|++|++|+++.+..++.||+++
T Consensus 198 ----------~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v~ 267 (289)
T 3gyg_A 198 ----------EDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLIT 267 (289)
T ss_dssp ----------TTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCBC
T ss_pred ----------CCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEEc
Confidence 0012333333 3566666665543 3 4589999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHH
Q 002151 625 TEPGLSVIISAVL 637 (959)
Q Consensus 625 ~~~~~~~I~~ai~ 637 (959)
.+++-..+.++++
T Consensus 268 ~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 268 DSEYSKGITNTLK 280 (289)
T ss_dssp SSCHHHHHHHHHH
T ss_pred CCCCcCHHHHHHH
Confidence 8777777777765
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.93 E-value=5.2e-06 Score=85.76 Aligned_cols=125 Identities=11% Similarity=0.069 Sum_probs=87.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
-++.|++.+.++.|++.|+++.++|+........+.+.+|+... -..++.+++. ....-.|+
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~----------------~~~kp~~~ 156 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNS--FDHLISVDEV----------------RLFKPHQK 156 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGG--CSEEEEGGGT----------------TCCTTCHH
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhh--cceeEehhhc----------------ccCCCChH
Confidence 35789999999999999999999999999988898899998521 1122221110 01112233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEe----cCchHHHHhhccccccCCCchHHHHHH
Q 002151 572 HKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAV----ADSTDAARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 572 ~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIam----g~gtd~Ak~aADivL~~~~~~~I~~ai 636 (959)
--..+.+.+.-....|.|+||+.||..|.++|++++++ +++.+..+..+|+++ +++..+...+
T Consensus 157 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (230)
T 3um9_A 157 VYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVV--SDVGVLASRF 223 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEE--SSHHHHHHTC
T ss_pred HHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEe--CCHHHHHHHH
Confidence 33444555544445699999999999999999999998 334444456789988 6677776654
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.92 E-value=1.8e-05 Score=84.26 Aligned_cols=127 Identities=11% Similarity=0.089 Sum_probs=87.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...++.++... ...-.|+-
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~----------------~~kp~~~~ 173 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYT-PASTVFATDVV----------------RGRPFPDM 173 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCC-CSEEECGGGSS----------------SCTTSSHH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCC-CceEecHHhcC----------------CCCCCHHH
Confidence 57789999999999999999999999998888888888874320 12222221100 01112333
Q ss_pred HHHHHHHHhhCC-CEEEEEcCCcCChhhhhcCC---eeEEecCc------------------------hHHHH-hhcccc
Q 002151 573 KFEIVKRLQARK-HIVGMTGDGVNDAPALKVAD---IGIAVADS------------------------TDAAR-SASDIV 623 (959)
Q Consensus 573 K~~iV~~Lq~~g-~~V~m~GDGvNDapALk~Ad---VGIamg~g------------------------td~Ak-~aADiv 623 (959)
=..+.+.+.-.. ..|.|+||+.||..|.+.|+ |+|++|.+ .+..+ ..+|++
T Consensus 174 ~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v 253 (277)
T 3iru_A 174 ALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYV 253 (277)
T ss_dssp HHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEE
Confidence 334455555455 67999999999999999999 56666632 23333 349999
Q ss_pred ccCCCchHHHHHHHH
Q 002151 624 LTEPGLSVIISAVLT 638 (959)
Q Consensus 624 L~~~~~~~I~~ai~~ 638 (959)
+ +++..+...+..
T Consensus 254 ~--~~~~el~~~l~~ 266 (277)
T 3iru_A 254 I--DSVADLETVITD 266 (277)
T ss_dssp E--SSGGGTHHHHHH
T ss_pred e--cCHHHHHHHHHH
Confidence 9 678888877753
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.91 E-value=1.3e-05 Score=84.06 Aligned_cols=126 Identities=13% Similarity=0.065 Sum_probs=83.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++.|+++.++|+.....+...-+. |+........++.+++.. ...-.|+-
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~----------------~~kp~~~~ 171 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVK----------------YGKPNPEP 171 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCS----------------SCTTSSHH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCC----------------CCCCChHH
Confidence 5779999999999999999999999988777776666 775321002233322110 11122333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEecCch----HHHHhhccccccCCCchHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG-IAVADST----DAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~gt----d~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
-..+.+.+.-....|.|+||+.||..|.++|+++ |.+..|. +..+..||+++ +++..+...+.
T Consensus 172 ~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~s~~el~~~l~ 239 (243)
T 3qxg_A 172 YLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLF--PSMQTLCDSWD 239 (243)
T ss_dssp HHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEE--SCHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 3334444433345699999999999999999984 4555432 22334699998 67888877664
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.91 E-value=1.3e-05 Score=83.11 Aligned_cols=122 Identities=10% Similarity=0.052 Sum_probs=84.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.+++. ....-.|+-
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~--f~~i~~~~~~----------------~~~Kp~~~~ 164 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHY--FDSIIGSGDT----------------GTIKPSPEP 164 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGG--CSEEEEETSS----------------SCCTTSSHH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhh--eeeEEccccc----------------CCCCCChHH
Confidence 4789999999999999999999999999999999999998521 1122222111 011122333
Q ss_pred HHHHHHHHhhCCC-EEEEEcCCcCChhhhhcCCe-eEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 573 KFEIVKRLQARKH-IVGMTGDGVNDAPALKVADI-GIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 573 K~~iV~~Lq~~g~-~V~m~GDGvNDapALk~AdV-GIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
-..+.+.+.-... .|.|+||+.||..|.++|++ +|.++++.+ ..+|+++ +++..+...+.
T Consensus 165 ~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~---~~~~~~~--~~~~el~~~l~ 226 (231)
T 3kzx_A 165 VLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI---IKDILSF--KNFYDIRNFIC 226 (231)
T ss_dssp HHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC--------CCEEE--SSHHHHHHHHH
T ss_pred HHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC---CCCceee--CCHHHHHHHHH
Confidence 3455555554444 69999999999999999997 777776554 3577777 66888777664
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.90 E-value=1.4e-05 Score=83.47 Aligned_cols=127 Identities=10% Similarity=0.015 Sum_probs=81.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
.++.|++.+.++.|++.|+++.++|+..........+. |+.....+..++.+++. ....-.|+
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~----------------~~~kp~~~ 169 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDV----------------KYGKPNPE 169 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGC----------------SSCTTSSH
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccC----------------CCCCCCCH
Confidence 36789999999999999999999999887777766666 77532100222222211 01122233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEecCc--h--HHHHhhccccccCCCchHHHHHHH
Q 002151 572 HKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG-IAVADS--T--DAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 572 ~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~g--t--d~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
--..+.+.+.-....|.|+||+.||..|.++|+++ |.+..| . +..+..||+++ +++..+...+.
T Consensus 170 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~ 238 (247)
T 3dv9_A 170 PYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLF--HSMPDFNKNWE 238 (247)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 33445555554445699999999999999999965 444432 2 22234799998 66888777665
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.89 E-value=1.6e-05 Score=82.19 Aligned_cols=121 Identities=12% Similarity=0.115 Sum_probs=78.9
Q ss_pred CCCcchHHHHHHHHhC-CCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 493 PPRHDSAETIRRALDL-GVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~a-GI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
++.|++.+.++.|++. |+++.++|+.....+..+.+.+|+... . ...+.+.+. .. .|.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~-f-~~~~~~~~~-----------------~~--~~k 151 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHY-F-PFGAFADDA-----------------LD--RNE 151 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTT-C-SCEECTTTC-----------------SS--GGG
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhh-c-CcceecCCC-----------------cC--ccc
Confidence 4679999999999999 999999999999888888888888532 1 112222111 01 111
Q ss_pred hHHH----HHHHHh--hCCCEEEEEcCCcCChhhhhcCC---eeEEecCchHHHHh--hccccccCCCchHHHHHH
Q 002151 572 HKFE----IVKRLQ--ARKHIVGMTGDGVNDAPALKVAD---IGIAVADSTDAARS--ASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 572 ~K~~----iV~~Lq--~~g~~V~m~GDGvNDapALk~Ad---VGIamg~gtd~Ak~--aADivL~~~~~~~I~~ai 636 (959)
-+.+ +.+.+. -....|.|+||+.||.+|.+.|+ |+++.|.+...... .+|+++ +++..+...+
T Consensus 152 ~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~--~~~~el~~~l 225 (234)
T 2hcf_A 152 LPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVL 225 (234)
T ss_dssp HHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHH
T ss_pred hHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEe--CCHHhHHHHH
Confidence 1222 233333 12346899999999999999999 55555543333332 289888 4455565554
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=8.3e-05 Score=75.19 Aligned_cols=134 Identities=14% Similarity=0.223 Sum_probs=82.0
Q ss_pred cceeeCceEEEEEEEeeecC--CCCCHHHHHHHHHHhcccccCChHHHHHHHHhcCc-hhh-hccceEeEeecCCCCCce
Q 002151 336 GTLTLNKLTVDKILIEVVFG--NGVDKDMVILTAARASRLENQDAIDAAIVSMLADP-KEA-RAEITEVHFLPFNPTDKR 411 (959)
Q Consensus 336 GTLT~n~m~v~~~~i~~~~~--~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~-~~~-~~~~~~l~~~pF~s~~kr 411 (959)
||||+|+++|.++. .+. .+.+.++++.+++.++... .||+..||++++... ... .......+..| .+-
T Consensus 1 GTLT~G~p~V~~v~---~~~~~~~~~~~~lL~laaa~E~~S-eHPlA~AIv~~a~~~~~~~~~~~~~~f~~i~----G~G 72 (185)
T 2kmv_A 1 SFTMHGTPVVNQVK---VLTESNRISHHKILAIVGTAESNS-EHPLGTAITKYCKQELDTETLGTCIDFQVVP----GCG 72 (185)
T ss_dssp CCCCSCCCEEEEEE---ECSCTTTSCHHHHHHHHHHGGGSS-SCHHHHHHHHHHHHHHTCSCCCCCBCCEEET----TTE
T ss_pred CCCcCCcEEEEEEE---ecCCcCCCCHHHHHHHHHHHHccC-CCHHHHHHHHHHHhhcCCCCCCCccceEEec----cce
Confidence 89999999999875 332 2457788888888776654 569999999876321 000 00111112222 112
Q ss_pred EEEEEEecC-----------------------------------------------CeEEEEEeCCHHHHHHhhccchhH
Q 002151 412 TALTYTDKN-----------------------------------------------GKMHRASKGAPEQILNLAWNKADI 444 (959)
Q Consensus 412 ~sv~~~~~~-----------------------------------------------g~~~~~~KGa~e~il~~c~~~~~~ 444 (959)
....+...+ .+...+..|+++.+.+..- .+
T Consensus 73 v~~~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi---~i 149 (185)
T 2kmv_A 73 ISCKVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGL---VI 149 (185)
T ss_dssp EEEEECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHTC---CC
T ss_pred EEEEECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcCC---CC
Confidence 222221100 0114567799998765321 11
Q ss_pred HHHHHHHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeecCCC
Q 002151 445 EKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDP 493 (959)
Q Consensus 445 ~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l~D~ 493 (959)
.+.+...++++..+|..++.+|... +++|++++.|+
T Consensus 150 ~~~~~~~~~~~~~~G~T~V~vaidg-------------~l~g~iavaD~ 185 (185)
T 2kmv_A 150 NNDVNDFMTEHERKGRTAVLVAVDD-------------ELCGLIAIADT 185 (185)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEECC
T ss_pred CHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEEEcC
Confidence 2234455667888999999999875 89999999995
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.86 E-value=1.4e-05 Score=82.50 Aligned_cols=124 Identities=8% Similarity=0.036 Sum_probs=81.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC---cHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecCh
Q 002151 494 PRHDSAETIRRALDLGVSVKMITGDQ---LAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFP 570 (959)
Q Consensus 494 lr~~v~eaI~~l~~aGI~v~miTGD~---~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~P 570 (959)
+.+++.+.++.|++.|+++.++|+.. ........+.+|+... -..++.+++. ....-.|
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~----------------~~~kp~~ 161 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEF--IDKTFFADEV----------------LSYKPRK 161 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGG--CSEEEEHHHH----------------TCCTTCH
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHH--hhhheecccc----------------CCCCCCH
Confidence 57999999999999999999999999 8888888888887421 1111211100 0011122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCeeEEe---cCchHHHHhhccccccCCCchHHHHHHH
Q 002151 571 EHKFEIVKRLQARKHIVGMTGDGV-NDAPALKVADIGIAV---ADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 571 e~K~~iV~~Lq~~g~~V~m~GDGv-NDapALk~AdVGIam---g~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
+--..+.+.+.-....|.++||+. ||..|++.|++++++ +++.+..+..+|+++ +++..+...+.
T Consensus 162 ~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 230 (235)
T 2om6_A 162 EMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEI--PSIANLKDVIE 230 (235)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEE--SSGGGHHHHHH
T ss_pred HHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchH--hhHHHHHHHHH
Confidence 222233333332335699999999 999999999999998 322222234578877 56777776653
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.85 E-value=6.2e-06 Score=83.68 Aligned_cols=121 Identities=16% Similarity=0.071 Sum_probs=84.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.+++. ....-.|+-
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~----------------~~~kp~~~~ 150 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGF--FDIVLSGEEF----------------KESKPNPEI 150 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEGGGC----------------SSCTTSSHH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhh--eeeEeecccc----------------cCCCCChHH
Confidence 4789999999999999999999999999999999999998531 1122222111 011122333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEec-C-chHHHHhhccccccCCCchHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVA-D-STDAARSASDIVLTEPGLSVII 633 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~-gtd~Ak~aADivL~~~~~~~I~ 633 (959)
-..+.+.+.-....|.++||+.||..|.+.|++++.+. . +....+..+|+++ +++..+.
T Consensus 151 ~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~--~~~~el~ 211 (214)
T 3e58_A 151 YLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLL--DSLTDVL 211 (214)
T ss_dssp HHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEE--SSGGGGG
T ss_pred HHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHH--HHHHHHH
Confidence 34455555544456999999999999999999988875 2 2333446789888 5566554
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.82 E-value=1.5e-05 Score=84.41 Aligned_cols=127 Identities=15% Similarity=0.044 Sum_probs=85.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCc-cccCccccccCCcchHHHHhhcCceeecChh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSS-ALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~-~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..- -.. ++.+++.. ....-.|+
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~i~~~~~~~---------------~~~Kp~~~ 172 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTEL--AGEHIYDPSWVG---------------GRGKPHPD 172 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHH--HCSCEECGGGGT---------------TCCTTSSH
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhh--ccceEEeHhhcC---------------cCCCCChH
Confidence 4678999999999999999999999999999999999887421 011 22111100 01111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEecCc-------h-HHHHhhccccccCCCchHHHHHHHH
Q 002151 572 HKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG-IAVADS-------T-DAARSASDIVLTEPGLSVIISAVLT 638 (959)
Q Consensus 572 ~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~g-------t-d~Ak~aADivL~~~~~~~I~~ai~~ 638 (959)
-=..+.+.+.-....|.|+||+.||..|.++|+++ |.+..| . +..+..+|+++ +++..+...+..
T Consensus 173 ~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi--~~l~el~~~l~~ 246 (259)
T 4eek_A 173 LYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVL--TSHAELRAALAE 246 (259)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEE--CSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhh--CCHHHHHHHHHh
Confidence 22333444433345699999999999999999998 555433 2 23344589999 678888887764
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.82 E-value=2.8e-05 Score=77.67 Aligned_cols=126 Identities=14% Similarity=0.109 Sum_probs=81.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCc---------------HHHHHHHHHhC--CCCCCCCCccccCccccccCCcch
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQL---------------AIGKETGRRLG--MGTNMYPSSALLGEKKDTIVGLPV 555 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lG--i~~~~~~~~~l~g~~~~~~~~~~~ 555 (959)
++.|++.+++++|++.|+++.++|+... ..+..+.+++| +..- + .....+.+.
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~-~~~~~~~~~-------- 96 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAI-F-MCPHGPDDG-------- 96 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEE-E-EECCCTTSC--------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEE-E-EcCCCCCCC--------
Confidence 5789999999999999999999999885 55566667777 3210 0 000000000
Q ss_pred HHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe---eEEecCchHHHH----hhccccccCCC
Q 002151 556 DDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADI---GIAVADSTDAAR----SASDIVLTEPG 628 (959)
Q Consensus 556 ~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdV---GIamg~gtd~Ak----~aADivL~~~~ 628 (959)
..+..-.|+-=..+.+.+.-....+.|+||+.||..|.++|++ +|+.|.+..... ..+|+++ ++
T Consensus 97 -------~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~--~~ 167 (179)
T 3l8h_A 97 -------CACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVC--ED 167 (179)
T ss_dssp -------CSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEE--SS
T ss_pred -------CCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEe--cC
Confidence 0011112222233444444445669999999999999999994 677675555444 4579998 66
Q ss_pred chHHHHHHH
Q 002151 629 LSVIISAVL 637 (959)
Q Consensus 629 ~~~I~~ai~ 637 (959)
+..+...+.
T Consensus 168 l~el~~~l~ 176 (179)
T 3l8h_A 168 LAAVAEQLL 176 (179)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888777664
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=1.6e-05 Score=83.04 Aligned_cols=124 Identities=13% Similarity=0.045 Sum_probs=83.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..- -..++.+++. ....-.|+-
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~----------------~~~Kp~~~~ 166 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRV--LDSCLSADDL----------------KIYKPDPRI 166 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEGGGT----------------TCCTTSHHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHH--cCEEEEcccc----------------CCCCCCHHH
Confidence 5789999999999999999999999999988889999998421 1122222111 011223333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeE---EecCchHHHHhhc-cccccCCCchHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGI---AVADSTDAARSAS-DIVLTEPGLSVIISAV 636 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGI---amg~gtd~Ak~aA-DivL~~~~~~~I~~ai 636 (959)
-..+.+.+.-....|.|+||+.||..|.+.|++.. ..|.+.+..+..+ |+++ +++..+...+
T Consensus 167 ~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 232 (240)
T 2no4_A 167 YQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQV--NSLSELWPLL 232 (240)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceee--CCHHHHHHHH
Confidence 34455555444456899999999999999999554 3343322223456 8888 5677777655
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=2.8e-05 Score=82.85 Aligned_cols=64 Identities=25% Similarity=0.297 Sum_probs=52.2
Q ss_pred hhHHHHHHHHhhC-C-----CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 571 EHKFEIVKRLQAR-K-----HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 571 e~K~~iV~~Lq~~-g-----~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
.+|...++.+.++ | ..|+++||+.||.+|++.|++|++|+++.+ . +++++..+++-..+.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c--CCcEEeCCCCchHHHHHHH
Confidence 5788888877654 3 569999999999999999999999998888 3 7888887776666666654
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.78 E-value=9.1e-05 Score=77.43 Aligned_cols=125 Identities=14% Similarity=0.145 Sum_probs=83.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.+++.. ...-.|+-
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~Kp~~~~ 155 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDF--FEHVIISDFEG----------------VKKPHPKI 155 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGG--CSEEEEGGGGT----------------CCTTCHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhh--ccEEEEeCCCC----------------CCCCCHHH
Confidence 4679999999999999999999999998888888889987421 11222221100 11112222
Q ss_pred HHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCeeEEe---cCchHHHHh---hccccccCCCchHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGV-NDAPALKVADIGIAV---ADSTDAARS---ASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGv-NDapALk~AdVGIam---g~gtd~Ak~---aADivL~~~~~~~I~~ai~ 637 (959)
=..+.+.+.-....+.|+||+. ||..|.+.|+++... |.+...... .+|+++ +++..+...+.
T Consensus 156 ~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 225 (241)
T 2hoq_A 156 FKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEI--DNLESLLEVLA 225 (241)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEE--CCHHHHHHHHH
Confidence 2333444443445689999998 999999999997654 333333332 689888 56777776653
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=1.2e-05 Score=86.46 Aligned_cols=129 Identities=10% Similarity=-0.018 Sum_probs=86.2
Q ss_pred CCCCcchHHHHHHHHhCCC--eEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecC
Q 002151 492 DPPRHDSAETIRRALDLGV--SVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVF 569 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI--~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~ 569 (959)
-++.|++.+.++.|++.|+ ++.++|+.....+..+.+.+|+... -..++.++..... ...+.-.
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~--fd~v~~~~~~~~~------------~~~~Kp~ 206 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADL--FDGLTYCDYSRTD------------TLVCKPH 206 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTS--CSEEECCCCSSCS------------SCCCTTS
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccc--cceEEEeccCCCc------------ccCCCcC
Confidence 3578999999999999999 9999999999999999999998532 1222222111000 0111222
Q ss_pred hhhHHHHHHHHhhCC-CEEEEEcCCcCChhhhhcCCeeEEecCchHHH------HhhccccccCCCchHHHHHH
Q 002151 570 PEHKFEIVKRLQARK-HIVGMTGDGVNDAPALKVADIGIAVADSTDAA------RSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 570 Pe~K~~iV~~Lq~~g-~~V~m~GDGvNDapALk~AdVGIamg~gtd~A------k~aADivL~~~~~~~I~~ai 636 (959)
|+-=..+.+.+.-.. ..|.|+||+.||..|.++|++|.+|+.+.... ...||+++ +++..+..++
T Consensus 207 ~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi--~sl~el~~~l 278 (282)
T 3nuq_A 207 VKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVI--SDILELPHVV 278 (282)
T ss_dssp HHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEE--SSGGGGGGTS
T ss_pred HHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEe--CCHHHHHHHh
Confidence 332233444444344 67999999999999999999999887322211 23788888 5677666544
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.73 E-value=1.2e-05 Score=83.29 Aligned_cols=124 Identities=8% Similarity=0.041 Sum_probs=85.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.+++. ....-.|+-
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~----------------~~~Kp~~~~ 156 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDG--FDHLLSVDPV----------------QVYKPDNRV 156 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEESGGG----------------TCCTTSHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhh--hheEEEeccc----------------CCCCCCHHH
Confidence 4779999999999999999999999998888888889988421 1122222111 012223444
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEec----CchHHHHhhccccccCCCchHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVA----DSTDAARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg----~gtd~Ak~aADivL~~~~~~~I~~ai 636 (959)
-..+.+.+.-....|.|+||+.||..|.++|+++.++- +..+..+..+|+++ +++..+...+
T Consensus 157 ~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 222 (232)
T 1zrn_A 157 YELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVELF 222 (232)
T ss_dssp HHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTTC
T ss_pred HHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEE--CCHHHHHHHH
Confidence 44555555544456899999999999999999998873 22222345688887 5577666544
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.64 E-value=4.9e-05 Score=78.12 Aligned_cols=115 Identities=12% Similarity=-0.036 Sum_probs=79.2
Q ss_pred CCCcchHHHHHHHHhCC-CeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 493 PPRHDSAETIRRALDLG-VSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aG-I~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
++.|++.+.++.|++.| +++.++|+........+.+.+|+... -.. +++.-.|
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~--f~~-----------------------~~~~~kp- 158 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPY--FDH-----------------------IEVMSDK- 158 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGG--CSE-----------------------EEEESCC-
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhh--hhe-----------------------eeecCCC-
Confidence 56789999999999999 99999999888888888888887421 011 1222222
Q ss_pred hHHHHHH----HHhhCCCEEEEEcCCc-CChhhhhcCCeeEEe-------cCchHHHHhh-ccccccCCCchHHHHHH
Q 002151 572 HKFEIVK----RLQARKHIVGMTGDGV-NDAPALKVADIGIAV-------ADSTDAARSA-SDIVLTEPGLSVIISAV 636 (959)
Q Consensus 572 ~K~~iV~----~Lq~~g~~V~m~GDGv-NDapALk~AdVGIam-------g~gtd~Ak~a-ADivL~~~~~~~I~~ai 636 (959)
|.+.++ .+.-....|.|+||+. ||..|.+.|+++.++ |.+....+.. +|+++ +++..++..+
T Consensus 159 -k~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~--~~l~el~~~l 233 (234)
T 3ddh_A 159 -TEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQV--KRLDDLLSLL 233 (234)
T ss_dssp -SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEEC--SSGGGHHHHC
T ss_pred -CHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceec--ccHHHHHHhc
Confidence 333333 3332345699999997 999999999999887 2222222333 48888 6688777653
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.63 E-value=6.5e-05 Score=77.74 Aligned_cols=123 Identities=12% Similarity=0.056 Sum_probs=83.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|+ .|+++.++|+.........-+.+|+... -..++.+++.. ...-.|+-
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~kp~~~~ 167 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRY--FKKIILSEDLG----------------VLKPRPEI 167 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGG--CSEEEEGGGTT----------------CCTTSHHH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhh--ceeEEEeccCC----------------CCCCCHHH
Confidence 56789999999999 9999999999998888888888988531 11222221110 11111222
Q ss_pred HHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCeeEEecCchH--HHHhhccccccCCCchHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGV-NDAPALKVADIGIAVADSTD--AARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGv-NDapALk~AdVGIamg~gtd--~Ak~aADivL~~~~~~~I~~ai 636 (959)
-..+.+.+.-....|.|+||+. ||..|.++|++++++.+... ..+..+|+++ +++..+..+.
T Consensus 168 ~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi--~sl~e~~~~~ 232 (240)
T 3qnm_A 168 FHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHI--HSLKELMNLL 232 (240)
T ss_dssp HHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEE--SSTHHHHHHT
T ss_pred HHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEE--CCHHHHHHHH
Confidence 2233333332335699999996 99999999999999973222 4455789999 6677766654
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.59 E-value=1.2e-05 Score=84.63 Aligned_cols=124 Identities=15% Similarity=0.087 Sum_probs=75.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHH-HHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETG-RRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia-~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
++.|++.+.++.|++.|+++.++|+.........- +..|+... -..++.+++.+ .....-.|+
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~--f~~~~~~~~~~--------------~~~~Kp~~~ 175 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSL--FSHIVLGDDPE--------------VQHGKPDPD 175 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTT--SSCEECTTCTT--------------CCSCTTSTH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhh--eeeEEecchhh--------------ccCCCCChH
Confidence 57899999999999999999999999866544322 22233211 11122221000 000111122
Q ss_pred hHHHHHHHHhhCC--CEEEEEcCCcCChhhhhcCC---eeEEecCchHHHHhhccccccCCCchHHHH
Q 002151 572 HKFEIVKRLQARK--HIVGMTGDGVNDAPALKVAD---IGIAVADSTDAARSASDIVLTEPGLSVIIS 634 (959)
Q Consensus 572 ~K~~iV~~Lq~~g--~~V~m~GDGvNDapALk~Ad---VGIamg~gtd~Ak~aADivL~~~~~~~I~~ 634 (959)
-=..+.+.+.-.. ..|.|+||+.||..|.++|+ |++++|++.+..+..||+++ +++..+..
T Consensus 176 ~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~--~sl~el~~ 241 (250)
T 3l5k_A 176 IFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVL--NSLQDFQP 241 (250)
T ss_dssp HHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEEC--SCGGGCCG
T ss_pred HHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEee--cCHHHhhH
Confidence 1122222222222 67999999999999999999 66666766666778999998 55665543
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=8e-05 Score=76.87 Aligned_cols=135 Identities=16% Similarity=0.152 Sum_probs=83.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC---------------cHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHH
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDD 557 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~---------------~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 557 (959)
++.|++.+++++|+++|+++.++|+.. ...+..+.+++|+. .......+...+.... +
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---f~~~~~~~~~~~~~~~----~ 122 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD---LDGIYYCPHHPQGSVE----E 122 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC---CSEEEEECCBTTCSSG----G
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc---eEEEEECCcCCCCccc----c
Confidence 678999999999999999999999998 36677788888874 1111111110000000 0
Q ss_pred HHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee--EEe--cCc-hHHHHhhccccccCCCchHH
Q 002151 558 LIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG--IAV--ADS-TDAARSASDIVLTEPGLSVI 632 (959)
Q Consensus 558 ~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG--Iam--g~g-td~Ak~aADivL~~~~~~~I 632 (959)
......+..-.|+-=..+.+.+.-....+.|+||+.||..+.++|++. |.+ |.. .+.....+|+++ +++..+
T Consensus 123 -~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi--~~l~el 199 (211)
T 2gmw_A 123 -FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADL 199 (211)
T ss_dssp -GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGH
T ss_pred -cCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEe--CCHHHH
Confidence 000001122233333344455543445689999999999999999953 344 422 233344689988 668888
Q ss_pred HHHHH
Q 002151 633 ISAVL 637 (959)
Q Consensus 633 ~~ai~ 637 (959)
...+.
T Consensus 200 ~~~l~ 204 (211)
T 2gmw_A 200 PQAIK 204 (211)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77664
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.56 E-value=6.6e-05 Score=79.26 Aligned_cols=123 Identities=14% Similarity=0.114 Sum_probs=85.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|+ |+++.++|+.....+..+.+.+|+... -+.++.+++. ....-.|+-
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~--f~~~~~~~~~----------------~~~Kp~~~~ 152 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDS--FDAVISVDAK----------------RVFKPHPDS 152 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEGGGG----------------TCCTTSHHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhh--ccEEEEcccc----------------CCCCCCHHH
Confidence 67899999999999 999999999999989989999987421 1122222111 012223444
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCc---------------------------hHHHHhhcccccc
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADS---------------------------TDAARSASDIVLT 625 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~g---------------------------td~Ak~aADivL~ 625 (959)
-..+.+.+.-....+.|+||+.||..|.++|+++.++.+. .+..+..+|+++
T Consensus 153 ~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~- 231 (253)
T 1qq5_A 153 YALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV- 231 (253)
T ss_dssp HHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE-
T ss_pred HHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee-
Confidence 4445555543445689999999999999999999988643 112234588888
Q ss_pred CCCchHHHHHHH
Q 002151 626 EPGLSVIISAVL 637 (959)
Q Consensus 626 ~~~~~~I~~ai~ 637 (959)
+++..+...+.
T Consensus 232 -~~~~el~~~l~ 242 (253)
T 1qq5_A 232 -PALGDLPRLVR 242 (253)
T ss_dssp -SSGGGHHHHHH
T ss_pred -CCHHHHHHHHH
Confidence 66888877664
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00011 Score=76.86 Aligned_cols=123 Identities=13% Similarity=0.081 Sum_probs=80.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++.|+++.++|+.....+..+-+++|+. . -..++.+++.. ...-.|+-
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~--f~~~~~~~~~~----------------~~Kp~p~~ 170 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S--FDFALGEKSGI----------------RRKPAPDM 170 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T--CSEEEEECTTS----------------CCTTSSHH
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c--eeEEEecCCCC----------------CCCCCHHH
Confidence 35689999999999999999999999888888888888874 2 12233222110 01111221
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee---EEecCch--HHHHhhccccccCCCchHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG---IAVADST--DAARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG---Iamg~gt--d~Ak~aADivL~~~~~~~I~~ai 636 (959)
=..+.+.+.-....|.|+||+.||..|.++|++. +++|.+. +.....+|+++ +++..+...+
T Consensus 171 ~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~--~~~~el~~~l 237 (240)
T 2hi0_A 171 TSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIV--DTAEKLEEAI 237 (240)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEE--CSHHHHHHHH
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEE--CCHHHHHHHh
Confidence 1223333433345699999999999999999994 4444332 33334689888 5677766544
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00012 Score=73.02 Aligned_cols=108 Identities=12% Similarity=-0.006 Sum_probs=70.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
.+.|++.+.++.|++.|+++.++|++.. .+....+++|+... -..++.+++. ....-.|+-
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~--f~~~~~~~~~----------------~~~kp~~~~ 142 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAY--FTEVVTSSSG----------------FKRKPNPES 142 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGG--EEEEECGGGC----------------CCCTTSCHH
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhh--eeeeeecccc----------------CCCCCCHHH
Confidence 3679999999999999999999998865 46677777887421 0111111110 001111222
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhcc
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASD 621 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aAD 621 (959)
-..+.+.+.-. .|.++||+.||.+|++.|++++++.+.....++..+
T Consensus 143 ~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 189 (190)
T 2fi1_A 143 MLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred HHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCCChhhccC
Confidence 23333333322 689999999999999999999888755555555544
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0001 Score=76.18 Aligned_cols=124 Identities=10% Similarity=0.063 Sum_probs=82.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++. +++.++|+.....+...-+.+|+..- -..++.+++.. ...-.|+-
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~kp~~~~ 163 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPF--FKDIFVSEDTG----------------FQKPMKEY 163 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGG--CSEEEEGGGTT----------------SCTTCHHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhh--hheEEEecccC----------------CCCCChHH
Confidence 5778999999999999 99999999998888888888888521 11222211100 11111222
Q ss_pred HHHHHHHHh-hCCCEEEEEcCCc-CChhhhhcCCee-EEecCc--hHHHHhhccccccCCCchHHHHHHH
Q 002151 573 KFEIVKRLQ-ARKHIVGMTGDGV-NDAPALKVADIG-IAVADS--TDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 573 K~~iV~~Lq-~~g~~V~m~GDGv-NDapALk~AdVG-Iamg~g--td~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
-..+.+.+. -....|.|+||+. ||..|.+.|+++ |.++.| .+..+..+|+++ +++..+...+.
T Consensus 164 ~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~--~~~~el~~~l~ 231 (238)
T 3ed5_A 164 FNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEI--RKLEELYHILN 231 (238)
T ss_dssp HHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEE--SSGGGHHHHHT
T ss_pred HHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEE--CCHHHHHHHHH
Confidence 222222222 2224699999998 999999999995 444433 455566789998 66888877764
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.54 E-value=9.9e-06 Score=82.69 Aligned_cols=120 Identities=8% Similarity=0.039 Sum_probs=79.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++. +++.++|+.....+..+.+++|+... -..++.+++. ....-.|+-
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~----------------~~~KP~~~~ 143 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMR--MAVTISADDT----------------PKRKPDPLP 143 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGG--EEEEECGGGS----------------SCCTTSSHH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhh--ccEEEecCcC----------------CCCCCCcHH
Confidence 4689999999999999 99999999998888888888877421 0111111110 011111333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecC----chHHHHhhccccccCCCchHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVAD----STDAARSASDIVLTEPGLSVIIS 634 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~----gtd~Ak~aADivL~~~~~~~I~~ 634 (959)
-..+.+.+.-....|.|+||+.||.+|.+.|++++++.+ ..+..++ +|+++ +++..+..
T Consensus 144 ~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~--~~~~el~~ 206 (209)
T 2hdo_A 144 LLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRF--QKPLDILE 206 (209)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEE--SSGGGGGG
T ss_pred HHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEe--CCHHHHHH
Confidence 334444444334569999999999999999999999742 2333344 89888 44555443
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.51 E-value=7.3e-05 Score=75.80 Aligned_cols=120 Identities=10% Similarity=0.058 Sum_probs=82.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+ ++.|++. +++.++|+.....+..+.+.+|+... -..++.+++. ....-.|+-
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~----------------~~~Kp~~~~ 133 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRY--FKGIFSAESV----------------KEYKPSPKV 133 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEGGGG----------------TCCTTCHHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHh--CcEEEehhhc----------------CCCCCCHHH
Confidence 56789999 9999999 99999999998888888899998421 1122222110 011122443
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEe-c---CchHHHHhhccccccCCCchHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAV-A---DSTDAARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIam-g---~gtd~Ak~aADivL~~~~~~~I~~ai 636 (959)
-..+.+.+. ...+.|+||+.||..|.++|+++..+ . ++.+..+..+|+++ +++..+...+
T Consensus 134 ~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 197 (201)
T 2w43_A 134 YKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIV--NDFKELYEWI 197 (201)
T ss_dssp HHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEE--CCHHHHHHHH
Confidence 345555665 45689999999999999999999776 2 22222234688887 5677776655
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=97.51 E-value=5.5e-05 Score=81.20 Aligned_cols=67 Identities=22% Similarity=0.276 Sum_probs=56.5
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 571 EHKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 571 e~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
..|...++.+.+. | ..|+++||+.||.+|++.|++|++|+++.+..++.||++..+++-..+..+++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 3788888777654 3 35999999999999999999999999998989999999998777777777765
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.50 E-value=9e-05 Score=76.24 Aligned_cols=122 Identities=8% Similarity=0.067 Sum_probs=79.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCcee--ecCh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFA--GVFP 570 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfa--r~~P 570 (959)
++.+++.+.++.++. ++.++|+........+.+++|+... .+..+..++... .. .-.|
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~----------------~~~~kpk~ 146 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPY-FAPHIYSAKDLG----------------ADRVKPKP 146 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGG-TTTCEEEHHHHC----------------TTCCTTSS
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHh-ccceEEeccccc----------------cCCCCcCH
Confidence 457789998888874 9999999999888888888887421 101122111100 00 1122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEecCchH-------HHHhh-ccccccCCCchHHHHHH
Q 002151 571 EHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG-IAVADSTD-------AARSA-SDIVLTEPGLSVIISAV 636 (959)
Q Consensus 571 e~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~gtd-------~Ak~a-ADivL~~~~~~~I~~ai 636 (959)
+--..+.+.+.-....|.++||+.||.+|++.|+++ |+++.+.+ ..++. ||+++ +++..+...+
T Consensus 147 ~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~--~~~~el~~~l 219 (229)
T 2fdr_A 147 DIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVI 219 (229)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHH
T ss_pred HHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceee--cCHHHHHHHH
Confidence 222334444443445689999999999999999998 77765443 35556 99998 5577776655
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.47 E-value=4.5e-05 Score=80.50 Aligned_cols=67 Identities=12% Similarity=0.236 Sum_probs=53.3
Q ss_pred eecChh--hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcC--CeeEEecCchHHHHhhccccccC-CCchHHHHHHH
Q 002151 566 AGVFPE--HKFEIVKRLQARKHIVGMTGDGVNDAPALKVA--DIGIAVADSTDAARSASDIVLTE-PGLSVIISAVL 637 (959)
Q Consensus 566 ar~~Pe--~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~A--dVGIamg~gtd~Ak~aADivL~~-~~~~~I~~ai~ 637 (959)
-.+.|. +|..-++.|.+.-. |+++||+.||.+||+.| +.|||||++ ++.||+++.+ ++-..+..+++
T Consensus 152 lei~~~~~~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 152 IELRVPGVNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp EEEECTTCCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred EEEEcCCCCHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEECCC----CCcceEEeCCCCCHHHHHHHHH
Confidence 344454 79999999987633 89999999999999999 999999987 6789998866 55555655554
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.47 E-value=9.5e-05 Score=79.37 Aligned_cols=114 Identities=15% Similarity=0.007 Sum_probs=76.8
Q ss_pred CCCcchHHHHHHHHhC-CCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 493 PPRHDSAETIRRALDL-GVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~a-GI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
++.+++.+.++.|++. |+++.++|+.....+....+.+|+.. + ..++.+++.. ...-.|+
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~--f-~~i~~~~~~~----------------~~kp~~~ 174 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR--P-EYFITANDVK----------------QGKPHPE 174 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC--C-SSEECGGGCS----------------SCTTSSH
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc--c-CEEEEcccCC----------------CCCCChH
Confidence 3578999999999999 99999999999988888888888852 1 2233322110 0111233
Q ss_pred hHHHHHHHHhh-------CCCEEEEEcCCcCChhhhhcCCeeEEe---cCchH-HHHhhcccccc
Q 002151 572 HKFEIVKRLQA-------RKHIVGMTGDGVNDAPALKVADIGIAV---ADSTD-AARSASDIVLT 625 (959)
Q Consensus 572 ~K~~iV~~Lq~-------~g~~V~m~GDGvNDapALk~AdVGIam---g~gtd-~Ak~aADivL~ 625 (959)
--..+.+.+.- ....|.++||+.||..|+++|++++++ +.+.+ ..+..||+++.
T Consensus 175 ~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~ 239 (275)
T 2qlt_A 175 PYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVK 239 (275)
T ss_dssp HHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEES
T ss_pred HHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEEC
Confidence 23334444443 334699999999999999999977665 43333 33335898873
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.47 E-value=7.3e-05 Score=81.77 Aligned_cols=71 Identities=25% Similarity=0.249 Sum_probs=59.1
Q ss_pred ecChh--hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhcccccc-CCCchHHHHHHH
Q 002151 567 GVFPE--HKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLT-EPGLSVIISAVL 637 (959)
Q Consensus 567 r~~Pe--~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~-~~~~~~I~~ai~ 637 (959)
.+.|. .|...++.+.+. | ..|+++||+.||.+|++.|++|++|+++.+..++.||+++. +++-..+..+++
T Consensus 217 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 217 EVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred EecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 44444 788888887654 3 35899999999999999999999999999989999999998 777777877775
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.46 E-value=6.9e-05 Score=78.58 Aligned_cols=122 Identities=13% Similarity=0.091 Sum_probs=84.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.+++.+.++.|++. +++.++|+........+.+.+|+.- ..++.++.. ....-.|+-
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f----~~~~~~~~~----------------~~~kp~~~~ 178 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW----DMLLCADLF----------------GHYKPDPQV 178 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC----SEECCHHHH----------------TCCTTSHHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc----ceEEeeccc----------------ccCCCCHHH
Confidence 4678999999999985 9999999999988888889998841 111111100 011112333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecC-----ch---HH--HHhhccccccCCCchHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVAD-----ST---DA--ARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~-----gt---d~--Ak~aADivL~~~~~~~I~~ai~ 637 (959)
=..+.+.+.-....|.|+||+.||..|.+.|+++++|.+ |. +. .+..+|+++ +++..+...+.
T Consensus 179 ~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~--~~l~el~~~l~ 251 (254)
T 3umc_A 179 YLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIA--SDLLDLHRQLA 251 (254)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEE--CCHHHHHHHhc
Confidence 333444444334569999999999999999999999974 22 11 255789998 67888877664
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.45 E-value=8.8e-05 Score=77.45 Aligned_cols=119 Identities=10% Similarity=0.042 Sum_probs=83.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++. +++.++|+........+.+.+|+.-+ .++.++. +....|.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~----~~~~~~~------------------~~~~kp~- 171 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWD----VIIGSDI------------------NRKYKPD- 171 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCS----CCCCHHH------------------HTCCTTS-
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCee----EEEEcCc------------------CCCCCCC-
Confidence 5679999999999996 99999999999999999999998411 1111110 1111222
Q ss_pred HHHHHH-HHhhC---CCEEEEEcCCcCChhhhhcCCeeEEecCchH---------H-HHhhccccccCCCchHHHHHHHH
Q 002151 573 KFEIVK-RLQAR---KHIVGMTGDGVNDAPALKVADIGIAVADSTD---------A-ARSASDIVLTEPGLSVIISAVLT 638 (959)
Q Consensus 573 K~~iV~-~Lq~~---g~~V~m~GDGvNDapALk~AdVGIamg~gtd---------~-Ak~aADivL~~~~~~~I~~ai~~ 638 (959)
.++++ .+++. ...|.|+||+.||..|.++|+++++|.+... . .+..+|+++ +++..+...+..
T Consensus 172 -~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~--~~~~el~~~l~~ 248 (254)
T 3umg_A 172 -PQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISA--TDITDLAAQLRA 248 (254)
T ss_dssp -HHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEE--SSHHHHHHHHHH
T ss_pred -HHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEE--CCHHHHHHHhcC
Confidence 12222 23333 3569999999999999999999999964211 1 356789999 778888887753
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.44 E-value=7.5e-05 Score=80.89 Aligned_cols=66 Identities=23% Similarity=0.310 Sum_probs=56.4
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 572 HKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 572 ~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
+|...++.+.+. | ..|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++-..+..+++
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHH
Confidence 688877777653 2 35899999999999999999999999998999999999998777777877775
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.43 E-value=8.5e-05 Score=76.73 Aligned_cols=122 Identities=13% Similarity=0.078 Sum_probs=82.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++ |+++.++|+.........-+.++- +-..++.+.+. ....-.|+-
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~----~fd~i~~~~~~----------------~~~KP~~~~ 157 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV----EFDHIITAQDV----------------GSYKPNPNN 157 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS----CCSEEEEHHHH----------------TSCTTSHHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC----ccCEEEEcccc----------------CCCCCCHHH
Confidence 678999999999999 899999999888777666554331 11122221110 122334554
Q ss_pred HHHHHHHHhhC---CCEEEEEcCCc-CChhhhhcCCeeEEecCch-----------HHHHhhccccccCCCchHHHHHHH
Q 002151 573 KFEIVKRLQAR---KHIVGMTGDGV-NDAPALKVADIGIAVADST-----------DAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 573 K~~iV~~Lq~~---g~~V~m~GDGv-NDapALk~AdVGIamg~gt-----------d~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
....++.+++. ...|.|+||+. ||..|.++|++++++.+.. +..+..+|+++ +++..+...+.
T Consensus 158 ~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~--~~~~el~~~l~ 235 (240)
T 3smv_A 158 FTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRF--NSMGEMAEAHK 235 (240)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEe--CCHHHHHHHHH
Confidence 44554434443 35699999996 9999999999999995321 23346899998 66888777664
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.43 E-value=9.8e-05 Score=78.64 Aligned_cols=124 Identities=15% Similarity=0.184 Sum_probs=85.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.++++.|++.|+++.++|+.... ...+-+.+|+... -..++.+.+. ....-.|+-
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~--f~~~~~~~~~----------------~~~Kp~~~~ 166 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREH--FDFVLTSEAA----------------GWPKPDPRI 166 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGG--CSCEEEHHHH----------------SSCTTSHHH
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHh--hhEEEeeccc----------------CCCCCCHHH
Confidence 36799999999999999999999987664 5777788887421 1111211110 112233444
Q ss_pred HHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCeeEEec-Cch--HH---HHhhccccccCCCchHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGV-NDAPALKVADIGIAVA-DST--DA---ARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGv-NDapALk~AdVGIamg-~gt--d~---Ak~aADivL~~~~~~~I~~ai~ 637 (959)
-..+.+.+.-....|.|+||+. ||..|.++|+++.++. .+. .. ....+|+++ +++..+...+.
T Consensus 167 ~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~--~~l~el~~~l~ 236 (263)
T 3k1z_A 167 FQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHIL--PSLAHLLPALD 236 (263)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEE--SSGGGHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEe--CCHHHHHHHHH
Confidence 4555566654456799999997 9999999999999986 221 11 223689998 67888887765
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0002 Score=72.21 Aligned_cols=93 Identities=9% Similarity=0.000 Sum_probs=64.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC-cHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQ-LAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~-~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
++.|++.++++.|++.|+++.++||.. ...+..+.+.+|+.... ..+. +++.-.|+
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f--~~~~---------------------~~~~~k~~ 124 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYF--VHRE---------------------IYPGSKIT 124 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTE--EEEE---------------------ESSSCHHH
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhc--ceeE---------------------EEeCchHH
Confidence 678999999999999999999999998 68899999999985210 0000 01111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE
Q 002151 572 HKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIA 608 (959)
Q Consensus 572 ~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIa 608 (959)
.-.++.+.+.-....+.|+||+.||..+.++|++...
T Consensus 125 ~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 125 HFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 2222333333233468999999999999999987543
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00014 Score=76.93 Aligned_cols=66 Identities=17% Similarity=0.146 Sum_probs=54.3
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhh-------ccccccCCCchHHHHHHH
Q 002151 572 HKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSA-------SDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 572 ~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~a-------ADivL~~~~~~~I~~ai~ 637 (959)
.|...++.+.+. | ..|.++||+.||.+|++.|++|++||++.+..++. ||++..+++-..+..+++
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 677777777653 2 35899999999999999999999999998888885 889987777677777664
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.35 E-value=7.7e-05 Score=79.97 Aligned_cols=71 Identities=24% Similarity=0.292 Sum_probs=58.4
Q ss_pred ecChh--hHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 567 GVFPE--HKFEIVKRLQAR----KHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 567 r~~Pe--~K~~iV~~Lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
.+.|. .|...++.+.+. ...|.++||+.||.+|++.|++|++|+++.+..++.||+++.+++-..+..+++
T Consensus 183 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred EEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 34444 788888777653 245899999999999999999999999988888999999998877777777764
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00044 Score=69.81 Aligned_cols=137 Identities=15% Similarity=0.067 Sum_probs=91.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCc---HHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeec
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQL---AIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGV 568 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~---~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~ 568 (959)
-++.||+.++++.|++.|+++.++|+-.. ..+..+-+.+|+..- -..++.+.+... ...+..-
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~--fd~i~~~~~~~~------------~~~~~KP 98 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDY--FDFIYASNSELQ------------PGKMEKP 98 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGG--EEEEEECCTTSS------------TTCCCTT
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhh--eEEEEEcccccc------------ccCCCCc
Confidence 36889999999999999999999998776 888888999998521 111222111000 0012233
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCC-cCChhhhhcCCeeEEe-cCchHH-----H-HhhccccccCCCchHHHHHHHHHH
Q 002151 569 FPEHKFEIVKRLQARKHIVGMTGDG-VNDAPALKVADIGIAV-ADSTDA-----A-RSASDIVLTEPGLSVIISAVLTSR 640 (959)
Q Consensus 569 ~Pe~K~~iV~~Lq~~g~~V~m~GDG-vNDapALk~AdVGIam-g~gtd~-----A-k~aADivL~~~~~~~I~~ai~~gR 640 (959)
.|+--..+.+.+.-....+.|+||. .+|..+-++|++.... ..+... . ...+|.++.+.+++.+..++...+
T Consensus 99 ~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~~ 178 (189)
T 3ib6_A 99 DKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLK 178 (189)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHHH
Confidence 3444445555555445679999999 7999999999987543 332211 1 126788885558999998887765
Q ss_pred HH
Q 002151 641 AI 642 (959)
Q Consensus 641 ~~ 642 (959)
.-
T Consensus 179 ~~ 180 (189)
T 3ib6_A 179 KI 180 (189)
T ss_dssp HH
T ss_pred Hh
Confidence 43
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00056 Score=71.78 Aligned_cols=117 Identities=13% Similarity=0.027 Sum_probs=80.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeec--Ch
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGV--FP 570 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~--~P 570 (959)
++.|++.+.++.|+ .|+++.++|+.....+....+.+|+... -.. +++.- .|
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~-----------------------i~~~~kp~~ 165 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDL--FPR-----------------------IEVVSEKDP 165 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGT--CCC-----------------------EEEESCCSH
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHh--Cce-----------------------eeeeCCCCH
Confidence 56799999999999 9999999999998888888888887421 011 11211 23
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCeeEEec-CchH--------HHHhhccc-cccCCCchHHHHHHH
Q 002151 571 EHKFEIVKRLQARKHIVGMTGDGV-NDAPALKVADIGIAVA-DSTD--------AARSASDI-VLTEPGLSVIISAVL 637 (959)
Q Consensus 571 e~K~~iV~~Lq~~g~~V~m~GDGv-NDapALk~AdVGIamg-~gtd--------~Ak~aADi-vL~~~~~~~I~~ai~ 637 (959)
+--..+.+.+.-....|.++||+. ||..|.+.|++++++- .|.. .....+|+ ++ +++..+...+.
T Consensus 166 ~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 241 (251)
T 2pke_A 166 QTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHHH
T ss_pred HHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHHH
Confidence 333344455544445699999999 9999999999998763 3321 11235787 77 66887776654
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00019 Score=73.57 Aligned_cols=115 Identities=10% Similarity=0.068 Sum_probs=78.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++ |+++.++|+.....+..+-+++|+..- -..++.++ -.+.-
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~--f~~i~~~~----------------------~~~Kp 138 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHF--FDGIYGSS----------------------PEAPH 138 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGG--CSEEEEEC----------------------SSCCS
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhh--eeeeecCC----------------------CCCCC
Confidence 467999999999999 999999999888888888888888521 11122111 01122
Q ss_pred HHHHHH-HHhhCC---CEEEEEcCCcCChhhhhcCCe---eEEecCc-hHHHH-hhccccccCCCchHHHH
Q 002151 573 KFEIVK-RLQARK---HIVGMTGDGVNDAPALKVADI---GIAVADS-TDAAR-SASDIVLTEPGLSVIIS 634 (959)
Q Consensus 573 K~~iV~-~Lq~~g---~~V~m~GDGvNDapALk~AdV---GIamg~g-td~Ak-~aADivL~~~~~~~I~~ 634 (959)
|.++.+ .+++.| ..+.|+||+.||..|.++|++ |+++|.+ .+..+ ..+|+++ +++..+..
T Consensus 139 ~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~--~~~~el~~ 207 (210)
T 2ah5_A 139 KADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLA 207 (210)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHH
T ss_pred ChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEE--CCHHHHHH
Confidence 333333 333333 459999999999999999998 7777744 33333 3589988 55666654
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00024 Score=75.56 Aligned_cols=67 Identities=24% Similarity=0.272 Sum_probs=53.3
Q ss_pred hhHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 571 EHKFEIVKRLQAR----KHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 571 e~K~~iV~~Lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
..|...++.+.++ ...|.++||+.||.+|++.|++|++|+++.+..++.||+++.+.+-..+..+++
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHH
Confidence 3676666666543 246899999999999999999999999888888999999986655555777664
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00058 Score=68.78 Aligned_cols=103 Identities=14% Similarity=0.101 Sum_probs=71.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++.| ++.++|+........+.+.+|+... -..++.+.+. ....-.|+-
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~--f~~~~~~~~~----------------~~~Kp~~~~ 146 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEF--LLAFFTSSAL----------------GVMKPNPAM 146 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGT--CSCEEEHHHH----------------SCCTTCHHH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHh--cceEEeeccc----------------CCCCCCHHH
Confidence 47799999999999999 9999999999888888888887421 1112211100 012223443
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEec-CchH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVA-DSTD 614 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~gtd 614 (959)
-..+.+.+.-....|.|+||+.||..|.+.|++...+- .+..
T Consensus 147 ~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~ 189 (200)
T 3cnh_A 147 YRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDAAQ 189 (200)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCHHH
T ss_pred HHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCchh
Confidence 34455555444456999999999999999999988775 4433
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00014 Score=77.03 Aligned_cols=56 Identities=25% Similarity=0.181 Sum_probs=45.6
Q ss_pred hhHHHHHHHHhhC-----CCEEEEEcCCcCChhhhhcCCeeEEecCch-HHHHhhccccccC
Q 002151 571 EHKFEIVKRLQAR-----KHIVGMTGDGVNDAPALKVADIGIAVADST-DAARSASDIVLTE 626 (959)
Q Consensus 571 e~K~~iV~~Lq~~-----g~~V~m~GDGvNDapALk~AdVGIamg~gt-d~Ak~aADivL~~ 626 (959)
-.|..-++.|.+. ...|+++||+.||.+||+.|++||+||++. +..++.||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 4577777776543 357999999999999999999999999887 6677788988743
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0023 Score=65.25 Aligned_cols=124 Identities=17% Similarity=0.159 Sum_probs=80.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.++++.|++.|+++.++|+.....+...-+.+|+..- -..++.+++. ....-.|+-
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~--fd~~~~~~~~----------------~~~KP~p~~ 145 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKY--FDVMVFGDQV----------------KNGKPDPEI 145 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG--CSEEECGGGS----------------SSCTTSTHH
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCcc--cccccccccc----------------CCCcccHHH
Confidence 4678999999999999999999999999999999999998531 1222222111 012223333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee----EEec-CchHHHHhhccccccCCCchHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG----IAVA-DSTDAARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG----Iamg-~gtd~Ak~aADivL~~~~~~~I~~ai 636 (959)
=....+.+.-..+.|.|+||..+|..+-++|++. +.-| +..+.-+++.+.++.+ ...+++.+
T Consensus 146 ~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~--~~eli~~l 212 (216)
T 3kbb_A 146 YLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVK--PEEILNVL 212 (216)
T ss_dssp HHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEEC--GGGHHHHH
T ss_pred HHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECC--HHHHHHHH
Confidence 3344444544445699999999999999999974 2223 3334444454444544 34455544
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0086 Score=59.20 Aligned_cols=131 Identities=13% Similarity=0.156 Sum_probs=78.5
Q ss_pred eeeCceEEEEEEEeeecCC--CCCHHHHHHHHHHhcccccCChHHHHHHHHhcCchhh--hccceEeEeecCCCCCceEE
Q 002151 338 LTLNKLTVDKILIEVVFGN--GVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEA--RAEITEVHFLPFNPTDKRTA 413 (959)
Q Consensus 338 LT~n~m~v~~~~i~~~~~~--~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~--~~~~~~l~~~pF~s~~kr~s 413 (959)
||+|+|+|.++. .+.. +.+.++++.+++.++... .||+..||++++...... .......+.+| .+-+.
T Consensus 1 LT~G~p~V~~v~---~~~~~~~~~~~~lL~laaslE~~S-eHPlA~AIv~~a~~~~~~~~~~~~~~f~~i~----G~Gv~ 72 (165)
T 2arf_A 1 AGHMVPRVMRVL---LLGDVATLPLRKVLAVVGTAEASS-EHPLGVAVTKYCKEELGTETLGYCTDFQAVP----GCGIG 72 (165)
T ss_dssp CCCCCCCEEEEE---ECCCTTTSCHHHHHHHHHHHHTTS-CSTTHHHHHHHHHHHHTCCCCCCEEEEEEET----TTEEE
T ss_pred CCCceeEEEEEE---eeCCcCCCCHHHHHHHHHHHHccC-CChHHHHHHHHHHHhcCCCCCCCcCceEEec----CccEE
Confidence 799999999865 3321 246778888888776654 469999999876321000 01122223332 22222
Q ss_pred EEEEec------------------------------CCeEEEEEeCCHHHHHHhhccchhHHHHHHHHHHHHHHccCeEE
Q 002151 414 LTYTDK------------------------------NGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSL 463 (959)
Q Consensus 414 v~~~~~------------------------------~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~Glr~l 463 (959)
..+... ..+.+.+.-|+++.+.+..-. ....+...+..+..+|..++
T Consensus 73 a~v~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~---~~~~~~~~~~~~~~~G~T~v 149 (165)
T 2arf_A 73 CKVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLT---ISSDVSDAMTDHEMKGQTAI 149 (165)
T ss_dssp EEEECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHCS---SCHHHHHHHHHHHTTTSEEE
T ss_pred EEEcCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCCC---CCHHHHHHHHHHHhCCCeEE
Confidence 233211 012234566999887553211 12233445566778999999
Q ss_pred EEEEeecCCCCCCCCCCCceEEEEeecCC
Q 002151 464 GVARQEVPAGTKDSPGGPWEFIGLLPLFD 492 (959)
Q Consensus 464 ~vA~~~~~~~~~~~~e~~l~~lGli~l~D 492 (959)
.+|.+. .++|++++.|
T Consensus 150 ~va~dg-------------~~~g~i~l~D 165 (165)
T 2arf_A 150 LVAIDG-------------VLCGMIAIAD 165 (165)
T ss_dssp EEEETT-------------EEEEEEEECC
T ss_pred EEEECC-------------EEEEEEEEEC
Confidence 999875 7999999988
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0002 Score=72.79 Aligned_cols=101 Identities=6% Similarity=-0.036 Sum_probs=67.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHH------hCCCCCCCCCccccCccccccCCcchHHHHhhcCcee
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRR------LGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFA 566 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~------lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfa 566 (959)
++.|++.+.++.|++ |+++.++|+........+.+. .|+... -..++.+++. ...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~--f~~~~~~~~~----------------~~~ 149 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSF--FDKVYASCQM----------------GKY 149 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGG--SSEEEEHHHH----------------TCC
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHH--cCeEEeeccc----------------CCC
Confidence 467899999999999 999999999887777666655 454211 0111111000 011
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCc
Q 002151 567 GVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADS 612 (959)
Q Consensus 567 r~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~g 612 (959)
.-.|+--..+.+.+.-....|.|+||+.||..|.+.|+++..+.++
T Consensus 150 Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~ 195 (211)
T 2i6x_A 150 KPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDN 195 (211)
T ss_dssp TTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred CCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECC
Confidence 2223333445555544445699999999999999999999988743
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0005 Score=73.96 Aligned_cols=66 Identities=21% Similarity=0.144 Sum_probs=33.9
Q ss_pred hHHHHHHHHhhC-C----CE--EEEEcCCcCChhhhhcCCeeEEecCch---HHHHhh--cc-ccccCCCchHHHHHHH
Q 002151 572 HKFEIVKRLQAR-K----HI--VGMTGDGVNDAPALKVADIGIAVADST---DAARSA--SD-IVLTEPGLSVIISAVL 637 (959)
Q Consensus 572 ~K~~iV~~Lq~~-g----~~--V~m~GDGvNDapALk~AdVGIamg~gt---d~Ak~a--AD-ivL~~~~~~~I~~ai~ 637 (959)
.|...++.+.+. | .. |.++||+.||.+|++.|++||+|+++. +..++. || ++..+++-..+..+++
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~ 267 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLD 267 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC------------------------------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHHHHHH
Confidence 576666665432 2 34 899999999999999999999999886 555543 78 8887766666766664
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0017 Score=69.00 Aligned_cols=123 Identities=11% Similarity=0.069 Sum_probs=82.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.++++.|++ |+++.++|+.....+..+.+.+|+..- -..++.+.+.. ...-.|+-
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~--f~~i~~~~~~~----------------~~KP~p~~ 181 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSY--FDAIVIGGEQK----------------EEKPAPSI 181 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGG--CSEEEEGGGSS----------------SCTTCHHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhh--hheEEecCCCC----------------CCCCCHHH
Confidence 577999999999998 699999999999888888899998531 12222222110 11223333
Q ss_pred HHHHHHHHhhCCCEEEEEcC-CcCChhhhhcCCe--eEEecCchH---HHHhhccccccCCCchHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGD-GVNDAPALKVADI--GIAVADSTD---AARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GD-GvNDapALk~AdV--GIamg~gtd---~Ak~aADivL~~~~~~~I~~ai 636 (959)
=..+.+.+.-....+.|+|| ..||..+-++|++ .|.+..+.. .....+|+++ +++..+...+
T Consensus 182 ~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i--~~~~el~~~l 249 (260)
T 2gfh_A 182 FYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALL 249 (260)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEE--CCHHHHHHHH
Confidence 34444555434456999999 5999999999999 677763321 1223578887 5577776655
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.70 E-value=0.00057 Score=70.63 Aligned_cols=133 Identities=18% Similarity=0.030 Sum_probs=76.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCc---------------HHHHHHHHHhCCCCCCCCCccccCccc--cccCCcc
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSALLGEKK--DTIVGLP 554 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lGi~~~~~~~~~l~g~~~--~~~~~~~ 554 (959)
.++.|++.+++++|++.|+++.++|+... .....+.+++|+.-+ ..+..... ..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~----~~~~~~~~~~g~~~--- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD----MVLACAYHEAGVGP--- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS----EEEEECCCTTCCST---
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCcee----eEEEeecCCCCcee---
Confidence 46889999999999999999999999887 577778888887311 11100000 0000
Q ss_pred hHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeE--EecCc--h-HHHHhhccccccCCCc
Q 002151 555 VDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGI--AVADS--T-DAARSASDIVLTEPGL 629 (959)
Q Consensus 555 ~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGI--amg~g--t-d~Ak~aADivL~~~~~ 629 (959)
+. .....+..-.|+-=..+.+.+.-....+.|+||+.||..+.++|++.. .+..| . +.....+|+++ +++
T Consensus 128 --~~-~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i--~~l 202 (218)
T 2o2x_A 128 --LA-IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDS--SEL 202 (218)
T ss_dssp --TC-CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSH--HHH
T ss_pred --ec-ccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEec--ccH
Confidence 00 000001111122112233333323346899999999999999999764 33322 1 11223467776 456
Q ss_pred hHHHHHH
Q 002151 630 SVIISAV 636 (959)
Q Consensus 630 ~~I~~ai 636 (959)
..+...+
T Consensus 203 ~el~~~l 209 (218)
T 2o2x_A 203 GDLLAAI 209 (218)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666554
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0034 Score=63.88 Aligned_cols=120 Identities=10% Similarity=0.008 Sum_probs=74.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.++++.|++.|+++.++||.....+..+.. . +...++.+++.. ...-.|+-
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~----~~d~v~~~~~~~----------------~~KP~p~~ 92 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---P----VNDWMIAAPRPT----------------AGWPQPDA 92 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---T----TTTTCEECCCCS----------------SCTTSTHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---c----cCCEEEECCcCC----------------CCCCChHH
Confidence 578999999999999999999999988777644332 1 112222222110 11222332
Q ss_pred HHHHHHHHhhC-CCEEEEEcCCcCChhhhhcCCe-eEEecCch---------------------------HHHHhhcccc
Q 002151 573 KFEIVKRLQAR-KHIVGMTGDGVNDAPALKVADI-GIAVADST---------------------------DAARSASDIV 623 (959)
Q Consensus 573 K~~iV~~Lq~~-g~~V~m~GDGvNDapALk~AdV-GIamg~gt---------------------------d~Ak~aADiv 623 (959)
=....+.+.-. .+.+.|+||..+|..+-++|++ .|++..|. +.....+|++
T Consensus 93 ~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~v 172 (196)
T 2oda_A 93 CWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSV 172 (196)
T ss_dssp HHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEE
Confidence 22233333322 2458999999999999999997 45554221 0112348888
Q ss_pred ccCCCchHHHHHHH
Q 002151 624 LTEPGLSVIISAVL 637 (959)
Q Consensus 624 L~~~~~~~I~~ai~ 637 (959)
+ +++..+...+.
T Consensus 173 i--~~~~eL~~~l~ 184 (196)
T 2oda_A 173 I--DHLGELESCLA 184 (196)
T ss_dssp E--SSGGGHHHHHH
T ss_pred e--CCHHHHHHHHH
Confidence 8 66888877663
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.00086 Score=63.01 Aligned_cols=104 Identities=12% Similarity=0.041 Sum_probs=67.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+++++|++.|+++.++|+.....+..+.+.+|+... -..++.+.+. ....-.|+-
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~i~~~~~~----------------~~~Kp~~~~ 79 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGV--VDKVLLSGEL----------------GVEKPEEAA 79 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTS--SSEEEEHHHH----------------SCCTTSHHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhh--ccEEEEeccC----------------CCCCCCHHH
Confidence 4678999999999999999999999998888888888887421 1111111100 011223333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE-ecCchH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIA-VADSTD 614 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIa-mg~gtd 614 (959)
-..+.+.+.-....+.|+||+.+|..+.++|++-.. +..+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~~~~~ 122 (137)
T 2pr7_A 80 FQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQFDR 122 (137)
T ss_dssp HHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEECSCHHH
T ss_pred HHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEeCChHH
Confidence 333344443333468999999999999999987432 334443
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0014 Score=69.94 Aligned_cols=56 Identities=20% Similarity=0.293 Sum_probs=47.3
Q ss_pred hHHHHHHHHh-hCCCEEEEEcC----CcCChhhhhcCC-eeEEecCchHHHHhhccccccCC
Q 002151 572 HKFEIVKRLQ-ARKHIVGMTGD----GVNDAPALKVAD-IGIAVADSTDAARSASDIVLTEP 627 (959)
Q Consensus 572 ~K~~iV~~Lq-~~g~~V~m~GD----GvNDapALk~Ad-VGIamg~gtd~Ak~aADivL~~~ 627 (959)
.|..-++.|. -...-|+++|| |.||.+||+.|+ +|++|+++.+..|+.||+|...+
T Consensus 197 sKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~ 258 (262)
T 2fue_A 197 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPET 258 (262)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCC
Confidence 5877788871 11357999999 999999999999 69999999999999999988544
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0018 Score=66.47 Aligned_cols=118 Identities=19% Similarity=0.182 Sum_probs=75.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++. +++.++|+.... -+.+|+... -..++.+++. ....-.|+-
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~--f~~~~~~~~~----------------~~~kp~~~~ 160 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADY--FAFALCAEDL----------------GIGKPDPAP 160 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGG--CSEEEEHHHH----------------TCCTTSHHH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHH--eeeeEEcccc----------------CCCCcCHHH
Confidence 4678999999999998 999999987654 234454311 0111111000 011222333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCeeEEe---c-CchHHHHhhccccccCCCchHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGV-NDAPALKVADIGIAV---A-DSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGv-NDapALk~AdVGIam---g-~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
-..+.+.+.-....|.|+||+. ||..|.++|+++.++ + ...+. ...+|+++ +++..+...+.
T Consensus 161 ~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~--~~l~el~~~l~ 227 (230)
T 3vay_A 161 FLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEI--HNLSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEE--SSGGGHHHHHH
T ss_pred HHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeE--CCHHHHHHHHH
Confidence 3444455544445699999998 999999999998887 2 22222 56789998 67888877664
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0002 Score=72.44 Aligned_cols=101 Identities=7% Similarity=0.005 Sum_probs=62.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHH-hCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRR-LGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~-lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
++.|++.+.++.|++.|+++.++|+........+.+. +|+... -..++.+.+. ....-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~--f~~~~~~~~~----------------~~~Kp~~~ 152 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA--ADHIYLSQDL----------------GMRKPEAR 152 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH--CSEEEEHHHH----------------TCCTTCHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhh--eeeEEEeccc----------------CCCCCCHH
Confidence 4679999999999999999999998764433222222 222100 0011110000 01122333
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecC
Q 002151 572 HKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVAD 611 (959)
Q Consensus 572 ~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~ 611 (959)
--..+.+.+.-....+.|+||+.||..|.+.|++...+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~ 192 (206)
T 2b0c_A 153 IYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVK 192 (206)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred HHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEec
Confidence 4445555555445579999999999999999999887753
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0047 Score=69.61 Aligned_cols=134 Identities=13% Similarity=0.122 Sum_probs=82.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCC-CccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYP-SSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~-~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
++.||+.++++.|+++|+++.++|+-....+..+-+.+|+..- .. ..++.+++... ..+......-...-.|+
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~-Fd~~~Ivs~ddv~~-----~~~~~~~~kp~~KP~P~ 288 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPY-FEADFIATASDVLE-----AENMYPQARPLGKPNPF 288 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGG-SCGGGEECHHHHHH-----HHHHSTTSCCCCTTSTH
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHh-cCCCEEEecccccc-----cccccccccCCCCCCHH
Confidence 6789999999999999999999999999889888899998532 11 12333221100 00000000000111122
Q ss_pred hHHHHHHHHhhC-----------------CCEEEEEcCCcCChhhhhcCCee-EEecCch-------HHHHhhccccccC
Q 002151 572 HKFEIVKRLQAR-----------------KHIVGMTGDGVNDAPALKVADIG-IAVADST-------DAARSASDIVLTE 626 (959)
Q Consensus 572 ~K~~iV~~Lq~~-----------------g~~V~m~GDGvNDapALk~AdVG-Iamg~gt-------d~Ak~aADivL~~ 626 (959)
- +...+++. ...|.|+||+.+|..|-++|++. |++..|. +.....+|+++
T Consensus 289 ~---~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi-- 363 (384)
T 1qyi_A 289 S---YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI-- 363 (384)
T ss_dssp H---HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--
T ss_pred H---HHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEE--
Confidence 1 12222222 25689999999999999999976 4444321 22233689998
Q ss_pred CCchHHHHHHH
Q 002151 627 PGLSVIISAVL 637 (959)
Q Consensus 627 ~~~~~I~~ai~ 637 (959)
+++..+...+.
T Consensus 364 ~sl~eL~~~l~ 374 (384)
T 1qyi_A 364 NHLGELRGVLD 374 (384)
T ss_dssp SSGGGHHHHHS
T ss_pred CCHHHHHHHHH
Confidence 66888776653
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0019 Score=67.95 Aligned_cols=53 Identities=19% Similarity=0.222 Sum_probs=41.8
Q ss_pred hHHHHHHHH-hhCCCEEEEEcC----CcCChhhhhcCCe-eEEecCchHHHHhhccccc
Q 002151 572 HKFEIVKRL-QARKHIVGMTGD----GVNDAPALKVADI-GIAVADSTDAARSASDIVL 624 (959)
Q Consensus 572 ~K~~iV~~L-q~~g~~V~m~GD----GvNDapALk~AdV-GIamg~gtd~Ak~aADivL 624 (959)
+|..-++.| .-...-|+++|| |.||.+||+.|+. |++|+++.+..|+.||+|.
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v~ 246 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLFS 246 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHHCC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhhcC
Confidence 466666655 112357999999 9999999999987 9999999999999999873
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.09 E-value=0.0084 Score=63.50 Aligned_cols=51 Identities=16% Similarity=0.105 Sum_probs=36.4
Q ss_pred CEEEEEcCC-cCChhhhhcCCeeEEec-C---chHHHHh---hccccccCCCchHHHHHHH
Q 002151 585 HIVGMTGDG-VNDAPALKVADIGIAVA-D---STDAARS---ASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 585 ~~V~m~GDG-vNDapALk~AdVGIamg-~---gtd~Ak~---aADivL~~~~~~~I~~ai~ 637 (959)
..|.|+||+ .||..|++.|+++.++. . +.+..++ .+|+++ +++..+..-++
T Consensus 201 ~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~--~~~~el~~~~~ 259 (266)
T 3pdw_A 201 SETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAI--DSLTEWIPYIE 259 (266)
T ss_dssp GGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEE--SSGGGGHHHHH
T ss_pred hhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEe--CCHHHHHHHhh
Confidence 568999999 79999999999877653 2 3333344 399998 66777776654
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.01 E-value=0.0052 Score=65.12 Aligned_cols=43 Identities=19% Similarity=0.291 Sum_probs=33.8
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcC---CCcHHHHHHHHHhCCC
Q 002151 491 FDPPRHDSAETIRRALDLGVSVKMITG---DQLAIGKETGRRLGMG 533 (959)
Q Consensus 491 ~D~lr~~v~eaI~~l~~aGI~v~miTG---D~~~tA~~ia~~lGi~ 533 (959)
.+.+-|+++++|++++++|++++++|| ..........+++|+.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 344557899999999999999999999 4555555566777774
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.01 E-value=0.0081 Score=63.14 Aligned_cols=116 Identities=10% Similarity=0.063 Sum_probs=77.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++.|+++.+.|+-. .+..+-+.+|+..- -..++.+++.. ...-.|+-
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~--Fd~i~~~~~~~----------------~~KP~p~~ 175 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDK--FDFIADAGKCK----------------NNKPHPEI 175 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGG--CSEECCGGGCC----------------SCTTSSHH
T ss_pred ccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccc--cceeecccccC----------------CCCCcHHH
Confidence 577999999999999999998877654 34566788898532 22233322211 12223444
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEecCchHHHHhhccccccCCCchHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADI-GIAVADSTDAARSASDIVLTEPGLSVI 632 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdV-GIamg~gtd~Ak~aADivL~~~~~~~I 632 (959)
=..+.+.+.-....|.|+||..+|..|-++|++ .|++++..+. ..||+++ +++..+
T Consensus 176 ~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~--~~ad~vi--~~l~eL 232 (250)
T 4gib_A 176 FLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYENL--KKANLVV--DSTNQL 232 (250)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTTT--TTSSEEE--SSGGGC
T ss_pred HHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhHh--ccCCEEE--CChHhC
Confidence 444555555444569999999999999999997 5666644333 3589998 556655
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=95.96 E-value=0.0021 Score=66.38 Aligned_cols=102 Identities=8% Similarity=-0.057 Sum_probs=67.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHH------hCCCCCCCCCccccCccccccCCcchHHHHhhcCcee
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRR------LGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFA 566 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~------lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfa 566 (959)
++.|++.+.++.|++. +++.++|+........+.+. +|+... -..++.+.+ ....
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~--fd~i~~~~~----------------~~~~ 172 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDY--FEKTYLSYE----------------MKMA 172 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHH--CSEEEEHHH----------------HTCC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHh--CCEEEeecc----------------cCCC
Confidence 4669999999999998 99999999998887766543 333110 001111100 0112
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCch
Q 002151 567 GVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADST 613 (959)
Q Consensus 567 r~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gt 613 (959)
.-.|+-=..+.+.+.-....|.|+||+.||..|.++|+++..+.++.
T Consensus 173 KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~ 219 (229)
T 4dcc_A 173 KPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAG 219 (229)
T ss_dssp TTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCH
Confidence 22344444555555544567999999999999999999998887443
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.91 E-value=0.0088 Score=61.30 Aligned_cols=118 Identities=9% Similarity=-0.045 Sum_probs=69.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++.|+++.++|+.... +..+.+.+|+..- -..++.+++. ....-.|+-
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l~~~gl~~~--f~~~~~~~~~----------------~~~Kp~~~~ 155 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKFDLKKY--FDALALSYEI----------------KAVKPNPKI 155 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHHHHHTCGGG--CSEEC---------------------------CCH
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHhcCcHhH--eeEEEecccc----------------CCCCCCHHH
Confidence 46799999999999999999999988664 6778888888421 1122221110 011112222
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcC-ChhhhhcCCeeEEe-cCchHHHHhhccccccCCCchHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVN-DAPALKVADIGIAV-ADSTDAARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvN-DapALk~AdVGIam-g~gtd~Ak~aADivL~~~~~~~I~~ai 636 (959)
-..+.+.+.-. . .|+||+.+ |..+-++|++.... ..+... .+. |.++ +++..+...+
T Consensus 156 ~~~~~~~~~~~--~-~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~-~~~-~~~i--~~l~el~~~l 214 (220)
T 2zg6_A 156 FGFALAKVGYP--A-VHVGDIYELDYIGAKRSYVDPILLDRYDFY-PDV-RDRV--KNLREALQKI 214 (220)
T ss_dssp HHHHHHHHCSS--E-EEEESSCCCCCCCSSSCSEEEEEBCTTSCC-TTC-CSCB--SSHHHHHHHH
T ss_pred HHHHHHHcCCC--e-EEEcCCchHhHHHHHHCCCeEEEECCCCCC-CCc-ceEE--CCHHHHHHHH
Confidence 22333333322 3 89999999 99999999987553 322110 111 4444 5566666554
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.91 E-value=0.0074 Score=64.02 Aligned_cols=84 Identities=17% Similarity=0.085 Sum_probs=63.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCc----HHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceee
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQL----AIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAG 567 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~----~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar 567 (959)
.++.|++.+.++.|++.|+++.++||-.. ..+..--+++||..- ... .++-|
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~--~~~----------------------~Lilr 155 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGV--NDK----------------------TLLLK 155 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCC--STT----------------------TEEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcc--ccc----------------------eeEec
Confidence 57889999999999999999999999864 466777788999531 000 12222
Q ss_pred cChhhHHHHHHHHhhCC-CEEEEEcCCcCChhh
Q 002151 568 VFPEHKFEIVKRLQARK-HIVGMTGDGVNDAPA 599 (959)
Q Consensus 568 ~~Pe~K~~iV~~Lq~~g-~~V~m~GDGvNDapA 599 (959)
-...+|....+.+++.| .+|+++||-.+|.++
T Consensus 156 ~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 156 KDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp SSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred CCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 22356888888888754 478999999999986
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.47 E-value=0.0087 Score=63.52 Aligned_cols=84 Identities=15% Similarity=0.058 Sum_probs=61.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCc----HHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceee
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQL----AIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAG 567 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~----~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar 567 (959)
+++.|++.+.++.|++.|+++.++||-.. ..+..--+++||..-. ... ++-|
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~-~~~-----------------------Lilr 155 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVE-ESA-----------------------FYLK 155 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCS-GGG-----------------------EEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCccc-ccc-----------------------eecc
Confidence 57889999999999999999999998754 4666667789985310 001 1222
Q ss_pred cChhhHHHHHHHHhhCC-CEEEEEcCCcCChhh
Q 002151 568 VFPEHKFEIVKRLQARK-HIVGMTGDGVNDAPA 599 (959)
Q Consensus 568 ~~Pe~K~~iV~~Lq~~g-~~V~m~GDGvNDapA 599 (959)
-.-..|....+.+++.| .+|+++||-.+|.++
T Consensus 156 ~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 156 KDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp SSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred CCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 22245777777787774 478999999999985
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.45 E-value=0.015 Score=59.98 Aligned_cols=114 Identities=11% Similarity=0.090 Sum_probs=72.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.++++.|++.| ++.++|+-....+..+.+++|+..- +.+ .+... ..
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~------f~~------------------~~~~~---~~ 147 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDE------VEG------------------RVLIY---IH 147 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHH------TTT------------------CEEEE---SS
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHh------cCe------------------eEEec---CC
Confidence 68899999999999999 9999999998888888888887421 000 00111 12
Q ss_pred HHHHHHHHhh--CCCEEEEEcCCcC---ChhhhhcCCee-EEecCc-----hHHHHhh--ccccccCCCchHHHHHH
Q 002151 573 KFEIVKRLQA--RKHIVGMTGDGVN---DAPALKVADIG-IAVADS-----TDAARSA--SDIVLTEPGLSVIISAV 636 (959)
Q Consensus 573 K~~iV~~Lq~--~g~~V~m~GDGvN---DapALk~AdVG-Iamg~g-----td~Ak~a--ADivL~~~~~~~I~~ai 636 (959)
|..+.+.+.+ ....+.|+||+.| |..+-++|++- |.+..| .+..++. +|+++ +++..+...+
T Consensus 148 K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i--~~~~el~~~l 222 (231)
T 2p11_A 148 KELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTV--ERIGDLVEMD 222 (231)
T ss_dssp GGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEE--SSGGGGGGCG
T ss_pred hHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceee--cCHHHHHHHH
Confidence 2223333332 3457999999999 66666777754 333332 2223333 88888 5566655433
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=94.97 E-value=0.0044 Score=61.79 Aligned_cols=100 Identities=12% Similarity=0.081 Sum_probs=61.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC---------------CcHHHHHHHHHhCCCCCCCCCccc-cC----ccccccCC
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSAL-LG----EKKDTIVG 552 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~l-~g----~~~~~~~~ 552 (959)
++.|++.++++.|++.|+++.++|+- ....+..+.+++|+. . ..++ .+ .+.. . .
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---f-d~v~~s~~~~~~~~~-~-~ 115 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---F-DEVLICPHLPADECD-C-R 115 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---E-EEEEEECCCGGGCCS-S-S
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC---e-eEEEEcCCCCccccc-c-c
Confidence 57899999999999999999999997 456677788888884 1 1121 11 1100 0 0
Q ss_pred cchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEecCc
Q 002151 553 LPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG-IAVADS 612 (959)
Q Consensus 553 ~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~g 612 (959)
++-. ..|-+ +.+.+.-....+.|+||..+|..+-++|++- |.+..+
T Consensus 116 KP~p------~~~~~--------~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 116 KPKV------KLVER--------YLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp TTSC------GGGGG--------GC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred CCCH------HHHHH--------HHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 0000 00111 1112222233588999999999999999985 445544
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=94.68 E-value=0.023 Score=61.41 Aligned_cols=97 Identities=12% Similarity=-0.034 Sum_probs=68.1
Q ss_pred ecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHH---HHHHHH--------hCCCCCCCCCccccCccccccCCcchHH
Q 002151 489 PLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIG---KETGRR--------LGMGTNMYPSSALLGEKKDTIVGLPVDD 557 (959)
Q Consensus 489 ~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA---~~ia~~--------lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 557 (959)
..+++|.|++.++++.|++.|+++.++||-....+ ...-+. .|+. + ..++.+.+.
T Consensus 184 ~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~---~-~~~~~~~~~---------- 249 (301)
T 1ltq_A 184 CDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP---L-VMQCQREQG---------- 249 (301)
T ss_dssp GGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC---C-SEEEECCTT----------
T ss_pred ccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC---c-hheeeccCC----------
Confidence 34678999999999999999999999999875432 233334 6772 1 122222111
Q ss_pred HHhhcCceeecChhhHHHHHHHHhhCC-CEEEEEcCCcCChhhhhcCCee
Q 002151 558 LIEKADGFAGVFPEHKFEIVKRLQARK-HIVGMTGDGVNDAPALKVADIG 606 (959)
Q Consensus 558 ~i~~~~vfar~~Pe~K~~iV~~Lq~~g-~~V~m~GDGvNDapALk~AdVG 606 (959)
-.+-.|+-|..+.+.+.... ..+.|+||..+|+.|-++|++-
T Consensus 250 -------~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~ 292 (301)
T 1ltq_A 250 -------DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 292 (301)
T ss_dssp -------CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred -------CCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCe
Confidence 11334788888888885444 3468999999999999999875
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.49 E-value=0.094 Score=54.72 Aligned_cols=40 Identities=23% Similarity=0.171 Sum_probs=34.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEc---CCCcHHHHHHHHHhCCC
Q 002151 494 PRHDSAETIRRALDLGVSVKMIT---GDQLAIGKETGRRLGMG 533 (959)
Q Consensus 494 lr~~v~eaI~~l~~aGI~v~miT---GD~~~tA~~ia~~lGi~ 533 (959)
+-++..++++.+++.|+++..+| |..........+++|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 55789999999999999999999 88887777777777774
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=94.33 E-value=0.013 Score=61.75 Aligned_cols=53 Identities=21% Similarity=0.214 Sum_probs=43.9
Q ss_pred hHHHHHHHHhhCCCEEEEEcC----CcCChhhhhcCC-eeEEecCchHHHHhhccccc
Q 002151 572 HKFEIVKRLQARKHIVGMTGD----GVNDAPALKVAD-IGIAVADSTDAARSASDIVL 624 (959)
Q Consensus 572 ~K~~iV~~Lq~~g~~V~m~GD----GvNDapALk~Ad-VGIamg~gtd~Ak~aADivL 624 (959)
+|..-++.|.+.-.-|+++|| |.||.+||+.|+ +|++|+++.|..+..+++..
T Consensus 187 ~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~~~~~ 244 (246)
T 3f9r_A 187 DKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEKIIA 244 (246)
T ss_dssp SGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHHHHhc
Confidence 677777766655568999999 799999999996 99999999999887766543
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=94.00 E-value=0.0036 Score=64.64 Aligned_cols=52 Identities=15% Similarity=0.060 Sum_probs=34.6
Q ss_pred HHHHHHHHhh----CCCEEEEEcCC-cCChhhhhcCCeeEEe---cCch-HHHH---hhccccc
Q 002151 573 KFEIVKRLQA----RKHIVGMTGDG-VNDAPALKVADIGIAV---ADST-DAAR---SASDIVL 624 (959)
Q Consensus 573 K~~iV~~Lq~----~g~~V~m~GDG-vNDapALk~AdVGIam---g~gt-d~Ak---~aADivL 624 (959)
|...++.+.+ ....|.|+||+ .||..|++.|++++++ |.+. +..+ ..+|+++
T Consensus 178 k~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~ 241 (250)
T 2c4n_A 178 SPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIY 241 (250)
T ss_dssp STHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEE
T ss_pred CHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEE
Confidence 4444444433 23569999999 6999999999998554 4332 2222 3688887
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=93.99 E-value=0.07 Score=56.29 Aligned_cols=42 Identities=14% Similarity=0.011 Sum_probs=35.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEc---CCCcHHHHHHHHHhCCC
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMIT---GDQLAIGKETGRRLGMG 533 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miT---GD~~~tA~~ia~~lGi~ 533 (959)
+++-+++.++|+++++.|++++++| |..........+++|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5566899999999999999999999 77777777777788874
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=93.79 E-value=0.063 Score=56.67 Aligned_cols=40 Identities=15% Similarity=0.125 Sum_probs=34.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEc---CCCcHHHHHHHHHhCCC
Q 002151 493 PPRHDSAETIRRALDLGVSVKMIT---GDQLAIGKETGRRLGMG 533 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miT---GD~~~tA~~ia~~lGi~ 533 (959)
++ |+++++|++++++|++++++| |..........+++|+.
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~ 64 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVE 64 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 45 899999999999999999999 66777777777788874
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=93.59 E-value=0.045 Score=58.15 Aligned_cols=42 Identities=14% Similarity=0.156 Sum_probs=33.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCc---HHHHHHHHHhCCC
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQL---AIGKETGRRLGMG 533 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~---~tA~~ia~~lGi~ 533 (959)
.++-|++.++++.|++.|+++.++||-.. ......-+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 36779999999999999999999999873 3344444677885
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=92.90 E-value=0.048 Score=56.90 Aligned_cols=100 Identities=8% Similarity=-0.050 Sum_probs=64.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.+.++.|++.|+++.++|.... +..+-+.+|+..- -..++.+++.. ...-.|+-
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~--fd~i~~~~~~~----------------~~KP~p~~ 154 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREF--FTFCADASQLK----------------NSKPDPEI 154 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGG--CSEECCGGGCS----------------SCTTSTHH
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccc--ccccccccccc----------------CCCCcHHH
Confidence 5789999999999999999999997654 4455677887531 12233222211 11222332
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEecCc
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG-IAVADS 612 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~g 612 (959)
=....+.+.-..+.|.|+||..+|+.|-++|++- |+++.|
T Consensus 155 ~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g 195 (243)
T 4g9b_A 155 FLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAG 195 (243)
T ss_dssp HHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTT
T ss_pred HHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCC
Confidence 2333444444445699999999999999999863 455544
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=92.37 E-value=0.091 Score=55.63 Aligned_cols=112 Identities=13% Similarity=0.029 Sum_probs=70.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHh---CCCCCCCCCccccCccccccCCcchHHHHhhcCceeecC
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRL---GMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVF 569 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~l---Gi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~ 569 (959)
++.|++.++++.|+++|+++.++|.-+...+..+-+.+ |+..- -..++.+ + +...-.
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~--fd~i~~~-~-----------------~~~KP~ 189 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL--VDGHFDT-K-----------------IGHKVE 189 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG--CSEEECG-G-----------------GCCTTC
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhh--ccEEEec-C-----------------CCCCCC
Confidence 68899999999999999999999999887777665543 34311 1111111 1 111222
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEec-Cch---HHHHhhccccc
Q 002151 570 PEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG-IAVA-DST---DAARSASDIVL 624 (959)
Q Consensus 570 Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg-~gt---d~Ak~aADivL 624 (959)
|+-=..+.+.+.-....|.|+||..+|+.+-++|++- |.+. .+. +.....+|.++
T Consensus 190 p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i 249 (261)
T 1yns_A 190 SESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 249 (261)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEE
T ss_pred HHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEE
Confidence 3322344455544445799999999999999999974 3443 221 11223577777
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=91.42 E-value=0.095 Score=57.59 Aligned_cols=119 Identities=14% Similarity=0.097 Sum_probs=73.0
Q ss_pred cCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCC---c--chHHHHhhc--
Q 002151 490 LFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVG---L--PVDDLIEKA-- 562 (959)
Q Consensus 490 l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~---~--~~~~~i~~~-- 562 (959)
....+.|+..+.++.++++|++|+++||-.....+.+|..++..-+. +..-+.|.....-.+ . .....+.+.
T Consensus 140 ~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygI-p~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y 218 (327)
T 4as2_A 140 EPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNA-KPENVIGVTTLLKNRKTGELTTARKQIAEGKY 218 (327)
T ss_dssp CCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCC-CGGGEEEECEEEECTTTCCEECHHHHHHTTCC
T ss_pred cccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCC-CHHHeEeeeeeeeccccccccccccccccccc
Confidence 34457899999999999999999999999999999999986432222 222233322110000 0 000000000
Q ss_pred ------C--ce-----eecChhhHHHHHHHHhhCC-CEEEEEcCCc-CChhhhhc--CCeeEEe
Q 002151 563 ------D--GF-----AGVFPEHKFEIVKRLQARK-HIVGMTGDGV-NDAPALKV--ADIGIAV 609 (959)
Q Consensus 563 ------~--vf-----ar~~Pe~K~~iV~~Lq~~g-~~V~m~GDGv-NDapALk~--AdVGIam 609 (959)
+ .- -.+.-+.|..-|+...+.| ..+++.||+. .|.+||.. ++.|+++
T Consensus 219 ~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 219 DPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp CGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred cccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 0 00 1122367888887765444 4689999995 79999954 5555554
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=90.85 E-value=14 Score=46.76 Aligned_cols=87 Identities=11% Similarity=0.021 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhc---cCCCcccChhHHHHHHHHHHHHHHHHHH-hhccccccccCchhHHHHHHHHH
Q 002151 763 NGQLASAVYLQVSTISQALIFVTRS---RGWSFTERPGLLLVTAFIIAQLVATLIS-ALATSDFAGIHKIGWRWTSIIWL 838 (959)
Q Consensus 763 ~~~~~~~~~~~~~i~~~~~i~~~rs---~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 838 (959)
...+.++++.++....++ -..+. +...|.++.-++.++..++.+++..+++ +...+++.++++..|.+.+.+.+
T Consensus 899 t~~f~~lv~~~~~~~~~~--r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~ 976 (995)
T 3ar4_A 899 TMALSVLVTIEMCNALNS--LSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISL 976 (995)
T ss_dssp HHHHHHHHHHHHHHHHTT--SCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTHHHHHTTCCCCCHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHh--hccccchhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHH
Confidence 344555555555444332 22222 1123455555555555555444444443 44447788899999998888777
Q ss_pred HHHHHHHHHHHHH
Q 002151 839 YNIIIYMLLDPIK 851 (959)
Q Consensus 839 ~~~~~~~~~~~~K 851 (959)
..+++..+..+++
T Consensus 977 ~~~~~~e~~k~~~ 989 (995)
T 3ar4_A 977 PVIGLDEILKFIA 989 (995)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 7777766665553
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=89.99 E-value=0.084 Score=54.09 Aligned_cols=90 Identities=18% Similarity=0.147 Sum_probs=55.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCcHHHHH----HHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCcee--e
Q 002151 494 PRHDSAETIRRALDLGVSVKMITGDQLAIGKE----TGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFA--G 567 (959)
Q Consensus 494 lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~----ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfa--r 567 (959)
+.+++.+.++.|++.|+++.++|+-....+.. +.+..+.. ..|... ..+. .
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i--------~~~~~~---------------~~~~~~K 145 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIP--------ATNMNP---------------VIFAGDK 145 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCC--------TTTBCC---------------CEECCCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCcc--------ccccch---------------hhhcCCC
Confidence 57799999999999999999999986443222 32222221 000000 0011 1
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEec
Q 002151 568 VFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG-IAVA 610 (959)
Q Consensus 568 ~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg 610 (959)
-.|+-. .+.+++.|. +.|+||..+|..+-++|++- |.+.
T Consensus 146 P~p~~~---~~~~~~~g~-~l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 146 PGQNTK---SQWLQDKNI-RIFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp TTCCCS---HHHHHHTTE-EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred CCHHHH---HHHHHHCCC-EEEEECCHHHHHHHHHCCCeEEEEe
Confidence 123322 334455554 99999999999999999975 4443
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=87.93 E-value=1.5 Score=45.13 Aligned_cols=51 Identities=14% Similarity=0.163 Sum_probs=34.8
Q ss_pred CEEEEEcCCc-CChhhhhcCCeeEE-ecCc---h-HHH--HhhccccccCCCchHHHHHHH
Q 002151 585 HIVGMTGDGV-NDAPALKVADIGIA-VADS---T-DAA--RSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 585 ~~V~m~GDGv-NDapALk~AdVGIa-mg~g---t-d~A--k~aADivL~~~~~~~I~~ai~ 637 (959)
..|.|+||+. ||..|.+.|++-.. +..| . +.. ...+|+++ +++..+...+.
T Consensus 197 ~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~--~~l~~l~~~l~ 255 (259)
T 2ho4_A 197 EEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTC--ESFPHAVDHIL 255 (259)
T ss_dssp GGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEE--SCHHHHHHHHH
T ss_pred HHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEE--CCHHHHHHHHH
Confidence 4689999998 99999999997543 3333 1 111 23478877 66777766553
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=86.58 E-value=0.5 Score=54.48 Aligned_cols=100 Identities=9% Similarity=-0.036 Sum_probs=60.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC---CcHHHHHHHHH-hCCCCCCCCCccccCccccccCCcchHHHHhhcCceeec
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGD---QLAIGKETGRR-LGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGV 568 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD---~~~tA~~ia~~-lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~ 568 (959)
++.||+.++++.|++.|+++.++|+- .......+... .|+.. +-..++.+++. ....-
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~--~fd~i~~~~~~----------------~~~KP 161 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKM--HFDFLIESCQV----------------GMVKP 161 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHT--TSSEEEEHHHH----------------TCCTT
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhh--heeEEEecccc----------------CCCCC
Confidence 57799999999999999999999985 21111111111 13321 11223322211 01222
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEec
Q 002151 569 FPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVA 610 (959)
Q Consensus 569 ~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg 610 (959)
.|+-=..+.+.+.-....+.|+||..||..+-++|++....-
T Consensus 162 ~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 162 EPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred CHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 333334444555444456899999999999999998876553
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=85.28 E-value=0.027 Score=56.52 Aligned_cols=41 Identities=20% Similarity=0.208 Sum_probs=34.6
Q ss_pred CCCCcchHHHHHHHHhC-CCeEEEEcCCCcHHHHHHHHHhCC
Q 002151 492 DPPRHDSAETIRRALDL-GVSVKMITGDQLAIGKETGRRLGM 532 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~a-GI~v~miTGD~~~tA~~ia~~lGi 532 (959)
-++.|++.++++.|++. |+++.++|+-....+..+.+.+|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 36789999999999999 999999999887766666666665
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=83.58 E-value=0.5 Score=52.39 Aligned_cols=47 Identities=11% Similarity=0.068 Sum_probs=36.9
Q ss_pred EeecCCCCCcchHHHHHHHHhCCCeEEEEcCCC----cHHHHHHHHHhCCC
Q 002151 487 LLPLFDPPRHDSAETIRRALDLGVSVKMITGDQ----LAIGKETGRRLGMG 533 (959)
Q Consensus 487 li~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~----~~tA~~ia~~lGi~ 533 (959)
.+.-.+.+=|++.++++.|+++|+++..+|+.. ...+....+.+|+.
T Consensus 23 vl~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~ 73 (352)
T 3kc2_A 23 VLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVD 73 (352)
T ss_dssp TTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSC
T ss_pred eeEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCC
Confidence 333445666899999999999999999999876 45566666678885
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=81.33 E-value=28 Score=44.05 Aligned_cols=85 Identities=7% Similarity=-0.069 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhh---hhhccCCCcccChhHHHHHHHHHHHHHHHHHH-hhccccccccCchhHHHHHHHHH
Q 002151 763 NGQLASAVYLQVSTISQALIF---VTRSRGWSFTERPGLLLVTAFIIAQLVATLIS-ALATSDFAGIHKIGWRWTSIIWL 838 (959)
Q Consensus 763 ~~~~~~~~~~~~~i~~~~~i~---~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 838 (959)
...+.++++.++....++... ..+.. +-+..-++.++..++.+++..++| +...+++.++++..|.+.+.+.+
T Consensus 925 T~~f~~~v~~q~~~~~~~r~~~~~~~~~~---~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~ 1001 (1028)
T 2zxe_A 925 TSFFISIVVVQWADLIICKTRRNSIFQQG---MKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKPSWWFCAFPYSL 1001 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSSSCHHHHC---SCCHHHHHHHHHHHHHHHHHHHSTTHHHHTCCCCCCGGGGGTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccCCcchhccC---CcCHHHHHHHHHHHHHHHHHHHhhhHHhhhcCCCCCHHHHHHHHHHHH
Confidence 455666777776666554210 11211 233444455555555555555554 44446778888889987777666
Q ss_pred HHHHHHHHHHHH
Q 002151 839 YNIIIYMLLDPI 850 (959)
Q Consensus 839 ~~~~~~~~~~~~ 850 (959)
+.+++-.+..++
T Consensus 1002 ~~~~~~e~~k~~ 1013 (1028)
T 2zxe_A 1002 IIFLYDEMRRFI 1013 (1028)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 676666555543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 959 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 2e-28 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 4e-28 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 3e-26 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 7e-20 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 3e-19 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 2e-13 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 1e-09 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 7e-08 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 1e-07 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 2e-06 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-05 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 1e-05 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 9e-05 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 2e-04 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 2e-04 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 0.001 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 0.001 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 0.001 | |
| d2a29a1 | 136 | d.220.1.1 (A:316-451) Potassium-transporting ATPas | 0.001 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 0.003 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 109 bits (274), Expect = 2e-28
Identities = 59/156 (37%), Positives = 81/156 (51%), Gaps = 2/156 (1%)
Query: 483 EFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTN--MYPSS 540
DPPR + +I+ D G+ V MITGD RR+G+
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 541 ALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPAL 600
A G + D + + +A FA V P HK +IV+ LQ+ I MTGDGVNDAPAL
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 601 KVADIGIAVADSTDAARSASDIVLTEPGLSVIISAV 636
K A+IGIA+ T A++AS++VL + S I++AV
Sbjct: 130 KKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAV 165
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 115 bits (288), Expect = 4e-28
Identities = 32/347 (9%), Positives = 81/347 (23%), Gaps = 39/347 (11%)
Query: 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV-----DKILIEVVFGNGVDKD------- 361
+ + + + + + + + DKIL ++ G++ +
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSL-GLNSNWDMLFIV 84
Query: 362 MVILTAARASRLENQDAIDAAIVSMLADP--KEARAEITEVHFLPFNPTDKRTALTYTDK 419
I +L + + + + + + L + K
Sbjct: 85 FSIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGK 144
Query: 420 NGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPG 479
N + A ++ ++ + A+ + + +
Sbjct: 145 NNIYAALEEFATTELHVSDATLFSLKGA----LWTLAQEVYQEWYLGSKLYEDVE-KKIA 199
Query: 480 GPWEFIGLLPLFDP--PRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMG---- 533
G + P + + G + + TG LG+
Sbjct: 200 RTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFE 259
Query: 534 -----TNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVG 588
T A + +G P A + + K V
Sbjct: 260 ADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVF 319
Query: 589 MTGDGVNDAPALKVADI-GIAVA-------DSTDAARSASDIVLTEP 627
+ GD + D + + I + + +D V+
Sbjct: 320 IVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 111 bits (278), Expect = 3e-26
Identities = 52/345 (15%), Positives = 109/345 (31%), Gaps = 93/345 (26%)
Query: 20 NIPIEEVFENLKCTSD-GLSSDEVQSRLEVFGHNKL-EEKKENKILKFLGFMWNPLSWVM 77
+ EE + GL+ D+V+ LE +GHN+L E+ ++ + + L ++
Sbjct: 6 SKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRIL 65
Query: 78 EAAALMAITL---ARGGGKDVDYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAP 134
AA ++ L G + + IL +LI N+ + +E NA NA AL
Sbjct: 66 LLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPA 125
Query: 135 KAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTK 194
+ + P +L E GE L
Sbjct: 126 ATEQDKT-------------------------PLQQKLDE-----------FGEQL---- 145
Query: 195 NPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVLTSIGNFCICS 254
++ +++ G V + +
Sbjct: 146 --------------SKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFK--------- 182
Query: 255 IAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 314
IA+ + + IP +P V++ +A+G+ R++++ AI
Sbjct: 183 IAVALA-------------------------VAAIPEGLPAVITTCLALGTRRMAKKNAI 217
Query: 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVD 359
+ + ++E + + ++ + + I + G+
Sbjct: 218 VRSLPSVETLGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLP 262
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 84.4 bits (208), Expect = 7e-20
Identities = 42/154 (27%), Positives = 62/154 (40%), Gaps = 30/154 (19%)
Query: 483 EFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 542
D + + ++ +G+ V MITGD + R L + +
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-- 68
Query: 543 LGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKV 602
P K E VK+LQA+ +V GDG+NDAPAL
Sbjct: 69 ---------------------------PHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQ 100
Query: 603 ADIGIAVADSTDAARSASDIVLTEPGLSVIISAV 636
AD+GIAV +D A + DIVL L +++A+
Sbjct: 101 ADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 82.1 bits (202), Expect = 3e-19
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 17/113 (15%)
Query: 136 AKVLRDGKWSEE--DASVLVPGDIISIKLGDIIPADARLLEGDP--LKIDQSALTGESLP 191
KV R + S + A +VPGDI+ + +GD +PAD R+L L++DQS LTGES+
Sbjct: 3 GKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVS 62
Query: 192 VTKNPG-------------DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231
V K+ + ++SG+ G+ +V TGV T GK +
Sbjct: 63 VIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 68.3 bits (166), Expect = 2e-13
Identities = 28/148 (18%), Positives = 54/148 (36%), Gaps = 27/148 (18%)
Query: 377 DAIDAAIVSMLA----DPKEARAEITEVHFLPFNPTDKRTALTYTDK--NGKMHRASKGA 430
DA ++A++ + ++ R +V + FN T+K + + KGA
Sbjct: 66 DASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGA 125
Query: 431 PEQILNLA----------WNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGT------ 474
PE+IL+ +++ + + G R LG + +P+G
Sbjct: 126 PERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK 185
Query: 475 -----KDSPGGPWEFIGLLPLFDPPRHD 497
+ P F+GL+ + D H
Sbjct: 186 FDTDELNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 57.3 bits (137), Expect = 1e-09
Identities = 22/156 (14%), Positives = 45/156 (28%), Gaps = 5/156 (3%)
Query: 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVG 552
R E + + + +I+G + +Y + A I
Sbjct: 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW 134
Query: 553 LPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADS 612
+ K ++ L + M GD V D A K++D+ A
Sbjct: 135 PHSCKGT-----CSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYL 189
Query: 613 TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 648
+ R + L I + + + + ++N
Sbjct: 190 LNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.8 bits (123), Expect = 7e-08
Identities = 24/150 (16%), Positives = 46/150 (30%), Gaps = 12/150 (8%)
Query: 481 PWEFIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
+ E + R + V V +I+G +I + +L + ++
Sbjct: 70 EQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFAN 129
Query: 541 ALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVG--MTGDGVNDAP 598
L G ++ G +++K L+ + H M GDG D
Sbjct: 130 RLKFYFNGEYAGFDETQPTAESGGKG--------KVIKLLKEKFHFKKIIMIGDGATDME 181
Query: 599 ALKVADIGIAVA--DSTDAARSASDIVLTE 626
A AD I + + +T+
Sbjct: 182 ACPPADAFIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 51.4 bits (122), Expect = 1e-07
Identities = 26/213 (12%), Positives = 59/213 (27%), Gaps = 38/213 (17%)
Query: 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEVVFGNGVDKDMV 363
G + + + + + E+A + LC+D + K + +
Sbjct: 33 GEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETK-------GVYEKVGEATETAL 85
Query: 364 ILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKM 423
+ + + + + A R + + L F+ K ++ +
Sbjct: 86 TTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSR 145
Query: 424 HR-----ASKGAPEQILNL--------------AWNKADIEKKVHSVIDKFAERGLRSLG 464
KGAPE +++ K I + LR L
Sbjct: 146 AAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKE--WGTGRDTLRCLA 203
Query: 465 VARQEVPAGTKDSPGGPWE----------FIGL 487
+A ++ P ++ F+G+
Sbjct: 204 LATRDTPPKREEMVLDDSSRFMEYETDLTFVGV 236
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 47.0 bits (111), Expect = 2e-06
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 570 PEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPG 628
F+++K+ GD D PA AVAD+ ++A D VL+ G
Sbjct: 82 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHG 140
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 45.4 bits (106), Expect = 1e-05
Identities = 16/68 (23%), Positives = 25/68 (36%)
Query: 569 FPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPG 628
+ + L + V GDG ND A KV +AVA + + +D V +
Sbjct: 153 KGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEY 212
Query: 629 LSVIISAV 636
A+
Sbjct: 213 GEGGAEAI 220
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 44.8 bits (105), Expect = 1e-05
Identities = 12/58 (20%), Positives = 18/58 (31%)
Query: 569 FPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTE 626
+ K + V ++ + V GD ND L A GI + R
Sbjct: 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH 187
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 42.7 bits (99), Expect = 9e-05
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 587 VGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAV 636
+ + GD ND P ++ A++TD ++ SD V I
Sbjct: 170 ILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIF 219
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 41.7 bits (96), Expect = 2e-04
Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Query: 565 FAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVL 624
E +I K GDG ND K A + IA + + +DI +
Sbjct: 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICI 197
Query: 625 TEPGLSVIISAV 636
+ L I+ +
Sbjct: 198 EKRDLREILKYI 209
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 42.3 bits (98), Expect = 2e-04
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 570 PEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPG 628
++K V + GD ND L AVA++TD+A+S + VL
Sbjct: 209 YTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSH 267
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 39.6 bits (91), Expect = 0.001
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 591 GDGVNDAPALKVADIGIAVADSTDAARSASDIV 623
GD ND ++ A +G+AV ++ + + ++ V
Sbjct: 220 GDQENDIAMIEYAGVGVAVDNAIPSVKEVANFV 252
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 39.5 bits (91), Expect = 0.001
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 591 GDGVNDAPALKVADIGIAVADSTDAARSASDIV 623
GD +ND L+ A G+A+ ++ + +S +D V
Sbjct: 236 GDSLNDKSMLEAAGKGVAMGNAREDIKSIADAV 268
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 39.2 bits (90), Expect = 0.001
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 591 GDGVNDAPALKVADIGIAVADSTDAARSASDIVLT---EPGLSVIISAVLTSRAIF 643
GD NDA LK+A A+ ++ + + + G +I AVL + F
Sbjct: 213 GDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTYPF 268
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} Length = 136 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Score = 37.8 bits (87), Expect = 0.001
Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 4/124 (3%)
Query: 351 EVVFGNGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDK 410
E + GVD+ + A AS + +IV + R + F P
Sbjct: 6 EFIPAQGVDEKTLADAAQLASLADE-TPEGRSIVILAKQRFNLRERDVQSLHATFVPFTA 64
Query: 411 RTALTYTDKNGKMHRASKGAPEQILNLAW-NKADIEKKVHSVIDKFAERGLRSLGVARQE 469
++ ++ + + KG+ + I N V +D+ A +G L V
Sbjct: 65 QSRMSGINIDN--RMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS 122
Query: 470 VPAG 473
G
Sbjct: 123 RVLG 126
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 38.4 bits (88), Expect = 0.003
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 545 EKKDTIVGLPVDDLIEKADGFAGVFPE--HKFEIVKRLQARKHI----VGMTGDGVNDAP 598
E+K+ + +P ++ FA V + K + + + I GDG ND
Sbjct: 157 EEKEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDIS 216
Query: 599 ALKVADIGIAVADSTDAARSASDIV 623
L+ A IG+A+ + + ++A+D V
Sbjct: 217 MLRHAAIGVAMGQAKEDVKAAADYV 241
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 959 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 100.0 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.97 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.94 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.92 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.81 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.53 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.1 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.02 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.01 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.01 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.98 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.78 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.78 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.74 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.68 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.66 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.64 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.54 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.47 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.25 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.17 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.02 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 98.01 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.68 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.45 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.43 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.37 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.33 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.23 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.79 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.47 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.25 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.12 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.84 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 95.7 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.7 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 95.42 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 95.38 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.27 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 94.73 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 94.54 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 94.46 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 93.14 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 92.58 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 92.34 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 92.13 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 92.0 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 90.67 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 89.43 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 89.17 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 88.2 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 86.6 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 86.27 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 84.82 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 84.02 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.3e-37 Score=362.27 Aligned_cols=231 Identities=22% Similarity=0.298 Sum_probs=185.8
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhhCC---
Q 002151 17 DLENIPIEEVFENLKCT-SDGLSSDEVQSRLEVFGHNKLEEKK-ENKILKFLGFMWNPLSWVMEAAALMAITLARGG--- 91 (959)
Q Consensus 17 ~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~fl~~~~~~~~~~l~~aails~~~~~~~--- 91 (959)
++|+.+.||++++|+++ ++|||++||++|+++||+|++++++ ++.|..|+++|++|+.++|+++++++++++...
T Consensus 3 ~~h~~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~ 82 (472)
T d1wpga4 3 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 82 (472)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTT
T ss_pred ChhhCCHHHHHHHhCcCcccCcCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhccc
Confidence 68999999999999999 5799999999999999999998766 777889999999999999999999999987432
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEECCeEEEEecCCcCCCcEEEEeCCCeeccceE
Q 002151 92 GKDVDYHDFVGILALLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADAR 171 (959)
Q Consensus 92 ~~~~~~~~~~~I~~~l~i~~~~~~~~e~~a~~~~~~L~~~~~~~~~V~RdG~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ 171 (959)
....+|.++++|++++++|+.++++||+++++++++++++.+++ ..||++|+|.+
T Consensus 83 ~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~-------------------------~~~~~~P~d~~ 137 (472)
T d1wpga4 83 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA-------------------------TEQDKTPLQQK 137 (472)
T ss_dssp STTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC-------------------------CCCCCCHHHHH
T ss_pred ccchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc-------------------------ccccCchHHHH
Confidence 22347899999999999999999999999999999998876654 35889999987
Q ss_pred EEecCceEEeccccCCCCceeecCCCCcccccceeeeCeEEEEEEEeccchhhhhhhhhhcccCCCCcHHHHHHHHHHHH
Q 002151 172 LLEGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQQVLTSIGNFC 251 (959)
Q Consensus 172 ll~g~~l~Vdes~LTGES~pv~K~~g~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~l~~~~~~i~~~~ 251 (959)
+.+ +||+.+ .+.++|..+|..|.+|+++..+......
T Consensus 138 l~~-----------~g~~i~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 174 (472)
T d1wpga4 138 LDE-----------FGEQLS------------------KVISLICVAVWLINIGHFNDPVHGGSWI-------------- 174 (472)
T ss_dssp HHH-----------HHHHHH------------------HHHHHHHHHHHHHCCTTSSSCCSSSCSS--------------
T ss_pred HHH-----------HHHHHH------------------HHHHHHHHHHHHHHHHHHHHHHhhhhhH--------------
Confidence 654 233321 1122334455555555554444332111
Q ss_pred HHHHHHHHHHHHHHhHhccccchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHhhhCCceecchhHHhhccCccEEe
Q 002151 252 ICSIAIGMIIEIIIIYGHQERGYRVGIDNLLVILIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLC 331 (959)
Q Consensus 252 i~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~l~~~~~~l~k~~ilvk~~~~iE~Lg~v~~i~ 331 (959)
..+.+.+..+++++++++|+|||+++++++++|++||+|+|++||+++++|++|+..+.|
T Consensus 175 --------------------~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~ 234 (472)
T d1wpga4 175 --------------------RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNN 234 (472)
T ss_dssp --------------------SCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHH
T ss_pred --------------------HHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHH
Confidence 122334455677889999999999999999999999999999999999999999999999
Q ss_pred eCCC
Q 002151 332 SDKT 335 (959)
Q Consensus 332 ~DKT 335 (959)
+|||
T Consensus 235 ~~k~ 238 (472)
T d1wpga4 235 MKQF 238 (472)
T ss_dssp HHHH
T ss_pred hHHh
Confidence 9987
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=6.5e-36 Score=297.97 Aligned_cols=148 Identities=40% Similarity=0.544 Sum_probs=138.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCC--CCccccCccccccCCcchHHHHhhcCceeecC
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMY--PSSALLGEKKDTIVGLPVDDLIEKADGFAGVF 569 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~ 569 (959)
||||+|++++|+.||++||+|+|+|||+..||.++|+++||..+.. ....+.|.+.+.+...+..+.+++..+|||++
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence 9999999999999999999999999999999999999999975432 23456777777788888899999999999999
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHHH
Q 002151 570 PEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTS 639 (959)
Q Consensus 570 Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~g 639 (959)
|+||..+|+.||++|++|+|+|||+||+|||++|||||+|++|+++|+++||++|++++|+.|+++|+||
T Consensus 99 p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 99 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.97 E-value=6.6e-31 Score=251.42 Aligned_cols=124 Identities=35% Similarity=0.497 Sum_probs=109.4
Q ss_pred EEEEeecCCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcC
Q 002151 484 FIGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKAD 563 (959)
Q Consensus 484 ~lGli~l~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~ 563 (959)
..+.++++|++|+|++++|+.|+++||+++|+|||+..+|.++|++|||. .
T Consensus 12 ~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~-----------------------------~ 62 (135)
T d2b8ea1 12 GTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD-----------------------------L 62 (135)
T ss_dssp CCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------E
T ss_pred eEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh-----------------------------h
Confidence 45578999999999999999999999999999999999999999999994 3
Q ss_pred ceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 564 GFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 564 vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
+|++++|++|.++|+.+|+. ++|+|+|||.||+|||++|||||+|++++++++++||++|++++|+.|+.+|+
T Consensus 63 v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 63 VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp EECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred hccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 79999999999999999875 68999999999999999999999999999999999999999999999999874
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.94 E-value=1.2e-30 Score=294.93 Aligned_cols=314 Identities=10% Similarity=-0.038 Sum_probs=212.2
Q ss_pred cchhHHhhccCccEEeeCCCcceeeCceEEEEEEEee----ecCCCCCHH-HHHHHHHHhc---c-cccCChHHHHHHHH
Q 002151 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKILIEV----VFGNGVDKD-MVILTAARAS---R-LENQDAIDAAIVSM 386 (959)
Q Consensus 316 k~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~----~~~~~~~~~-~~l~~aa~~~---~-~~~~~~i~~ai~~~ 386 (959)
+-+.+.|+||..+++|+|||||+|.|+|++..+..+. .-..+.+.+ ++....+.+. . ...+++...+++..
T Consensus 28 ~ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (380)
T d1qyia_ 28 ELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQ 107 (380)
T ss_dssp HHHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHC
T ss_pred HHhhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhhcCCChhHHHHHHHHHHHHHHHHhhcCCCcHHHHHHH
Confidence 3456779999999999999999999999875321000 000122211 2221111111 1 12233444554433
Q ss_pred hcCc----hhhhccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHhhccchhHHHHHHHHHHHHHHccCeE
Q 002151 387 LADP----KEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNLAWNKADIEKKVHSVIDKFAERGLRS 462 (959)
Q Consensus 387 ~~~~----~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~Glr~ 462 (959)
.... .+.+..+.....+||++.+|+|++.....++....+.||+++.+.- .+....++.+.+.+++++|+|+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~~----~~~~~~~~~~~~~~~a~~~~r~ 183 (380)
T d1qyia_ 108 DEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHV----SDATLFSLKGALWTLAQEVYQE 183 (380)
T ss_dssp SSCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTTC----SCCGGGSTTCHHHHHHHHHHHH
T ss_pred HhhccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcCC----cHHHHHHHHhHHHHHHHHHHHH
Confidence 2211 2234566677789999999999866544333334445666655421 2223345567778899999999
Q ss_pred EEEEEeecCCCCCCCCCCCceEEEEeecCCCCC--cchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCc
Q 002151 463 LGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPR--HDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSS 540 (959)
Q Consensus 463 l~vA~~~~~~~~~~~~e~~l~~lGli~l~D~lr--~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~ 540 (959)
+++|++..+..+. ....++...|++..+||+| +|++++++.|+++||+++|+|||+..+|..+++++||........
T Consensus 184 l~~~~~~~~~~~~-~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~ 262 (380)
T d1qyia_ 184 WYLGSKLYEDVEK-KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADF 262 (380)
T ss_dssp HHHHHHHHHHHHC-SCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGG
T ss_pred HHHhhhccccccc-ccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcce
Confidence 9999886532211 1122334568899999955 599999999999999999999999999999999999964322223
Q ss_pred cccCcccc---------ccCCcchHHHHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCC---eeEE
Q 002151 541 ALLGEKKD---------TIVGLPVDDLIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVAD---IGIA 608 (959)
Q Consensus 541 ~l~g~~~~---------~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~Ad---VGIa 608 (959)
++++++.. ....++-.+.+..+..++|++|+||.++|+.++..++.|+|||||+||+||+|+|| |||+
T Consensus 263 i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~ 342 (380)
T d1qyia_ 263 IATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL 342 (380)
T ss_dssp EECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred EEecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEe
Confidence 33332210 01111222344555678999999999999999999999999999999999999999 9999
Q ss_pred ec-CchHHHHh----hccccccCCCchHHHHHH
Q 002151 609 VA-DSTDAARS----ASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 609 mg-~gtd~Ak~----aADivL~~~~~~~I~~ai 636 (959)
|| .|++++++ .||+++ +++..|...+
T Consensus 343 ~G~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 343 TGLKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp CBTTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred cCCCCcccHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 99 78876655 799999 7788776654
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.92 E-value=1.3e-25 Score=207.45 Aligned_cols=97 Identities=38% Similarity=0.602 Sum_probs=88.9
Q ss_pred eEEEEECCeE--EEEecCCcCCCcEEEEeCCCeeccceEEEe--cCceEEeccccCCCCceeecCCC-------------
Q 002151 135 KAKVLRDGKW--SEEDASVLVPGDIISIKLGDIIPADARLLE--GDPLKIDQSALTGESLPVTKNPG------------- 197 (959)
Q Consensus 135 ~~~V~RdG~~--~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~--g~~l~Vdes~LTGES~pv~K~~g------------- 197 (959)
.++|+|+|++ ++|+++||||||+|.|++||+|||||+|++ +.++.||||+|||||.|+.|.++
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 5899999985 789999999999999999999999999986 44588999999999999999753
Q ss_pred CcccccceeeeCeEEEEEEEeccchhhhhhhhhh
Q 002151 198 DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231 (959)
Q Consensus 198 ~~v~aGt~v~~G~~~~~V~~tG~~T~~gki~~l~ 231 (959)
+.+|+||.|.+|+++++|++||.+|.+|||++++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 5699999999999999999999999999998764
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.81 E-value=1.4e-19 Score=187.19 Aligned_cols=123 Identities=23% Similarity=0.372 Sum_probs=98.7
Q ss_pred cCChHHHHHHHHh----cCchhhhccceEeEeecCCCCCceEEEEEEec--CCeEEEEEeCCHHHHHHhhcc--------
Q 002151 375 NQDAIDAAIVSML----ADPKEARAEITEVHFLPFNPTDKRTALTYTDK--NGKMHRASKGAPEQILNLAWN-------- 440 (959)
Q Consensus 375 ~~~~i~~ai~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~--~g~~~~~~KGa~e~il~~c~~-------- 440 (959)
.+||.|.|++..+ .+....+..+++++.+||+|.+|||+++++.+ ++++.+|+|||||.|+++|+.
T Consensus 64 ~GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~ 143 (214)
T d1q3ia_ 64 AGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEI 143 (214)
T ss_dssp CSCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEE
T ss_pred ccChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCcee
Confidence 3689999998764 34556678899999999999999999999854 467888999999999999973
Q ss_pred --chhHHHHHHHHHHHHHHccCeEEEEEEeecCCCC-----------CCCCCCCceEEEEeecCCCCCcc
Q 002151 441 --KADIEKKVHSVIDKFAERGLRSLGVARQEVPAGT-----------KDSPGGPWEFIGLLPLFDPPRHD 497 (959)
Q Consensus 441 --~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~-----------~~~~e~~l~~lGli~l~D~lr~~ 497 (959)
+++.++.+.+.+++|+.+|+|||++||+.++..+ .+..|++|+|+|+++|+||||++
T Consensus 144 ~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 144 PLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp ECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred echHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 3567888999999999999999999999987543 23457899999999999999985
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.53 E-value=2.6e-15 Score=157.38 Aligned_cols=97 Identities=21% Similarity=0.338 Sum_probs=80.3
Q ss_pred hccceEeEeecCCCCCceEEEEEEecCC-----eEEEEEeCCHHHHHHhhcc----------chhHHHHHHHHHHHH--H
Q 002151 394 RAEITEVHFLPFNPTDKRTALTYTDKNG-----KMHRASKGAPEQILNLAWN----------KADIEKKVHSVIDKF--A 456 (959)
Q Consensus 394 ~~~~~~l~~~pF~s~~kr~sv~~~~~~g-----~~~~~~KGa~e~il~~c~~----------~~~~~~~~~~~i~~~--a 456 (959)
+..+++++.+||||.||||+++++.+++ .+.+|+|||||.|+++|+. .++.++.+.+.++++ +
T Consensus 116 ~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a 195 (239)
T d1wpga3 116 RQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTG 195 (239)
T ss_dssp HHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTS
T ss_pred hhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHh
Confidence 5678899999999999999999986554 3578999999999999974 245677788888876 6
Q ss_pred HccCeEEEEEEeecCCCCC----------CCCCCCceEEEEeec
Q 002151 457 ERGLRSLGVARQEVPAGTK----------DSPGGPWEFIGLLPL 490 (959)
Q Consensus 457 ~~Glr~l~vA~~~~~~~~~----------~~~e~~l~~lGli~l 490 (959)
++|+|||++|||+++.... +..|++|+|+|+++|
T Consensus 196 ~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 196 RDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp SCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred hCCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 7999999999999875432 234789999999986
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.10 E-value=8.3e-11 Score=120.22 Aligned_cols=147 Identities=22% Similarity=0.223 Sum_probs=103.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCC---Ccccc-------------------------C
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYP---SSALL-------------------------G 544 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~---~~~l~-------------------------g 544 (959)
.+.+.+.++|++|+++|++++++||.....+...++.+++...... ..... +
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 4678899999999999999999999999999999999988532110 00000 0
Q ss_pred ccc-----c----------ccCCcchHHHHhhcC---------ceeec--ChhhHHHHHHHHhhC----CCEEEEEcCCc
Q 002151 545 EKK-----D----------TIVGLPVDDLIEKAD---------GFAGV--FPEHKFEIVKRLQAR----KHIVGMTGDGV 594 (959)
Q Consensus 545 ~~~-----~----------~~~~~~~~~~i~~~~---------vfar~--~Pe~K~~iV~~Lq~~----g~~V~m~GDGv 594 (959)
... + ......+.+++++.. .+..+ ....|...++.+.++ .+.|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 000 0 000011223332221 12222 234677777776543 35699999999
Q ss_pred CChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHHH
Q 002151 595 NDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTS 639 (959)
Q Consensus 595 NDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~g 639 (959)
||.|||+.|++||||+++.+.+|++||+|+..++...+.+++++-
T Consensus 179 NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999998888888887643
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.02 E-value=4.8e-10 Score=115.00 Aligned_cols=146 Identities=19% Similarity=0.174 Sum_probs=102.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCC--CccccCcc--c-cc-----------------
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYP--SSALLGEK--K-DT----------------- 549 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~--~~~l~g~~--~-~~----------------- 549 (959)
.++.+++.+++++|++.|++++++||.+...+..++..+|+...... ...+...+ . ..
T Consensus 19 ~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (225)
T d1l6ra_ 19 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRT 98 (225)
T ss_dssp SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTS
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHhc
Confidence 45678999999999999999999999999999999999998542110 00000000 0 00
Q ss_pred ------------------cCCcchHHHHh---hc-------CceeecCh--hhHHHHHHHHhhC----CCEEEEEcCCcC
Q 002151 550 ------------------IVGLPVDDLIE---KA-------DGFAGVFP--EHKFEIVKRLQAR----KHIVGMTGDGVN 595 (959)
Q Consensus 550 ------------------~~~~~~~~~i~---~~-------~vfar~~P--e~K~~iV~~Lq~~----g~~V~m~GDGvN 595 (959)
......+.+.. .. ..+....| .+|...++.+.++ ...|+++|||.|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~n 178 (225)
T d1l6ra_ 99 SMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNN 178 (225)
T ss_dssp SCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred CcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCcc
Confidence 00011111111 10 11223334 4788888877553 234888999999
Q ss_pred ChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 596 DAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 596 DapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
|.||++.|++||||+++.+.+++.||+|...++...|.++++
T Consensus 179 D~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~ 220 (225)
T d1l6ra_ 179 DMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 220 (225)
T ss_dssp GHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred hHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHHH
Confidence 999999999999999999999999999999999888888876
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.01 E-value=1.2e-10 Score=119.48 Aligned_cols=129 Identities=17% Similarity=0.137 Sum_probs=92.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
+++|++.+.|+.||+.|++++++||.....+..+++.+|+.....-...+.........+. .....-..+..
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~--------~~~~p~~~~~~ 153 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGF--------DETQPTAESGG 153 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEE--------CTTSGGGSTTH
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccc--------eeeeeeeccch
Confidence 4789999999999999999999999999999999999999632100000000000000000 00111245688
Q ss_pred HHHHHHHHhhC--CCEEEEEcCCcCChhhhhcCCeeEEec--CchHHHHhhccccccCCCchH
Q 002151 573 KFEIVKRLQAR--KHIVGMTGDGVNDAPALKVADIGIAVA--DSTDAARSASDIVLTEPGLSV 631 (959)
Q Consensus 573 K~~iV~~Lq~~--g~~V~m~GDGvNDapALk~AdVGIamg--~gtd~Ak~aADivL~~~~~~~ 631 (959)
|.++++.++++ -..|.|+|||.||.+|++.|++|||++ ......++.||.++ .+|..
T Consensus 154 K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i--~~f~e 214 (217)
T d1nnla_ 154 KGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYI--TDFVE 214 (217)
T ss_dssp HHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEE--SCGGG
T ss_pred HHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEe--CCHHH
Confidence 99999999864 235899999999999999999999997 34566677899988 44654
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.01 E-value=2.8e-10 Score=112.46 Aligned_cols=108 Identities=24% Similarity=0.289 Sum_probs=86.1
Q ss_pred HHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhhHHHHHHH
Q 002151 500 ETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEHKFEIVKR 579 (959)
Q Consensus 500 eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~K~~iV~~ 579 (959)
.+|+.+++.|+.+.++||++...+...++++++.. ++.. ..+|...++.
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~-----------------------------~~~~--~~~K~~~l~~ 87 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL-----------------------------FFLG--KLEKETACFD 87 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE-----------------------------EEES--CSCHHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc-----------------------------cccc--cccHHHHHHH
Confidence 47999999999999999999999999999999842 1222 2345554544
Q ss_pred Hhh----CCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCC----chHHHHHHHH
Q 002151 580 LQA----RKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPG----LSVIISAVLT 638 (959)
Q Consensus 580 Lq~----~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~----~~~I~~ai~~ 638 (959)
+.+ ....|+++|||.||.|+|+.|++|+||++|.+.+|+.||+|+..++ +..+.+.|..
T Consensus 88 ~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il~ 154 (177)
T d1k1ea_ 88 LMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQ 154 (177)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHH
T ss_pred HHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCchHHHHHHHHHH
Confidence 433 2467999999999999999999999999999999999999998766 4445555543
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.98 E-value=1.2e-10 Score=119.24 Aligned_cols=148 Identities=14% Similarity=0.070 Sum_probs=106.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
+++|++.+.++.|++.|+++.++|+-....+..+.+++|+....+........+... ..........+++..|+.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~-----~~~~~~~~~~~~~~k~~~ 149 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIH-----IDWPHSCKGTCSNQCGCC 149 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCE-----EECTTCCCTTCCSCCSSC
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcce-----eccccccccccccCCHHH
Confidence 578999999999999999999999999999999999998754221111111000000 000001123466789999
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhh-ccccccCCCchHHHHHHHHHHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSA-SDIVLTEPGLSVIISAVLTSRAIFQRM 646 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~a-ADivL~~~~~~~I~~ai~~gR~~~~~i 646 (959)
|..+++.++..++.|.|+||+.||.+|+++||+++|++...+.+++. .+++- -++|+.|...+..-..+.+.+
T Consensus 150 ~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~~~~~~~ 223 (226)
T d2feaa1 150 KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLP-YQDFYEIRKEIENVKEVQEWL 223 (226)
T ss_dssp HHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEEC-CSSHHHHHHHHHTSHHHHHHH
T ss_pred HHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeee-cCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999998655555444 44332 468999988887655554443
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.78 E-value=8.1e-09 Score=108.31 Aligned_cols=71 Identities=20% Similarity=0.219 Sum_probs=58.9
Q ss_pred ecChh--hHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 567 GVFPE--HKFEIVKRLQAR----KHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 567 r~~Pe--~K~~iV~~Lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
..+|. +|...|+.+.++ ...++++|||.||.+||+.|+.|+||+++.+..|+.||+|...++=..+.++++
T Consensus 190 ~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 190 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 34554 599989888764 234899999999999999999999999999999999999987766566766664
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.78 E-value=4.9e-09 Score=110.82 Aligned_cols=70 Identities=21% Similarity=0.292 Sum_probs=59.8
Q ss_pred cChh--hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 568 VFPE--HKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 568 ~~Pe--~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
++|. .|..-++.+.+. | +.|+++|||.||.+||+.|+.||||++|++.+++.||++...++-..+.++++
T Consensus 207 i~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 207 LSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp EEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 4554 799988888764 2 35999999999999999999999999999999999999998777777777764
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.74 E-value=1.6e-08 Score=100.72 Aligned_cols=130 Identities=17% Similarity=0.161 Sum_probs=94.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.++....++.+ +.+.++..+|+.............++..... ..+..... ..........+..
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~------------~~~~~~~~~~~~~ 133 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLC--HKLEIDDS------------DRVVGYQLRQKDP 133 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEE--EEEEECTT------------SCEEEEECCSSSH
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhc--ceeeeecc------------cccccccccchhh
Confidence 4556677777665 5789999999999999999999988753210 00000000 0001233455667
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLT 638 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~~ 638 (959)
+...++.++...+-|+++|||.||.|||+.|++||||+...++.++++|++.. .++..+++++..
T Consensus 134 ~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 134 KRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred HHHHHHHhcccccceEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 77888888888999999999999999999999999998777888888898774 557778877653
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.68 E-value=3.7e-09 Score=110.96 Aligned_cols=72 Identities=21% Similarity=0.266 Sum_probs=60.8
Q ss_pred eecChh--hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 566 AGVFPE--HKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 566 ar~~Pe--~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
-.++|. .|..-++.|+++ | ..|.++|||.||.|||+.|+.|+||++|.+..|+.||+|+..++-..+..+|+
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 355664 599999888664 3 34899999999999999999999999999999999999998877777777665
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.66 E-value=9.1e-09 Score=102.77 Aligned_cols=136 Identities=21% Similarity=0.211 Sum_probs=93.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
.++.+++.+.++.++..|..+.++||.....+....++.++.... ...+..++.. ..... ......+...+.
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~ 145 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAF--ANRLIVKDGK-LTGDV-----EGEVLKENAKGE 145 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEE--EEEEEEETTE-EEEEE-----ECSSCSTTHHHH
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhh--hhhhcccccc-ccccc-----cccccccccccc
Confidence 478889999999999999999999999999999999988874211 0001000000 00000 000001111223
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHH
Q 002151 572 HKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 572 ~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai 636 (959)
-...+.+.++-..+.|.++|||.||.||++.|++|||| ++.+..++.||+|+-.+|+..|+++|
T Consensus 146 ~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 146 ILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred hhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 33334444444455689999999999999999999999 78888999999999888888877654
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.64 E-value=7.3e-09 Score=108.35 Aligned_cols=72 Identities=25% Similarity=0.265 Sum_probs=60.4
Q ss_pred eecChh--hHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 566 AGVFPE--HKFEIVKRLQAR----KHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 566 ar~~Pe--~K~~iV~~Lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
..+.|. .|..-++.|.++ ...++++|||.||.+||+.|+.||||++|++.+|+.||+|...++=..+..+++
T Consensus 178 ~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~ 255 (260)
T d2rbka1 178 ADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 255 (260)
T ss_dssp CEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHH
Confidence 445554 698888888653 345888999999999999999999999999999999999988777778888775
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.54 E-value=4.6e-08 Score=102.55 Aligned_cols=71 Identities=23% Similarity=0.280 Sum_probs=59.6
Q ss_pred ecChh--hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCchHHHHHHH
Q 002151 567 GVFPE--HKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 567 r~~Pe--~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
.++|. .|...|+.+.+. | ..|+++|||.||.|||+.|++||||++|.+.+|+.||+|+..++-..+..+|+
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred eecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 45564 688888877653 2 34888999999999999999999999999999999999998888888877764
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.47 E-value=7.3e-08 Score=101.11 Aligned_cols=65 Identities=26% Similarity=0.296 Sum_probs=51.5
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccCCCc-hHHHHHH
Q 002151 572 HKFEIVKRLQAR----KHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTEPGL-SVIISAV 636 (959)
Q Consensus 572 ~K~~iV~~Lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~-~~I~~ai 636 (959)
.|..-++.+.+. ...|+++|||.||.+||+.|+.|+||++|.+.+|+.||+|+..++- ..+..++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l 276 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLL 276 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHH
Confidence 566666666543 3469999999999999999999999999999999999999865443 3344444
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.25 E-value=1.3e-06 Score=89.02 Aligned_cols=44 Identities=14% Similarity=0.085 Sum_probs=39.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCC
Q 002151 491 FDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGT 534 (959)
Q Consensus 491 ~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 534 (959)
.+.-.+.++++|++|+++|+++++.||.+...+..+.+.+|+..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 34455789999999999999999999999999999999999853
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.17 E-value=1.5e-06 Score=89.28 Aligned_cols=68 Identities=18% Similarity=0.142 Sum_probs=53.8
Q ss_pred hhhHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhcccc-------ccCCCchHHHHHHH
Q 002151 570 PEHKFEIVKRLQAR-K---HIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIV-------LTEPGLSVIISAVL 637 (959)
Q Consensus 570 Pe~K~~iV~~Lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADiv-------L~~~~~~~I~~ai~ 637 (959)
..+|...++.+.+. | ..|.++|||.||.|||+.|+.|++|+++.+..++.||.+ -..++...|.++++
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~ 238 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHH
Confidence 35799999988765 2 348889999999999999999999999999999999954 33344555666554
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.02 E-value=8.6e-06 Score=81.83 Aligned_cols=41 Identities=17% Similarity=0.096 Sum_probs=38.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCC
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMG 533 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 533 (959)
.+-+.++++|++|+++|+.++..||.+...+..+.+++|+.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 36678999999999999999999999999999999999984
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=98.01 E-value=1.5e-05 Score=74.21 Aligned_cols=121 Identities=19% Similarity=0.291 Sum_probs=86.0
Q ss_pred CCCCHHHHHHHHHHhcccccCChHHHHHHHHhcCchh---hhccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCHH
Q 002151 356 NGVDKDMVILTAARASRLENQDAIDAAIVSMLADPKE---ARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPE 432 (959)
Q Consensus 356 ~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~---~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e 432 (959)
+|.+.++++.+|+.++..++ ||+.+||+.++.+... ...........||....+...+. .+|+ .+..|++.
T Consensus 11 ~G~~~~ell~~AA~aE~~Se-HPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~g~--~v~~G~~~ 84 (136)
T d2a29a1 11 QGVDEKTLADAAQLASLADE-TPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGIN---IDNR--MIRKGSVD 84 (136)
T ss_dssp TTCCHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEE---ETTE--EEEEECHH
T ss_pred CCCCHHHHHHHHHHHhCCCC-chHHHHHHHHHHHhcCCCccccccccccccccccccceEEEE---ECCE--EEEecHHH
Confidence 58999999999999887554 6999999998743211 11223334456666665544332 2564 45679998
Q ss_pred HHHHhhccc-hhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeecCCCCC
Q 002151 433 QILNLAWNK-ADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPLFDPPR 495 (959)
Q Consensus 433 ~il~~c~~~-~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l~D~lr 495 (959)
.+.+.+... ......+.+.+++++++|.+++.++... +++|++++.|++|
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~-------------~~~G~i~l~D~iK 135 (136)
T d2a29a1 85 AIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIALKDIVK 135 (136)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETT-------------EEEEEEEEEESSC
T ss_pred HHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEECC-------------EEEEEEEEEeecC
Confidence 776654321 2345667788899999999999999876 8999999999986
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.68 E-value=2.7e-05 Score=78.43 Aligned_cols=124 Identities=15% Similarity=0.200 Sum_probs=84.0
Q ss_pred CCCcchHHHHHHHHhCC-CeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceee-cCh
Q 002151 493 PPRHDSAETIRRALDLG-VSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAG-VFP 570 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aG-I~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar-~~P 570 (959)
++-||+.+++++|++.| +++.++||.....+..+-+..|+..- -+.++.+++ +..+ -.|
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~--fd~i~~~~~-----------------~~~~k~~p 151 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHY--FPFGAFADD-----------------ALDRNELP 151 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTT--CSCEECTTT-----------------CSSGGGHH
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccccc--ccccccccc-----------------cccccchh
Confidence 34689999999999987 89999999999999999999999532 112222211 1111 112
Q ss_pred hhHHHHHHHHhhC---CCEEEEEcCCcCChhhhhcCC---eeEEecC--chHHHHhhccccccCCCchHHHHHHH
Q 002151 571 EHKFEIVKRLQAR---KHIVGMTGDGVNDAPALKVAD---IGIAVAD--STDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 571 e~K~~iV~~Lq~~---g~~V~m~GDGvNDapALk~Ad---VGIamg~--gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
+--.+.++.+... .+.+.|+||+.+|..|-+.|+ |||+-|. ..+..+..+|+++ ++|+.+...+.
T Consensus 152 ~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 152 HIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred HHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHHH
Confidence 2223334444332 356999999999999999999 4454452 2233455689998 77888887764
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.45 E-value=1.1e-05 Score=81.32 Aligned_cols=53 Identities=19% Similarity=0.286 Sum_probs=46.5
Q ss_pred hHHHHHHHHhhC-CCEEEEEcC----CcCChhhhhcCC-eeEEecCchHHHHhhccccc
Q 002151 572 HKFEIVKRLQAR-KHIVGMTGD----GVNDAPALKVAD-IGIAVADSTDAARSASDIVL 624 (959)
Q Consensus 572 ~K~~iV~~Lq~~-g~~V~m~GD----GvNDapALk~Ad-VGIamg~gtd~Ak~aADivL 624 (959)
.|..-++.|.+. ..-|.++|| |.||.+||+.|. .|+||+++.|..|..+|++|
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhcC
Confidence 688888888654 457999999 569999999996 79999999999999999987
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.43 E-value=3.3e-05 Score=77.04 Aligned_cols=124 Identities=15% Similarity=0.117 Sum_probs=87.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++++.++.|++.|+++.++||.....+..+.+++|+... -..++.+.+. ....-.|+-
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~--f~~~~~~~~~----------------~~~kp~p~~ 156 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHL--FSEMLGGQSL----------------PEIKPHPAP 156 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG--CSEEECTTTS----------------SSCTTSSHH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhh--cccccccccc----------------ccccccchh
Confidence 4679999999999999999999999999999999999998532 1222222111 112233454
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEecC----chHHHHhhccccccCCCchHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADI-GIAVAD----STDAARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdV-GIamg~----gtd~Ak~aADivL~~~~~~~I~~ai 636 (959)
-..+.+.++-....+.|+||..+|..+-++|++ .|.+.. ..+....-+|+++ ++++.++.++
T Consensus 157 ~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~ii 223 (224)
T d2hsza1 157 FYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKIT 223 (224)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGGT
T ss_pred hHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEE--CCHHHHHHhh
Confidence 455566666666789999999999999999987 444432 2234444588888 6677766543
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.37 E-value=0.0002 Score=73.26 Aligned_cols=126 Identities=13% Similarity=0.122 Sum_probs=87.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.||+.++++.|++.|+++.++||.+...+..+-++.|+..- ....++.+++. ....-.|+.
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~-f~d~~~~~d~~----------------~~~KP~p~~ 161 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGY-KPDFLVTPDDV----------------PAGRPYPWM 161 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTC-CCSCCBCGGGS----------------SCCTTSSHH
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccc-ccccccccccc----------------cccccChHH
Confidence 5789999999999999999999999999999999999988532 11223333221 112234554
Q ss_pred HHHHHHHHhhC-CCEEEEEcCCcCChhhhhcCCee-EEecCchH---------------------------HHHhhcccc
Q 002151 573 KFEIVKRLQAR-KHIVGMTGDGVNDAPALKVADIG-IAVADSTD---------------------------AARSASDIV 623 (959)
Q Consensus 573 K~~iV~~Lq~~-g~~V~m~GDGvNDapALk~AdVG-Iamg~gtd---------------------------~Ak~aADiv 623 (959)
=.+..+.+.-. .+.|.|+||..+|..+=++|++- |++..|.. ..+.-||+|
T Consensus 162 ~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~v 241 (257)
T d1swva_ 162 CYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFT 241 (257)
T ss_dssp HHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCEE
Confidence 45556666532 45799999999999999999963 44433310 111228999
Q ss_pred ccCCCchHHHHHHH
Q 002151 624 LTEPGLSVIISAVL 637 (959)
Q Consensus 624 L~~~~~~~I~~ai~ 637 (959)
+ +++..+...|.
T Consensus 242 i--~~l~eL~~ii~ 253 (257)
T d1swva_ 242 I--ETMQELESVME 253 (257)
T ss_dssp E--SSGGGHHHHHH
T ss_pred E--CCHHHHHHHHH
Confidence 9 77888887775
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.33 E-value=9.1e-05 Score=73.68 Aligned_cols=120 Identities=16% Similarity=0.161 Sum_probs=83.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.. +-..++.+++.. .+.-.|+-
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~--~F~~i~~~~~~~----------------~~Kp~~~~ 149 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRD--SFDALASAEKLP----------------YSKPHPQV 149 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG--GCSEEEECTTSS----------------CCTTSTHH
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccc--cccccccccccc----------------cchhhHHH
Confidence 456999999999999999999999999999999999999953 122333332221 22333444
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeE-EecC--c-hHHHHhhccccccCCCchHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGI-AVAD--S-TDAARSASDIVLTEPGLSVI 632 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGI-amg~--g-td~Ak~aADivL~~~~~~~I 632 (959)
=..+.+.+.-..+.++|+||..+|..|-++|++.. ++.. . .+.-...||+++ ++|..+
T Consensus 150 ~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i--~~l~el 211 (218)
T d1te2a_ 150 YLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKL--SSLTEL 211 (218)
T ss_dssp HHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEEC--SCGGGC
T ss_pred HHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEE--CChhhC
Confidence 44566666555667999999999999999999743 3322 1 222234578877 556643
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.23 E-value=0.00054 Score=71.62 Aligned_cols=136 Identities=11% Similarity=0.054 Sum_probs=82.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++|+|+++.++.|++.|+++.++||--......+.+++|+..+.. .+.. ...+ .++..+.--... .. .....
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni--~I~s-N~l~-f~~~~~~~~~~~-~~---i~~~~ 206 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV--KVVS-NFMD-FDENGVLKGFKG-EL---IHVFN 206 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTE--EEEE-ECEE-ECTTSBEEEECS-SC---CCTTC
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCc--eEEe-eEEE-EeCCeeEeeccC-Cc---ccccc
Confidence 589999999999999999999999999999999999999864310 1111 0000 000000000000 00 01122
Q ss_pred HHHHH----HH--HhhCCCEEEEEcCCcCChhhhhc---CCeeEEec--Cc-----hHHHHhhccccccCCCchHHHHHH
Q 002151 573 KFEIV----KR--LQARKHIVGMTGDGVNDAPALKV---ADIGIAVA--DS-----TDAARSASDIVLTEPGLSVIISAV 636 (959)
Q Consensus 573 K~~iV----~~--Lq~~g~~V~m~GDGvNDapALk~---AdVGIamg--~g-----td~Ak~aADivL~~~~~~~I~~ai 636 (959)
|...+ .. .++....|.++|||+||.+|.+. ++.++++| +. -+.=+++-||||.+|.--.++..+
T Consensus 207 K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~v~~~i 286 (291)
T d2bdua1 207 KHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSI 286 (291)
T ss_dssp HHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCHHHHHH
T ss_pred CcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChhHHHHH
Confidence 22211 22 22234578999999999999874 46666665 21 123346789999988766565554
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.79 E-value=0.00023 Score=70.14 Aligned_cols=120 Identities=9% Similarity=0.002 Sum_probs=83.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.+++.+.++.+++.| ++.++|+.....+..+.+.+|+... -..++.+.+ .....|+.
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~--fd~v~~~~~------------------~~~~~p~~ 142 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHF--FDGIYGSSP------------------EAPHKADV 142 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGG--CSEEEEECS------------------SCCSHHHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccc--ccccccccc------------------cccccccc
Confidence 56789999999999775 8999999999999999999998532 112222211 12334554
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEe--cC--chHHHHhhccccccCCCchHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADI-GIAV--AD--STDAARSASDIVLTEPGLSVIISA 635 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdV-GIam--g~--gtd~Ak~aADivL~~~~~~~I~~a 635 (959)
-..+.+.++-....+.|+||+.||..|-++|++ .|++ |. ..+.....+|+++ +++..+...
T Consensus 143 ~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~~ 208 (210)
T d2ah5a1 143 IHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLAY 208 (210)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHHH
T ss_pred cchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEE--CCHHHHHHH
Confidence 445555554445679999999999999999997 4454 42 2334444589998 667776653
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.47 E-value=0.0012 Score=64.65 Aligned_cols=118 Identities=16% Similarity=0.074 Sum_probs=77.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.||+.++++.|++.|+++.++|+... .+..+-+++|+..- -..++.+++. ....-.|+-
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~--f~~i~~s~~~----------------~~~Kp~~~~ 142 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESY--FTEILTSQSG----------------FVRKPSPEA 142 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGG--EEEEECGGGC----------------CCCTTSSHH
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccc--cccccccccc----------------cccchhHHH
Confidence 4679999999999999999999998554 45677888998531 1112211111 122234554
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEecCchHHHHhhccccccCCCchHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG-IAVADSTDAARSASDIVLTEPGLSVIISA 635 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~gtd~Ak~aADivL~~~~~~~I~~a 635 (959)
=..+.+.+.-....|.|+||+.+|..+-++|++. |++..++. .+|..+ +++..+...
T Consensus 143 ~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~~----~~~~~~--~~~~dl~~l 200 (204)
T d2go7a1 143 ATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLESTY----EGNHRI--QALADISRI 200 (204)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCSC----TTEEEC--SSTTHHHHH
T ss_pred HHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCCC----CcCeec--CCHHHHHHH
Confidence 5555666655556899999999999999999985 34544432 355554 445555443
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.25 E-value=0.0036 Score=62.26 Aligned_cols=124 Identities=18% Similarity=0.143 Sum_probs=80.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
+|.||+.++++.|+ .|+++.++|+........+.+.+|+... . ..++.+.+. ....-.|+-
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~-f-d~i~~s~~~----------------~~~KP~~~~ 160 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDL-F-DSITTSEEA----------------GFFKPHPRI 160 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGG-C-SEEEEHHHH----------------TBCTTSHHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccc-c-ccccccccc----------------cccchhhHH
Confidence 57899999999997 5899999999888889999999998521 1 112211100 011112222
Q ss_pred HHHHHHHHhhCCCEEEEEcCC-cCChhhhhcCCeeEE-e--cCchHHHHhhccccccCCCchHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDG-VNDAPALKVADIGIA-V--ADSTDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDG-vNDapALk~AdVGIa-m--g~gtd~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
=..+.+.+.-....+.|+||. .||..+-++|++-.. + +.......+.+|+++ ++++.+++.++
T Consensus 161 ~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~ 227 (230)
T d1x42a1 161 FELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (230)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHH
T ss_pred HHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEE--CCHHHHHHHHH
Confidence 123334443334569999997 699999888887532 2 222233445689988 66888888775
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.12 E-value=0.0053 Score=59.13 Aligned_cols=134 Identities=16% Similarity=0.122 Sum_probs=78.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCcHH---------------HHHHHHHhCCCCCCCCCccccCccccccCCcchHHH
Q 002151 494 PRHDSAETIRRALDLGVSVKMITGDQLAI---------------GKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDL 558 (959)
Q Consensus 494 lr~~v~eaI~~l~~aGI~v~miTGD~~~t---------------A~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~ 558 (959)
+-|++.++++.|+++|+++.++|.-.... ........|+.... ..+.... .+.... .
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~cp~~----p~~~~~-~ 99 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDG---IYYCPHH----PQGSVE-E 99 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSE---EEEECCB----TTCSSG-G
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccc---eeecccc----cccccc-c
Confidence 44899999999999999999999865210 11111122221100 0000000 000000 0
Q ss_pred HhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee--EEecC--c-hHHHHhhccccccCCCchHHH
Q 002151 559 IEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG--IAVAD--S-TDAARSASDIVLTEPGLSVII 633 (959)
Q Consensus 559 i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG--Iamg~--g-td~Ak~aADivL~~~~~~~I~ 633 (959)
..+...+..-.|.-=..+.+.+.-.-+.+.||||..+|..|=++|+++ +.+.. + .+.....||+|+ +++..++
T Consensus 100 ~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl~ 177 (182)
T d2gmwa1 100 FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADLP 177 (182)
T ss_dssp GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGHH
T ss_pred ccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEE--CCHHHHH
Confidence 001112233445555556666665555699999999999999999985 44432 2 345566799999 7799888
Q ss_pred HHHH
Q 002151 634 SAVL 637 (959)
Q Consensus 634 ~ai~ 637 (959)
+.|+
T Consensus 178 ~~ik 181 (182)
T d2gmwa1 178 QAIK 181 (182)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 8775
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.84 E-value=0.00078 Score=66.21 Aligned_cols=120 Identities=8% Similarity=0.050 Sum_probs=79.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.||+.+.++.|++ ++++.++|+-....+..+.+++|+... -..++.+++. ....-.|+-
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~--f~~i~~~~~~----------------~~~KP~p~~ 142 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMR--MAVTISADDT----------------PKRKPDPLP 142 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGG--EEEEECGGGS----------------SCCTTSSHH
T ss_pred ccccchhhhhhhhcc-ccccccccccccccccccccccccccc--cccccccccc----------------ccchhhhhh
Confidence 466899999999974 799999999999999999998887531 1112221111 011223444
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEe---cCchHHHHhhccccccCCCchHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAV---ADSTDAARSASDIVLTEPGLSVII 633 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIam---g~gtd~Ak~aADivL~~~~~~~I~ 633 (959)
-..+++.++-....|.|+||..+|..+-++|++.... |..+....+.+|.++ +++..|.
T Consensus 143 ~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i--~~l~dll 204 (207)
T d2hdoa1 143 LLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRF--QKPLDIL 204 (207)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEE--SSGGGGG
T ss_pred hcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEe--CCHHHHH
Confidence 4445555543345689999999999999999887654 333334445678877 4565544
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=95.70 E-value=0.008 Score=59.58 Aligned_cols=120 Identities=14% Similarity=0.055 Sum_probs=77.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
-.+.||+.+++++|++.|+++.++|+..........+.+|+..-. +......+. .....-.|+
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~-~~~~~~~d~----------------~~~~KP~p~ 188 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDIL-ELVDGHFDT----------------KIGHKVESE 188 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCG-GGCSEEECG----------------GGCCTTCHH
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhh-hhcceeecc----------------ccccCCCcH
Confidence 357899999999999999999999999999988888888874210 100000000 011222233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEe----cC-chHHHHhhccccccCCCch
Q 002151 572 HKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAV----AD-STDAARSASDIVLTEPGLS 630 (959)
Q Consensus 572 ~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIam----g~-gtd~Ak~aADivL~~~~~~ 630 (959)
-=....+.+.-....|+|+||..+|+.+-++|++-... |+ ...-....++.++ ++|.
T Consensus 189 ~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i--~sl~ 250 (253)
T d1zs9a1 189 SYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI--TSFS 250 (253)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEE--SSGG
T ss_pred HHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEE--CChH
Confidence 22344444544456799999999999999999985443 32 2222333567776 3454
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.70 E-value=0.0038 Score=59.11 Aligned_cols=88 Identities=10% Similarity=-0.032 Sum_probs=62.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCc-HHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeec--C
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQL-AIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGV--F 569 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~-~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~--~ 569 (959)
++.|++.++++.|++.|+++.++|+-+. ..+...-+..++... ... +.+.- .
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~--~~~-----------------------~~~~~kp~ 100 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKY--FIQ-----------------------REIYPGSK 100 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGG--CSE-----------------------EEESSSCH
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhccccccc--cee-----------------------eecccCCC
Confidence 5789999999999999999999997554 566666677666321 000 11112 2
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe
Q 002151 570 PEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADI 605 (959)
Q Consensus 570 Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdV 605 (959)
|+.-.++.+.+.-..+.+.|+||..+|..+-++|++
T Consensus 101 ~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~ 136 (164)
T d1u7pa_ 101 VTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGV 136 (164)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred hHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCC
Confidence 334344555555455679999999999999999987
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.42 E-value=0.053 Score=47.64 Aligned_cols=103 Identities=17% Similarity=0.211 Sum_probs=66.7
Q ss_pred CCHHHHHHHHHHhcccccCChHHHHHHHHhcCchhhhccceEeEeecCCCCCceEEEEEEecCCeEEEEEeCCHHHHHHh
Q 002151 358 VDKDMVILTAARASRLENQDAIDAAIVSMLADPKEARAEITEVHFLPFNPTDKRTALTYTDKNGKMHRASKGAPEQILNL 437 (959)
Q Consensus 358 ~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~ 437 (959)
.++++++.+++..+... .||+..|++.++.+...........+..| .+ .+ .|+. +.-|+++.+.+.
T Consensus 10 ~~e~elL~~aaslE~~S-~HPlA~AIv~~a~~~~~~~~~~~~~~~~~----G~--Gi-----~g~~--v~vG~~~~~~~~ 75 (113)
T d2b8ea2 10 GDERELLRLAAIAERRS-EHPIAEAIVKKALEHGIELGEPEKVEVIA----GE--GV-----VADG--ILVGNKRLMEDF 75 (113)
T ss_dssp SCHHHHHHHHHHHTTTC-CSHHHHHHHHHHHTTTCCCCCCSCEEEET----TT--EE-----EETT--EEEECHHHHHHT
T ss_pred CCHHHHHHHHHHHHCcC-CCchHHHHHHHHHHhcCCCCccccceeec----cc--eE-----EeEE--EEECcHHHHHhc
Confidence 47888998888776654 56999999998754322111112222221 01 01 0121 344999987664
Q ss_pred hccchhHHHHHHHHHHHHHHccCeEEEEEEeecCCCCCCCCCCCceEEEEeec
Q 002151 438 AWNKADIEKKVHSVIDKFAERGLRSLGVARQEVPAGTKDSPGGPWEFIGLLPL 490 (959)
Q Consensus 438 c~~~~~~~~~~~~~i~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lGli~l 490 (959)
.. +..+.+.+.++++..+|..++.++... +++|++++
T Consensus 76 ~~---~~~~~~~~~~~~~~~~G~T~v~va~d~-------------~~~G~ial 112 (113)
T d2b8ea2 76 GV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAV 112 (113)
T ss_dssp TC---CCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEE
T ss_pred CC---CCCHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEE
Confidence 32 234566778889999999999999876 89999986
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=95.38 E-value=0.0027 Score=62.48 Aligned_cols=52 Identities=12% Similarity=0.279 Sum_probs=39.4
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccccccC
Q 002151 572 HKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDIVLTE 626 (959)
Q Consensus 572 ~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~ 626 (959)
+|..-++.|.++.. +.++||+.||.+|++.|+-|+||+.|. ++.+|++++.+
T Consensus 159 ~Kg~al~~l~~~~~-~i~~GDs~ND~~Mf~~~~~~~av~~g~--~~~~A~~~~~~ 210 (229)
T d1u02a_ 159 NKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGE--GETHAKFHVAD 210 (229)
T ss_dssp CHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESS--SCCCCSEEESS
T ss_pred CHHHHHHHHhcccc-ceeecCCCChHHHHhccCCeEEEEeCC--CCccCeEEcCC
Confidence 68999999988754 567899999999999996665554332 14578888843
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.27 E-value=0.018 Score=55.16 Aligned_cols=109 Identities=13% Similarity=0.026 Sum_probs=70.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.||+++.++.+++.|+++.++|+-+..+. ++-+++|+..- -..++.+++.. ...-.|+-
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~--fd~i~~~~~~~----------------~~KP~p~~ 139 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAY--FTEVVTSSSGF----------------KRKPNPES 139 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGG--EEEEECGGGCC----------------CCTTSCHH
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccc--ccccccccccc----------------ccCCCHHH
Confidence 4679999999999999999999999766554 56678887521 12222222110 01112333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEecCchHHHHhhccc
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIAVADSTDAARSASDI 622 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADi 622 (959)
-..+.+.+.- ..+.|+||..+|..|-++|++=...=++..-.++.-||
T Consensus 140 ~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 140 MLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHTC
T ss_pred HHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEEECCCCChHhhcCC
Confidence 3334444432 34899999999999999998764433566666766664
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.73 E-value=0.024 Score=56.39 Aligned_cols=124 Identities=10% Similarity=0.055 Sum_probs=80.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
++.||+.++++.|++ |+++.++|+.........-+++|+..- -..++.+.+.. .+.-.|+=
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~--fd~i~~s~~~~----------------~~KP~p~~ 169 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSY--FDAIVIGGEQK----------------EEKPAPSI 169 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGG--CSEEEEGGGSS----------------SCTTCHHH
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhcccccc--ccccccccccc----------------cchhhhhh
Confidence 467999999999985 899999999999999999999998532 12222221110 11222222
Q ss_pred HHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCee-EEec--Cc--hHHHHhhccccccCCCchHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGV-NDAPALKVADIG-IAVA--DS--TDAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGv-NDapALk~AdVG-Iamg--~g--td~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
=..+.+.+.-....+.|+||.. +|..+-+.|++. +..- .+ .+.....+|+++ +++..+...++
T Consensus 170 ~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i--~~l~eL~~ll~ 238 (247)
T d2gfha1 170 FYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALLQ 238 (247)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHHH
T ss_pred HHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEE--CCHHHHHHHHH
Confidence 1233444443345699999996 899999999985 5431 11 122233478888 66888887775
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=94.54 E-value=0.0013 Score=60.95 Aligned_cols=95 Identities=13% Similarity=-0.009 Sum_probs=61.4
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCCcH----HHHHHHHH-------hCCCCCCCCCccccCccccccCCcchHHHH
Q 002151 491 FDPPRHDSAETIRRALDLGVSVKMITGDQLA----IGKETGRR-------LGMGTNMYPSSALLGEKKDTIVGLPVDDLI 559 (959)
Q Consensus 491 ~D~lr~~v~eaI~~l~~aGI~v~miTGD~~~----tA~~ia~~-------lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i 559 (959)
+|+|.|++.+.++.+++.|+++.++||-+.. |...+... .+.. ...+..
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~-----~~~~~~--------------- 93 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP-----LVMQCQ--------------- 93 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC-----CSEEEE---------------
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCc-----EEEeec---------------
Confidence 5789999999999999999999999997632 22222110 0110 000000
Q ss_pred hhcCceeecChhhHHHHHHHHhhCC-CEEEEEcCCcCChhhhhcCCee
Q 002151 560 EKADGFAGVFPEHKFEIVKRLQARK-HIVGMTGDGVNDAPALKVADIG 606 (959)
Q Consensus 560 ~~~~vfar~~Pe~K~~iV~~Lq~~g-~~V~m~GDGvNDapALk~AdVG 606 (959)
+..--.|-.++-|..+.+.+...+ .+++|+||-..|+.|.++++|=
T Consensus 94 -~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 94 -REQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp -CCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred -ccccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 000012333567888887776654 4678899999999999998874
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=94.46 E-value=0.017 Score=56.58 Aligned_cols=91 Identities=20% Similarity=0.261 Sum_probs=64.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC----cHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecC
Q 002151 494 PRHDSAETIRRALDLGVSVKMITGDQ----LAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVF 569 (959)
Q Consensus 494 lr~~v~eaI~~l~~aGI~v~miTGD~----~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~ 569 (959)
|.|++.+.++.+++.|++|..|||.. ..|+++.-+.+|+.........+.+.+ -.
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~---------------------~~ 145 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK---------------------PG 145 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC---------------------TT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC---------------------CC
Confidence 56799999999999999999999965 467888878899864322222222211 01
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEe
Q 002151 570 PEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADI-GIAV 609 (959)
Q Consensus 570 Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdV-GIam 609 (959)
.+.|.+.|+. -.+++++||..+|..|-.+|++ +|-+
T Consensus 146 K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 146 QNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp CCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred chHHHHHHHH----cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 2335555543 3589999999999999988885 4444
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=93.14 E-value=0.045 Score=53.28 Aligned_cols=111 Identities=8% Similarity=0.002 Sum_probs=68.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
.++-||+.+.++.|++.|+++.++|+... +...-+..|+... -..++.+.+. ....-.|+
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~--f~~i~~~~~~----------------~~~KP~~~ 149 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGY--FDAIADPAEV----------------AASKPAPD 149 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGG--CSEECCTTTS----------------SSCTTSTH
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhccccc--cccccccccc----------------cccccChH
Confidence 45778999999999999999999999765 4566777887532 1122222211 11222232
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEecCchHHHHhhccccc
Q 002151 572 HKFEIVKRLQARKHIVGMTGDGVNDAPALKVADI-GIAVADSTDAARSASDIVL 624 (959)
Q Consensus 572 ~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdV-GIamg~gtd~Ak~aADivL 624 (959)
-=....+.+.-..+.|.|+||..+|..|-+.|++ .|+++.+.+ ...++.++
T Consensus 150 ~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~~--~~~~~~~~ 201 (221)
T d1o08a_ 150 IFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPED--LGDDIVIV 201 (221)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHH--HCSSSEEE
T ss_pred HHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECChhh--cccccEEc
Confidence 2122333333334568999999999999999986 455554332 22455544
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.58 E-value=0.087 Score=51.70 Aligned_cols=137 Identities=15% Similarity=0.207 Sum_probs=90.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccC----------------------
Q 002151 494 PRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIV---------------------- 551 (959)
Q Consensus 494 lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~---------------------- 551 (959)
+-||+.++++.+++. ...+++|---.+-..++|+.+|++.+.+.. .+ +++..+
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T-~~---~lD~~~~p~ee~e~ll~i~~~~~d~~~e 156 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGT-EV---DFDSIAVPEGLREELLSIIDVIASLSGE 156 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEE-BC---CGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecc-cc---cccccCCChHHHHHHHHHhhhccCccHH
Confidence 348999999999875 467778877888899999999996331110 00 111100
Q ss_pred -----------CcchHHHHhhcCceeecChhhHHHHHHHHhhC-C-CEEEEEcCCcCChhhhhcCCe--eEEec-CchHH
Q 002151 552 -----------GLPVDDLIEKADGFAGVFPEHKFEIVKRLQAR-K-HIVGMTGDGVNDAPALKVADI--GIAVA-DSTDA 615 (959)
Q Consensus 552 -----------~~~~~~~i~~~~vfar~~Pe~K~~iV~~Lq~~-g-~~V~m~GDGvNDapALk~AdV--GIamg-~gtd~ 615 (959)
..+..+++++..... -..|.++++..-+. + ..-+.+||.+.|..+|+.|.= |+|++ +|.+=
T Consensus 157 el~e~~d~~f~~~e~~~i~e~Vk~VG---gg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Y 233 (308)
T d1y8aa1 157 ELFRKLDELFSRSEVRKIVESVKAVG---AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEY 233 (308)
T ss_dssp HHHHHHHHHHHSHHHHHHHHTCBCCC---HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHH
T ss_pred HHHHHHHHHhccchHhhHHhhhcccC---CchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccc
Confidence 011111222222221 25676666544321 2 224779999999999998865 89998 99999
Q ss_pred HHhhccccccCCCchHHHHHHHH
Q 002151 616 ARSASDIVLTEPGLSVIISAVLT 638 (959)
Q Consensus 616 Ak~aADivL~~~~~~~I~~ai~~ 638 (959)
|...||+++..++...+...+..
T Consensus 234 al~eA~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 234 ALKHADVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp HHTTCSEEEECSSTHHHHHHHHH
T ss_pred cccccceEEeccchhHHHHHHHH
Confidence 99999999999998877666653
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=92.34 E-value=0.086 Score=51.16 Aligned_cols=125 Identities=7% Similarity=0.048 Sum_probs=77.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
.+.+++.+.+++++. +..++|+-....+..+-+++|+..-. +..+..+++.. ...+.-.|+.
T Consensus 85 ~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f-~~~~~~~~~~~--------------~~~~KP~~~~ 146 (222)
T d2fdra1 85 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYF-APHIYSAKDLG--------------ADRVKPKPDI 146 (222)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGT-TTCEEEHHHHC--------------TTCCTTSSHH
T ss_pred chhhhHHHHhhhccc---cceeeeecchhhhhhhhccccccccc-ceeeccccccc--------------ccccccCHHH
Confidence 467888888877754 55789999999999999999986321 11111111000 0011112222
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEecCch--------HHHHhhccccccCCCchHHHHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG-IAVADST--------DAARSASDIVLTEPGLSVIISAVL 637 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~gt--------d~Ak~aADivL~~~~~~~I~~ai~ 637 (959)
=....+.+.-..+.+.|+||..+|..+=+.|++- |++..|. +....-+|+++ +++..+..++.
T Consensus 147 ~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll~ 218 (222)
T d2fdra1 147 FLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 218 (222)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred HHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEE--CCHHHHHHHHH
Confidence 2334444444456799999999999999999973 4453321 12233489999 66877776653
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=92.13 E-value=0.023 Score=57.32 Aligned_cols=35 Identities=11% Similarity=0.189 Sum_probs=29.8
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHh
Q 002151 496 HDSAETIRRALDLGVSVKMITGDQLAIGKETGRRL 530 (959)
Q Consensus 496 ~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~l 530 (959)
|++.++|++|+++|++++.+|+....+...+++++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 78999999999999999999998866666666654
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.00 E-value=0.075 Score=51.45 Aligned_cols=109 Identities=11% Similarity=0.026 Sum_probs=70.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC----CcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeec
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGD----QLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGV 568 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~ 568 (959)
.++|++.+.+++|+++|+++.++|+- ............|+..- -..++.+++. ....-
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~--fd~i~~s~~~----------------~~~KP 158 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQH--FDFLIESCQV----------------GMIKP 158 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGG--CSEEEEHHHH----------------SCCTT
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhh--hceeeehhhc----------------cCCCC
Confidence 46789999999999999999999962 33344555555665311 0111111100 11223
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEecCchHHHHhh
Q 002151 569 FPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADI-GIAVADSTDAARSA 619 (959)
Q Consensus 569 ~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdV-GIamg~gtd~Ak~a 619 (959)
.|+--....+.++-...-+.|+||..+|..+-++|++ +|-+..+.+...+-
T Consensus 159 ~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~el 210 (222)
T d1cr6a1 159 EPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALREL 210 (222)
T ss_dssp CHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHHH
T ss_pred ChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcchHHHHH
Confidence 4555556666666566679999999999999999997 56565665554443
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=90.67 E-value=0.078 Score=51.29 Aligned_cols=122 Identities=8% Similarity=0.061 Sum_probs=80.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChhh
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPEH 572 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe~ 572 (959)
.+.+++.++++.+++.|+++.++|+-........-+..++..- -..++.+.+. ....-.|+-
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~--fd~~~~s~~~----------------~~~KP~p~~ 154 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDG--FDHLLSVDPV----------------QVYKPDNRV 154 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEESGGG----------------TCCTTSHHH
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhcccccc--ccceeeeeee----------------eccccHHHH
Confidence 4568999999999999999999999999988888888777421 1122222111 112222333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE-ec---CchHHHHhhccccccCCCchHHHH
Q 002151 573 KFEIVKRLQARKHIVGMTGDGVNDAPALKVADIGIA-VA---DSTDAARSASDIVLTEPGLSVIIS 634 (959)
Q Consensus 573 K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVGIa-mg---~gtd~Ak~aADivL~~~~~~~I~~ 634 (959)
=..+.+.+.-....|+|+||..+|+-+=++|++--. +. ...+-....+|+++ ++|..+++
T Consensus 155 ~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~ 218 (220)
T d1zrna_ 155 YELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVE 218 (220)
T ss_dssp HHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHT
T ss_pred HHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEE--CCHHHHHh
Confidence 334445554444569999999999999999997644 32 11122233578888 66777654
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=89.43 E-value=0.4 Score=46.72 Aligned_cols=124 Identities=16% Similarity=0.111 Sum_probs=78.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeecChh
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGVFPE 571 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~~Pe 571 (959)
.++-+++.+++++++ |+.+.++|..+...+...-+..|+..- -..++.+++.. ++.-.|+
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~--fd~v~~s~~~~----------------~~KP~p~ 151 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDS--FDAVISVDAKR----------------VFKPHPD 151 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEGGGGT----------------CCTTSHH
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccc--ccccccccccc----------------ccCccHH
Confidence 356789999999886 788899999999888888888887532 12233322211 1122232
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEec-CchH-HH------------------------Hhhccccc
Q 002151 572 HKFEIVKRLQARKHIVGMTGDGVNDAPALKVADIG-IAVA-DSTD-AA------------------------RSASDIVL 624 (959)
Q Consensus 572 ~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg-~gtd-~A------------------------k~aADivL 624 (959)
-=...++.+.-..+-|.|+||..+|.-+=++|++- |.+. .+.. .. ....|+++
T Consensus 152 ~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i 231 (245)
T d1qq5a_ 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV 231 (245)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE
T ss_pred HHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEE
Confidence 22234444443444699999999999999998863 3332 1111 01 11368888
Q ss_pred cCCCchHHHHHHH
Q 002151 625 TEPGLSVIISAVL 637 (959)
Q Consensus 625 ~~~~~~~I~~ai~ 637 (959)
+++..++.+|+
T Consensus 232 --~~l~el~~lv~ 242 (245)
T d1qq5a_ 232 --PALGDLPRLVR 242 (245)
T ss_dssp --SSGGGHHHHHH
T ss_pred --CCHHHHHHHHH
Confidence 67998888775
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=89.17 E-value=0.44 Score=47.40 Aligned_cols=61 Identities=30% Similarity=0.334 Sum_probs=41.0
Q ss_pred HHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCe-eEEecCc--h-HHHHhh---ccccccCCCchHHHHHH
Q 002151 574 FEIVKRLQARKHIVGMTGDGV-NDAPALKVADI-GIAVADS--T-DAARSA---SDIVLTEPGLSVIISAV 636 (959)
Q Consensus 574 ~~iV~~Lq~~g~~V~m~GDGv-NDapALk~AdV-GIamg~g--t-d~Ak~a---ADivL~~~~~~~I~~ai 636 (959)
....+.+.-..+.++|+||.. ||..+-++|++ +|.+..| + +-...+ .|+++ +++..+.++|
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii--~~l~eL~~~l 260 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAV 260 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHH
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEE--CCHHHHHHHh
Confidence 344444443456799999996 69999999997 6666432 2 212222 48898 7788888776
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.20 E-value=0.077 Score=51.79 Aligned_cols=48 Identities=21% Similarity=0.314 Sum_probs=31.6
Q ss_pred HHHHHHHHhh-CCCEEEEEcC----CcCChhhhhcCC-eeEEecCchHHHHhhcc
Q 002151 573 KFEIVKRLQA-RKHIVGMTGD----GVNDAPALKVAD-IGIAVADSTDAARSASD 621 (959)
Q Consensus 573 K~~iV~~Lq~-~g~~V~m~GD----GvNDapALk~Ad-VGIamg~gtd~Ak~aAD 621 (959)
|..-++.|.+ ...-|.++|| |-||.+||+.|+ .|+++++..|+-+ .+|
T Consensus 186 Kg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~~~~-~~~ 239 (243)
T d2amya1 186 KRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRR-ICE 239 (243)
T ss_dssp GGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHH-HHH
T ss_pred HHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHHHHH-HHH
Confidence 3333333332 3457999999 889999999997 7888877665444 444
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.60 E-value=0.2 Score=47.89 Aligned_cols=105 Identities=12% Similarity=-0.003 Sum_probs=61.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCcHH----HHHHHHHhCCCCCCCCCccccCccccccCCcchHHHHhhcCceeec
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQLAI----GKETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDDLIEKADGFAGV 568 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~~~t----A~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~i~~~~vfar~ 568 (959)
++.+++.+.++.|++.|+++.++|+..... ........++.. +-+.++.+.+. ....-
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~--~fd~i~~s~~~----------------~~~KP 160 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKM--HFDFLIESCQV----------------GMVKP 160 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHT--TSSEEEEHHHH----------------TCCTT
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHh--hccEEEecccc----------------ccchh
Confidence 367899999999999999999999754332 222222233321 01111211100 01112
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEecCchHH
Q 002151 569 FPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADI-GIAVADSTDA 615 (959)
Q Consensus 569 ~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdV-GIamg~gtd~ 615 (959)
.|+==..+.+.+.-...-+.|+||...|..+-++|++ +|.+.++.+.
T Consensus 161 ~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~~ 208 (225)
T d1zd3a1 161 EPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDTA 208 (225)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSHHHH
T ss_pred HHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCcchh
Confidence 2332234445554344568899999999999999999 6666555443
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=86.27 E-value=0.28 Score=47.67 Aligned_cols=110 Identities=23% Similarity=0.125 Sum_probs=57.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC--------cHHH-------HHHHHHhCCCCCCCCCccccCccccccCCcchHH
Q 002151 493 PPRHDSAETIRRALDLGVSVKMITGDQ--------LAIG-------KETGRRLGMGTNMYPSSALLGEKKDTIVGLPVDD 557 (959)
Q Consensus 493 ~lr~~v~eaI~~l~~aGI~v~miTGD~--------~~tA-------~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 557 (959)
.+-|++.+++++|+++|+++.++|.-. .... .+.-++.|+..+. +............
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~----~~~~~~~~~~~~~---- 119 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDM----VLACAYHEAGVGP---- 119 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSE----EEEECCCTTCCST----
T ss_pred EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccce----EEEeccccccccc----
Confidence 356899999999999999999999521 1111 1112233332110 0000000000000
Q ss_pred HHhhcCceeecChhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEec
Q 002151 558 LIEKADGFAGVFPEHKFEIVKRLQARKHIVGMTGDGVNDAPALKVADI-GIAVA 610 (959)
Q Consensus 558 ~i~~~~vfar~~Pe~K~~iV~~Lq~~g~~V~m~GDGvNDapALk~AdV-GIamg 610 (959)
.......+..-.|.-=.+..+.+.-.-..+.||||..+|..|=+.|++ +|.+.
T Consensus 120 ~~~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~ 173 (209)
T d2o2xa1 120 LAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLV 173 (209)
T ss_dssp TCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEE
T ss_pred ccccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEe
Confidence 000000011223443344455554344568999999999999999998 56663
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=84.82 E-value=0.2 Score=49.96 Aligned_cols=42 Identities=17% Similarity=0.298 Sum_probs=30.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCcHHHHHHH---HHhCCC
Q 002151 492 DPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETG---RRLGMG 533 (959)
Q Consensus 492 D~lr~~v~eaI~~l~~aGI~v~miTGD~~~tA~~ia---~~lGi~ 533 (959)
+.+=|++.++|+.|+++|++++.+|+....+..++. +++|+.
T Consensus 18 ~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 18 NVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 334478999999999999999999965543333333 456764
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=84.02 E-value=0.3 Score=48.58 Aligned_cols=42 Identities=26% Similarity=0.205 Sum_probs=31.8
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcC-ChhhhhcCCe-eEEec
Q 002151 569 FPEHKFEIVKRLQARKHIVGMTGDGVN-DAPALKVADI-GIAVA 610 (959)
Q Consensus 569 ~Pe~K~~iV~~Lq~~g~~V~m~GDGvN-DapALk~AdV-GIamg 610 (959)
+|+--..+.+.++-....|+||||..+ |..+-++|++ +|.+.
T Consensus 182 ~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~ 225 (253)
T d1wvia_ 182 EAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVT 225 (253)
T ss_dssp SHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEES
T ss_pred CcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEEC
Confidence 355445566666555667999999976 9999999998 77774
|